CcUC09G170660 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G170660
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Unknown protein
Location	CicolChr09: 6943400 .. 6945350 (-)
RNA-Seq Expression	CcUC09G170660
Synteny	CcUC09G170660

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAACATGTTACTTAACAAATATAAAAATAATAGGTTGTATAATAAATAAATAATGGAGGTATGAACTTTTGACTTTTATAAGAAAGGAGCAATTGTTTTAAATAGAAAAATTATTAAAAATATTTTCAAATATAACAAGATGTCACAATAATAAATACGAATGGATTACACAAATTATTAACAAAATTTGATTTGTTTTTTAAAACGTTAATTTTACTATTTTTTCCCTTCATAGTTGGAAGGGATGCATGGAAGAAACTCCCCATAAAAAGCTTCAAAACTACTTAGTTTTATTGAGAATGTAGGACTAAAAATCAATTAAATAATATTACAAAATTTGAAAATAATAGAAATATTTTTGAACTAATATTTCATTACGAATTTGAAAAAAAGAATTAGAATTTAATTCGGATAATTTTAAAAGTTAAAATTTAGTACTCATAGTTTGATAAAACTTCAAAAATAATTTATAACTTCAATTTAAACTTGAAATAAATAACAAGGTTAAAGTTTTTTATTTTTTATTTATTTAAAAAAAAAATTTTAATATAAGATCAGCGACAACTAAATTTGAATCAAGACATCGTTATCATCATCAACTTCATCTTCTTTCCGAAAACTCTGAACTCTTATGGGTTTGATTTTGATATCATTTCACCATACATTTGGAAACGAACTCTCTAACCTGATTAATCAACACAGAACTCTCAGAAATTTCAGGAAACAAATAAAAAGCATGAATCATATTCGGAAATTCAATCAAATCCACTTTCTTCCCACAATCCTTCAACCATTCATAATACCTTCTCTGCCAATCCTTCAACGGATCGAATCCCCCTACGAACACAACCGTCGCCGGAAATTCCTCCAGTTCCGAAATCTCCTCCGCATTCGGCCCACTAACGTTCGCCGCTGGATGGTCTCGATCCGATCCTTCCGGCAGGAACGCCTTCCAAAGCCAATCCGTTCTCGCCATCGAAACGATGTATCCTGGATCTAATCGGATCTCCGATTCCGTCCGTTCCTCTCCACCGAAAAACGGTTGAATCGTTACTAATCCGATGATTCTCGCTCTCTGGAACTGCGATCTCCGCCGACAGAATCGAACGGCGACGTGGTGAGCGAGGTTAGCGCCGGCGCTGTCGCCGGCAAGGAAGCATTTAGAGAGATCGGCAGTGGGAGGGAGGAGACCAACGGTGTTGTTCTCGTGGTCGAGGAAACGGAGGACGTCGAAGCCGTCGTCGTATTGAGAGGGGAAACGATGTTCGGGAGAGAGACGGTAGTCGACGGAGAGGACGACGGCGGGGATACGACGAGCGAAGCGGCGGCAGACGGCGACGTAAGAGAAAGAAGCGTTGCTGAGTAAGGCGAAACCGCCGCCGTGGAAGAAAATGAGGACGGGAAGAGAGGCGGCATCGGAGGAAGGGGTGAAAACGCGAACAGAGAGGTTGCGAGAGGAATCGACGATGACGTCGAAGGAGAGGACGCCATGGATGTGCTTGACAGGATTGGTAGGGGATTTGAAATCGAAGAGGCGGAGGAGGCGGCGGTTGACAGTGCCGTTAGGGCGAGTGGCGAGGTCGCCGCAGAAGGAGGAGAGGGAGACAACGATGCGGGTTTTCCAAGGGAGAGAAGGGGATTTGAAAATGGGGGGCGGAGGGGGCGGCGGAGGTGGAGGATTGAGGGAAGGGCGATCCATGGGATTAAGTGAAAGAGTAGAGGAAATGGATGAGAGGAAGGGGAAAGAAGAAAGGATGGTAGATAAGGAAGGTGAGCGCCTGCTCTGCCATGGCCAATCAGCTCTGTCTTGTGTGAAATTTTTTTTTTTTTTTTTTTTTTTCTTCATTTTTTTTCATTTATTGCTTTTCTTTTTACTAACTAACATTTTCAAACTACCATAAAGAACCTCTACTTTCCTTTCAGCAATCATGACCTACATTCTCACCTAA

mRNA sequence

ATGAACATTTCCGAAATCTCCTCCGCATTCGGCCCACTAACGTTCGCCGCTGGATGGTCTCGATCCGATCCTTCCGGCAGGAACGCCTTCCAAAGCCAATCCGTTCTCGCCATCGAAACGATGTATCCTGGATCTAATCGGATCTCCGATTCCGTCCGTTCCTCTCCACCGAAAAACGAATCGAACGGCGACGTGGTGAGCGAGGTTAGCGCCGGCGCTGTCGCCGGCAAGGAAGCATTTAGAGAGATCGGCAGTGGGAGGGAGGAGACCAACGGTGTTGTTCTCGTGGTCGAGGAAACGGAGGACGTCGAAGCCGTCGTCGTATTGAGAGGGGAAACGATGTTCGGGAGAGAGACGGTAGTCGACGGAGAGGACGACGGCGGGGATACGACGAGCGAAGCGGCGGCAGACGGCGACGCGAAACCGCCGCCGTGGAAGAAAATGAGGACGGGAAGAGAGGCGGCATCGGAGGAAGGGGTGAAAACGCGAACAGAGAGGTTGCGAGAGGAATCGACGATGACGTCGAAGGAGAGGACGCCATGGATGTGCTTGACAGGATTGGTAGGGGATTTGAAATCGAAGAGGCGGAGGAGGCGGCGGTTGACAGTGCCGTTAGGGCGAGTGGCGAGGTCGCCGCAGAAGGAGGAGAGGGAGACAACGATGCGGGTTTTCCAAGGGAGAGAAGGGGATTTGAAAATGGGGGGCGGAGGGGGCGGCGGAGGTGGAGGATTGAGGGAAGGGCGATCCATGGGATTAAGTGAAAGAGTAGAGGAAATGGATGAGAGGAAGGGGAAAGAAGAAAGGATGGTAGATAAGGAAGCAATCATGACCTACATTCTCACCTAA

Coding sequence (CDS)

ATGAACATTTCCGAAATCTCCTCCGCATTCGGCCCACTAACGTTCGCCGCTGGATGGTCTCGATCCGATCCTTCCGGCAGGAACGCCTTCCAAAGCCAATCCGTTCTCGCCATCGAAACGATGTATCCTGGATCTAATCGGATCTCCGATTCCGTCCGTTCCTCTCCACCGAAAAACGAATCGAACGGCGACGTGGTGAGCGAGGTTAGCGCCGGCGCTGTCGCCGGCAAGGAAGCATTTAGAGAGATCGGCAGTGGGAGGGAGGAGACCAACGGTGTTGTTCTCGTGGTCGAGGAAACGGAGGACGTCGAAGCCGTCGTCGTATTGAGAGGGGAAACGATGTTCGGGAGAGAGACGGTAGTCGACGGAGAGGACGACGGCGGGGATACGACGAGCGAAGCGGCGGCAGACGGCGACGCGAAACCGCCGCCGTGGAAGAAAATGAGGACGGGAAGAGAGGCGGCATCGGAGGAAGGGGTGAAAACGCGAACAGAGAGGTTGCGAGAGGAATCGACGATGACGTCGAAGGAGAGGACGCCATGGATGTGCTTGACAGGATTGGTAGGGGATTTGAAATCGAAGAGGCGGAGGAGGCGGCGGTTGACAGTGCCGTTAGGGCGAGTGGCGAGGTCGCCGCAGAAGGAGGAGAGGGAGACAACGATGCGGGTTTTCCAAGGGAGAGAAGGGGATTTGAAAATGGGGGGCGGAGGGGGCGGCGGAGGTGGAGGATTGAGGGAAGGGCGATCCATGGGATTAAGTGAAAGAGTAGAGGAAATGGATGAGAGGAAGGGGAAAGAAGAAAGGATGGTAGATAAGGAAGCAATCATGACCTACATTCTCACCTAA

Protein sequence

MNISEISSAFGPLTFAAGWSRSDPSGRNAFQSQSVLAIETMYPGSNRISDSVRSSPPKNESNGDVVSEVSAGAVAGKEAFREIGSGREETNGVVLVVEETEDVEAVVVLRGETMFGRETVVDGEDDGGDTTSEAAADGDAKPPPWKKMRTGREAASEEGVKTRTERLREESTMTSKERTPWMCLTGLVGDLKSKRRRRRRLTVPLGRVARSPQKEERETTMRVFQGREGDLKMGGGGGGGGGGLREGRSMGLSERVEEMDERKGKEERMVDKEAIMTYILT

Homology

[Close]

BLAST of CcUC09G170660 vs. NCBI nr
Match: GAU28475.1 (hypothetical protein TSUD_294780 [Trifolium subterraneum])

HSP 1 Score: 67.8 bits (164), Expect = 1.7e-07
Identity = 47/95 (49.47%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 139 DAKPPPWKKMRTGREA----ASEEGVKTRTERLREESTMTSKERTPWMCLTGLVGDLKSK 198
           +AKPPPWK   TGR++      EEG+KTR +RLR EST+TS+E TP   L GL G   S 
Sbjct: 2   NAKPPPWKNTNTGRDSPVSTEFEEGMKTRNQRLRVESTITSEEDTPSTKL-GLGGIFLSM 61

Query: 199 RRRRRRLTVPLGRVARSPQKEERETTMRVFQGREG 230
           + RR RL VPL R  R  +K   +   R F GR G
Sbjct: 62  KLRRPRLMVPLERRERERKKSRIDMEKRAFHGRIG 95

[Close]

BLAST of CcUC09G170660 vs. NCBI nr
Match: PNX80657.1 (hypothetical protein L195_g036663 [Trifolium pratense])

HSP 1 Score: 64.7 bits (156), Expect = 1.5e-06
Identity = 46/95 (48.42%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 139 DAKPPPWKKMRTGREAAS----EEGVKTRTERLREESTMTSKERTPWMCLTGLVGDLKSK 198
           +AKPPPWK   TGR+A      EEG+KTR +RL   ST+TS+E TP   L  L G   S 
Sbjct: 2   NAKPPPWKNTNTGRDAPMSTEFEEGIKTRNQRLCVGSTITSEEDTPSTKLE-LGGIFLSM 61

Query: 199 RRRRRRLTVPLGRVARSPQKEERETTMRVFQGREG 230
           + RRRRL VPL R  R  +K   +   R F GR G
Sbjct: 62  KLRRRRLMVPLERRERERKKSRTDMEKRAFNGRIG 95

[Close]

BLAST of CcUC09G170660 vs. NCBI nr
Match: KAA8528052.1 (hypothetical protein F0562_035079 [Nyssa sinensis])

HSP 1 Score: 58.5 bits (140), Expect = 1.0e-04
Identity = 47/134 (35.07%), Postives = 58/134 (43.28%), Query Frame = 0


Query: 3   ISEISSAFGPLTFAAGWSRSDPSGRNAFQSQSVLAIETMYPGSNRISDSVRSSPPKNESN 62
           +SEIS+  GP TFAA  SR DP+GRNA   QSV ++ T     +R SDS           
Sbjct: 10  MSEISTELGPNTFAASLSRFDPTGRNALHIQSVRSVFTSGAFVSRSSDS----------- 69

Query: 63  GDVVSEVSAGAVAGKEAFREIGSGREETNGVVLVVEETEDVEAVVVLRGETMFGRETVVD 122
                                                   VEAVVVLRG+ +F  E VVD
Sbjct: 70  ---------------------------------------SVEAVVVLRGDAVFRCEAVVD 93

Query: 123 GEDDGGDTTSEAAA 137
           G+D+GG+   E AA
Sbjct: 130 GDDNGGEFVGETAA 93

[Close]

BLAST of CcUC09G170660 vs. ExPASy TrEMBL
Match: A0A2Z6MXL7 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_294780 PE=4 SV=1)

HSP 1 Score: 67.8 bits (164), Expect = 8.3e-08
Identity = 47/95 (49.47%), Postives = 57/95 (60.00%), Query Frame = 0


Query: 139 DAKPPPWKKMRTGREA----ASEEGVKTRTERLREESTMTSKERTPWMCLTGLVGDLKSK 198
           +AKPPPWK   TGR++      EEG+KTR +RLR EST+TS+E TP   L GL G   S 
Sbjct: 2   NAKPPPWKNTNTGRDSPVSTEFEEGMKTRNQRLRVESTITSEEDTPSTKL-GLGGIFLSM 61

Query: 199 RRRRRRLTVPLGRVARSPQKEERETTMRVFQGREG 230
           + RR RL VPL R  R  +K   +   R F GR G
Sbjct: 62  KLRRPRLMVPLERRERERKKSRIDMEKRAFHGRIG 95

[Close]

BLAST of CcUC09G170660 vs. ExPASy TrEMBL
Match: A0A2K3LQ62 (Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g036663 PE=4 SV=1)

HSP 1 Score: 64.7 bits (156), Expect = 7.1e-07
Identity = 46/95 (48.42%), Postives = 55/95 (57.89%), Query Frame = 0


Query: 139 DAKPPPWKKMRTGREAAS----EEGVKTRTERLREESTMTSKERTPWMCLTGLVGDLKSK 198
           +AKPPPWK   TGR+A      EEG+KTR +RL   ST+TS+E TP   L  L G   S 
Sbjct: 2   NAKPPPWKNTNTGRDAPMSTEFEEGIKTRNQRLCVGSTITSEEDTPSTKLE-LGGIFLSM 61

Query: 199 RRRRRRLTVPLGRVARSPQKEERETTMRVFQGREG 230
           + RRRRL VPL R  R  +K   +   R F GR G
Sbjct: 62  KLRRRRLMVPLERRERERKKSRTDMEKRAFNGRIG 95

[Close]

BLAST of CcUC09G170660 vs. ExPASy TrEMBL
Match: A0A7C8YG11 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 3.0e-05
Identity = 38/76 (50.00%), Postives = 48/76 (63.16%), Query Frame = 0


Query: 52  VRSSPPKNESNGDVVSEVSAGAVAGKEAFREIGSGREETNGVVLVVEETEDVEAVVVLRG 111
           VR   P +  N DVV +V AGAV+G +A  ++   R   +     VEE EDVE+VVVL G
Sbjct: 112 VRELSPASPDN-DVVGDVPAGAVSGDKALGDVSGFRPFGDLPAAAVEEGEDVESVVVLGG 171

Query: 112 ETMFGRETVVDGEDDG 128
           E MFG ETV+DG +DG
Sbjct: 172 ELMFGAETVLDGANDG 186

[Close]

BLAST of CcUC09G170660 vs. ExPASy TrEMBL
Match: A0A5J5ADV2 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_035079 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 5.1e-05
Identity = 47/134 (35.07%), Postives = 58/134 (43.28%), Query Frame = 0


Query: 3   ISEISSAFGPLTFAAGWSRSDPSGRNAFQSQSVLAIETMYPGSNRISDSVRSSPPKNESN 62
           +SEIS+  GP TFAA  SR DP+GRNA   QSV ++ T     +R SDS           
Sbjct: 10  MSEISTELGPNTFAASLSRFDPTGRNALHIQSVRSVFTSGAFVSRSSDS----------- 69

Query: 63  GDVVSEVSAGAVAGKEAFREIGSGREETNGVVLVVEETEDVEAVVVLRGETMFGRETVVD 122
                                                   VEAVVVLRG+ +F  E VVD
Sbjct: 70  ---------------------------------------SVEAVVVLRGDAVFRCEAVVD 93

Query: 123 GEDDGGDTTSEAAA 137
           G+D+GG+   E AA
Sbjct: 130 GDDNGGEFVGETAA 93

[Close]

BLAST of CcUC09G170660 vs. ExPASy TrEMBL
Match: A0A7C8YGF3 (Uncharacterized protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 1.5e-04
Identity = 39/97 (40.21%), Postives = 49/97 (50.52%), Query Frame = 0


Query: 9  AFGPLTFAAGWSRSDPSGRNAFQSQSVLAIETMYPGSNRISDSVRSSPPKNESN------ 68
          A GP T AA WSRS+PSG+NA    SV + +T+   SN ISD   S PPK   N      
Sbjct: 1  ALGPQTLAAQWSRSNPSGKNARHIHSVRSNDTIGAPSNSISDLALSLPPKKGLNVDQPNY 60

Query: 69 ------------GDVVSEVSAGAVAGKEAFREIGSGR 88
                       DVV +V AGAV+G +A  ++   R
Sbjct: 61 LEVRELSPASPDNDVVGDVPAGAVSGDKALGDVSGFR 97

The following BLAST results are available for this feature:

BLAST of CcUC09G170660 vs. NCBI nr


Match Name	E-value	Identity	Description
GAU28475.1	1.7e-07	49.47	hypothetical protein TSUD_294780 [Trifolium subterraneum]	[more]
PNX80657.1	1.5e-06	48.42	hypothetical protein L195_g036663 [Trifolium pratense]	[more]
KAA8528052.1	1.0e-04	35.07	hypothetical protein F0562_035079 [Nyssa sinensis]	[more]

BLAST of CcUC09G170660 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC09G170660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A2Z6MXL7	8.3e-08	49.47	Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_294780 PE=4 SV...	[more]
A0A2K3LQ62	7.1e-07	48.42	Uncharacterized protein OS=Trifolium pratense OX=57577 GN=L195_g036663 PE=4 SV=1	[more]
A0A7C8YG11	3.0e-05	50.00	Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]
A0A5J5ADV2	5.1e-05	35.07	Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_035079 PE=4 SV=1	[more]
A0A7C8YGF3	1.5e-04	40.21	Uncharacterized protein (Fragment) OS=Opuntia streptacantha OX=393608 PE=4 SV=1	[more]

BLAST of CcUC09G170660 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..66
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 119..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 250..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 228..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 45..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..175

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G170660.1	CcUC09G170660.1	mRNA