CcUC09G171740 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G171740
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 8125753 .. 8129923 (+)
RNA-Seq ExpressionCcUC09G171740
SyntenyCcUC09G171740
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGAGTAGTTATTCCAATGGAAAACCCTTTGTTTGGGAAAAGGGTGAGTTGGAGAGCCATGGCTGCGACACGGTCGTCCGACACCGGTAGTTTGGGTACAAGACGACAGTAGTTGGATTCTAGACGAAAGCCACCACCGGAGAGATGGTGAAAGTCGAGGTTGGACGAAGACTCGCAACGGTAAGCGAAACGGTGTCGCCTTGGAGAAATTGGATGATGGGTTTGTGGGAGTGTTGGGGGCAAATGAGATTGCCGGCGAGAGGAAGGTAGTGAGTGAGTATGAGAGAAAGTGAGTGTTTTAGGTTTAGAAGAACATTATTGTTAGTGCTAATTGAGTTATGGTAGAAATAAAGGCGAGTGATGGGAGGAGATTGAAGGAGAATTATGTCAAAGATTGTGAGAGGAAGAAACTTAGGTGCACTTGGAGAAGGTAGAGGAGCAACTCTACAAATCTCAACTATCTTCATACATTCGTGGTTATCCTCCATTGGAAGGAGCTCAATTCCTTCACCCAAATAAAAATTAAAAAAAATAAAAAAAAATTAAAACAAAACAAATATAATAGGTCTCACATATTTGAACAACGTGGCACCTCCTAAAATTGTAAGAAAACTCTTGTGGGTGGGGTATTCTATGTAAGGGTCTGCTTGTTCTATCCTTGTTTTAAAAAAAAATTAAAACAAAACAAATATAATAGGTCTCACATATTTGAACAACGTGGCACCTCCTAAAATTGTAAGAAAACTCTTGTGGGTGGGGTATTCTATGTAAGGGTCTGCTTGTTCTATCCTTGTTTTAAAAAAAAATTAAAACAAAACAAATATAATAGGTCTCACATATTTGAACAACGTGGCACCTCCTAAAATTGTAAGAAAACTCTTGTGGGTGGGGTATTCTATGTAAGGGTCTGCTTGTTCTATCCTTGTTTTAAAAAAAAATTAAAACAAAACAAATATAATAGGTCTCACATATTTGAACAACGTGGCACCTCCTAAAATTGTAAGAAAACTCTTGTGGGTGGGGTATTCTATGTAAGGGTCTGCTTGTTCTATCCTTGTTTTAAAAAAAAATTAAAACAAAAAAAAGAAAAAAAATAATGGCCTTTAATTTGTTTTTTTTTAATTTTTTTTTTTTTTTCTTTTTTTTTTTTTTAATAAAAAAAAAAGTAAAGAGATGTTTTTCAAACCATTATATCATGGGAATAAGTGATTACTTGCATTCCATGTAAATGTGTTTTCATAGTATACACTAGATATAGGTCTTTAGTACTCACTTCGCATAAATTTGAGTTATGTGTTGGAGTGCGTATTTAGCGTCACGATCGTATTTCTCAAACTGTGTGGCACCACGATTTACACTTTGATCATGGTCAACCGTAAGAGAAACTCAAGTTGCAATCTACTCTTTGCTCGACTCTCTTTGATGCTTCATTGGATCTTAGGTGAGGTTCTTACATCTTCAACACCGAACTTAACTCATATAGAAATGAGATTCATTTGGGCATACATGTCACCCATATAGGTATTTTTCTACATTTGCGACTCTACCTGACTTGCCTCTACTAATTTAGACCAAATCCTAAGGCTCTATCTTGTCCATGTACTAGGCTAAGGACAATACAATACAAGGTTGCATCTCATATCACCATCTTGTAGGATCTCACGTCAACACGGCCCTACACTTCTACATCACTTCAGGACTTCACAAGGATGAGTTCAAACCCTTCACTCAACACTTGCTTGTCACCATTGCACTATATCTACACTTATGGGGTCACAACCTACCCTCTTTCAGTATGGTTTGTGATATTTAGCGTTCAACTTTGTGCACGTATGATAGGACAAAGATTTGCTCTGCTATGCATCTGATGCTTTTGATATACCCAAAAACCAATAACAAAGCAGAAAGTACAACACTGTGAAGATGAAGAGTTAACAAGCTTGAGGTACTCCTTACTTTTTTCCTTCAGTTATAATTACACATTCTATAAGGGAACAATTTCTACATTTTGAACAACTAAATAATTCCCTTCTATTAATGATTCATTCAACAACTATGTATATCAAAGGCTCGTGATCGTAATTGCCTCGTAAGTATTTAAAAGAAAGTTTGTTTTTTTTTTTTTTACACATTTCTCTTAAGATTTTGCAACATCAACTCTCATTTCTATGTCCCGAAGAAGCCATTAGAACCCCAACAGCCACCATAAACATTAACAACATGTTGATGAGCAAAGCATATGTTTTTTTGGATGATCTACGGTATTCTCCAAATAGAAGGATTCCCCAAAACGTGCTCACCAGTGGAAGCGCCTGAATTTAAACACAACATAATGTAAATGATTTTCTTTTAGTTTAACAATATTTGACACGGGGATTCAATTTCTAACTTTTGCGTTGAAGATATATTTATATATTGTGAGTAACTGAGCTAAGCTCGCGTTAGCAATGATATATTCACAAAATATCAACTAAACTAAATATCAATCAAAATACACCAATTATTTGGTATTTTTTCTCATCGAAATATGGAGACTAAAATAAACCAAAACTAAAGTATAAAGACTCAAATAAATATTTTTAAAATATGAAAATCAAAATGATCCAAAGTCAAAAGTATAAAAAAATTCACCTGGACAGCATCTGCTGCTGCATAACCAGCAGCTTGGCCACCCATAAACTGCAAGCCATTGCCAAAGCCACACAAGAATCCAGCCAACAAGGCCCATCCTCTACCATTCCAGTCATTCACATATGCCTTCAATGTTGTTTTTGGCAAGTTAAGTACGGGGCGGTAAAGGAAGACGATGTTGAGAACGATGGCTATGATGAAACAAGAGACCGAAAAGTAGAAAAACGCGGTGTAGACCGACAAGTGCTGAACGCCGTCGTTTAGAGTGTGCCATTGATCGTTTGTTGCCAAATTGAATGCTGGTGAGAAGAGAGAAAAGCAAACTCCGGCAAAGAAAGTTATGAACAATCCAATTAATGTGCTTTTACCAAATACCTGCAACATCACAATCTTATTTGAGTTTTGTTTTTATTTGGTCAAGTTTGAAAATCTATACTTTTAATTTTTTTTATGATTAAATACTCATTTTCTGTTTTTAGTGTGTTAATGTCTATTAATTAAATTTTAGAAATTAAAAGAATAATAATTAATAAGTTTTCCTAATTTTTCGTCGGGTTATTTTCAAATATAGCAAAATGAGCCAAAATATTTACAAATATAACAAAATGTCGATAGACAGCGATAGACACTAATAGACTACTATCATCTATCACTCTCTGTCAATAATAGATGCGGATAGATATGTATCATTGTCCATCACGGATGAACCGTGACATTTTTATTATATTTGAAAATATTTCCAACAATTTTGTCATATTCTTTTTCATCCGTATTAAAATTATTTTTAACATCTCTTTACTTAATTATATTAATTAAGTTAATTAACAAAAAGATAACACCCAAGACCAAAGTGAGCATCGGCAAAAACTTAAGGGTAAATGCGTAATATATATTGAAATTTAAAAATCAAATAAAAACTAAACTCAAAACTTCACGGTATAAAAATGGTATAAAAATGTAATGAAATTACATACTTTAATGGATCTTCTATTCTCAAGTTGAACAAGAAAATCTGCAGTCCCAGCTTTTGCCTTCACTAAAGAATAATTAGCACTTTCCAACTCTGCTGATTCAATTATACATAGATCAGATGTCAAAATAACACCAAAAGTCACAAACTTCTATATTATATGATATCCAAATTAAAAAATTTACCCTTGATTGATTTAGGAGGAGCATCAGTTGTGCTGTCATAATTGGATCAAGGAAGAATTTTATTATCAAAAAAACATATATATATATATATATGAGTAGTTAAAAAATCAATCAATATTTCTATTAAAAGAACACACAAATCCAATAAAATACATAAACCAAGATGTTGAATGAAAACAATCAAACAAACTATATAACATGAACAAGATCATAAGATCAACAAAACAACGAAACACGTCGATTGGTACGAAAACATACTTGGATTTTTCGTTCGTATCGGCGGACAAACTTTCGAGTTTTGCTTTGTTATCAGCTGTGTTGGATGAGTGAACAGCAGAGCCAAGACAAACAGCAGTCAAAAAGCAAGCAACACCAGGGAAAA

mRNA sequence

ATGGTGAACGAAAGCCACCACCGGAGAGATGGTGAAAGTCGAGGTTGGACGAAGACTCGCAACGGTAAGCGAAACGGTGTCGCCTTGGAGAAATTGGATGATGGGTTTGTGGGAGTGTTGGGGGCAAATGAGATTGCCGGCGAGAGGAAGATTTTGCAACATCAACTCTCATTTCTATGTCCCGAAGAAGCCATTAGAACCCCAACAGCCACCATAAACATTAACAACATGTTGATGAGCAAAGCATATGTTTTTTTGGATGATCTACGGTATTCTCCAAATAGAAGGATTCCCCAAAACTACGGGGCGGTAAAGGAAGACGATGTTGAGAACGATGGCTATGATGAAACAAGAGACCGAAAAGTAGAAAAACGCGGTGTAGACCGACAACTGTGTTGGATGAGTGAACAGCAGAGCCAAGACAAACAGCAGTCAAAAAGCAAGCAACACCAGGGAAAA

Coding sequence (CDS)

ATGGTGAACGAAAGCCACCACCGGAGAGATGGTGAAAGTCGAGGTTGGACGAAGACTCGCAACGGTAAGCGAAACGGTGTCGCCTTGGAGAAATTGGATGATGGGTTTGTGGGAGTGTTGGGGGCAAATGAGATTGCCGGCGAGAGGAAGATTTTGCAACATCAACTCTCATTTCTATGTCCCGAAGAAGCCATTAGAACCCCAACAGCCACCATAAACATTAACAACATGTTGATGAGCAAAGCATATGTTTTTTTGGATGATCTACGGTATTCTCCAAATAGAAGGATTCCCCAAAACTACGGGGCGGTAAAGGAAGACGATGTTGAGAACGATGGCTATGATGAAACAAGAGACCGAAAAGTAGAAAAACGCGGTGTAGACCGACAACTGTGTTGGATGAGTGAACAGCAGAGCCAAGACAAACAGCAGTCAAAAAGCAAGCAACACCAGGGAAAA

Protein sequence

MVNESHHRRDGESRGWTKTRNGKRNGVALEKLDDGFVGVLGANEIAGERKILQHQLSFLCPEEAIRTPTATININNMLMSKAYVFLDDLRYSPNRRIPQNYGAVKEDDVENDGYDETRDRKVEKRGVDRQLCWMSEQQSQDKQQSKSKQHQGK
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 114..130
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..22
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 95..153

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G171740.1CcUC09G171740.1mRNA