CcUC09G171650 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G171650
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 8055531 .. 8058501 (-)
RNA-Seq ExpressionCcUC09G171650
SyntenyCcUC09G171650
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTCAGTTTCTTAAAGATGAAAGTCAGTACCGCACTGGCATTCGCCGGAGTAATGTCGATCACCTTACCGTTTGAGCTCAAATTAGGCTCAAATACAGACCAAGGAATCCCTGTTGTACAATGGATCACTGCATCATACTTCTTACCTGATGGACTCTTCAAGGCTGCTCCTTCTGAGGTTTTGTAGTCTATGACCTCATCTGCGCCCAAGCTCTTCACAAGCTCGATGTTTCGAGCACCGCAAGTAGCGGTCACGTGTGTGTTTCCTAGCTTTGCTAGCTGAACCGCGTAGTGCCCAACACCACCTGAGGCAGCAGTGATGAGAATGTTTGATTGAGGGCCATTTCTATCAAGCTTGATCCCAGCAGCTTGGGTGAGAGCTTGATGTGCTGTCAATGCTGCAACGGGCAGGGCAGCGCTATCGGCTGCTGTCACTTCGGGCGGCCTATAAACGGTTGAAACTTCCTTTGCTACAGCATATTCAGCAAGTCCACCTCCAGTCTATCATTTTCATACAAAAAGAATTGTAAAGATGAACACATACGTATATCATGAATTAATGATGTAATTCTTGAGCATTAGAACTTTCCTCATGTGGATCAATAAGATATTGGTGTGAGGACTCGGTCATATACCAAATATTAAGCATGTGAAAGGAGATACGTTTTGAAGGCTAAATATACCAAGTGGTCCTTAAGATTTTACATAATTCTCAATCTAATCCTTAATCTTTTAAAATTCTGGACTAATGCCTAAAAAGAACTCAACTAGAGGTGTTCAGCGCCCATTGACTTCATAAGGTTGTGTTAAATAACTCCACCCCACCAACTTTCAGCAATGTTAACTATTGAAGTTTATACAAATTTTATCAAGGAACTTCCATCTTTCCCTCTTTCTCTCTCCCACTCTCTAATTTTTCCTAACTACAGATTAAACAGCTATGCACCCAAACAGAGACTTCCTAACTCCAACATATCAACTACAGACTTCAGAACTCGACCAAGGTTATTCCATAAAAGCATGGTTAAATTTTGTCAACCAAAAAGGAAAGTTGGTGTATCATTAAATTATTGTTTTATTAACAAATTCAGATACATAAAGTGTCCTGAGGTGCTACATGACACATGAAACTCGAATCATCTATCAACAAAATACATTACAGGCAGAAATGTTGATACTTATAACTTTATCAGAAAAGTCATGATTTTCTTTTGTGATCTTGTTCATGGTTAAGTTTAGATTAACTGTGGAAATTAAGGGTGAGTAAAATCTTACAGCGTGGTTAAGAAATGTCACAACTTTGTCCCCAACTTTTAAGCTTTTCACCCCTTCTCCAACCTTTAAGACTTCTCCAGCCACATCAGTACCTGTTTTCACATTCATAACCAAGATTTCTGGTCTGTGAATATCTTGGTTTTCATGACAAAAAGGTATTAACAATGCTCTAGCTCTCACCTCATTCAAAACCTAACTTATTCAACTACTCAACATGAATCTCCTACTGAATCACCTCTATATTTTCGCAAATTGAAAAGAAGAATACTTTTTTCATTTTTCAAAAAAATAAATAGCTAACTATAAAATTTTTAGTGGTAGATCCTTGTGACCAATTAGGAGGTAAGTTTTTCCCGTGGTCCTTTAAGAATCAATATAAATTTGAGGTGCTTTTATCATGTACATCCATCAATAAGACTTTCAGTCACATTGTGACGGTCTCATCGAATAATTTCTCATATTAACTTCAGTATAACAAGCTTTGAAGTCGAGCAAAGAATCAGCGACACACATGGAATATGAGGAAAGTTGCGAGGATAAAAGGGACGTATGACTCCATTCTGAATTTTCCAATCAAATGGATTGAGACTAACTGCTTCTACTTTCAGCAAAACCTCATCATCTTTAGGTCTTGGAATGGGAATTTCTGCATGCTGCATTAACGTAAAACATACACATTTCAACTACAAATGAATCCTAAGATTCATAACATAAACGATGTGAAAGGTTTAACCATCAACTTTGAGATAGTAATAAGTGTAGTCTTACCCCCACTAAGTTTAACCAATTGGTTCAACTTCCTTATGATTTGGACTGTTGAGTTTTTATAACTCCAAGTTTAAAATATTAAAGAAAATGTTAACGAGATGCTTTAGTCCCTAATGTTTAAGTGTTTTTCTCAATTTGGTCCCTAATCGTTTAAGAGTCCCAATTTCACCCCTTATGTATAGAGACTTGTTTTCAATTTAATTCTTTCAAATCACTTAGGGGTGTTTAGACTACCGACATGAGTTTGGTGGAGTTGGTTAAATAATCAACTCTTTGTTTTGTCCATCAACTTCACAACAGCATGTTTAAATAACTACACTTCACCAAAGAATTTCCATCAACTTCAACCATGTTCAATATTGATATTCGCATATTTATAATCAAGGAACTCCATGTTCCAATTTGTTTCCAATAACTCCACTAAAAAGAAAAGAAAAAAAAGTCAAACCTTCTAATCTCAGAACTCCAAGTTAAACTCTGCACCACAAACACATACTTTTTAAACCTAGATGAAACAACTCTGCACCCGAAACACATATCATTCCGGACCTATTTGCTTGGCCATCCAAATTCTATTTTATATTTTTAGATTCAGTGAGTTGAAACAATTTTTGTTATGTTTTCAATGTATTCCAATTTTAAAAGGGCAGAATTATAGTAAAGCAAAATTTCATAAAGTAAATTGTTACATATAAATCATACAAAATGTATAGAGATCAACCGAGAGAACAAGACATGAAAATGAAAAATAGGAACCTTGAGGGCAGCCGATCCGCCGCCGTAGGCTTCATAGAGAACTGCCTTCATAAGCCTGGAAGTGGTGGAAGCCGCCATAGCCCAATCCTTGGGAATGAGGAGCTTAAAAATAAACTACTGCAATTCTCTGCTGTGGAGCATTCCAAATTTCAGAAATTAAATAAGCTTTGA

mRNA sequence

ATGTCAATGAAAGTCAGTACCGCACTGGCATTCGCCGGAGTAATGTCGATCACCTTACCGTTTGAGCTCAAATTAGGCTCAAATACAGACCAAGGAATCCCTGTTGTACAATGGATCACTGCATCATACTTCTTACCTGATGGACTCTTCAAGGCTGCTCCTTCTGAGTCTATGACCTCATCTGCGCCCAAGCTCTTCACAAGCTCGATGTTTCGAGCACCGCAAGTAGCGGTCACAGATCAACCGAGAGAACAAGACATGAAAATGAAAAATAGGAACCTTGAGGGCAGCCGATCCGCCGCCGTAGGCTTCATAGAGAACTGCCTTCATAAGCCTGGAAGTGGTGGAAGCCGCCATAGCCCAATCCTTGGGAATGAGGAGCTTAAAAATAAACTACTGCAATTCTCTGCTGTGGAGCATTCCAAATTTCAGAAATTAAATAAGCTTTGA

Coding sequence (CDS)

ATGTCAATGAAAGTCAGTACCGCACTGGCATTCGCCGGAGTAATGTCGATCACCTTACCGTTTGAGCTCAAATTAGGCTCAAATACAGACCAAGGAATCCCTGTTGTACAATGGATCACTGCATCATACTTCTTACCTGATGGACTCTTCAAGGCTGCTCCTTCTGAGTCTATGACCTCATCTGCGCCCAAGCTCTTCACAAGCTCGATGTTTCGAGCACCGCAAGTAGCGGTCACAGATCAACCGAGAGAACAAGACATGAAAATGAAAAATAGGAACCTTGAGGGCAGCCGATCCGCCGCCGTAGGCTTCATAGAGAACTGCCTTCATAAGCCTGGAAGTGGTGGAAGCCGCCATAGCCCAATCCTTGGGAATGAGGAGCTTAAAAATAAACTACTGCAATTCTCTGCTGTGGAGCATTCCAAATTTCAGAAATTAAATAAGCTTTGA

Protein sequence

MSMKVSTALAFAGVMSITLPFELKLGSNTDQGIPVVQWITASYFLPDGLFKAAPSESMTSSAPKLFTSSMFRAPQVAVTDQPREQDMKMKNRNLEGSRSAAVGFIENCLHKPGSGGSRHSPILGNEELKNKLLQFSAVEHSKFQKLNKL
Homology
[Close]
BLAST of CcUC09G171650 vs. NCBI nr
Match: RYR69311.1 (hypothetical protein Ahy_A03g015866 isoform C [Arachis hypogaea])

HSP 1 Score: 67.0 bits (162), Expect = 1.6e-07
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0 

Query: 13 GVMSITLPFELKLGSNTDQGIPVVQWITASYFLPDGLFKAAPS 56
          GV SIT P  +KLG   D GIPVVQ ITASYFLPDGLF+AAPS
Sbjct: 30 GVKSITFPLSVKLGLKVDHGIPVVQCITASYFLPDGLFRAAPS 72

[Close]
BLAST of CcUC09G171650 vs. ExPASy TrEMBL
Match: A0A7C8Z3M0 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 8.1e-10
Identity = 36/52 (69.23%), Postives = 41/52 (78.85%), Query Frame = 0 

Query: 4   KVSTALAFAGVMSITLPFELKLGSNTDQGIPVVQWITASYFLPDGLFKAAPS 56
           +V+TA+   GV SITLPF LK GS  DQG+PV  W+TASYFLPDGLFKA PS
Sbjct: 107 EVTTAVG-PGVKSITLPFSLKFGSKVDQGMPVALWMTASYFLPDGLFKATPS 157

[Close]
BLAST of CcUC09G171650 vs. ExPASy TrEMBL
Match: A0A445E1V8 (Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A03g015866 PE=4 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 7.5e-08
Identity = 32/43 (74.42%), Postives = 34/43 (79.07%), Query Frame = 0 

Query: 13 GVMSITLPFELKLGSNTDQGIPVVQWITASYFLPDGLFKAAPS 56
          GV SIT P  +KLG   D GIPVVQ ITASYFLPDGLF+AAPS
Sbjct: 30 GVKSITFPLSVKLGLKVDHGIPVVQCITASYFLPDGLFRAAPS 72

[Close]
BLAST of CcUC09G171650 vs. ExPASy TrEMBL
Match: A0A7N0UTW4 (Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1)

HSP 1 Score: 64.3 bits (155), Expect = 4.9e-07
Identity = 28/42 (66.67%), Postives = 32/42 (76.19%), Query Frame = 0 

Query: 13 GVMSITLPFELKLGSNTDQGIPVVQWITASYFLPDGLFKAAP 55
          GVMS T P  L+ GS  DQG+P+VQWITASYF  +GLF AAP
Sbjct: 57 GVMSTTTPLALRFGSKVDQGMPIVQWITASYFFSEGLFNAAP 98

The following BLAST results are available for this feature:
BLAST of CcUC09G171650 vs. NCBI nr
Match NameE-valueIdentityDescription
RYR69311.11.6e-0774.42hypothetical protein Ahy_A03g015866 isoform C [Arachis hypogaea][more]
BLAST of CcUC09G171650 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC09G171650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A7C8Z3M08.1e-1069.23Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1[more]
A0A445E1V87.5e-0874.42Uncharacterized protein OS=Arachis hypogaea OX=3818 GN=Ahy_A03g015866 PE=4 SV=1[more]
A0A7N0UTW44.9e-0766.67Uncharacterized protein OS=Kalanchoe fedtschenkoi OX=63787 PE=4 SV=1[more]
BLAST of CcUC09G171650 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G171650.1CcUC09G171650.1mRNA