CcUC09G169090 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGCTCGGTAATACCTACATATTTGTTTTAGTTTCTCGTATTTAATTATTTTTCAGTTCCTAATTGAAAACTATAATTTCATCCCTTACAATTAGGTTTTTCTCAAGTAAGTCCTTATTTTCGCACATAATTAGAATTAACCAACAGAATTATAGACAAAATACACTTTATTATTTATTGAGTTAAAAGTGTTCAGTTTTGCGTTTGCAAAAAGTACTCTCTCGAAGTAAAATAAATATATAATACATAATTCAAGTAGCATTATATTAAATTAATAATGATATGATTGAATTATAGAAATTAAAGCGGAAAAACTACTTGAATCATTTTCATACTTATAATTTATTAAAAAGCTAATATTTTTTCGGATAATTATTACAAACTAATTTTTCAATACTATTAAAAAAAGAAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAGACGGAGAAAAAATTGTTAAATAATATTACAATTTCTAGTTGTGTTCTCCTTTCTGAAACCAAGCCGAAGAACTCGAGCAGGGGAGACGGTGTCCAATGGAACAAGAAGACTTACCTGTGCCCCAATCTGCCGTTACAGAGGATTTCGGAAAATTGCAATACGGGTAGCTATTTCTTTCCCATTTCTTCTTCTTCTTCTTCTTCCTCGCCATCTTTACCGGTAACTTGTTTTCGATTTCAATTAGATGCGAGCATTACAGGAGGCGATGCAAAATCCGAGCTCCATGCTGCGACCGAATCTTTACCTGTCGCCACTGCCACAACGAGGCCATGGTCTTTCCTCTCTTCTCTCTCTTTCTTTCCGTTGCGTGCGTGTGTTTGTGAGAGATGTATATTAGAAAGGGTTATGCATATATGGTTAAATTCGAGCTTTCAGTAATTTTGTCTTGAAATTTTCTGAAACTTTCGTTGATTTTAGACCTCGCTGAGCAAGCCGGAGGACCGCCATGAACTTGTTCGCCAGGACATTAGACAAGTCTGTTTGTACGCTGTTCTACTGCATTTTTTTTCCTCTGTTATTTTTTATTTTTTATTATTTATTATTATTTTTTTTTGTTAATAGTATCACATCTTGTAAAGCATACCGCGATGGGATTTGATTAATTTTGTTGGAATCTATGCTTTAGGTGGTTTGCTTGATTTGCAACACAGAGCAAGAGGTTTGGGGGCTTTTCTTCTTGGCCTCTCATTCATTGTGTTTAATGTACTCCTGTTTCTGCTTTGTTAAGCGTTGAATTTGGTATATTTTAGGTTGCCAAGGTTTGTCGCAAATGTAATGTTAATATGGGAGAATACTTTTGCGACATCTGCAAATTCTATGATGATGATGTAGGAGAAGTTTCCACCAATCCATTTCTTTTCTTTGTTCTGTTTTTCTTTCTTTAAGAACTAATTTTCAAATCTTAAATGTGGAGCCGAATGGTTTTTGTTACCCTAAATGCTAATAGATTTTGCTATGAATGCAGACCAAGAAGAAGCAGTTTCATTGTGATGCATGTGGTATCTGTAGGTTAGTAGTGTGCATTTTTCCGGTTCTAATTCTAATGTAAACTCAGCTTTCTATGTTAAGTTTCTCAACACGACTGTTCGTATTATTTTCAGGGTTGGTGGTCGTGAAAATTTCTTTCACTGTGAAAGATGTGGTATGTTACTCAACTCTCTTCATGGTTCATTAGAAATTAGTATTGTGTTATTGACTTACTGTTTGAAGTACATGTAGCAGAAGAATATCTTTGGTTAATTCTGACTCGAACAAACTAGTAAAATGTGAATGATCGAACAAATAAACCATTCAGATAAATTAAAATCATATTGTCCACGCACTACATACAATTTCCATTAGATTTTTACTTGTGATCACAGATATTGTTTCATGGGTATGGGTAGTATCTAGGATTTAAATGTCTAAGATAATTAATGTATGTGATTTGCAGGATAATTACTGTCTAGGAGTTAGATATCTATGTTTGATATACCAAATTTGTATATAGATACTCAAATTAACCACTATGGGTTGGCCTAGTAGTAAATAGGAGACATGACCTTGATAAAGGGCTAAGAGGTTATGAGTTCAATCCATGGTGGCCACATACCTAGGATTTAATATCCTACAAATTTCCTTGACACTCAAATGTCGCAAAGTCAGGCTCATTGTCTCGTGGGATTAGTCAAGGTGCGCGCAAGCTAGCTAAGACACTCACATATACAAAAATTAATTAATTAAAACTAATCAGTAATGATTAATTGATATTGATTCATTAGTCAATTATGTTGCATTGGAGGGAAAATACCTTGAGTTTTAAAAGGTGAATTCTATAAAACAAATAAGGATATTACAAACATGCCCTTAGGTTCTTTTTGCCCCTCTTATTAATAGATAGGGAGATTAACATTTTGTGCTTATGAGTATAGGATCCTGCTATTCCACTCCTCTGCGTGATAACCACACGTGTGTTGAGAACTCAATGAAAAGTTTTTGCCCCATCTGTTGTGAGGTTTGCAATTAGAATACATCTTTTCTCAGGGAGTTATAATCTAAACTCTTCTCTTCTAACAATTTTACTGATGCTTGCAGTTTCTTTTTGACTCAATAAAAGACACAACTGTTATGCCTTGTGGTCACACAATACATTTGGAGTGCTTCAGCGAGATGCAATCAAAGAATCAGTAATCCAAACACTTACTTCAAAATCCAGTTTCTGAATCTACTATTAAATATATTTCTATGAACTTTGATTCCACGTAATACAACTCTATTTTCTATTATATCCATTGCATTTTATTGTCAAACCAAACTGGTTCTAAATTTCCTGTTTTGAATCACATCAACGTTTCCAGATTCTCTTATTCTAATGTAATAGTATCTGTCTCTCAGATACCGTTGTCCTATCTGCTTGAAAACAGTTGTGAACATGTCTGCAAGCTGGGCATTGCTGAAAATGGAGGTGTGTATCATCTCAGTTTAGGCATGATAAGAATGGTTTGTAGAAGGCAATTAGACAAATTTCATTTTAATTCTTCGAGAGGTTTCCCTAATTAGTGAACATGGTAGAACAGGTGGCTTCGTGTAAATTTTAGTTACCTAAGAAATTAGAATCTATATTTTATCATTGTGCATTGCACCCAGTCTTCAACCTCCTGACTGATCTTTTGTTTCTTTCTCTGTGATGATGTATGATTACATGTATTGGGCTGATTCGTAGAAAATTGGTGGTTGCAGAATTATTATCTTAATAGAATTCCTAGTGGAGTGATTGCATGAAGAGACAGAGTTAAGAAATGAGTGTAGATTCAAGGCTATAGTTATGCATTAAAGTTGAGTAGAGAGGAATAGGGAGGGCATTAACTTGTATAATAGAGATGAAAGAAGAAGATAGCAGTCCATGAGAGTTATATATGTTCTGTTGCAGACGAATACTCTATATACGACCTTATCCACTTCAATAAAACTTTAATTTTTTTTTTCTCATTTCCTATTTAGCCATTACCTTTTATCCAGCTAATATTTGATGGTAATATCGATCTTATTGGATAATTGACCTTTTGAATTACCAAGTGGTAGTCATATTTGTGAATTCTGACATATTTCTTGTGCCATATTCTGATGCTGAAATTCCCAAGTTTCTTTGGTTCTTAATCATGCTTTCTTTAGCATAGATCTTTTGTGTTACTGTCTTAAATTTGAAAACTGTGTCTTTCTTATGTAGATCGAGTGCACACCGATGCCTGAGGAGTACAACCACGAGGTAGTTCCTTGTATACATGTTTAGATTACCACAAGCTAATTTGCTGTCTTCCAACACACTGCAATGTTTGAAGTCTTCTAACATAACCGTCTACCGTGTTAAACAGGTATCAATTCACTGCAATGACTGCAACCATATGAGCAAAGTTCGTTTTCACATTTTGGGACACAAGTGTAGTCAGTGCAATTCATTCAATACTTGGAGGACTTCTTCTGGAGGACGTCAATGAAAACTAAAGGTACCCTAGAAATATGGGGCTCTCTTAATCTAACAATTAGAATTTGTTGAACGTCTGATTATTAGAGTCATTTGATTCATTCAGGAAGTCACCCTGTTTTGTTCAGAGGCTGACTCTGATTGGTTATACCTATGAATTCAGACACATCAAGTTAAGTACTGCGATCTTCTATAGG ATGCTCGCCGAAGAACTCGAGCAGGGGAGACGGTGTCCAATGGAACAAGAAGACTTACCTGTGCCCCAATCTGCCGTTACAGAGGATTTCGGAAAATTGCAATACGGATGCGAGCATTACAGGAGGCGATGCAAAATCCGAGCTCCATGCTGCGACCGAATCTTTACCTGTCGCCACTGCCACAACGAGGCCATGACCTCGCTGAGCAAGCCGGAGGACCGCCATGAACTTGTTCGCCAGGACATTAGACAAGTGGTTTGCTTGATTTGCAACACAGAGCAAGAGGTTGCCAAGGTTTGTCGCAAATGTAATGTTAATATGGGAGAATACTTTTGCGACATCTGCAAATTCTATGATGATGATACCAAGAAGAAGCAGTTTCATTGTGATGCATGTGGTATCTGTAGGGTTGGTGGTCGTGAAAATTTCTTTCACTGTGAAAGATGTGGATCCTGCTATTCCACTCCTCTGCGTGATAACCACACGTGTGTTGAGAACTCAATGAAAAGTTTTTGCCCCATCTGTTGTGAGTTTCTTTTTGACTCAATAAAAGACACAACTGTTATGCCTTGTGGTCACACAATACATTTGGAGTGCTTCAGCGAGATGCAATCAAAGAATCAATACCGTTGTCCTATCTGCTTGAAAACAGTTGTGAACATGTCTGCAAGCTGGGCATTGCTGAAAATGGAGATCGAGTGCACACCGATGCCTGAGGAGTACAACCACGAGGTATCAATTCACTGCAATGACTGCAACCATATGAGCAAAGTTCGTTTTCACATTTTGGGACACAAGTGTAGTCAGTGCAATTCATTCAATACTTGGAGGACTTCTTCTGGAGGACAGTCATTTGATTCATTCAGGAAGTCACCCTGTTTTGTTCAGAGGCTGACTCTGATTGGTTATACCTATGAATTCAGACACATCAAGTTAAGTACTGCGATCTTCTATAGG ATGCTCGCCGAAGAACTCGAGCAGGGGAGACGGTGTCCAATGGAACAAGAAGACTTACCTGTGCCCCAATCTGCCGTTACAGAGGATTTCGGAAAATTGCAATACGGATGCGAGCATTACAGGAGGCGATGCAAAATCCGAGCTCCATGCTGCGACCGAATCTTTACCTGTCGCCACTGCCACAACGAGGCCATGACCTCGCTGAGCAAGCCGGAGGACCGCCATGAACTTGTTCGCCAGGACATTAGACAAGTGGTTTGCTTGATTTGCAACACAGAGCAAGAGGTTGCCAAGGTTTGTCGCAAATGTAATGTTAATATGGGAGAATACTTTTGCGACATCTGCAAATTCTATGATGATGATACCAAGAAGAAGCAGTTTCATTGTGATGCATGTGGTATCTGTAGGGTTGGTGGTCGTGAAAATTTCTTTCACTGTGAAAGATGTGGATCCTGCTATTCCACTCCTCTGCGTGATAACCACACGTGTGTTGAGAACTCAATGAAAAGTTTTTGCCCCATCTGTTGTGAGTTTCTTTTTGACTCAATAAAAGACACAACTGTTATGCCTTGTGGTCACACAATACATTTGGAGTGCTTCAGCGAGATGCAATCAAAGAATCAATACCGTTGTCCTATCTGCTTGAAAACAGTTGTGAACATGTCTGCAAGCTGGGCATTGCTGAAAATGGAGATCGAGTGCACACCGATGCCTGAGGAGTACAACCACGAGGTATCAATTCACTGCAATGACTGCAACCATATGAGCAAAGTTCGTTTTCACATTTTGGGACACAAGTGTAGTCAGTGCAATTCATTCAATACTTGGAGGACTTCTTCTGGAGGACAGTCATTTGATTCATTCAGGAAGTCACCCTGTTTTGTTCAGAGGCTGACTCTGATTGGTTATACCTATGAATTCAGACACATCAAGTTAAGTACTGCGATCTTCTATAGG MLAEELEQGRRCPMEQEDLPVPQSAVTEDFGKLQYGCEHYRRRCKIRAPCCDRIFTCRHCHNEAMTSLSKPEDRHELVRQDIRQVVCLICNTEQEVAKVCRKCNVNMGEYFCDICKFYDDDTKKKQFHCDACGICRVGGRENFFHCERCGSCYSTPLRDNHTCVENSMKSFCPICCEFLFDSIKDTTVMPCGHTIHLECFSEMQSKNQYRCPICLKTVVNMSASWALLKMEIECTPMPEEYNHEVSIHCNDCNHMSKVRFHILGHKCSQCNSFNTWRTSSGGQSFDSFRKSPCFVQRLTLIGYTYEFRHIKLSTAIFYR Homology
BLAST of CcUC09G169090 vs. NCBI nr
Match: XP_038876712.1 (E3 ubiquitin-protein ligase MIEL1-like [Benincasa hispida]) HSP 1 Score: 571.6 bits (1472), Expect = 4.2e-159 Identity = 257/269 (95.54%), Postives = 264/269 (98.14%), Query Frame = 0
BLAST of CcUC09G169090 vs. NCBI nr
Match: TYK18253.1 (E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]) HSP 1 Score: 558.1 bits (1437), Expect = 4.8e-155 Identity = 246/268 (91.79%), Postives = 262/268 (97.76%), Query Frame = 0
BLAST of CcUC09G169090 vs. NCBI nr
Match: XP_004136056.1 (E3 ubiquitin-protein ligase MIEL1 [Cucumis sativus] >XP_031744839.1 E3 ubiquitin-protein ligase MIEL1 [Cucumis sativus] >KGN44881.1 hypothetical protein Csa_015948 [Cucumis sativus]) HSP 1 Score: 557.0 bits (1434), Expect = 1.1e-154 Identity = 246/270 (91.11%), Postives = 261/270 (96.67%), Query Frame = 0
BLAST of CcUC09G169090 vs. NCBI nr
Match: KAA0057531.1 (E3 ubiquitin-protein ligase MIEL1-like [Cucumis melo var. makuwa]) HSP 1 Score: 553.5 bits (1425), Expect = 1.2e-153 Identity = 246/269 (91.45%), Postives = 262/269 (97.40%), Query Frame = 0
BLAST of CcUC09G169090 vs. NCBI nr
Match: XP_022953225.1 (E3 ubiquitin-protein ligase MIEL1-like [Cucurbita moschata] >KAG6575860.1 E3 ubiquitin-protein ligase MIEL1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 531.9 bits (1369), Expect = 3.7e-147 Identity = 238/268 (88.81%), Postives = 252/268 (94.03%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy Swiss-Prot
Match: Q8VZK0 (E3 ubiquitin-protein ligase MIEL1 OS=Arabidopsis thaliana OX=3702 GN=MIEL1 PE=1 SV=1) HSP 1 Score: 369.8 bits (948), Expect = 3.2e-101 Identity = 153/247 (61.94%), Postives = 199/247 (80.57%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy Swiss-Prot
Match: Q9FFB6 (E3 ubiquitin-protein ligase RZFP34 OS=Arabidopsis thaliana OX=3702 GN=RZPF34 PE=1 SV=1) HSP 1 Score: 328.9 bits (842), Expect = 6.2e-89 Identity = 143/258 (55.43%), Postives = 176/258 (68.22%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy Swiss-Prot
Match: Q5JL96 (Probable E3 ubiquitin-protein ligase RZFP34 OS=Oryza sativa subsp. japonica OX=39947 GN=RZFP34 PE=2 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 4.1e-85 Identity = 133/246 (54.07%), Postives = 176/246 (71.54%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy Swiss-Prot
Match: Q10LI1 (E3 ubiquitin-protein ligase SRFP1 OS=Oryza sativa subsp. japonica OX=39947 GN=SRFP1 PE=1 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 3.5e-84 Identity = 133/251 (52.99%), Postives = 176/251 (70.12%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy Swiss-Prot
Match: Q9CR50 (RING finger and CHY zinc finger domain-containing protein 1 OS=Mus musculus OX=10090 GN=Rchy1 PE=1 SV=1) HSP 1 Score: 248.1 bits (632), Expect = 1.4e-64 Identity = 112/249 (44.98%), Postives = 155/249 (62.25%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy TrEMBL
Match: A0A5D3D3Y9 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001940 PE=4 SV=1) HSP 1 Score: 558.1 bits (1437), Expect = 2.3e-155 Identity = 246/268 (91.79%), Postives = 262/268 (97.76%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy TrEMBL
Match: A0A0A0KAQ1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G394010 PE=4 SV=1) HSP 1 Score: 557.0 bits (1434), Expect = 5.1e-155 Identity = 246/270 (91.11%), Postives = 261/270 (96.67%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy TrEMBL
Match: A0A5A7UVJ3 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold497G00010 PE=4 SV=1) HSP 1 Score: 553.5 bits (1425), Expect = 5.7e-154 Identity = 246/269 (91.45%), Postives = 262/269 (97.40%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy TrEMBL
Match: A0A6J1GP21 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucurbita moschata OX=3662 GN=LOC111455836 PE=4 SV=1) HSP 1 Score: 531.9 bits (1369), Expect = 1.8e-147 Identity = 238/268 (88.81%), Postives = 252/268 (94.03%), Query Frame = 0
BLAST of CcUC09G169090 vs. ExPASy TrEMBL
Match: A0A6J1JVS4 (E3 ubiquitin-protein ligase MIEL1-like OS=Cucurbita maxima OX=3661 GN=LOC111488790 PE=4 SV=1) HSP 1 Score: 530.4 bits (1365), Expect = 5.2e-147 Identity = 236/268 (88.06%), Postives = 252/268 (94.03%), Query Frame = 0
BLAST of CcUC09G169090 vs. TAIR 10
Match: AT3G62970.1 (zinc finger (C3HC4-type RING finger) family protein ) HSP 1 Score: 399.4 bits (1025), Expect = 2.6e-111 Identity = 169/253 (66.80%), Postives = 204/253 (80.63%), Query Frame = 0
BLAST of CcUC09G169090 vs. TAIR 10
Match: AT5G18650.1 (CHY-type/CTCHY-type/RING-type Zinc finger protein ) HSP 1 Score: 369.8 bits (948), Expect = 2.2e-102 Identity = 153/247 (61.94%), Postives = 199/247 (80.57%), Query Frame = 0
BLAST of CcUC09G169090 vs. TAIR 10
Match: AT5G25560.1 (CHY-type/CTCHY-type/RING-type Zinc finger protein ) HSP 1 Score: 331.6 bits (849), Expect = 6.8e-91 Identity = 141/252 (55.95%), Postives = 178/252 (70.63%), Query Frame = 0
BLAST of CcUC09G169090 vs. TAIR 10
Match: AT5G22920.1 (CHY-type/CTCHY-type/RING-type Zinc finger protein ) HSP 1 Score: 328.9 bits (842), Expect = 4.4e-90 Identity = 143/258 (55.43%), Postives = 176/258 (68.22%), Query Frame = 0
BLAST of CcUC09G169090 vs. TAIR 10
Match: AT5G25560.3 (CHY-type/CTCHY-type/RING-type Zinc finger protein ) HSP 1 Score: 323.6 bits (828), Expect = 1.8e-88 Identity = 141/262 (53.82%), Postives = 178/262 (67.94%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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