CcUC09G171920 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G171920
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionspindle and kinetochore-associated protein 1 homolog
LocationCicolChr09: 8250956 .. 8257163 (-)
RNA-Seq ExpressionCcUC09G171920
SyntenyCcUC09G171920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTTGGTGAGTTGGAGAGAGCAAACAACGGTTGTTTGGCAAGTCGGCGAATTGGCGACGGTAGGTGGCAGGTAGGTGGAAGCTGGTAGTGATAACCCTCTTAGTCCTCAAATCTCTTCTGGCAAGGGAAACTGGTAGAAACAATGTTTTAAAACAAATAAATAAATAAGAAGGTAGACAGTAAAGGAGAAGAAAATTATGAAAGGGTTAGAGTTTCAAATTTTAAATATTAATAGCAAATAAAATTATAAATTAATAGAAGTAAGTATCAACATTGTTCTTGAATCTGGTCAAACAGGGGACTCCCATGGATAACCACAGGGAGTCAAGGACCTGAAACCATGTTTTGTTTTTCGTCTTTGTCTTTGTTTCTCTTGTTTGTTTTTGTTTTTTGTTTTTTGTTTTTTGTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTGTTCTTTTTTGCCCTCTCTTCAAGATGTCACGTTATTTTTTTATTCTGATACATGCAGGAGCTAAGAGATATTGCAGCAACGGATGCAGTGAAAGGAAAATATTTCTTTCTTGAAACCGACATGAGAGGACCTTCATTGAAACTTGACAACACTGGAAAGGCCATACTAACTGTAAGTTTGTGAAGCATAATTCGCTCCCAGCAGTATAGTTATTTCTGGAGATAGTACCAAAAGTTCTTTCACCTAATCAATAGTTTAGATTCTCTTTGATAATAATTCTGTTCCTAGTTTTCCAACTGTTTCCTCTCAATATATTTTTTATTTTTATTTTTTATATTTTGTCCTCCTTAAAAGTGCATTTGAATTTTAAGTCAATTAAAAAACAGAATCAAGTTTTTAAAACTACCTTTTATAATTGAAAATAGTTATCAGAGGGGGCTTTTGTGTATATTATGACCAAGTACAATTCTTCCCATCAATGTTTGAAACACTGGTTTCATTTATGATTTCATATAATATAGTAATACTGAACCTAGAATACAAGTATAGATTTTTGAAACATTGTCAACTTTTCTACCTCATAGGTCCTACGTCACCTTGGACGTATAAGCGAAACTCGGATTGGACATCAACGTGTAATCTTACTATTAAAACCATCATAAATAACCTTGCATTTACTTGGACACAAGATTACAAAGTCTTGCATCACTGAAAGTCTAGCCTGTACGAAAGAGAATCAACTATATACAATTCCAACAATCCGTTTCTCAAAGATTCATCATCAGAGGCGTACATATCAATTGTTTGGAGAAGGTGAGAAATCTTTTAACCCAGAAACTACATTCATCTTACAGATAAACTGGTAGAATGCTATTGAGTTATTTGTGTTGCCTTTGTCTTTGATTATCATCAAAGGAATTCTTAAATCGAAATGAAGTGGTTGTTTTCTCTATAGTTAAATCCTTGCTTGCAATCAGTTGGAAGGAGCTTATTTCAACTTTACTTCTTTTGACTAGGCTAACGTTTTTAATCTCACTTTCTTGTGCCGTTAAGACACTTTAGTTTCTGGGACATATTTCTTATATGGTTTTGAAATCAAAGTCCTAAACAATAGGTAGTTCCGGCAGAGAGCCATAAAGAAATAAAGGCAGTTATTAAGATGTTTTTCGTTCAATAAATAGAAGACATGAGTTTGACTATATGTATCAACGTGAGTGAAAATTGATAGAATTATAAGGATCAAAATGATTGTTCTAAAAAGATTAGAAAATAAAGAGGGCGCTGGAATAAATTTGAAAGTAGTGGACTATTATCAAATAACTGAAAGCATAATAATAATGAAGTTAAGATATCAATTTGGATTTTTATTTTTTAGAACTTTGTGCACTTTTAAACTAACTTAGGGTAGTTTTTATACTTTCGATAAATCTTAAATTTAGATATTTGAAATTAATTTTTATCAAAATTGGTTAAATAATAATAATAATTTGTTAAATAATAATAATATTTATCCCGTAAGAAAAAATAAGATGCAAATATATTTCTAAAATTTATAATTGGAAGGTTAACAGATGATTAAAAGTTTTGAAAAAATCAACAGGAAACTAGCTTTTGGCATTAAATTTAAAGTTTATTGAATTTACATAGACTAATCAGAGGTGTGAAAGTACATCAACTAATATTGAGTTGATTTGAAAGTACATGTACTAAAATTAAAGGGTAATTAAATGAGTATCACTTTTAGGAATAATAATTAAGTGTATAGGAACATTTTCAAATAATTATAAATATAGGAAAATTTATCACTAATAGACTTCTGTTAGTGATATGATCTATCACTGATAGATTCTAAGAGTTGATTTAAATTTTGCTATATTTTGCAAATTTTTTTACATTTTGTTATATCTACAAATATTTTAGACTTGATTACTATATTTGTAAATATCTTGAATTAAATAATTTTCAATATACATAGACCAAAATAGTATTTTAATCTAGTAGGAAACAATGATGATTTTGGATATAATAATGAGTTTGGATGAACAGCAAAACTGGTTGAGTTAGTGCATATACCAAGAGGTCAAAGTAAAAGGAGATGACCCTTATCGAATATGGAGAGAGAGAGAGAGAAGCTATGTAGACTCTAAATTTTACTTCTAGGTTTTTCCATCCTCTCAAACTCGAAGCTAACCGTTTTATTTTCCTTTTTGTTCAATGGCAGCCTAGGAGTGTTTTATGTTGGCATCACATTTATAACCACTTTAGTAGTGGTAGATTTTAACATCTACAATAGAGGCAAGTTTGAGTGATGGTATTTTAGTTGCAAAGTGAAAGCTGTTTGCTTGTAGCGATGTTAGTGTATGTGCCAAGTTTTCCTGTAATGGTGTGTTTACCAACTTTTAAGAAAGTGGGTTTTTTCAATTACCTTTTTGCCTATTTACAATTGACAATCCGCTTGACCCTACAACATTTAGGTGTCAAAAGAAATTCATAGAAAATTAATTCTTAAGTAGGTGGTCATGAACTCTTTACCTTTGAGTCATTTATTGAAATTATGTCTCATTTTTATCACTAGACCAACCCAATTGATTGGAATGAATAGTTAGACTCAGGTTTTTTTATTACCTCCATTTGATAATTAAATTGCTACGACTTGAGATATATTTGATTATGATTGATACATGGCACCCACACCAAATGATTACAAACTTTGCCCTTCCTCAGTCTTGTACACATTATCCTCTCTACATTGCCATCAACATTGCTCACATTATCTCTAGGTACGTACTCCTTGTCCCTTATTCGACCAACTACCTTAGTGCATTTTTCATTTCATGAATGAATTCTTTCACATTCCATCTTTGACCACCCGTACAAGTCTCTTGGACAGGAGTAGTGTTGAGAACGGACAATGTTGATTTTTTGTACCATGATTTGGTCAATGTTCAAGTTGTTTCTTCGGATGTCATTTTTGATCTTGCGAGATTGATGGACAATGTTGGTTTCCTATGGTCATTTTCGACCCTTCTTTCTTGTCATGCTGCCCGCCCTGTTACGATATCATTCCAACAAGATTAAAAAAGTCAGCCTAAACCCAGGCGAACCACGGTAGGAGAGATCGATACTATCCATCCACAAAACCTCTACCGATGGTCAAGTGGAGAGAATGAAGAGAAGGAACTCTAGCCGAGAGGTGCAGAGGATCGAGGAAGGGTAAAGTTTATAAAAAGTCAATATAGGTCCCACATATTTAATCAATGGTAATTAAATTCATACCTCGGATGGGAGCAATATATAAAATTATCAAAATTTAGTTGACTATGGGATATTGATAATATAGAAAACAAACAAAGAGATATCACGTGGATAAGGAGAGTTTTGAAAGTTGAACAGTATTTTCTATAATTTAACTTACAATTAATTATTTACTTCGATAACTCTTTTTCTACTTGGAGCATTTTCTAAACGACGTGGGAGGCCTGATTCTTCAATTTCAAACTTAGAATAAATTGACACAAATCCCCAGCCTCTTAAAAACCAAAAAGTGTGTGCAGTACAGTATGGGCATCTGTCTCTTTTCCAACAATGTCATTGAACACAATGGGTGTCAAATCATCATTCATTCTTTTCTTTTTTCTTTTCCCTTTTTTTTTTTTTTTTTTTAGAAAAAAGCGATGCTAATAGACATAATCATACTGAATTTATAATCAAAGAAAAAAAAAAATCTTTGTTCTTCACACAACAGAAGAATGGCTATTGGAATGGAAAAGAAATTTACACGATTTTGATTCAAACACAAATGAGTTTGCAGAGAGAACAATCCATTTCTGAAGCCGAACAAAAGTTATAAAAGTAACCATTCAAAAGCAGACTCAAACTTGTTGAAATGAAAATGAATCCAAAAACAATGGATGGATATTACTTTAACCTTCTCCTATTTACTTCAAATTGAATCTGCAGTTACTTATTTTTACCTCCGCTGCCGGCGTTGTTTCCTCCGGCAGCCATTTCGGCTTTCCTCGCCGTCTTCTCCTGAAGAGCTTTTGCATCCCTTAACACAAAAACACACACCAATTAACTCAATCTCAAAGCTTTTAATTTCTTTTTAAGATTTTTTGTTTCTACAATTTGGCAAAAGATTTAAATTTCAAAGGAGAAAAGGTTTATGTAAACATATTATCTCGTTATATTACAAGTTTTATCTAAATTTGTGTTCAACATATCCAACTTCGAAAAGTTGTTGAATACTATTAGTTTGTACTAAAATTTTAGAAGAGTTAAATTCTTGATCAAATTCCAAAAATAATATTTTAACTTTCAAAATTTGACTTTATTTTTGAAGTACGAGAAAGAAATAAGTACGAAAGCAAGAAATTTAAAGGTGAAATGAGTCTATATCATACTAAATATAGCCTAAATTTTCAATTTAATATTTTGTGAGGTCTTGTAGACATCTTTAAATATTTAATTTGGGAAGAAAATTTACTTTTATCTATTCATTTGGGTTCAAGAGTTTTCAAACTCTACAATTTTATATTTGAGCTTAGTAGCAACATTAGCCATTCTCTCAAAATTTCGGTTAATTTCTAACGAAAGCTGATGTAACACCAATTTTCTATTAAAAACCATCCTTCTTTAGTTACAACTAAAACACAAAGTAAGATCTAAACTCAAAATCCAACTAAAGATCAAAGATGAAAGAAATGTATTAGAGAGACGGGTAAAATAAAAATTTAAGAACTAAAAGGTAAAGATTCATGTTTGTAAGGTTAATTAAAAAAATGAAAGGTTATGAAGAAGAGAGAAAGAGAGAGAGCTAATGAACCTTTGACGTCGCTGTTCAGGAGTCAACCCGTCGTTTCTTGGTTGCTTAGACTTATTTCCAGCCCTCGCTTGAGCCCTTTCTCGATCTCGCTCTCTCTGGTTTCCGCGTTCGCTTTAGTTAAAGACTAAACAAAAATCACATAAATTTCAATGAAAAAAAAAAAATCCCACAAAGATCGCTCTCTAATTATCCTAACTCCATCCCTTTTCTAGCAAAAATCATGGATCCATCAGCAGCAGCAGCTATTGAAGAAATCGAATCACTGAAATCTTCAAAACAAAATTTAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAGAAAGAAAAAAAAGAAAGAAAATCCTCTGATTCTACTTCTCTCATCCTCTGTTTCTTAAAGGAACAGAAAACAAAGAAGAAGAAATGAAGAAATGAAGGATATGAGTCATAGTGAAGAATGGAAGTTGATACTGAAAGAAAAAATGAGAGGAAACGAATGAAATTTGTTGACGATGGGAATTGAAAAGGCGAAGGATATATAAAAGGAAGAAAAGTTAAAACGTTAATCCGCCACTCGATCTCAATGGAACTCTCCAGAAACAACCCTCAGATTCCCCG

mRNA sequence

ATGCTTGGTGAGTTGGAGAGAGCAAACAACGGTTGTTTGGCAAGTCGGCGAATTGGCGACGGTAGGTGGCAGGAGCTAAGAGATATTGCAGCAACGGATGCAGTGAAAGGAAAATATTTCTTTCTTGAAACCGACATGAGAGGACCTTCATTGAAACTTGACAACACTGGAAAGGCCATACTAACTGTCCTACGTCACCTTGGACGTATAAGCGAAACTCGGATTGGACATCAACGTGTAATCTTACTATTAAAACCATCATAAATAACCTTGCATTTACTTGGACACAAGATTACAAAGTCTTGCATCACTGAAAGTCTAGCCTGTACGAAAGAGAATCAACTATATACAATTCCAACAATCCGTTTCTCAAAGATTCATCATCAGAGGCGTACATATCAATTGTTTGGAGAAGTCTTGTACACATTATCCTCTCTACATTGCCATCAACATTGCTCACATTATCTCTAGGTACGTACTCCTTGTCCCTTATTCGACCAACTACCTTAGTGCATTTTTCATTTCATGAATGAATTCTTTCACATTCCATCTTTGACCACCCGTACAAGTCTCTTGGACAGGAGTAGTGTTGAGAACGGACAATGTTGATTTTTTGTACCATGATTTGGTCAATGTTCAAGTTGTTTCTTCGGATGTCATTTTTGATCTTGCGAGATTGATGGACAATGTTGGTTTCCTATGGTCATTTTCGACCCTTCTTTCTTGTCATGCTGCCCGCCCTCCGCTGCCGGCGTTGTTTCCTCCGGCAGCCATTTCGGCTTTCCTCGCCGTCTTCTCCTGAAGAGCTTTTGCATCCCTTTGACGTCGCTGTTCAGGAGTCAACCCGTCGTTTCTTGGTTGCTTAGACTTATTTCCAGCCCTCGCTTGAGCCCTTTCTCGATCTCGCTCTCTCTGGTTTCCGCGTTCGCTTTAGTTAAAGACTAAACAAAAATCACATAAATTTCAATGAAAAAAAAAAAATCCCACAAAGATCGCTCTCTAATTATCCTAACTCCATCCCTTTTCTAGCAAAAATCATGGATCCATCAGCAGCAGCAGCTATTGAAGAAATCGAATCACTGAAATCTTCAAAACAAAATTTAAAAAAAAAAAAAAAAAAAAAAAGAAAGAAAAGAAAGAAAGAAAAAAAAGAAAGAAAATCCTCTGATTCTACTTCTCTCATCCTCTGTTTCTTAAAGGAACAGAAAACAAAGAAGAAGAAATGAAGAAATGAAGGATATGAGTCATAGTGAAGAATGGAAGTTGATACTGAAAGAAAAAATGAGAGGAAACGAATGAAATTTGTTGACGATGGGAATTGAAAAGGCGAAGGATATATAAAAGGAAGAAAAGTTAAAACGTTAATCCGCCACTCGATCTCAATGGAACTCTCCAGAAACAACCCTCAGATTCCCCG

Coding sequence (CDS)

ATGCTTGGTGAGTTGGAGAGAGCAAACAACGGTTGTTTGGCAAGTCGGCGAATTGGCGACGGTAGGTGGCAGGAGCTAAGAGATATTGCAGCAACGGATGCAGTGAAAGGAAAATATTTCTTTCTTGAAACCGACATGAGAGGACCTTCATTGAAACTTGACAACACTGGAAAGGCCATACTAACTGTCCTACGTCACCTTGGACGTATAAGCGAAACTCGGATTGGACATCAACGTGTAATCTTACTATTAAAACCATCATAA

Protein sequence

MLGELERANNGCLASRRIGDGRWQELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISETRIGHQRVILLLKPS
Homology
[Close]
BLAST of CcUC09G171920 vs. NCBI nr
Match: XP_038877293.1 (spindle and kinetochore-associated protein 1 homolog [Benincasa hispida])

HSP 1 Score: 128.6 bits (322), Expect = 2.5e-26
Identity = 64/75 (85.33%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ +  W+   ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE
Sbjct: 195 KKLAENLWEKALELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 254

Query: 76  TRIGHQRVILLLKPS 88
           TRIGHQRVILLLKPS
Sbjct: 255 TRIGHQRVILLLKPS 269

[Close]
BLAST of CcUC09G171920 vs. NCBI nr
Match: XP_008458015.1 (PREDICTED: spindle and kinetochore-associated protein 1 homolog isoform X3 [Cucumis melo])

HSP 1 Score: 128.3 bits (321), Expect = 3.3e-26
Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 0 

Query: 13  LASRRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGR 72
           +  +++ +  W+   ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRH+GR
Sbjct: 192 IPKKKLAENLWEKALELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHVGR 251

Query: 73  ISETRIGHQRVILLLKPS 88
           ISETRIGHQRVILLLKPS
Sbjct: 252 ISETRIGHQRVILLLKPS 269

[Close]
BLAST of CcUC09G171920 vs. NCBI nr
Match: KAG6593001.1 (Spindle and kinetochore-associated protein 1-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 126.7 bits (317), Expect = 9.7e-26
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ + +W+   ELRDIA T+AVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE
Sbjct: 232 KKLAENQWEKALELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 291

Query: 76  TRIGHQRVILLLKPS 88
           TRIGHQRVILLLKPS
Sbjct: 292 TRIGHQRVILLLKPS 306

[Close]
BLAST of CcUC09G171920 vs. NCBI nr
Match: XP_023515285.1 (spindle and kinetochore-associated protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023515286.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita pepo subsp. pepo] >XP_023515287.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 126.7 bits (317), Expect = 9.7e-26
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ + +W+   ELRDIA T+AVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE
Sbjct: 194 KKLAENQWEKALELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 253

Query: 76  TRIGHQRVILLLKPS 88
           TRIGHQRVILLLKPS
Sbjct: 254 TRIGHQRVILLLKPS 268

[Close]
BLAST of CcUC09G171920 vs. NCBI nr
Match: XP_022960263.1 (spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960264.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960265.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960266.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960267.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_022960268.1 spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata])

HSP 1 Score: 126.7 bits (317), Expect = 9.7e-26
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ + +W+   ELRDIA T+AVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE
Sbjct: 194 KKLAENQWEKALELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 253

Query: 76  TRIGHQRVILLLKPS 88
           TRIGHQRVILLLKPS
Sbjct: 254 TRIGHQRVILLLKPS 268

[Close]
BLAST of CcUC09G171920 vs. ExPASy Swiss-Prot
Match: Q9LZZ7 (Spindle and kinetochore-associated protein 1 homolog OS=Arabidopsis thaliana OX=3702 GN=At3g60660 PE=2 SV=1)

HSP 1 Score: 108.2 bits (269), Expect = 4.7e-23
Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 0 

Query: 14  ASRRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRI 73
           + +++ +  W+   +LRDI    AVKGK+FFLETDM+GPSLKLDNTGKAILTVLRHLGRI
Sbjct: 196 SKQKLAENLWEKALKLRDIVTEQAVKGKHFFLETDMKGPSLKLDNTGKAILTVLRHLGRI 255

Query: 74  SETRIGHQRVILLLKP 87
           SETRIG  RVI+L+KP
Sbjct: 256 SETRIGQNRVIILMKP 271

[Close]
BLAST of CcUC09G171920 vs. ExPASy Swiss-Prot
Match: Q7XAM0 (Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=Os07g0484500 PE=2 SV=1)

HSP 1 Score: 99.8 bits (247), Expect = 1.7e-20
Identity = 47/73 (64.38%), Postives = 59/73 (80.82%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ +  W+   ELRDIAA ++VKG++FFLETD++GP LKLD TGKAILTVLRHLGR  E
Sbjct: 202 KKLSEDTWEKALELRDIAARESVKGRHFFLETDIKGPGLKLDTTGKAILTVLRHLGRFQE 261

Query: 76  TRIGHQRVILLLK 86
           TRIGH RV +L K
Sbjct: 262 TRIGHHRVFILSK 274

[Close]
BLAST of CcUC09G171920 vs. ExPASy Swiss-Prot
Match: B8B624 (Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. indica OX=39946 GN=OsI_26011 PE=3 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 2.2e-20
Identity = 47/73 (64.38%), Postives = 59/73 (80.82%), Query Frame = 0 

Query: 16  RRIGDGRWQE---LRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ +  W++   LRDIAA ++VKGK+FFLETD++GP LKLD TGKAILTVLRHLGR  E
Sbjct: 202 KKLSEDTWEKALVLRDIAARESVKGKHFFLETDIKGPGLKLDTTGKAILTVLRHLGRFQE 261

Query: 76  TRIGHQRVILLLK 86
           TRIGH RV +L K
Sbjct: 262 TRIGHHRVFILSK 274

[Close]
BLAST of CcUC09G171920 vs. ExPASy Swiss-Prot
Match: B4FGS2 (Spindle and kinetochore-associated protein 1 homolog OS=Zea mays OX=4577 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 6.3e-20
Identity = 47/73 (64.38%), Postives = 57/73 (78.08%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ +  W+   ELRDIAA+ AVKG +FFLE D++GP LKLDNTGKAILTVLRHLGR  E
Sbjct: 199 KKLSEDTWEKALELRDIAASGAVKGNHFFLEADIKGPGLKLDNTGKAILTVLRHLGRFHE 258

Query: 76  TRIGHQRVILLLK 86
            RIGH RV +L K
Sbjct: 259 VRIGHHRVFILSK 271

[Close]
BLAST of CcUC09G171920 vs. ExPASy TrEMBL
Match: A0A1S3C6Z1 (spindle and kinetochore-associated protein 1 homolog isoform X3 OS=Cucumis melo OX=3656 GN=LOC103497553 PE=3 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.6e-26
Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 0 

Query: 13  LASRRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGR 72
           +  +++ +  W+   ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRH+GR
Sbjct: 192 IPKKKLAENLWEKALELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHVGR 251

Query: 73  ISETRIGHQRVILLLKPS 88
           ISETRIGHQRVILLLKPS
Sbjct: 252 ISETRIGHQRVILLLKPS 269

[Close]
BLAST of CcUC09G171920 vs. ExPASy TrEMBL
Match: A0A6J1H8L1 (spindle and kinetochore-associated protein 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111461060 PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 4.7e-26
Identity = 62/75 (82.67%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ + +W+   ELRDIA T+AVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE
Sbjct: 194 KKLAENQWEKALELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 253

Query: 76  TRIGHQRVILLLKPS 88
           TRIGHQRVILLLKPS
Sbjct: 254 TRIGHQRVILLLKPS 268

[Close]
BLAST of CcUC09G171920 vs. ExPASy TrEMBL
Match: A0A6J1KRI3 (spindle and kinetochore-associated protein 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111498018 PE=3 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 6.1e-26
Identity = 61/75 (81.33%), Postives = 69/75 (92.00%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ + +W+   ELRDIA T+AVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE
Sbjct: 194 KKLAENQWEKALELRDIATTEAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 253

Query: 76  TRIGHQRVILLLKPS 88
           TRIGHQR+ILLLKPS
Sbjct: 254 TRIGHQRIILLLKPS 268

[Close]
BLAST of CcUC09G171920 vs. ExPASy TrEMBL
Match: A0A6J1DLG8 (spindle and kinetochore-associated protein 1 homolog OS=Momordica charantia OX=3673 GN=LOC111021632 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.0e-24
Identity = 60/75 (80.00%), Postives = 66/75 (88.00%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ +  W    ELRDIA  +AVKGKYFFLETDM+GPSLKLDNTGKAILTVLRHLGRISE
Sbjct: 195 KKLAENLWDKALELRDIATMEAVKGKYFFLETDMKGPSLKLDNTGKAILTVLRHLGRISE 254

Query: 76  TRIGHQRVILLLKPS 88
           TRIGHQRVILLLKPS
Sbjct: 255 TRIGHQRVILLLKPS 269

[Close]
BLAST of CcUC09G171920 vs. ExPASy TrEMBL
Match: A0A1R3I7S5 (Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14316 PE=3 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 4.8e-23
Identity = 56/74 (75.68%), Postives = 66/74 (89.19%), Query Frame = 0 

Query: 16  RRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRISE 75
           +++ +  W+   ELRDIA T+AVKGK+FFLE+DM+GPSLKLDNTGKAILTVLRHLGRISE
Sbjct: 199 KKLAENLWERALELRDIATTEAVKGKHFFLESDMKGPSLKLDNTGKAILTVLRHLGRISE 258

Query: 76  TRIGHQRVILLLKP 87
           TRIGH RVI+LLKP
Sbjct: 259 TRIGHHRVIILLKP 272

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BLAST of CcUC09G171920 vs. TAIR 10
Match: AT3G60660.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1395 (InterPro:IPR009829); Has 131 Blast hits to 131 proteins in 44 species: Archae - 0; Bacteria - 0; Metazoa - 83; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). )

HSP 1 Score: 108.2 bits (269), Expect = 3.3e-24
Identity = 52/76 (68.42%), Postives = 63/76 (82.89%), Query Frame = 0 

Query: 14  ASRRIGDGRWQ---ELRDIAATDAVKGKYFFLETDMRGPSLKLDNTGKAILTVLRHLGRI 73
           + +++ +  W+   +LRDI    AVKGK+FFLETDM+GPSLKLDNTGKAILTVLRHLGRI
Sbjct: 196 SKQKLAENLWEKALKLRDIVTEQAVKGKHFFLETDMKGPSLKLDNTGKAILTVLRHLGRI 255

Query: 74  SETRIGHQRVILLLKP 87
           SETRIG  RVI+L+KP
Sbjct: 256 SETRIGQNRVIILMKP 271

The following BLAST results are available for this feature:
BLAST of CcUC09G171920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038877293.12.5e-2685.33spindle and kinetochore-associated protein 1 homolog [Benincasa hispida][more]
XP_008458015.13.3e-2680.77PREDICTED: spindle and kinetochore-associated protein 1 homolog isoform X3 [Cucu... [more]
KAG6593001.19.7e-2682.67Spindle and kinetochore-associated protein 1-like protein, partial [Cucurbita ar... [more]
XP_023515285.19.7e-2682.67spindle and kinetochore-associated protein 1 homolog [Cucurbita pepo subsp. pepo... [more]
XP_022960263.19.7e-2682.67spindle and kinetochore-associated protein 1 homolog [Cucurbita moschata] >XP_02... [more]
BLAST of CcUC09G171920 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9LZZ74.7e-2368.42Spindle and kinetochore-associated protein 1 homolog OS=Arabidopsis thaliana OX=... [more]
Q7XAM01.7e-2064.38Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. japo... [more]
B8B6242.2e-2064.38Spindle and kinetochore-associated protein 1 homolog OS=Oryza sativa subsp. indi... [more]
B4FGS26.3e-2064.38Spindle and kinetochore-associated protein 1 homolog OS=Zea mays OX=4577 PE=2 SV... [more]
BLAST of CcUC09G171920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3C6Z11.6e-2680.77spindle and kinetochore-associated protein 1 homolog isoform X3 OS=Cucumis melo ... [more]
A0A6J1H8L14.7e-2682.67spindle and kinetochore-associated protein 1 homolog OS=Cucurbita moschata OX=36... [more]
A0A6J1KRI36.1e-2681.33spindle and kinetochore-associated protein 1 homolog OS=Cucurbita maxima OX=3661... [more]
A0A6J1DLG82.0e-2480.00spindle and kinetochore-associated protein 1 homolog OS=Momordica charantia OX=3... [more]
A0A1R3I7S54.8e-2375.68Uncharacterized protein OS=Corchorus capsularis OX=210143 GN=CCACVL1_14316 PE=3 ... [more]
BLAST of CcUC09G171920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G60660.13.3e-2468.42unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1395... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009829Spindle and kinetochore-associated protein 1PFAMPF07160SKA1coord: 23..77
e-value: 5.3E-22
score: 78.9
IPR009829Spindle and kinetochore-associated protein 1PANTHERPTHR28573SPINDLE AND KINETOCHORE-ASSOCIATED PROTEIN 1coord: 22..86
IPR042031SKA1 microtubule binding domainGENE3D1.10.10.1890coord: 7..83
e-value: 8.7E-17
score: 63.3

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G171920.1CcUC09G171920.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0051301 cell division
biological_process GO:0007059 chromosome segregation
biological_process GO:0000278 mitotic cell cycle
biological_process GO:0031110 regulation of microtubule polymerization or depolymerization
cellular_component GO:0072686 mitotic spindle
cellular_component GO:0000940 outer kinetochore
cellular_component GO:0005876 spindle microtubule
molecular_function GO:0008017 microtubule binding