CcUC09G169580 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G169580
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 5746010 .. 5748611 (-)
RNA-Seq ExpressionCcUC09G169580
SyntenyCcUC09G169580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTTGTGAGTGTATGGCCAGGAACTGATTGATGATATGGCCACACAGGTCGGGATCCCAGTCGAGGCAAGCTCCGAGATTGTACATCAGAAGACATATCAGAAGACATAGCAGGCAAGTGCCAAAATTCCCAATCTTGTTCCTTCATTCCCATTGTCTCTGTTACACACTCATGTTGTGAATGCCAATCAAACTGTCTGTCATCTTCATTGTTACCATCACATTCAATGCCACCATGTTCGATCTTCGAACCACTCTTCGAATGGTCAGTGGCTTCGTCCTTGCAGTCAGGTTCCTTTTGAAAGAACCAAAGCTTGGCTTCTTTGCCCACTGCTTTTATTTTTTGTAAGAGCACAACAGGGTCAATGTCACCTTATACTGTTACCAGCCCTTTATATGGGTCTATAGAAACAGATTCCACTCCTACCACAGTAAATTCACATAGGAAGGGGAAAAAACTCAATACAACTGAAGGGTAAATGCAAGTTCTATACTGTGGTGAAATAGATAAAGATTGAAATGTTTCTTATTAAAATGAAAAAAAGAAAAAGAAAAAAAAATTGGGTCTAGTTTTCATTTGGTTCCTAGATTTCAAAATGTTACATTTTTACTTTTTTGAGTTTAGTTTCTATTTGGTCGTTAGATTTCAAAATGTTACATATTTACCTTTGAGTTTTGAGTTAAGTTTTTATTGGTCCGGAGATTTCAAAACACCATATTTTTATCCTCAAGTTTTTAGTCCTAGAACTTCAAGATTTAATACTGTCGGTTCTAATGTCTATTTAATCATTTAAAAAAACTAAAAGAATTACAATTAAATTAGTTTTTACCAATTTTCTATCATTATTAAAATTAATAGAAAATTTCACATCATAATTATTTCAAATTAATTAATTGAAAATAAAACCAGAGTACTTAGTAAAAACTTGCAAAAACTTGCAGGTAATAACATAAAATATTGAAATCTAGAGACCAAATGAAAATTATACTCATGACTCAAAAGTAAAAATGTACCATCTAGAAACTTAGGAACGAAATGAAAATTAAATTCAAACTCAAAGTAACATTTTAAAACATATAAAGACCAAATAAAAATAAAACTCAAAATCTAGGGACTAAAACGATATTTTTCCTTCTAGGGTCGTACCAGTTGATTTGAGGAGCTTCCTTTCTAGCTTTAGAGGGCACTTTTGACAGCAGTTGATATTCATTTTTAATGTACAAATCTGCAGATTAAGTTAGGAGAAGAAATATAAAAGAGAAGGGAAGGAGAAGAATTAAGAAAAGAAGAAATAATAACTGAAAAGTGCTTAATGAAGAAGATGGTGTTTCATCATCCGCCATTGGAACTGATTTAATGAGCAAAACTGAGAGGAAGAGAGATTTTCTATGAAAAGCACAAACAGAAAGTGCTTTTCTTTCGTGCTTGTCATATTTAAAGAAGAGAGGTAGGATTTATGGAAAGAAATTTATTTTAGCTAATAATAAAAAGCCTTTTAAATTAAGAAATTTATTATCATTATGCTACATATCAAAATAGGGTTTGATTTGAGCTGAAACCTGATTTGAAGTTATCAAAACAATATATCACATTTAATGACACTGTTAAATTATGAATAAACTGATGTAGGGGAAAATAAAGGTTAATCATGTGATTTTTTTCTTAATTAAATTGGGTGAAAATTTGAGTTTCTCAAACATGTTTGGCTCTACATCACTTCTCAAGATATATTTGAATATATATTTGATAAAGACTCAACTAGTTTAGATACAGACTCTCGACTGAAGTTTTTGGTTAGACTGCACTTAAGTTAAATGCTCTTCACTTTTTAACCACAAAAAGAATTATTATTTCTTTTAAAAAAATATGTTAACACATATCAACATTTAATTGAGTACAAGAGATGGGTGCAGCCCGAAGTGCACCTAAGTTTTTTCCTTAGTTAGAATCCTTCCAAATTCACATATTGAACTAAAACAAAACAATCCCAACATGTTACAAAGATTTTCAAAATACATACAAAAAACAGAAAGATAAAAAAGGGATGATGGATTGAACATTGAACATCAAATTTGGAAATGAAAATTGGTGTCTTATCCACTAAATTATGCTCGAAAGCTCTAAAGATAAATATTGATAGCTTACCTAACCAATATTCTATTTCAAACTGTCAACATAAACCTGCTCAGTAACAAGTCATTGCCTAAACAATCATACACCCGTCTGTATTCTCGTCGTTGAATAGGTAGTGCCCCGGCGCATTCCCCACCGGTGGCGGTTGCTCTTGCAAATAATAAGGTAGGGGTTCCGACCACCGATAATATCTATGTGCCGGTGGCATTGGTGGCATCGGCGGCGGTGGCGACATCGATTCCGAAATTCGAGGCCAAGAACCATGACTTCCACGAAAACCCACACCTCCATATTGCGACACCGGCCGCATAAACTGCTGGTTGTGGAGTGGCAAAGCCACTGGCGGATTGACGGCGGCCGCCTCGTTGATGTGAACCTTGTCGGAACAGCCATGGTGGTCGGAAAAATGGCTGGAGTCGGAATTGCCATATTTAGTCCTGTCAATTTTGTGGCAGCGATTGTCTGA

mRNA sequence

ATGAGTCGGGATCCCAGTCGAGGCAAGCTCCGAGATTGTACATCAGAAGACATATCAGAAGACATAGCAGGCAAGTGCCAAAATTCCCAATCTTGTTCCTTCATTCCCATTGTCTCTGTTACACACTCATGTTGTGAATGCCAATCAAACTGTCTGTCATCTTCATTGTTACCATCACATTCAATGCCACCATGTTCGATCTTCGAACCACTCTTCGAATGGTCAGTGGCTTCGTCCTTGCAGTCAGGGTCAATGTCACCTTATACTGTTACCAGCCCTTTATATGGGTCTATAGAAACAGATTCCACTCCTACCACAGTAAATTCACATAGGAAGGGGAAAAAACTCAATACAACTGAAGGTGCCCCGGCGCATTCCCCACCGGTGGCGGTTGCTCTTGCAAATAATAAGGGGTTCCGACCACCGATAATATCTATGTGCCGGTGGCATTGGTGGCATCGGCGGCGGTGGCGACATCGATTCCGAAATTCGAGGCCAAGAACCATGACTTCCACGAAAACCCACACCTCCATATTGCGACACCGGCCGCATAAACTGCTGGTTGTGGAGTGGCAAAGCCACTGGCGGATTGACGGCGGCCGCCTCGTTGATGTGAACCTTGTCGGAACAGCCATGGTGGTCGGAAAAATGGCTGGAGTCGGAATTGCCATATTTAGTCCTGTCAATTTTGTGGCAGCGATTGTCTGA

Coding sequence (CDS)

ATGAGTCGGGATCCCAGTCGAGGCAAGCTCCGAGATTGTACATCAGAAGACATATCAGAAGACATAGCAGGCAAGTGCCAAAATTCCCAATCTTGTTCCTTCATTCCCATTGTCTCTGTTACACACTCATGTTGTGAATGCCAATCAAACTGTCTGTCATCTTCATTGTTACCATCACATTCAATGCCACCATGTTCGATCTTCGAACCACTCTTCGAATGGTCAGTGGCTTCGTCCTTGCAGTCAGGGTCAATGTCACCTTATACTGTTACCAGCCCTTTATATGGGTCTATAGAAACAGATTCCACTCCTACCACAGTAAATTCACATAGGAAGGGGAAAAAACTCAATACAACTGAAGGTGCCCCGGCGCATTCCCCACCGGTGGCGGTTGCTCTTGCAAATAATAAGGGGTTCCGACCACCGATAATATCTATGTGCCGGTGGCATTGGTGGCATCGGCGGCGGTGGCGACATCGATTCCGAAATTCGAGGCCAAGAACCATGACTTCCACGAAAACCCACACCTCCATATTGCGACACCGGCCGCATAAACTGCTGGTTGTGGAGTGGCAAAGCCACTGGCGGATTGACGGCGGCCGCCTCGTTGATGTGAACCTTGTCGGAACAGCCATGGTGGTCGGAAAAATGGCTGGAGTCGGAATTGCCATATTTAGTCCTGTCAATTTTGTGGCAGCGATTGTCTGA

Protein sequence

MSRDPSRGKLRDCTSEDISEDIAGKCQNSQSCSFIPIVSVTHSCCECQSNCLSSSLLPSHSMPPCSIFEPLFEWSVASSLQSGSMSPYTVTSPLYGSIETDSTPTTVNSHRKGKKLNTTEGAPAHSPPVAVALANNKGFRPPIISMCRWHWWHRRRWRHRFRNSRPRTMTSTKTHTSILRHRPHKLLVVEWQSHWRIDGGRLVDVNLVGTAMVVGKMAGVGIAIFSPVNFVAAIV
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 99..127

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G169580.1CcUC09G169580.1mRNA