CcUC09G169630 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G169630
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptionprotein ROOT PRIMORDIUM DEFECTIVE 1
LocationCicolChr09: 5812727 .. 5818144 (+)
RNA-Seq ExpressionCcUC09G169630
SyntenyCcUC09G169630
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTATGCTTTCCTCGCCCAATAAGCTCTTCTCATATCTCCGCAGCTTCAAATCTGCTCAGCCGTCTTTCCTAAGCCGAGAAATCGTCTTCCAGATCAGATCCATTTCGAGTTTGAAGGTAATTTGGCGCAAGGATCACAGATTGGACGAAGCCATCGAGAACGACAAGCGGTACAAGCTATGCGCGCGTGTTGTGAGGGAGGTTCTCAACGAGCCAGGCCAGGTGATTCCAATTCGATATCTGGAAAAACGACGACAGAGATTGCGCCTAAATGTGTCAGTCAACGCGTTTCTGAGTTTCAATCCGGGTTTGTTCGATACTTATTATGATAGAATCAAACCTAAATCTGAACCTGTTTTGTTCTTACGCGCGAGCGATCGACTTAGGGGATTTCTCGAAGAAGAGAAGAGGATTACGATGGAAAACGAAGGGTTGATCGTTTCAAAATTGTGTAAGTTATTGATGATATCGAAGCATAAAATGCTTAGTGTCGATAAATTAGTGCATGTTAAGAGGGAATTTGGGTTTCCGAATGATTTTTTGGTCAATTTGGTGCCGAAGTACCCTGAATATTTTCAGATAGTTGGGAGTCCGGGAGAGGGAAAATCGTTTCTTCAATTGGTTTCTCGAAACCCTGATTTTGCGAAATCAGTGATTGAGAGAAGAGCTGAGGATGAATCGATATCGACAGGCATTCGTATTCGGCCTAATTTCGACTACAAGCTTCCTCCTGGATTCATCTTAAGAAAGGAAATGAGAGAATGGGTTAGAGATTGGTTAGAATTAGATTACATATCGCCATACGAGAACGTGTCCCATTTGGCTCAATCTTCGCCGGAGATGGAGAAGAGAACAGTAGGAGTTTTTCACGAGTTGCTATCACTTTCATTGTTCAAGAGGATTCCAGTGCCGACATTGGGGAAATTTAGTGATGAGTACCGGTTTTCAAATGCATTTTCCAGTGTATTCACAAGGCATTCTGGGATTTTCTATATGTCTTTGAAAGGTGGGATTGAGACTGCAATGCTTCGAGAGGCATATGAGGGGGACAAGTTGATTGATTGTGACCCATTGCTTGTAATAAAAGATAAGTTTGTGGAGTTGTTGGAACAAGGATGGAGGGAGAGAGCTGACCAGCGAACGCAACGGGCAAAACAATTCAGGAAGGACATGGAATTCATGGCTGCAAGGGCTGTTCATTTGAAGGGCTGAGTCTTGCGATGAAGATGACCTTGCCAGGTAAATAGATTTTGGGAAATCTTCATTTTTAATCATATTGATCTCTCAACTTTCAATTTAATCGAGTCGAATCATCAACTTATTCAAGTTGTGAAATCATGGGTTGACCTAGTGGTAAAAAGAAGACATAGTCTCAGTAAATGACTAAAAGGAAAAGGGCTCAATTCATGGTGACCACCTACCTAGAAATTAATTTTCGTAATTTCCTACGAGTTTCCTTGACATCCAAATGTTGTAGGGTCAGGTGGGTTGTCCCGTGAGATTAGTTGAGCTGCACGTAAGTTGGCATGGACACTCATAAATTAAAAATGGTCATTCTAATTATCATTATGTCTGATTGGACAGATTAGCATTGTAGTTCCGTAATTCAATTTAACCTTTATGATTTTGTCCATTGACATTGCTCTGTGGAGGTTCGACAATCTTTATGATTTCGTAGAATATTTAACTATAAAATTTAGTGAAGCCACTGTTTGCCTATGCTTAATGTTACTCGTGATGTAGGAAATTCTACAACTTTTCTTTTTACTTGAGGTTCATGCATGAGTCCCACTTTTTTTTTCTTTGTATTATATTATGTTTATCAAGAATGCCTGTGATTGGTCAAAAAATAAGTGGGATTTACTTAATGGTAAAGGATCAGGAGTAAGGAGCTAAGTTCCTGTTGTGTATATGGGGGCATTCGGCATTGATATTAATATTTTTTATACTCGAAATTTCCCTCTTTCTTTTTCTCTTAACGAGTATAAATCTACAGATGACCATGAGAAAATAATTTTTCTGATAATAAATGTAATAATGATAAAATTAAACAAAATGGGGAATGAGCGCCTCAACTCAAGTCAAGGAAGTTATGAATTATTATTATTGTGACTTTCAAATTAGAATAATTTGAGATTGAGATCAAACAAAAGAGCTCTGATAGTTTGGATGAAAGCATAGCATTAAAAATAGCAGATTCCTAGGAAATCTTTGTTTTCCTAAAAAAAAAACATGCTGTTTCTCTGACCAAAATGTCCCCGAAAATAAAGCTCTGGTGAAGTAAAATTACAAAGTCGTGACTCAAACCCCATAAGCCTGCCTTTCGGAGCCGAGGGGAATTTTGGTGTTCAGAAAAGTAGTATGCCAATTGGAATAGGTTAACAAAAATTGCCAGAATTTAGTGGTTAATCAACAGCTGATAAAAGGAGCTCTTGAATTCTATTGTTTGCTTCTCTTTACACATTGTACACGGGGACTAGTAGCTTTTAGGGTGCTTTGGAGCAGAATAACACAGTGTTTAAAGGGTTAGGGAGGGATCGTAGAGATGTTTTGCCTCTAGTCAAATTCTATGTTTTCTTGTAGACTTTGATTTCGAGATTTTGAAGACCATTTGTAACTATTCTATAGGAATTATCTTTTATGGTTGGAGTCCTTTTCTTTAGCTGTTCCCTTCTTTCATGGGTTTGGTTTTTTCTTTTTCACTCTATTTTAAGAAGCAATCTCGTACAAACTCGTAACAAATTACCTTGTTAATTATCATAGTAGTAGTAGTACTCAAGGTGTGGTTCATGTCATGGTGTTTGAATGGCACCTAACTTCTCCCTAATAATTATCATCTTTTGGGAAGAAATTGTTCTATCTTGATGTGTAGTTCAATCATCATGGATTGGCCTAGTGGTCAATAAGGGTCCTAGGTTTAATAAAGGACTTAGAAGAAATGGATCTAATTCACGGTGGCCATCTACCTAGGATCTAATATCGTACAAGTTTTCTTGGCACCAAAATGTTGTAGAGGACAGGATGTCCTGTGAGATTAATCGAGGTACATGCAATATGGTTCGGACACTCACGGTTATAAAAAAAATAAAAATCGTGAATAATCTTGACATGTAGTTCATGGGAAGAATTGATGATCTGTTCATACATGAGAGCACTTCCTTTTGGAAACATTTCTAAACAATCAGCAAATGAATTGTCCACCAATGAGAGGTGTAAAAAATTGAAAATTTTCTAGGTTTCTTCATCATCGCTCCGAGATGAAATGCACACATCTCCATTTAATTAGTGCAACTTTTGGAATAACATCCAGTCTTGAGGAAATCACCCAATCTAGCAACTCTGCCTAGTGCTAAATGGTTTGTTAGGTATCTAACTATTCCTGCACACGGAAAAACCATGAACAAGGGACAATACTCCCTGGATATTCACTAAAATAAACCCAAACACAACGAGTACACAATTACAAGGTAAAAGTCTAAGAACTATATGAAGAACAAGTAAAAAGGAAACAATAACCCTCGGCTATTTGGGAGAGCCGAATTGTCTCCTCTAGTGTTGCTACTCACACCAAAAAAATCCCCACCGTCCTTCTCAGCAAAAAGCTTCTTAGGCCTCTCTTGATCCCCACCAACAGTACGCTCCTCAACTTGCTGCTCCATTAACGGTCTCATGTGAATCTACCTTCAAACTCTTTCTTGAATATTGGTACCTAATTGTTGGTCTCACATGGTTTAGCAGCGAAATGTTCAAATTAGCCTTCAAGCAAGTAGGCAGAGGCTGGCCTAGTATACCGGCTTGAACGTTGAAATTCGTTAACCTTATTTCACTCGCGTGAAACCCCCATTAGTCACCTTATACCCAACATTAGAAATGTATTGTCATTCAAACTACCTTTAGAAATGCTTTTGGGGTTTACTCAAATTTGCTTCAATGGTTCCCAAGTTCATTAAGCTGAACTGCCTATGGAAAACAGGTTGACTCTTGCAGCACCCTAAACCATTGATCATGGAGGGTGGTATAGACCATTGCATCTATATTTGCGCCCATATACACAGTATTATTGATTAGGAAATGGTCTCATGATGCCTATTATATATGATAGGCACTATTTTGCATAATTGGAATCCCTTTTTGTAAGCCTATTACATGTGATATAATTGACAATATGTGAAGGACATGATCGATCTGGTAGGGTTTAGTCTACTGAATAATCTAGTATCCATGGAATGATTTTTTCCACATCTTGTGCATGTTGTATATGCTTCTTAATGAGGTGAACACTTCAAGTGAACTTTTCATCATTGTATTCAAAATAATCTAGTATTGTTCATGTTACAAGTGATGCAGGGGGAAAAAGGTTGAAGTTTCCACAGGATGGAAAATCTTCTCATCCTTGTTATAAGAAGAAAATTTCTTAAATCAGATCTCCAACCCCGCAAAATAGAGACCTGTTTTTATATGTGAAATTCATTCACCCTTTTTTTTGGATAAGAGAATTCATTCACCCTTTGAAGCATTAAAATAAGTACTTTCTTTTCTCCGAGAGTTCATCTTGCTTATTTTGTATATTTCAGGGACGAACTCAACAAGAAAGTGATGAAGTTTATTCACAATGAGGTTTAATTCAACTCTCGTGTGCCACCTAACAAACTGGTCTCAAAATGAATGAGCCCATAACAAAATACCAACCAAACAGAACCTAAAACCTCATTCTTCGATAACTTACTTCACTCTCACAGAAAAAGAAGGAAAAATAAAAAAAACGTTGCAAACAAATACTGACCCAAGGATCTTATGAATTCTGGATTCTATAAATACCGTCAATCTGCAACAGCCAGAAAGCCTTCCTGGATTCCTGTGTTCTTGCTTTGACAAGGAAAAGCTAGATAGCCTGCTCGAATGGGGAGATTCAATAGCCTTATACTTGCGGTAACATTGTTCTTTGCTCTGATTACTGAAACAGAGGGTCAATGGCAGCCACCGGACGTTGCACCTCGACCACTCTGCGCCTCCCAGATTGCATTAGCAAACTATGCGTGCGCAATGCTGCCTTACTCCACAGTCCTGCCACCACCGACTCCATCATTATCACTCTCTGATAACCATGAAAGCCAAAGCACTCCTAGTCCTAGCCACACACACCGGCACGAACACCAGCACAGACACTGGCACGAACACCAGCACAGACACCGACACGAACAGGAGCACGGACACCAGCACAAGATCCCACTATCACCATTGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGATAGTGAATGTATATGTGGGCTGTTGTCCCGGTTGCCTGCATTCCTAGAGAGGCCTCAGCATAACTTTTCCGTTACCGTTGGCAGTTCGTGTGATGCTACATACTCGTGCAGAGGAGGAATCAAAAGCTAAAGCAAAATTCTTC

mRNA sequence

GTATGCTTTCCTCGCCCAATAAGCTCTTCTCATATCTCCGCAGCTTCAAATCTGCTCAGCCGTCTTTCCTAAGCCGAGAAATCGTCTTCCAGATCAGATCCATTTCGAGTTTGAAGGTAATTTGGCGCAAGGATCACAGATTGGACGAAGCCATCGAGAACGACAAGCGGTACAAGCTATGCGCGCGTGTTGTGAGGGAGGTTCTCAACGAGCCAGGCCAGGTGATTCCAATTCGATATCTGGAAAAACGACGACAGAGATTGCGCCTAAATGTGTCAGTCAACGCGTTTCTGAGTTTCAATCCGGGTTTGTTCGATACTTATTATGATAGAATCAAACCTAAATCTGAACCTGTTTTGTTCTTACGCGCGAGCGATCGACTTAGGGGATTTCTCGAAGAAGAGAAGAGGATTACGATGGAAAACGAAGGGTTGATCGTTTCAAAATTGTGTAAGTTATTGATGATATCGAAGCATAAAATGCTTAGTGTCGATAAATTAGTGCATGTTAAGAGGGAATTTGGGTTTCCGAATGATTTTTTGGTCAATTTGGTGCCGAAGTACCCTGAATATTTTCAGATAGTTGGGAGTCCGGGAGAGGGAAAATCGTTTCTTCAATTGGTTTCTCGAAACCCTGATTTTGCGAAATCAGTGATTGAGAGAAGAGCTGAGGATGAATCGATATCGACAGGCATTCGTATTCGGCCTAATTTCGACTACAAGCTTCCTCCTGGATTCATCTTAAGAAAGGAAATGAGAGAATGGGTTAGAGATTGGTTAGAATTAGATTACATATCGCCATACGAGAACGTGTCCCATTTGGCTCAATCTTCGCCGGAGATGGAGAAGAGAACAGTAGGAGTTTTTCACGAGTTGCTATCACTTTCATTGTTCAAGAGGATTCCAGTGCCGACATTGGGGAAATTTAGTGATGAGTACCGGTTTTCAAATGCATTTTCCAGTGTATTCACAAGGCATTCTGGGATTTTCTATATGTCTTTGAAAGGTGGGATTGAGACTGCAATGCTTCGAGAGGCATATGAGGGGGACAAGTTGATTGATTGTGACCCATTGCTTGTAATAAAAGATAAGTTTGTGGAGTTGTTGGAACAAGGATGGAGGGAGAGAGCTGACCAGCGAACGCAACGGGCAAAACAATTCAGGAAGGACATGGAATTCATGGCTGCAAGGGCTGGACGAACTCAACAAGAAAGTGATGAACCTGCTCGAATGGGGAGATTCAATAGCCTTATACTTGCGGTAACATTGTTCTTTGCTCTGATTACTGAAACAGAGGGTCAATGGCAGCCACCGGACGTTGCACCTCGACCACTCTGCGCCTCCCAGATTGCATTAGCAAACTATGCGTGCGCAATGCTGCCTTACTCCACAGTCCTGCCACCACCGACTCCATCATTATCACTCTCTGATAACCATGAAAGCCAAAGCACTCCTAGTCCTAGCCACACACACCGGCACGAACACCAGCACAGACACTGGCACGAACACCAGCACAGACACCGACACGAACAGGAGCACGGACACCAGCACAAGATCCCACTATCACCATTGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGATATTCGTGTGATGCTACATACTCGTGCAGAGGAGGAATCAAAAGCTAAAGCAAAATTCTTC

Coding sequence (CDS)

ATGCTTTCCTCGCCCAATAAGCTCTTCTCATATCTCCGCAGCTTCAAATCTGCTCAGCCGTCTTTCCTAAGCCGAGAAATCGTCTTCCAGATCAGATCCATTTCGAGTTTGAAGGTAATTTGGCGCAAGGATCACAGATTGGACGAAGCCATCGAGAACGACAAGCGGTACAAGCTATGCGCGCGTGTTGTGAGGGAGGTTCTCAACGAGCCAGGCCAGGTGATTCCAATTCGATATCTGGAAAAACGACGACAGAGATTGCGCCTAAATGTGTCAGTCAACGCGTTTCTGAGTTTCAATCCGGGTTTGTTCGATACTTATTATGATAGAATCAAACCTAAATCTGAACCTGTTTTGTTCTTACGCGCGAGCGATCGACTTAGGGGATTTCTCGAAGAAGAGAAGAGGATTACGATGGAAAACGAAGGGTTGATCGTTTCAAAATTGTGTAAGTTATTGATGATATCGAAGCATAAAATGCTTAGTGTCGATAAATTAGTGCATGTTAAGAGGGAATTTGGGTTTCCGAATGATTTTTTGGTCAATTTGGTGCCGAAGTACCCTGAATATTTTCAGATAGTTGGGAGTCCGGGAGAGGGAAAATCGTTTCTTCAATTGGTTTCTCGAAACCCTGATTTTGCGAAATCAGTGATTGAGAGAAGAGCTGAGGATGAATCGATATCGACAGGCATTCGTATTCGGCCTAATTTCGACTACAAGCTTCCTCCTGGATTCATCTTAAGAAAGGAAATGAGAGAATGGGTTAGAGATTGGTTAGAATTAGATTACATATCGCCATACGAGAACGTGTCCCATTTGGCTCAATCTTCGCCGGAGATGGAGAAGAGAACAGTAGGAGTTTTTCACGAGTTGCTATCACTTTCATTGTTCAAGAGGATTCCAGTGCCGACATTGGGGAAATTTAGTGATGAGTACCGGTTTTCAAATGCATTTTCCAGTGTATTCACAAGGCATTCTGGGATTTTCTATATGTCTTTGAAAGGTGGGATTGAGACTGCAATGCTTCGAGAGGCATATGAGGGGGACAAGTTGATTGATTGTGACCCATTGCTTGTAATAAAAGATAAGTTTGTGGAGTTGTTGGAACAAGGATGGAGGGAGAGAGCTGACCAGCGAACGCAACGGGCAAAACAATTCAGGAAGGACATGGAATTCATGGCTGCAAGGGCTGGACGAACTCAACAAGAAAGTGATGAACCTGCTCGAATGGGGAGATTCAATAGCCTTATACTTGCGGTAACATTGTTCTTTGCTCTGATTACTGAAACAGAGGGTCAATGGCAGCCACCGGACGTTGCACCTCGACCACTCTGCGCCTCCCAGATTGCATTAGCAAACTATGCGTGCGCAATGCTGCCTTACTCCACAGTCCTGCCACCACCGACTCCATCATTATCACTCTCTGATAACCATGAAAGCCAAAGCACTCCTAGTCCTAGCCACACACACCGGCACGAACACCAGCACAGACACTGGCACGAACACCAGCACAGACACCGACACGAACAGGAGCACGGACACCAGCACAAGATCCCACTATCACCATTGGAGGAGAATTGTTGTAAGTGGGTGCAGCAGTTGGATATTCGTGTGATGCTACATACTCGTGCAGAGGAGGAATCAAAAGCTAAAGCAAAATTCTTC

Protein sequence

MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVIKDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARAGRTQQESDEPARMGRFNSLILAVTLFFALITETEGQWQPPDVAPRPLCASQIALANYACAMLPYSTVLPPPTPSLSLSDNHESQSTPSPSHTHRHEHQHRHWHEHQHRHRHEQEHGHQHKIPLSPLEENCCKWVQQLDIRVMLHTRAEEESKAKAKFF
Homology
BLAST of CcUC09G169630 vs. NCBI nr
Match: XP_038899043.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida])

HSP 1 Score: 731.5 bits (1887), Expect = 5.5e-207
Identity = 368/396 (92.93%), Postives = 381/396 (96.21%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           MLS+P+ LFS LRSFKSA PS LS+EIVFQIR ISSLKVIWRKD+RLDEAIENDKRYKLC
Sbjct: 1   MLSTPHTLFSCLRSFKSAHPSLLSQEIVFQIRHISSLKVIWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIP+RYLEKRRQRLRLNVSV  F+S NPGLF+TYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSVKMFMSCNPGLFETYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISK KMLSVDKLVHVKREFGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKDKMLSVDKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNF+YK
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFNYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFILRKEMREWVRDWLELDYISPYE+VSHLAQSSPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVPTLGKFSDEYRFSNAFSSVFTRHSGIFY+SLKGGIE AMLREAYEG +LID DPLL I
Sbjct: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIENAMLREAYEGSQLIDRDPLLEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAAR 397
           KDKFVELLEQGWRERA+QR QRAKQ RKDM+FMAAR
Sbjct: 361 KDKFVELLEQGWRERAEQRRQRAKQLRKDMDFMAAR 396

BLAST of CcUC09G169630 vs. NCBI nr
Match: XP_004136063.1 (protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >XP_031744963.1 protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >KGN44870.1 hypothetical protein Csa_016533 [Cucumis sativus])

HSP 1 Score: 710.3 bits (1832), Expect = 1.3e-200
Identity = 353/397 (88.92%), Postives = 371/397 (93.45%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           M S+PN L SYLR  KS  P FLS+EI+ Q R ISSLKV+WRKD+RLDEAIENDKRYKLC
Sbjct: 1   MFSTPNSLISYLRGIKSHCPCFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVV+EVLNEPGQVIP+RYLEKRR+RLRLNVSV AFL FNPGLFDTYYDRIKPKSEPVLF
Sbjct: 61  ARVVKEVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLFDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LRASDRLRGFLEEEKRI MENE LIVSKLCKLLM+SK KMLSVDKLVHVKR+FGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLVHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQIVG PGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIR+RPNFDYK
Sbjct: 181 VNLVPKYPEYFQIVGCPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRMRPNFDYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFILRKEMREWVRDWLELDYISPYE+VSHLAQSSPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVP LGKF  EYRFSNAFSSVFTRHSGIFY+SLKGGIETAMLREAYEG +LIDCDPLL I
Sbjct: 301 PVPILGKFGGEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYEGGQLIDCDPLLEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARA 398
           K+KFVELLEQGWRERA+QR Q+A + RKDMEFM ARA
Sbjct: 361 KNKFVELLEQGWRERAEQRRQQANELRKDMEFMCARA 397

BLAST of CcUC09G169630 vs. NCBI nr
Match: KAG7014426.1 (Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 706.8 bits (1823), Expect = 1.4e-199
Identity = 352/397 (88.66%), Postives = 371/397 (93.45%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           MLS P  LFSYLRSFKSAQ  F+ R+ V QIR++SSLKVIWRKD RLDEAIENDKRYKLC
Sbjct: 1   MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIP+RYLEKRRQRLRLNVS+  F+SFNPGL DTYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LR SDRLRGFLEEEKRITMENE LIVSKLCKLLMISK K+LSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNPDFAKSVIERRAEDESISTGI IRPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYE+VSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVP LGKFSDEYRFSNAFSSVFTRHSGIFY+SLKGGIETAMLREAY+G +LIDCDPLL I
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARA 398
           KDKFVELLE+GWRERA+QR Q+AKQ R DMEFMAARA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARA 397

BLAST of CcUC09G169630 vs. NCBI nr
Match: XP_022953521.1 (protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953524.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953525.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953526.1 protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata])

HSP 1 Score: 706.4 bits (1822), Expect = 1.9e-199
Identity = 352/397 (88.66%), Postives = 372/397 (93.70%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           MLS+P  LFSYLRSFKSAQ  F+ R+ V QIRS+SSLKVIWRKD RLDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIP+RYLEKRRQRLRLNVS+  F+SFNPGL +TYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LR SDRLRGFLEEEKRITMENE LIVSKLCKLLMISK K+LSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNPDFAKSVIERRAEDESISTGI IRPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYE+VSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVP LGKFSDEYRFSNAFSSVFTRHSGIFY+SLKGGIETAMLREAY+G +LIDCDPLL I
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARA 398
           KDKFVELLE+GWRERA+QR Q+AKQ R DMEFMAARA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARA 397

BLAST of CcUC09G169630 vs. NCBI nr
Match: KAG6575893.1 (Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 705.3 bits (1819), Expect = 4.2e-199
Identity = 351/397 (88.41%), Postives = 370/397 (93.20%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           MLS P  LFSYLRSFKSAQ  F+ R+ V QIR++SSLKVIWRKD RLDEAIENDKRYKLC
Sbjct: 1   MLSKPYALFSYLRSFKSAQSCFVRRKFVLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIP+RYLEKRRQRLRLNVS+  F+SFNPGL DTYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LR SDRLRGFLEEEKRITMENE LIVSKLCKLLMISK K+LSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNPDFAKSVIERRAEDESISTGI IRPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYE+VSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVP LGKFSDEYRFSNAFSSVFTRHSGIFY+SLKGGIETAMLREAY+G +LIDCDPL  I
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLFEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARA 398
           KDKFVELLE+GWRERA+QR Q+AKQ R DMEFMAARA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARA 397

BLAST of CcUC09G169630 vs. ExPASy Swiss-Prot
Match: A0MFS5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01037 PE=3 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 9.5e-45
Identity = 117/336 (34.82%), Postives = 184/336 (54.76%), Query Frame = 0

Query: 42  RKDHRLDEAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVN--AFLSF 101
           RK+   D  ++ DK+ KL   + + ++++P +++ +R L K R+ L L       A L  
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query: 102 NPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHK 161
            PG+F+     ++  +  + F   S+  R +L +E RI  E E ++V KL KL+M+S  K
Sbjct: 139 YPGVFEI----VEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSIDK 198

Query: 162 MLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIE 221
            + ++K+ H+K + G P +F   +  +YP+YF++V +P  G + L+L   +P+ A S  E
Sbjct: 199 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 258

Query: 222 ------RRAEDESISTGIRIRPNFD-YKLPPGFILRKEMREWVRDWLELDYISPYENVSH 281
                 R  E E  +  I   P F+  KLP G  L K     +  + ++ YISPY++ SH
Sbjct: 259 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 318

Query: 282 LAQSSPEMEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMS 341
           L   + E EK   GV HELLSL+  KR  V  L  F +E+RFS     +  RH  +FY+S
Sbjct: 319 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 378

Query: 342 LKGGIETAMLREAYEGDKLIDCDPLLVIKDKFVELL 369
           LKG  ++  LREAY   +LID DPL ++K+K   L+
Sbjct: 379 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407

BLAST of CcUC09G169630 vs. ExPASy Swiss-Prot
Match: Q65XL5 (Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0571100 PE=2 SV=1)

HSP 1 Score: 177.9 bits (450), Expect = 3.1e-43
Identity = 116/337 (34.42%), Postives = 181/337 (53.71%), Query Frame = 0

Query: 42  RKDHRLDEAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRLRLNVS--VNAFLSF 101
           RK+   D  I+ DK+ KL  ++   +++ P +V+ +R L + R+ L L     + A L  
Sbjct: 64  RKEIPFDNVIQRDKKLKLVLKLRNILVSNPDRVMSLRDLGRFRRDLGLTRKRRLIALLKR 123

Query: 102 NPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHK 161
            PG+F+   + +       L  R +        +E  +  E+EGL V+KL KLLM+S+ K
Sbjct: 124 FPGVFEVVEEGVYS-----LRFRLTPAAERLYLDELHLKNESEGLAVTKLRKLLMMSQDK 183

Query: 162 MLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVG-SPGEGKSFLQLVSRNPDFAKSVI 221
            + ++K+ H+K + G P +F   +  +YP+YF++V    G G   L+L   +P+ A S  
Sbjct: 184 RILIEKIAHLKNDLGLPPEFRDTICLRYPQYFRVVQMDRGPG---LELTHWDPELAVSAA 243

Query: 222 -----ERRAEDESISTGIRIRP-NFD-YKLPPGFILRKEMREWVRDWLELDYISPYENVS 281
                E RA +E     I  RP  F+  KLP G  L +     V  + E+ YISPY + S
Sbjct: 244 EVAEEENRAREEQERNLIIDRPLKFNRVKLPQGLKLSRGEARRVAQFKEMPYISPYSDFS 303

Query: 282 HLAQSSPEMEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSSVFTRHSGIFYM 341
           HL   S E EK   GV HE+LSL+L KR  V  L  F +E+RFS +   +  RH  +FY+
Sbjct: 304 HLRSGSAEKEKHACGVVHEILSLTLEKRTLVDHLTHFREEFRFSQSLRGMLIRHPDMFYV 363

Query: 342 SLKGGIETAMLREAYEGDKLIDCDPLLVIKDKFVELL 369
           SLKG  ++  LREAY+  +L++   L+++K+K   L+
Sbjct: 364 SLKGDRDSVFLREAYKNSQLVEKSKLVLLKEKMRALV 392

BLAST of CcUC09G169630 vs. ExPASy Swiss-Prot
Match: B6TTV8 (Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=1)

HSP 1 Score: 173.7 bits (439), Expect = 5.8e-42
Identity = 109/337 (32.34%), Postives = 181/337 (53.71%), Query Frame = 0

Query: 42  RKDHRLDEAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRLRLNVS--VNAFLSF 101
           RK+   D  I+ DK+ KL  ++   ++ +P +V+ +R L + R+ L L     + A L  
Sbjct: 58  RKEAPFDTVIQRDKKLKLVLKLRNILVAQPDRVMSLRELGRFRRDLGLTRKRRLIALLRR 117

Query: 102 NPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHK 161
            PG+FD   + +       L  R +        +E R+  E+EGL V+KL KLLM+S+ K
Sbjct: 118 FPGVFDVVEEGVYS-----LRFRLTPAAERLYLDELRLRNESEGLAVAKLRKLLMMSQEK 177

Query: 162 MLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIE 221
            + ++K+ H+K + G P +F   +  +YP+YF++V    +    L+L   +P+ A S  E
Sbjct: 178 RILIEKVAHLKHDLGLPPEFRDTVCLRYPQYFRVVRM--DRGPALELTHWDPELAVSAAE 237

Query: 222 --------RRAEDESISTGIRIRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYENVS 281
                   R AE+ ++     ++ N   +LP G  L +     +  + E+ YISPY + S
Sbjct: 238 LAEEESRAREAEERNLIIDRPLKFN-RVRLPKGLKLTRGEARRIARFKEMPYISPYADFS 297

Query: 282 HLAQSSPEMEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSSVFTRHSGIFYM 341
           HL   S E EK   GV HE+LSL++ KR  V  L  F +E+RFS +   +  RH  +FY+
Sbjct: 298 HLRSGSDEKEKHACGVVHEILSLTVEKRTLVDHLTHFREEFRFSQSLRGMIIRHPDMFYV 357

Query: 342 SLKGGIETAMLREAYEGDKLIDCDPLLVIKDKFVELL 369
           S KG  ++  LREAY+  +L++ + L+++K+K   L+
Sbjct: 358 SFKGDRDSVFLREAYKDSQLVEKNQLVLLKEKMRALV 386

BLAST of CcUC09G169630 vs. ExPASy Swiss-Prot
Match: Q689D6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1 SV=1)

HSP 1 Score: 148.3 bits (373), Expect = 2.6e-34
Identity = 93/339 (27.43%), Postives = 170/339 (50.15%), Query Frame = 0

Query: 43  KDHRLDEAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVN---AFLSF 102
           +DH  D  +E +K+ +   +    +L++P   I I  L+   +RL L    +   AFL  
Sbjct: 48  RDHGYDNYMEVEKKIRKVVKFHSLILSQPNHTIAISLLDTLARRLGLGFKQHEPGAFLLK 107

Query: 103 NPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHK 162
            P +F+ Y   +    + +L+ R + +    +  E    ++     V++L KL+M+S   
Sbjct: 108 FPHVFEIYEHPV----QRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRLRKLVMMSNTG 167

Query: 163 MLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIE 222
            + ++ +   + EFG P DF  +++ K+P++F+++        ++++V ++P+ +   IE
Sbjct: 168 RIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRDKYIEIVEKDPNLSICAIE 227

Query: 223 RRAEDESISTGI---RIRPNFDYKLPPGFILRKEMREWVRDWLELDYISPYENVSHLAQS 282
           R  E E  + GI    +R +F    PPGF + K  R  V  W  L Y SPYE++S     
Sbjct: 228 RVREIEYRTKGIDAEDVRFSFVVNFPPGFKIGKYFRIAVWKWQRLPYWSPYEDISGYDLR 287

Query: 283 SPE----MEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMS 342
           S E    +EKR+V   HELLSL++ K+I +  +  F +             +H GIFY+S
Sbjct: 288 SMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKKLKEFLLQHQGIFYIS 347

Query: 343 LKGG---IETAMLREAYEGDKLIDCDPLLVIKDKFVELL 369
            +G    + T  LRE Y+  +L++ + + + + +  EL+
Sbjct: 348 TRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELV 382

BLAST of CcUC09G169630 vs. ExPASy Swiss-Prot
Match: Q9ZUZ6 (Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=WTF9 PE=4 SV=1)

HSP 1 Score: 111.3 bits (277), Expect = 3.5e-23
Identity = 83/342 (24.27%), Postives = 155/342 (45.32%), Query Frame = 0

Query: 30  QIRSISSLKVIWRKDHRLD--EAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRL 89
           Q R+   + + W++D   D  E I    + K    +   ++ EP + IPI  + K+ ++ 
Sbjct: 20  QKRTYVDVYMKWKRDPYFDNIEHILRSSQLKSVVSLKNCIVQEPNRCIPISAISKKTRQF 79

Query: 90  RLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITMENEGLIVS 149
            ++  +  FL   P +F+ +   + P+   + + R +        +E+ +   +   +  
Sbjct: 80  DVSTKIAHFLRKFPSIFEEF---VGPEYN-LPWFRLTPEATELDRQERVVYQTSADDLRD 139

Query: 150 KLCKLLMISKHKMLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLV 209
           +L KL+++SK  +L +  +  +K   G P+D+L          F+ V    +G   L + 
Sbjct: 140 RLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPDMNLDSSFRFVDME-DGVKGLAVD 199

Query: 210 SRNPDFAKSVIERRAEDESISTGIRIRPNFDYKLPPGFILRKEMREWVRDWLELDYISPY 269
               D   SV+++ A  +           F      G  LR ++ +W+ ++ +L Y+SPY
Sbjct: 200 YNGGDKVLSVLQKNAMKKRRGEVSLEEIEFPLFPSKGCRLRVKIEDWLMEFQKLPYVSPY 259

Query: 270 ENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSSVFTRHSG 329
           ++ S L  SS   EKR VG  HELL L +        L      +         F RH  
Sbjct: 260 DDYSCLDPSSDIAEKRVVGFLHELLCLFVEHSAERKKLLCLKKHFGLPQKVHKAFERHPQ 319

Query: 330 IFYMSLKGGIETAMLREAYEGDKLIDCDPLLVIKDKFVELLE 370
           IFY+S+K    TA+LRE Y     ++  P+L ++ K+++L++
Sbjct: 320 IFYLSMKNKTCTAILREPYRDKASVETHPVLGVRKKYIQLMK 356

BLAST of CcUC09G169630 vs. ExPASy TrEMBL
Match: A0A0A0K559 (PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G392430 PE=4 SV=1)

HSP 1 Score: 710.3 bits (1832), Expect = 6.3e-201
Identity = 353/397 (88.92%), Postives = 371/397 (93.45%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           M S+PN L SYLR  KS  P FLS+EI+ Q R ISSLKV+WRKD+RLDEAIENDKRYKLC
Sbjct: 1   MFSTPNSLISYLRGIKSHCPCFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVV+EVLNEPGQVIP+RYLEKRR+RLRLNVSV AFL FNPGLFDTYYDRIKPKSEPVLF
Sbjct: 61  ARVVKEVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLFDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LRASDRLRGFLEEEKRI MENE LIVSKLCKLLM+SK KMLSVDKLVHVKR+FGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLVHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQIVG PGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIR+RPNFDYK
Sbjct: 181 VNLVPKYPEYFQIVGCPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRMRPNFDYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFILRKEMREWVRDWLELDYISPYE+VSHLAQSSPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVP LGKF  EYRFSNAFSSVFTRHSGIFY+SLKGGIETAMLREAYEG +LIDCDPLL I
Sbjct: 301 PVPILGKFGGEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYEGGQLIDCDPLLEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARA 398
           K+KFVELLEQGWRERA+QR Q+A + RKDMEFM ARA
Sbjct: 361 KNKFVELLEQGWRERAEQRRQQANELRKDMEFMCARA 397

BLAST of CcUC09G169630 vs. ExPASy TrEMBL
Match: A0A6J1GN70 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111456044 PE=4 SV=1)

HSP 1 Score: 706.4 bits (1822), Expect = 9.1e-200
Identity = 352/397 (88.66%), Postives = 372/397 (93.70%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           MLS+P  LFSYLRSFKSAQ  F+ R+ V QIRS+SSLKVIWRKD RLDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSCFVRRKFVLQIRSVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIP+RYLEKRRQRLRLNVS+  F+SFNPGL +TYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LR SDRLRGFLEEEKRITMENE LIVSKLCKLLMISK K+LSVDKLV VKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALIVSKLCKLLMISKDKVLSVDKLVQVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNPDFAKSVIERRAEDESISTGI IRPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPDFAKSVIERRAEDESISTGIDIRPNFNYN 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYE+VSHLAQ+SPEMEKRTVGVFHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGVFHELLSLSLFKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVP LGKFSDEYRFSNAFSSVFTRHSGIFY+SLKGGIETAMLREAY+G +LIDCDPLL I
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARA 398
           KDKFVELLE+GWRERA+QR Q+AKQ R DMEFMAARA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARA 397

BLAST of CcUC09G169630 vs. ExPASy TrEMBL
Match: A0A6J1JZH3 (protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826 PE=4 SV=1)

HSP 1 Score: 703.4 bits (1814), Expect = 7.7e-199
Identity = 348/397 (87.66%), Postives = 373/397 (93.95%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           MLS+P  LFSYLRSFKSAQ SF+ R+   QIR++SSLKVIWRKD RLDEAIENDKRYKLC
Sbjct: 1   MLSTPYALFSYLRSFKSAQSSFVRRKFFLQIRAVSSLKVIWRKDSRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIP+RYLEKRRQRLRLNVS+  F+SFNPGL +TY DRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRQRLRLNVSIKTFMSFNPGLLNTYCDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LR SDRLRGFLEEEKRITMENE L+VSKLCKLLMISK K+LSVDKLVHVKREFGFPNDFL
Sbjct: 121 LRPSDRLRGFLEEEKRITMENEALLVSKLCKLLMISKDKLLSVDKLVHVKREFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQI+GSPG+ KSFLQLVSRNP+FAKSVIERRAEDESISTGI+IRPNF+Y 
Sbjct: 181 VNLVPKYPEYFQIIGSPGDEKSFLQLVSRNPNFAKSVIERRAEDESISTGIQIRPNFNYN 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGF LRKEMREWVRDWLELDYISPYE+VSHLAQ+SPEMEKRTVG+FHELLSLSLFKRI
Sbjct: 241 LPPGFFLRKEMREWVRDWLELDYISPYEDVSHLAQASPEMEKRTVGIFHELLSLSLFKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVP LGKFSDEYRFSNAFSSVFTRHSGIFY+SLKGGIETAMLREAY+G +LIDCDPLL I
Sbjct: 301 PVPILGKFSDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYKGSQLIDCDPLLEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARA 398
           KDKFVELLE+GWRERA+QR Q+AKQ R DMEFMAARA
Sbjct: 361 KDKFVELLEEGWRERAEQRRQQAKQVRNDMEFMAARA 397

BLAST of CcUC09G169630 vs. ExPASy TrEMBL
Match: A0A1S3BS57 (protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4 SV=1)

HSP 1 Score: 702.6 bits (1812), Expect = 1.3e-198
Identity = 348/397 (87.66%), Postives = 371/397 (93.45%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           M S+P+ L SYLR  KS  PSFLS+EI+ Q R ISSLKV+WRKD+RLDEAIENDKRYKLC
Sbjct: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIP+RYLEKRR+RLRLNVSV AFL FNPGL DTYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LRASDRLRGFLEEEKRI MENE LIVSKLCKLLM+SK KMLSVDKL+HVKR+FGFPNDFL
Sbjct: 121 LRASDRLRGFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQIVGSPGEGKSFLQLV+RNPDFAKSVIERRAEDES STGIR+RPNFDYK
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFILRKEMREWVRDWLELDYISPYE+VS+L QSSPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYISPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVP LGKF DEYRFSNAFSSVFTRHSGIFY+SLKGGIETAMLREAY+GD+LIDCDPLL I
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARA 398
           K+KFVELLEQGWRERA+QR ++A + RKDMEFM ARA
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARA 397

BLAST of CcUC09G169630 vs. ExPASy TrEMBL
Match: A0A5D3DBW6 (Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold328G00130 PE=4 SV=1)

HSP 1 Score: 698.7 bits (1802), Expect = 1.9e-197
Identity = 346/397 (87.15%), Postives = 370/397 (93.20%), Query Frame = 0

Query: 1   MLSSPNKLFSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLC 60
           M S+P+ L SYLR  KS  PSFLS+EI+ Q R ISSLKV+WRKD+RLDEAIENDKRYKLC
Sbjct: 1   MFSTPHSLISYLRRIKSPHPSFLSQEIIVQFRPISSLKVVWRKDYRLDEAIENDKRYKLC 60

Query: 61  ARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLF 120
           ARVVREVLNEPGQVIP+RYLEKRR+RLRLNVSV AFL FNPGL DTYYDRIKPKSEPVLF
Sbjct: 61  ARVVREVLNEPGQVIPLRYLEKRRERLRLNVSVKAFLGFNPGLLDTYYDRIKPKSEPVLF 120

Query: 121 LRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFL 180
           LRASDRLR FLEEEKRI MENE LIVSKLCKLLM+SK KMLSVDKL+HVKR+FGFPNDFL
Sbjct: 121 LRASDRLRRFLEEEKRIMMENEELIVSKLCKLLMMSKDKMLSVDKLLHVKRDFGFPNDFL 180

Query: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYK 240
           VNLVPKYPEYFQIVGSPGEGKSFLQLV+RNPDFAKSVIERRAEDES STGIR+RPNFDYK
Sbjct: 181 VNLVPKYPEYFQIVGSPGEGKSFLQLVTRNPDFAKSVIERRAEDESRSTGIRMRPNFDYK 240

Query: 241 LPPGFILRKEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRI 300
           LPPGFILRKEMREWVRDWLELDY+SPYE+VS+L QSSPEMEKRTVGVFHELLSLSL KRI
Sbjct: 241 LPPGFILRKEMREWVRDWLELDYLSPYEDVSYLEQSSPEMEKRTVGVFHELLSLSLLKRI 300

Query: 301 PVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVI 360
           PVP LGKF DEYRFSNAFSSVFTRHSGIFY+SLKGGIETAMLREAY+GD+LIDCDPLL I
Sbjct: 301 PVPILGKFGDEYRFSNAFSSVFTRHSGIFYLSLKGGIETAMLREAYQGDQLIDCDPLLEI 360

Query: 361 KDKFVELLEQGWRERADQRTQRAKQFRKDMEFMAARA 398
           K+KFVELLEQGWRERA+QR ++A + RKDMEFM ARA
Sbjct: 361 KNKFVELLEQGWRERAEQRREQANERRKDMEFMGARA 397

BLAST of CcUC09G169630 vs. TAIR 10
Match: AT3G63090.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 552.0 bits (1421), Expect = 5.5e-157
Identity = 271/387 (70.03%), Postives = 320/387 (82.69%), Query Frame = 0

Query: 9   FSYLRSFKSAQPSFLSREIVFQIRSISSLKVIWRKDHRLDEAIENDKRYKLCARVVREVL 68
           +  ++S K A+   L      QIR ISSLKV+W+KD RLDEAIE DKRYKLCARVV+EVL
Sbjct: 10  YEIIKSLKHAKEHSLG----IQIRWISSLKVVWKKDTRLDEAIEQDKRYKLCARVVKEVL 69

Query: 69  NEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNPGLFDTYYDRIKPKSEPVLFLRASDRLR 128
           NEPGQVIP+RYLEKRR+RLRL     +F+  NP LF+ YYDRIKPKS+PV FLR + RLR
Sbjct: 70  NEPGQVIPLRYLEKRRERLRLTFKAKSFVEMNPSLFEIYYDRIKPKSDPVQFLRPTPRLR 129

Query: 129 GFLEEEKRITMENEGLIVSKLCKLLMISKHKMLSVDKLVHVKREFGFPNDFLVNLVPKYP 188
            FL+EE+RI  ENE L+VSKLC+LLM++K K++S DKLVHVKR+FGFPNDFL+ LV KYP
Sbjct: 130 AFLDEEQRIYSENEPLLVSKLCQLLMMAKDKVISADKLVHVKRDFGFPNDFLMKLVQKYP 189

Query: 189 EYFQIVGSPGEGKSFLQLVSRNPDFAKSVIERRAEDESISTGIRIRPNFDYKLPPGFILR 248
            YF++ G P EGKSFL+LVS NPDFAKS IE RAEDE++ TG+RIRPN++ KLP GF LR
Sbjct: 190 NYFRLTGLPEEGKSFLELVSWNPDFAKSKIELRAEDETLKTGVRIRPNYNVKLPSGFFLR 249

Query: 249 KEMREWVRDWLELDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIPVPTLGKF 308
           KEMREW RDWLE DYISPYE+VSHL Q+S EMEKRTVGV HELLSLSL KR+PVPTLGKF
Sbjct: 250 KEMREWTRDWLEQDYISPYEDVSHLDQASKEMEKRTVGVVHELLSLSLLKRVPVPTLGKF 309

Query: 309 SDEYRFSNAFSSVFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVIKDKFVELL 368
            DE+RFSNAFSSVFTRHSGIFY+SLKGGI+TA+LREAY+ D+L+D DPLL IKDKF+ LL
Sbjct: 310 CDEFRFSNAFSSVFTRHSGIFYLSLKGGIKTAVLREAYKDDELVDRDPLLAIKDKFLRLL 369

Query: 369 EQGWRERADQRTQRAKQFRKDMEFMAA 396
           E+GW+ER D+   + +Q +KD E M A
Sbjct: 370 EEGWQERKDRLKLQREQVQKDREMMLA 392

BLAST of CcUC09G169630 vs. TAIR 10
Match: AT2G31290.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 193.4 bits (490), Expect = 5.0e-49
Identity = 115/341 (33.72%), Postives = 186/341 (54.55%), Query Frame = 0

Query: 42  RKDHRLDEAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNP 101
           +KD  L+ A+  +KR+ + +R+   +L  P QV  I++L+K+ + L L      +L   P
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 102 GLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKML 161
             F  Y +  +       + R +  +   +EEE+ +    E ++  +L KLLM+S ++ L
Sbjct: 89  CCFHVYLENDE------YYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148

Query: 162 SVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSF-LQLVSRNPDFAKSVIER 221
           +V KL   KR FGFP+D+++ +VPKY + F++V   G   S  ++L+   P+ A S +E 
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208

Query: 222 RAEDESISTGIRIRPNFDYKLPPGFILRKEMREWVR--DWLELDYISPYENVSHLAQSSP 281
            A+           P+F   LP  +      + W R  ++    YISPYE+   L + S 
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268

Query: 282 EMEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIE 341
           E EKR+VG+ HELLSL+L+K++ +  L  F  E+      + +  +H GIFY+  K  + 
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328

Query: 342 TAMLREAYEGDKLIDCDPLLVIKDKFVELLEQGWRERADQR 380
           T +LRE Y G +LI  DPL+V+KDKF EL++QG  E   +R
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRR 352

BLAST of CcUC09G169630 vs. TAIR 10
Match: AT2G31290.2 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 193.4 bits (490), Expect = 5.0e-49
Identity = 115/341 (33.72%), Postives = 186/341 (54.55%), Query Frame = 0

Query: 42  RKDHRLDEAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVNAFLSFNP 101
           +KD  L+ A+  +KR+ + +R+   +L  P QV  I++L+K+ + L L      +L   P
Sbjct: 29  KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQGKALNWLKKYP 88

Query: 102 GLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHKML 161
             F  Y +  +       + R +  +   +EEE+ +    E ++  +L KLLM+S ++ L
Sbjct: 89  CCFHVYLENDE------YYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRL 148

Query: 162 SVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSF-LQLVSRNPDFAKSVIER 221
           +V KL   KR FGFP+D+++ +VPKY + F++V   G   S  ++L+   P+ A S +E 
Sbjct: 149 NVVKLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA 208

Query: 222 RAEDESISTGIRIRPNFDYKLPPGFILRKEMREWVR--DWLELDYISPYENVSHLAQSSP 281
            A+           P+F   LP  +      + W R  ++    YISPYE+   L + S 
Sbjct: 209 AAKK------CGSEPSFSCSLPSTW-----TKPWERFMEFNAFPYISPYEDHGDLVEGSK 268

Query: 282 EMEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMSLKGGIE 341
           E EKR+VG+ HELLSL+L+K++ +  L  F  E+      + +  +H GIFY+  K  + 
Sbjct: 269 ESEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVH 328

Query: 342 TAMLREAYEGDKLIDCDPLLVIKDKFVELLEQGWRERADQR 380
           T +LRE Y G +LI  DPL+V+KDKF EL++QG  E   +R
Sbjct: 329 TVILREGYNGSELIHKDPLVVVKDKFGELMQQGLYEYNHRR 352

BLAST of CcUC09G169630 vs. TAIR 10
Match: AT4G01037.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 183.0 bits (463), Expect = 6.8e-46
Identity = 117/336 (34.82%), Postives = 184/336 (54.76%), Query Frame = 0

Query: 42  RKDHRLDEAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRLRLNVSVN--AFLSF 101
           RK+   D  ++ DK+ KL   + + ++++P +++ +R L K R+ L L       A L  
Sbjct: 79  RKELTFDSVVQRDKKLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRK 138

Query: 102 NPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITMENEGLIVSKLCKLLMISKHK 161
            PG+F+     ++  +  + F   S+  R +L +E RI  E E ++V KL KL+M+S  K
Sbjct: 139 YPGVFEI----VEEGAYSLRFKMTSEAERLYL-DEMRIRNELEDVLVVKLRKLVMMSIDK 198

Query: 162 MLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIVGSPGEGKSFLQLVSRNPDFAKSVIE 221
            + ++K+ H+K + G P +F   +  +YP+YF++V +P  G + L+L   +P+ A S  E
Sbjct: 199 RILLEKISHLKTDLGLPLEFRDTICQRYPQYFRVVPTP-RGPA-LELTHWDPELAVSAAE 258

Query: 222 ------RRAEDESISTGIRIRPNFD-YKLPPGFILRKEMREWVRDWLELDYISPYENVSH 281
                 R  E E  +  I   P F+  KLP G  L K     +  + ++ YISPY++ SH
Sbjct: 259 LSEDDNRTRESEERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSH 318

Query: 282 LAQSSPEMEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSSVFTRHSGIFYMS 341
           L   + E EK   GV HELLSL+  KR  V  L  F +E+RFS     +  RH  +FY+S
Sbjct: 319 LRSGTLEKEKHACGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVS 378

Query: 342 LKGGIETAMLREAYEGDKLIDCDPLLVIKDKFVELL 369
           LKG  ++  LREAY   +LID DPL ++K+K   L+
Sbjct: 379 LKGERDSVFLREAYRNSELIDKDPLTLVKEKMRALV 407

BLAST of CcUC09G169630 vs. TAIR 10
Match: AT4G24320.1 (Ubiquitin carboxyl-terminal hydrolase family protein )

HSP 1 Score: 172.2 bits (435), Expect = 1.2e-42
Identity = 111/377 (29.44%), Postives = 181/377 (48.01%), Query Frame = 0

Query: 30  QIRSISSLKVIWRKDHRLDEAIENDKRYKLCARVVREVLNEPGQVIPIRYLEKRRQRLRL 89
           Q R+  + +V W  DH LDEA++ +K  K    +   +++ P + +P+  L   +  + L
Sbjct: 14  QRRTFVNARVKWVSDHYLDEAVQREKNLKQVISLKDRIVSSPSKSLPLSSLSLLKPLVNL 73

Query: 90  NVSVNAFLSFNPGLFDTYYDRIKPKSEPVLFLRASDRLRGFLEEEKRITME--NEGLIVS 149
           +++  AF    P +F T+    +P     L +R + +     +EE+ I +      + V 
Sbjct: 74  HITAAAFFQKYPSVFTTF----QPSPSHPLHVRLTPQALTLHKEEETIHLSPPQRNVTVQ 133

Query: 150 KLCKLLMISKHKMLSVDKLVHVKREFGFPNDFLVNLVPKYPEYFQIV----GSPGEGKSF 209
           +L K LM++    L +  L   + + G P D++ +L+  YPEYF++        GE    
Sbjct: 134 RLTKFLMLTGAGSLPLYVLDRFRFDLGLPRDYITSLIGDYPEYFEVTEIKDRLTGEKTLA 193

Query: 210 LQLVSRNPDFAKSVIERR---AEDESISTGIRIRPNFDYKLPPGFILRKEMREWVRDWLE 269
           L + SR  +   S +ERR    +   +  G+RIR  +    P G+ L K ++ WV  W  
Sbjct: 194 LTISSRRNNLPVSEMERREATIDGSRVKKGLRIR--YSMNFPKGYELHKRVKNWVEQWQN 253

Query: 270 LDYISPYENVSHLAQSSPEMEKRTVGVFHELLSLSLFKRIPVPTLGKFSDEYRFSNAFSS 329
           L YISPYEN  HL   S + EK  V V HELL L + K+     +    +   F   F  
Sbjct: 254 LPYISPYENAFHLGSYSDQAEKWAVAVLHELLFLLVSKKTETDNVICLGEYLGFGMRFKK 313

Query: 330 VFTRHSGIFYMSLKGGIETAMLREAYEGDKLIDCDPLLVIKDKFVELLEQGWRER----- 389
               H GIFYMS K   +T +LREAY    L++  PL+ I+ +++ L+ +  R +     
Sbjct: 314 ALVHHPGIFYMSHKIRTQTVVLREAYHKVFLLEKHPLMGIRHQYIYLMSKSGRGKKRDYV 373

Query: 390 -ADQRTQRAKQFRKDME 392
              +R+ R K+  K  E
Sbjct: 374 HGVERSNRKKRVIKACE 384

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038899043.15.5e-20792.93protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Benincasa hispida][more]
XP_004136063.11.3e-20088.92protein WHAT'S THIS FACTOR 1 homolog, chloroplastic [Cucumis sativus] >XP_031744... [more]
KAG7014426.11.4e-19988.66Protein ROOT PRIMORDIUM DEFECTIVE 1, partial [Cucurbita argyrosperma subsp. argy... [more]
XP_022953521.11.9e-19988.66protein WHAT'S THIS FACTOR 1 homolog [Cucurbita moschata] >XP_022953522.1 protei... [more]
KAG6575893.14.2e-19988.41Protein WHAT'S THIS FACTOR 1-like, chloroplastic, partial [Cucurbita argyrosperm... [more]
Match NameE-valueIdentityDescription
A0MFS59.5e-4534.82Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Arabidopsis thaliana OX=3... [more]
Q65XL53.1e-4334.42Protein WHAT'S THIS FACTOR 1 homolog, chloroplastic OS=Oryza sativa subsp. japon... [more]
B6TTV85.8e-4232.34Protein WHAT'S THIS FACTOR 1, chloroplastic OS=Zea mays OX=4577 GN=WTF1 PE=1 SV=... [more]
Q689D62.6e-3427.43Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Arabidopsis thaliana OX=3702 GN=RPD1 PE=1... [more]
Q9ZUZ63.5e-2324.27Protein WHAT'S THIS FACTOR 9, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=W... [more]
Match NameE-valueIdentityDescription
A0A0A0K5596.3e-20188.92PORR domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G392430 PE=4 S... [more]
A0A6J1GN709.1e-20088.66protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita moschata OX=3662 GN=LOC1114560... [more]
A0A6J1JZH37.7e-19987.66protein WHAT'S THIS FACTOR 1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111488826... [more]
A0A1S3BS571.3e-19887.66protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo OX=3656 GN=LOC103492691 PE=4... [more]
A0A5D3DBW61.9e-19787.15Protein ROOT PRIMORDIUM DEFECTIVE 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5... [more]
Match NameE-valueIdentityDescription
AT3G63090.15.5e-15770.03Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT2G31290.15.0e-4933.72Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT2G31290.25.0e-4933.72Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G01037.16.8e-4634.82Ubiquitin carboxyl-terminal hydrolase family protein [more]
AT4G24320.11.2e-4229.44Ubiquitin carboxyl-terminal hydrolase family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021099Plant organelle RNA recognition domainPFAMPF11955PORRcoord: 43..372
e-value: 2.7E-102
score: 342.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 490..512
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..517
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 470..484
NoneNo IPR availablePANTHERPTHR31476:SF3UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEINcoord: 26..401
IPR045040PORR familyPANTHERPTHR31476PROTEIN WHAT'S THIS FACTOR 1 HOMOLOG, CHLOROPLASTICcoord: 26..401

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G169630.1CcUC09G169630.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0016787 hydrolase activity
molecular_function GO:0003723 RNA binding