CcUC09G169120 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G169120
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 5323045 .. 5327758 (-)
RNA-Seq ExpressionCcUC09G169120
SyntenyCcUC09G169120
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGAATGGAGATGGTAGTAGGTACAATGCCCTTTATACTATTCACTGCTCCTAATGTAGGTCGCTGTGTCAATAACATAATTTGCAGCTCTAATTTAAATGGAGTGAGGTACATTTTACAGAGGCAGAGGGAACTCCATTGCCATTCATTTTATACTTTGGCTGAGCTGTGGGGGGATGGATAGACAAGCATTTAGTGATCAATAAAGATAGCAAAGTTTCTTCTTCCTTTTCTTCATTGTACTGTACCCAAAAACAGATTTATGGTGAATTTGCAAGTCACCCACCCTGTATACTATGGGCAGAATCTTTTGCTTGTATGTTAATTATTAGACATTCATTTCAGATTTCAACTGAACTTAGTTCTTGTCCTCTAATTCCATTCCTGATTTCTCATTGACTTATCATTCATCACTCTATAATCCACTGGGAGGTTGGATTACAAGGAGAAATATGGCCCAGAGAATTGAAACTCCAGCTACTGACTGAGTGACTTCAGATTTTCAATAGGTAAATCCTTCCATTTAGAATAAGATGAGATGAGATGATATATAGAGTAAAGCATATAGAAGGAATTCTGTTGAGACTTTGGAATCTGTGTCAAAATTATGAAGATGAGGGAGAAGGAAGAAAAGGAATCCTTGTTTACTCTGGAGAAAAGAGGAGAGAGAAAGCCTTTCTCGACTGACGAGCTAGGCAGTAGATTGAAAGCATTTTTTTTTCCTTTTTTTTTTTTTTTTGTTGATGGGATTTCTATATTTAGCAGTCAGAAGCCAAAACACCTGAAGGAGATGACCAAAACAAAAAACGATCAGAGTATTTAAAGACCCAATTTCTTGTTAAAAGCTTATTAATTGGCCACAGCCTGACTTTCTGAGTAGAAGAGAGAGAGAAAGTGTTTTGATGAGGCAGAGTGAAAGTAACAGAACACAGAAGCAGAGGCAGAAGGGCAGAAGAGAGCAGATTTTTGAAATGTGAGGGAAAAAGAAAAAGGAGGAAAAAAGTTAAAGGAAAAGGAAAAAAGAGGTCAAAGAGACGAATCTGTTTCTGTGAAAAAGTGGGTTTGTGGTTTGTCAATTTGCAGACAGATTTATTGGTTGATGATGCCCACACGTTCTTCCTCTTCTTCTTCATTTCTCCTTTTTTTTTTTTTTAGTCATTATACCTTTATTTTATCCTCTCTAAAAGATACATATGAATATGCAATAATATTATTGTTTATTAGGTCAAGTTGTAAGTTTAGGCATTCCCTTTTCCTCTAGTTTGGTTTAGTTATTCAACTTTGAATCTTGTGTTAATTTAACTTTTTGGTATGATTTTGAGCTTCTGGTTTTGGTTTCAAGAAGGATTGAACGAAGAAGAATGCAAGAAGAAAAAAAAATCAATTTTGACCCTAGTAAGATTCAATTTTGCTAATTTGGCCACTAATAATCAAAACATATTCTCATTACTATTGTAGATGAGAATCTCATAACGAAGACCTCGGATGGATTGAGTTTGATTTTAGAGTTCTTTTAAAAAATATTTGTAAAAATAGGGCACTCTACTTCATTTGCCTTATTCATTTCACTTTTCTTGTTTTTTTAACCAATTAGCCGTCTTTTTGTTCAATTTTTTTTCATTATTAATATATATATATATTTCTATCTTTTATAATTTTTTTGTTTTACATAATTCTTGCAAATAGTTTAAATAGCTTCATTTTTTGCAAATAGTGTGTAGAGTATCCTATTTTTATAAATATTTTTTAAAAGAACCCTAAAATAACACTTAATCCCCGCGACATCGATCATGTTCACGAGCATTTGAAGTCGAGTTCATAATTTTATACAATCATTCTCCACATTATCGGAAAAAAATATTTAATGTGTTTGTCCCCTTTAATTCTTCGATCCAAAATTAATCCAAAACTTTGTTAGGTAGCTCTACATCTAACCATAAAATTATGGGATAACAACACATAAGACCTTGATAAAGACTCTATATTTTAATTATGTCTAACTTTCCATTAATTATAAAAATGTCTAAGTTAGCTTTAAAATAAAAAAAAAAAAAAAGGGCCGAATTACCATTTAAAATTACAAATGTATCAATTTACACCTTCGGATTTAGTTTGAAAAATATCATGCAAATCATTTAAGTTTTTCAATTAAACTTATAAATTGTTGTAAGTGAATCAATTTAAAACATTTATTAGAAATATATTTAAAAATCGTCAATGCATAAACTCTTCTACGTGTGTAGATTTGTACAAATGTCGATTTAACAAAATTGACAATTATAATTTGAATGGACAATTTTCAAATAAATCTTAATTGAGAGTCTAAATTAATTTCCTCATCTAAGTTTAGAGATTTAATTAATAAAATTACTAGTTTCACACAATATATATCCAATTAAGACATAATAAAGGGTTTAAATTGATATACTTATTAGTTTATGGTTTAAATTGATAAAACCTCTAAAGACCAGGGATGTAAATTGATATTTGGCATAAATTTTATTTTATTTTTTGCCTAAAAGAATCTCTTGTTATCTCCCGATTCAATTCCAAACTATATAAGCTACTTTTTTCTCTTTTGTTGTGTGAGATTAGTCAAAGTGCGCATAAATTGAGCATAACACAAGAATATATGAAAATAAAAGGAAAATGAACTACTGAAAATATTTATAACTAATAGCAAAATATACCACCTATCGCAGTCTATTGCAGATAAACAGTGAAATTTTTCTATATTTGTAAATATCTTGATTCTTTTTGCTATATTTTGAAAAGCTTCAAATAAAAGTAGACTTATTTTTTCTAAGTGCAAGTCAATACACTTTTAATTATCAACACCTAATTAAAAATTCTTCGAAAATTTCCAACACCTAATAAAAATCACTCACAAAATTAAAATTCCCAACACCTAATTAAGAATCATACCAAGAAATTTTCTCAAAAGAGTGGGGGCAAAAAGATGAAAAAGAATAATCAAATCTCTCTCTAGAATTTTCAAAGTTGTTTGGTTTTCCACGGTATTATATTTCAATTTCCCTAATTAAAGAGTTTATTATTTTTTGTCTTTTTTGGGTTTGACTCAAATAAAAACATTGAGTAGGTTTGAATTTACCTTATCATTTTAATCAAAATTTTGTCATATGGACCTTTTTTTTTTTTTGTTAGATACTATAATTGAATCTATTAAAAAAAAAAAAAAAAACTAATTCATTAATTCATAAAAATTTGTCTTCTTTCCTCCATTATATTGTTGTATCATTTTGTATAGGCTCTACTTGATACATATCAATTTCATGATTTATTTAAATTATTTTATCGTAGGCCTAATTAGTATTATGGTTCGAATCATAATTTGCTTTATATTTTTTAATTCAACCTGTGGGGGAAAGATTTTGACATCCCAACTTCTAATTGAAGTATATATCTAAACACCACTTTTAAATTTGGAAAATTATTTTAAATGATAAAACTGTTAAAATTTTTTTACAAATAATAGCAAAATATCACCATATATCTGTAATAAACTACAATAGATCATGATAGACTACTATTTGCATCTATCATGAAGCAGATAGACACAAATAGTAGTCAATCGCAAATAAATAGTGAAAATTTTCTATTTTTGTAAATATTTTGATTCATTTTCCTAAGTTGTTCGCAAGGGCCAACTTGATCCTCTTCCCCAGGGATCCCAGATGAGGGAACCCTAGGAGAGCCGCCGACTCCAACTACCGTCCATGTACGATCCATACTAGATCTAACCATTTAAAAATAGTTCGAATGTGCAAAGATATGTACGTGCTTATTAAAAAAAGGCAACTTTTCTGAATTCTTTTTCCCTATTTCTATCTTATTGATTATGTTAATGAAATTTTAATTGATTCAAATATTTTAATAACAATGGTTTCTATTAGACTTTTATCAAATAACTTACATTAAACAAAACAACTAACAATTTAAATAATATAATAATTTAAACGATTAACTTATAAAATAGAAATTAGATATCAATAAAATAGTAATCGAAACACTATGTCTACTTTCATCATTATAGACAAATTCAAACAATTTTCTACTATTCTATCAAACAATAATTTACGTTCGGGTAAAAATTAGTAGTAATTTTCATGAAAAATACAAAACACTGGCATATTATATTCTTATTTTATTTATTCTTTTGAATTCAACAATTACGAAGTAGAAGGATCGAATTACTAACATTTAGAATGATAATTGGTGTCTTATGCACTAAGGTATGTGTTGACCTAACACGTTAAACAACGTTTTATATATCTTGAACTGGACTCGCTACGCTACAAAATGTGACAAATAAAAAGGAAAGGATGCCCAATTGCTAAGCTAAAGAGCATAGAGAAGAACAAAAAATTAACAAAGACTTGAGACTTTTCTGAAGTCTACCACGGTCACATGGGGGCCCTCCTTTTACATCAGCTATTGACATTGACACAAATGTTTATTTCTTTATTAATCAGAGGAAATTGGTTCAATATGCTCAAATTTGAGGCTTTGTTGGGAAGGAAGTTATTTCTTTTTGCTCTGTAAATTTGATGGGGAAGCTTTGTTGCTCTGGTGATGATGATGGTGGATTGGATCTTATGGGAATTTTGATGGCCATTGTTATAGCTCTCACCCTCATGCTCATCTGCCAGCCTCAACCACGCCGAGTTTATGTTTTGCATCGTTGGCCTTGA

mRNA sequence

ATGGGAATGGAGATGGTAGTAGACAAGCATTTAGTGATCAATAAAGATAGCAAAGTTTCTTCTTCCTTTTCTTCATTGTACTGTACCCAAAAACAGATTTATGGTGAATTTGCAAGTCACCCACCCTGTATACTATGGGCAGAATCTTTTGCTTATACATATGAATATGCAATAATATTATTGTTTATTAGGTCAAGTTGCTTTGTTGGGAAGGAAGTTATTTCTTTTTGCTCTGTAAATTTGATGGGGAAGCTTTGTTGCTCTGGTGATGATGATGGTGGATTGGATCTTATGGGAATTTTGATGGCCATTGTTATAGCTCTCACCCTCATGCTCATCTGCCAGCCTCAACCACGCCGAGTTTATGTTTTGCATCGTTGGCCTTGA

Coding sequence (CDS)

ATGGGAATGGAGATGGTAGTAGACAAGCATTTAGTGATCAATAAAGATAGCAAAGTTTCTTCTTCCTTTTCTTCATTGTACTGTACCCAAAAACAGATTTATGGTGAATTTGCAAGTCACCCACCCTGTATACTATGGGCAGAATCTTTTGCTTATACATATGAATATGCAATAATATTATTGTTTATTAGGTCAAGTTGCTTTGTTGGGAAGGAAGTTATTTCTTTTTGCTCTGTAAATTTGATGGGGAAGCTTTGTTGCTCTGGTGATGATGATGGTGGATTGGATCTTATGGGAATTTTGATGGCCATTGTTATAGCTCTCACCCTCATGCTCATCTGCCAGCCTCAACCACGCCGAGTTTATGTTTTGCATCGTTGGCCTTGA

Protein sequence

MGMEMVVDKHLVINKDSKVSSSFSSLYCTQKQIYGEFASHPPCILWAESFAYTYEYAIILLFIRSSCFVGKEVISFCSVNLMGKLCCSGDDDGGLDLMGILMAIVIALTLMLICQPQPRRVYVLHRWP
Homology
[Close]
BLAST of CcUC09G169120 vs. NCBI nr
Match: OMO98386.1 (hypothetical protein COLO4_13926 [Corchorus olitorius])

HSP 1 Score: 62.0 bits (149), Expect = 4.3e-06
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 82  MGKLCCSGDDDGGLDLMGILMAIVIALTLMLICQPQPR-RVYVLHR 127
           MGKLCC   DDGGLDL GI+M ++IAL LM IC PQPR  VY ++R
Sbjct: 1   MGKLCCMESDDGGLDLTGIIMVLIIALALMAICIPQPRPTVYAVYR 46

[Close]
BLAST of CcUC09G169120 vs. NCBI nr
Match: KAG8653793.1 (hypothetical protein MANES_05G067701v8 [Manihot esculenta])

HSP 1 Score: 57.4 bits (137), Expect = 1.1e-04
Identity = 29/46 (63.04%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 82  MGKLCCSG-DDDGGLDLMGILMAIVIALTLMLICQPQPRRVYVLHR 127
           MGKL CS   +  G+DL G+LMA+VIAL LM+IC P PRR YV+HR
Sbjct: 1   MGKLVCSEVSEVEGVDLTGLLMALVIALVLMVICNPPPRRTYVMHR 46

[Close]
BLAST of CcUC09G169120 vs. NCBI nr
Match: KAA8527492.1 (hypothetical protein F0562_034793 [Nyssa sinensis])

HSP 1 Score: 57.0 bits (136), Expect = 1.4e-04
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 81  LMGKLCCSGDDD---GGLDLMGILMAIVIALTLMLICQPQPRR 121
           +MGKLCCS  DD   GGLDLM IL+ IV+AL LM+IC P PR+
Sbjct: 337 VMGKLCCSDSDDDGGGGLDLMSILVVIVLALVLMVICSPPPRQ 379

[Close]
BLAST of CcUC09G169120 vs. NCBI nr
Match: CAB4293360.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-04
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0 

Query: 56  YAIILLFIRSS--CFVGKEVISFCSVNLMGKLCCSGDDDGGLDLMGILMAIVIALTLMLI 115
           +A+ LL  R+S  CFV    +++ S+  MGK CCS DDDGG++L  +L+ IV+AL +M +
Sbjct: 333 FAMELLKFRASSLCFV---EVTYISILHMGKYCCSEDDDGGINLAAVLVVIVVALLIMTV 392

Query: 116 CQPQPRR 121
             P PRR
Sbjct: 393 FSPPPRR 396

[Close]
BLAST of CcUC09G169120 vs. NCBI nr
Match: CAB4262782.1 (unnamed protein product [Prunus armeniaca])

HSP 1 Score: 56.2 bits (134), Expect = 2.4e-04
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0 

Query: 56  YAIILLFIRSS--CFVGKEVISFCSVNLMGKLCCSGDDDGGLDLMGILMAIVIALTLMLI 115
           +A+ LL  R+S  CFV    +++ S+  MGK CCS DDDGG++L  +L+ IV+AL +M +
Sbjct: 355 FAMELLKFRASSLCFV---EVTYISILHMGKYCCSEDDDGGINLAAVLVVIVVALLIMTV 414

Query: 116 CQPQPRR 121
             P PRR
Sbjct: 415 FSPPPRR 418

[Close]
BLAST of CcUC09G169120 vs. ExPASy TrEMBL
Match: A0A1R3JU67 (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_13926 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 2.1e-06
Identity = 30/46 (65.22%), Postives = 35/46 (76.09%), Query Frame = 0 

Query: 82  MGKLCCSGDDDGGLDLMGILMAIVIALTLMLICQPQPR-RVYVLHR 127
           MGKLCC   DDGGLDL GI+M ++IAL LM IC PQPR  VY ++R
Sbjct: 1   MGKLCCMESDDGGLDLTGIIMVLIIALALMAICIPQPRPTVYAVYR 46

[Close]
BLAST of CcUC09G169120 vs. ExPASy TrEMBL
Match: A0A5J5ACA8 (Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_034793 PE=4 SV=1)

HSP 1 Score: 57.0 bits (136), Expect = 6.7e-05
Identity = 28/43 (65.12%), Postives = 33/43 (76.74%), Query Frame = 0 

Query: 81  LMGKLCCSGDDD---GGLDLMGILMAIVIALTLMLICQPQPRR 121
           +MGKLCCS  DD   GGLDLM IL+ IV+AL LM+IC P PR+
Sbjct: 337 VMGKLCCSDSDDDGGGGLDLMSILVVIVLALVLMVICSPPPRQ 379

[Close]
BLAST of CcUC09G169120 vs. ExPASy TrEMBL
Match: A0A6J5TH44 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2185 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0 

Query: 56  YAIILLFIRSS--CFVGKEVISFCSVNLMGKLCCSGDDDGGLDLMGILMAIVIALTLMLI 115
           +A+ LL  R+S  CFV    +++ S+  MGK CCS DDDGG++L  +L+ IV+AL +M +
Sbjct: 355 FAMELLKFRASSLCFV---EVTYISILHMGKYCCSEDDDGGINLAAVLVVIVVALLIMTV 414

Query: 116 CQPQPRR 121
             P PRR
Sbjct: 415 FSPPPRR 418

[Close]
BLAST of CcUC09G169120 vs. ExPASy TrEMBL
Match: A0A6J5VVI0 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS2205 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 31/67 (46.27%), Postives = 45/67 (67.16%), Query Frame = 0 

Query: 56  YAIILLFIRSS--CFVGKEVISFCSVNLMGKLCCSGDDDGGLDLMGILMAIVIALTLMLI 115
           +A+ LL  R+S  CFV    +++ S+  MGK CCS DDDGG++L  +L+ IV+AL +M +
Sbjct: 333 FAMELLKFRASSLCFV---EVTYISILHMGKYCCSEDDDGGINLAAVLVVIVVALLIMTV 392

Query: 116 CQPQPRR 121
             P PRR
Sbjct: 393 FSPPPRR 396

[Close]
BLAST of CcUC09G169120 vs. ExPASy TrEMBL
Match: A0A803Q5A6 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1)

HSP 1 Score: 56.2 bits (134), Expect = 1.1e-04
Identity = 25/45 (55.56%), Postives = 35/45 (77.78%), Query Frame = 0 

Query: 82  MGKLCCSGDDDGGLDLMGILMAIVIALTLMLICQPQPRRVYVLHR 127
           MGKLCCS +DD G+DL G+L+ IV+AL +M +C PQ +RV  ++R
Sbjct: 1   MGKLCCSSEDD-GIDLSGVLIVIVLALAIMAVCMPQQQRVVTVYR 44

The following BLAST results are available for this feature:
BLAST of CcUC09G169120 vs. NCBI nr
Match NameE-valueIdentityDescription
OMO98386.14.3e-0665.22hypothetical protein COLO4_13926 [Corchorus olitorius][more]
KAG8653793.11.1e-0463.04hypothetical protein MANES_05G067701v8 [Manihot esculenta][more]
KAA8527492.11.4e-0465.12hypothetical protein F0562_034793 [Nyssa sinensis][more]
CAB4293360.12.4e-0446.27unnamed protein product [Prunus armeniaca][more]
CAB4262782.12.4e-0446.27unnamed protein product [Prunus armeniaca][more]
BLAST of CcUC09G169120 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC09G169120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1R3JU672.1e-0665.22Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_13926 PE=4 SV=1[more]
A0A5J5ACA86.7e-0565.12Uncharacterized protein OS=Nyssa sinensis OX=561372 GN=F0562_034793 PE=4 SV=1[more]
A0A6J5TH441.1e-0446.27Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS2185 PE=4 SV... [more]
A0A6J5VVI01.1e-0446.27Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=ORAREDHAP_LOCUS2205 PE=4... [more]
A0A803Q5A61.1e-0455.56Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1[more]
BLAST of CcUC09G169120 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G169120.1CcUC09G169120.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0016021 integral component of membrane