CcUC09G168710 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G168710
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Translocator protein-like protein
Location	CicolChr09: 5019665 .. 5020237 (-)
RNA-Seq Expression	CcUC09G168710
Synteny	CcUC09G168710

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTTCCACCGAGCTTAAGCACCGAAAGACAGACGATTCCGCCTCCCCCACCGTCCCCGCCGCCGACAACGGCACCGCCAAGAAAGCCAAGAACAAAGCCATAGCCAAACGAGGCCTAAAGTCTCTAGCTCTTGCAATCTCCATCCCCGTTTCCCTCACTCTCCTCTCCATCTTCCTCCTGTCCAACCCCAAAAACTACTTCTCGGCCTCCGCCGCAAGGCCCTTCTGGGTCCCATCGACGAAGGTCGTTAATTGGGGATCTTTGACTTCCAGCTTATTGATGGGCGTCGCGGCCTGGCTGGTTTGGGCCGAGGGCGGGTTCCACGCCAGGCCCAACGCCCTCTACCTTTATAGTTTGTACTTGGCGTTGTGCGTGGCGTGGTACGGCCTCGTGCTTGGGGCTGGCGCACGATGGCTCGGCTCTTTGGCATGTTTGGGAAAAACGGCGGCGTTGGTTGGGTGCGACCGGTTGTTCCGAGGTGTGAACCCGATTGCGGCGGACTTGCTTAAGCCTTGTTTGGTTTGGTCTGTTTTTCTTACTGTTGTGAATCTTACTATGGCTTCTCTTTGA

mRNA sequence

ATGGCTTCCACCGAGCTTAAGCACCGAAAGACAGACGATTCCGCCTCCCCCACCGTCCCCGCCGCCGACAACGGCACCGCCAAGAAAGCCAAGAACAAAGCCATAGCCAAACGAGGCCTAAAGTCTCTAGCTCTTGCAATCTCCATCCCCGTTTCCCTCACTCTCCTCTCCATCTTCCTCCTGTCCAACCCCAAAAACTACTTCTCGGCCTCCGCCGCAAGGCCCTTCTGGGTCCCATCGACGAAGGTCGTTAATTGGGGATCTTTGACTTCCAGCTTATTGATGGGCGTCGCGGCCTGGCTGGTTTGGGCCGAGGGCGGGTTCCACGCCAGGCCCAACGCCCTCTACCTTTATAGTTTGTACTTGGCGTTGTGCGTGGCGTGGTACGGCCTCGTGCTTGGGGCTGGCGCACGATGGCTCGGCTCTTTGGCATGTTTGGGAAAAACGGCGGCGTTGGTTGGGTGCGACCGGTTGTTCCGAGGTGTGAACCCGATTGCGGCGGACTTGCTTAAGCCTTGTTTGGTTTGGTCTGTTTTTCTTACTGTTGTGAATCTTACTATGGCTTCTCTTTGA

Coding sequence (CDS)

ATGGCTTCCACCGAGCTTAAGCACCGAAAGACAGACGATTCCGCCTCCCCCACCGTCCCCGCCGCCGACAACGGCACCGCCAAGAAAGCCAAGAACAAAGCCATAGCCAAACGAGGCCTAAAGTCTCTAGCTCTTGCAATCTCCATCCCCGTTTCCCTCACTCTCCTCTCCATCTTCCTCCTGTCCAACCCCAAAAACTACTTCTCGGCCTCCGCCGCAAGGCCCTTCTGGGTCCCATCGACGAAGGTCGTTAATTGGGGATCTTTGACTTCCAGCTTATTGATGGGCGTCGCGGCCTGGCTGGTTTGGGCCGAGGGCGGGTTCCACGCCAGGCCCAACGCCCTCTACCTTTATAGTTTGTACTTGGCGTTGTGCGTGGCGTGGTACGGCCTCGTGCTTGGGGCTGGCGCACGATGGCTCGGCTCTTTGGCATGTTTGGGAAAAACGGCGGCGTTGGTTGGGTGCGACCGGTTGTTCCGAGGTGTGAACCCGATTGCGGCGGACTTGCTTAAGCCTTGTTTGGTTTGGTCTGTTTTTCTTACTGTTGTGAATCTTACTATGGCTTCTCTTTGA

Protein sequence

MASTELKHRKTDDSASPTVPAADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFLLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYSLYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWSVFLTVVNLTMASL

Homology

[Close]

BLAST of CcUC09G168710 vs. NCBI nr
Match: XP_038897197.1 (translocator protein homolog [Benincasa hispida])

HSP 1 Score: 342.0 bits (876), Expect = 3.2e-90
Identity = 174/190 (91.58%), Postives = 182/190 (95.79%), Query Frame = 0


Query: 1   MASTELKHRKTDDSASPTVPAADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFL 60
           MASTELKHRKTDDS+SPTVPAADNG AKKAKNKAI KRGLKSLALAI+IP+SLTLLS+FL
Sbjct: 1   MASTELKHRKTDDSSSPTVPAADNGGAKKAKNKAITKRGLKSLALAITIPMSLTLLSVFL 60

Query: 61  LSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYSL 120
           LSNPKNY+ ASAARPFW+PS KVVNWGSLTSSLLMGVAAWLVWAEGGFHA+PNALYLYSL
Sbjct: 61  LSNPKNYYPASAARPFWIPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHAKPNALYLYSL 120

Query: 121 YLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWSVFL 180
           YLALCVAWY LV GAGAR LGSLACLGKTAALVGCDRLFRGVNPIAADL+KPCLVWSVFL
Sbjct: 121 YLALCVAWYALVFGAGARRLGSLACLGKTAALVGCDRLFRGVNPIAADLVKPCLVWSVFL 180

Query: 181 TVVNLTMASL 191
           TVVNLTM SL
Sbjct: 181 TVVNLTMVSL 190

[Close]

BLAST of CcUC09G168710 vs. NCBI nr
Match: KAA0068008.1 (translocator protein-like protein [Cucumis melo var. makuwa] >TYK18119.1 translocator protein-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 301.6 bits (771), Expect = 4.8e-78
Identity = 160/191 (83.77%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 1   MASTELKHRKTDDSA-SPTVPAADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIF 60
           MAST+LKHRKTDDS  + TV A  N   KKA+NK IAKRGL+SLALAISIPVSLTLL IF
Sbjct: 1   MASTDLKHRKTDDSTPTSTVTADVNDGTKKARNKVIAKRGLRSLALAISIPVSLTLLFIF 60

Query: 61  LLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYS 120
           L SN KNY+ ASA RPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFH+RPNALYLY 
Sbjct: 61  LFSNSKNYYPASAGRPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHSRPNALYLYG 120

Query: 121 LYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWSVF 180
           LYL L +AWY LV GAGAR L SLACLGKTAALVGCDRLFRGVNPIAADL+KPCLVWSV 
Sbjct: 121 LYLVLSLAWYALVFGAGARRLSSLACLGKTAALVGCDRLFRGVNPIAADLVKPCLVWSVL 180

Query: 181 LTVVNLTMASL 191
           LTVVNLTMASL
Sbjct: 181 LTVVNLTMASL 191

[Close]

BLAST of CcUC09G168710 vs. NCBI nr
Match: XP_023548365.1 (translocator protein homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 290.8 bits (743), Expect = 8.5e-75
Identity = 145/190 (76.32%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MASTELKHRKTDDSASPTVPAADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIFL 60
           MASTELKHR T D  SP  PAAD  +AK+AKNKAIAKRGLKSLA+A+SIP+++TLLSI L
Sbjct: 1   MASTELKHRTTGD--SPAAPAADEASAKRAKNKAIAKRGLKSLAVAVSIPIAVTLLSILL 60

Query: 61  LSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYSL 120
           LS PKNY+  SA +PFWVPS +VVNWGSL SSLLMG+++WL WAEGGF A+PNA+YLY+L
Sbjct: 61  LSRPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQAKPNAVYLYTL 120

Query: 121 YLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWSVFL 180
           YL LC+AWYGLVLGAG+RWLGS+ACLGKTA LVGCDRLFRGVN IAADL++PCLVWSVFL
Sbjct: 121 YLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNGIAADLVRPCLVWSVFL 180

Query: 181 TVVNLTMASL 191
           T+V+LTM S+
Sbjct: 181 TIVSLTMVSV 187

[Close]

BLAST of CcUC09G168710 vs. NCBI nr
Match: XP_022992488.1 (translocator protein homolog [Cucurbita maxima])

HSP 1 Score: 286.2 bits (731), Expect = 2.1e-73
Identity = 146/191 (76.44%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MASTELKHRKTDDSASPTVP-AADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIF 60
           MASTELKHR T D  SP VP AAD  + K+AKNKAIAKRGLKSLA+A+SIP+++TLLSI 
Sbjct: 1   MASTELKHRTTGD--SPAVPAAADEVSTKRAKNKAIAKRGLKSLAVAVSIPIAVTLLSIL 60

Query: 61  LLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYS 120
           LLS PKNY+  SA +PFWVPS +VVNWGSL SSLLMG+++WL WAEGGF A+PNALYLY+
Sbjct: 61  LLSKPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQAKPNALYLYT 120

Query: 121 LYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWSVF 180
           LYL LC+AWYGLVLGAG+RWLGS+ACLGKTA LVGCDRLFRGVN IAADL++PCLVWSVF
Sbjct: 121 LYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNGIAADLVRPCLVWSVF 180

Query: 181 LTVVNLTMASL 191
           LT+V+LTM S+
Sbjct: 181 LTIVSLTMVSV 188

[Close]

BLAST of CcUC09G168710 vs. NCBI nr
Match: KAG6575839.1 (Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 285.8 bits (730), Expect = 2.7e-73
Identity = 146/194 (75.26%), Postives = 170/194 (87.63%), Query Frame = 0


Query: 1   MASTELKHRKTDDSASPTVP----AADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLL 60
           MASTELKHR T D  SPTVP    AAD  +AK+ KNKAIAKRGLKSLA+A+SIP+++TLL
Sbjct: 1   MASTELKHRTTGD--SPTVPAAAAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLL 60

Query: 61  SIFLLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALY 120
           SI LL+ PKNY+  SA +PFWVPS +VVNWGSL SSLLMG+++WL WAEGGF ARPNALY
Sbjct: 61  SILLLARPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALY 120

Query: 121 LYSLYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVW 180
           LY+LYL LC+AWYGLVLGAG+RWLGS+ACLGKTA LVGCDRLFRGVN IAADL++PCLVW
Sbjct: 121 LYTLYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVW 180

Query: 181 SVFLTVVNLTMASL 191
           SVFLT+V+LTM ++
Sbjct: 181 SVFLTIVSLTMVAV 191

[Close]

BLAST of CcUC09G168710 vs. ExPASy Swiss-Prot
Match: O82245 (Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 9.2e-32
Identity = 76/195 (38.97%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 1   MASTELKHRKTDDSASPTV-------PAADNGTAKKAKNKAIAKRGLKSLALAISIPVSL 60
           M S ++++R  DD  + T         +AD+   K+ + +A+AKRGLKSL +A++ PV +
Sbjct: 1   MDSQDIRYRGGDDRDAATTAMAETERKSADDNKGKRDQKRAMAKRGLKSLTVAVAAPVLV 60

Query: 61  TLLSIFLLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPN 120
           TL + + L     Y    A    W+P   +++   L SS LMG+AAWLVW +GGFH +PN
Sbjct: 61  TLFATYFLGTSDGY-GNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKKPN 120

Query: 121 ALYLYSLYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPC 180
           ALYLY     LC+ W  +    G+   G    LG++AAL GC + F  ++P+A +L+KPC
Sbjct: 121 ALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVKPC 180

Query: 181 LVWSVFLTVVNLTMA 189
           L W+ F+  VN+ +A
Sbjct: 181 LAWAAFVAAVNVKLA 194

[Close]

BLAST of CcUC09G168710 vs. ExPASy TrEMBL
Match: A0A5A7VJL5 (Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G00470 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.3e-78
Identity = 160/191 (83.77%), Postives = 168/191 (87.96%), Query Frame = 0


Query: 1   MASTELKHRKTDDSA-SPTVPAADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIF 60
           MAST+LKHRKTDDS  + TV A  N   KKA+NK IAKRGL+SLALAISIPVSLTLL IF
Sbjct: 1   MASTDLKHRKTDDSTPTSTVTADVNDGTKKARNKVIAKRGLRSLALAISIPVSLTLLFIF 60

Query: 61  LLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYS 120
           L SN KNY+ ASA RPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFH+RPNALYLY 
Sbjct: 61  LFSNSKNYYPASAGRPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHSRPNALYLYG 120

Query: 121 LYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWSVF 180
           LYL L +AWY LV GAGAR L SLACLGKTAALVGCDRLFRGVNPIAADL+KPCLVWSV 
Sbjct: 121 LYLVLSLAWYALVFGAGARRLSSLACLGKTAALVGCDRLFRGVNPIAADLVKPCLVWSVL 180

Query: 181 LTVVNLTMASL 191
           LTVVNLTMASL
Sbjct: 181 LTVVNLTMASL 191

[Close]

BLAST of CcUC09G168710 vs. ExPASy TrEMBL
Match: A0A0A0KAU9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396370 PE=3 SV=1)

HSP 1 Score: 292.7 bits (748), Expect = 1.1e-75
Identity = 152/191 (79.58%), Postives = 164/191 (85.86%), Query Frame = 0


Query: 1   MASTELKHRKTDDSA-SPTVPAADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIF 60
           MAST+LKHRKTDDS  + TV A DN   KK+KNK IAKRGL+SLALAISIPVSLTL  I 
Sbjct: 1   MASTDLKHRKTDDSTPTSTVSADDNDGTKKSKNKVIAKRGLRSLALAISIPVSLTLFFIL 60

Query: 61  LLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYS 120
           L SN KNY+ ASA +PFWVPS KVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLY 
Sbjct: 61  LFSNSKNYYPASAPKPFWVPSAKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYG 120

Query: 121 LYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWSVF 180
           LY  LC+ WY L+ GAGAR L +LACLGKTAALVGCDRLFRGVNP+AADL+KPCLVWSV 
Sbjct: 121 LYSVLCLTWYALMFGAGARRLSALACLGKTAALVGCDRLFRGVNPLAADLVKPCLVWSVL 180

Query: 181 LTVVNLTMASL 191
           LTVVNLT+ SL
Sbjct: 181 LTVVNLTVVSL 191

[Close]

BLAST of CcUC09G168710 vs. ExPASy TrEMBL
Match: A0A6J1JZC9 (translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111488809 PE=3 SV=1)

HSP 1 Score: 286.2 bits (731), Expect = 1.0e-73
Identity = 146/191 (76.44%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MASTELKHRKTDDSASPTVP-AADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIF 60
           MASTELKHR T D  SP VP AAD  + K+AKNKAIAKRGLKSLA+A+SIP+++TLLSI 
Sbjct: 1   MASTELKHRTTGD--SPAVPAAADEVSTKRAKNKAIAKRGLKSLAVAVSIPIAVTLLSIL 60

Query: 61  LLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYS 120
           LLS PKNY+  SA +PFWVPS +VVNWGSL SSLLMG+++WL WAEGGF A+PNALYLY+
Sbjct: 61  LLSKPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQAKPNALYLYT 120

Query: 121 LYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWSVF 180
           LYL LC+AWYGLVLGAG+RWLGS+ACLGKTA LVGCDRLFRGVN IAADL++PCLVWSVF
Sbjct: 121 LYLVLCMAWYGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNGIAADLVRPCLVWSVF 180

Query: 181 LTVVNLTMASL 191
           LT+V+LTM S+
Sbjct: 181 LTIVSLTMVSV 188

[Close]

BLAST of CcUC09G168710 vs. ExPASy TrEMBL
Match: A0A6J1GQH6 (translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456181 PE=3 SV=1)

HSP 1 Score: 284.3 bits (726), Expect = 3.8e-73
Identity = 145/191 (75.92%), Postives = 169/191 (88.48%), Query Frame = 0


Query: 1   MASTELKHRKTDDSASPTVP-AADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLSIF 60
           MASTELKHR T D  SP VP AAD  +AK+ KNKAIAKRGLKSLA+A+SIP+++TLLSI 
Sbjct: 1   MASTELKHRTTGD--SPAVPAAADEVSAKREKNKAIAKRGLKSLAVAVSIPIAVTLLSIL 60

Query: 61  LLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYLYS 120
           LL+ PKNY+  SA +PFWVPS +VVNWGSL SSLLMG+++WL WAEGGF ARPNALYLY+
Sbjct: 61  LLARPKNYY-PSATKPFWVPSARVVNWGSLASSLLMGISSWLFWAEGGFQARPNALYLYT 120

Query: 121 LYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWSVF 180
           LYL LC+AW+GLVLGAG+RWLGS+ACLGKTA LVGCDRLFRGVN IAADL++PCLVWSVF
Sbjct: 121 LYLVLCMAWHGLVLGAGSRWLGSVACLGKTATLVGCDRLFRGVNAIAADLVRPCLVWSVF 180

Query: 181 LTVVNLTMASL 191
           LT+V+LTM S+
Sbjct: 181 LTIVSLTMVSV 188

[Close]

BLAST of CcUC09G168710 vs. ExPASy TrEMBL
Match: A0A6J1DBR2 (translocator protein homolog OS=Momordica charantia OX=3673 GN=LOC111019027 PE=3 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 2.7e-58
Identity = 125/192 (65.10%), Postives = 148/192 (77.08%), Query Frame = 0


Query: 1   MASTELKHRK---TDDSASPTVPAADNGTAKKAKNKAIAKRGLKSLALAISIPVSLTLLS 60
           MAS +LKHRK   +DDSA+ T PA         K  A A+RGLKSLA+A+S+PVSL+LL+
Sbjct: 1   MASPDLKHRKPTESDDSATATAPA--------RKPTATARRGLKSLAVAVSVPVSLSLLA 60

Query: 61  IFLLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPNALYL 120
           ++LLS+P   F  S+ +PFW PS   VN GS  SSLLMG A WLVWA+GGFH+ PNALYL
Sbjct: 61  VYLLSDPTK-FPPSSPKPFWFPSAAAVNLGSFASSLLMGAAVWLVWADGGFHSTPNALYL 120

Query: 121 YSLYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPCLVWS 180
           Y+LY+ LC  WYGL+LGAGA  L ++ACL KTAALVGCDRLFR VNPIAADL+KPCL WS
Sbjct: 121 YTLYVLLCFTWYGLLLGAGAPRLAAVACLAKTAALVGCDRLFRRVNPIAADLVKPCLAWS 180

Query: 181 VFLTVVNLTMAS 190
           VFLTVVNLTM +
Sbjct: 181 VFLTVVNLTMVA 183

[Close]

BLAST of CcUC09G168710 vs. TAIR 10
Match: AT2G47770.1 (TSPO(outer membrane tryptophan-rich sensory protein)-related )

HSP 1 Score: 138.3 bits (347), Expect = 6.5e-33
Identity = 76/195 (38.97%), Postives = 115/195 (58.97%), Query Frame = 0


Query: 1   MASTELKHRKTDDSASPTV-------PAADNGTAKKAKNKAIAKRGLKSLALAISIPVSL 60
           M S ++++R  DD  + T         +AD+   K+ + +A+AKRGLKSL +A++ PV +
Sbjct: 1   MDSQDIRYRGGDDRDAATTAMAETERKSADDNKGKRDQKRAMAKRGLKSLTVAVAAPVLV 60

Query: 61  TLLSIFLLSNPKNYFSASAARPFWVPSTKVVNWGSLTSSLLMGVAAWLVWAEGGFHARPN 120
           TL + + L     Y    A    W+P   +++   L SS LMG+AAWLVW +GGFH +PN
Sbjct: 61  TLFATYFLGTSDGY-GNRAKSSSWIPPLWLLHTTCLASSGLMGLAAWLVWVDGGFHKKPN 120

Query: 121 ALYLYSLYLALCVAWYGLVLGAGARWLGSLACLGKTAALVGCDRLFRGVNPIAADLLKPC 180
           ALYLY     LC+ W  +    G+   G    LG++AAL GC + F  ++P+A +L+KPC
Sbjct: 121 ALYLYLAQFLLCLVWDPVTFRVGSGVAGLAVWLGQSAALFGCYKAFNEISPVAGNLVKPC 180

Query: 181 LVWSVFLTVVNLTMA 189
           L W+ F+  VN+ +A
Sbjct: 181 LAWAAFVAAVNVKLA 194

The following BLAST results are available for this feature:

BLAST of CcUC09G168710 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897197.1	3.2e-90	91.58	translocator protein homolog [Benincasa hispida]	[more]
KAA0068008.1	4.8e-78	83.77	translocator protein-like protein [Cucumis melo var. makuwa] >TYK18119.1 translo...	[more]
XP_023548365.1	8.5e-75	76.32	translocator protein homolog [Cucurbita pepo subsp. pepo]	[more]
XP_022992488.1	2.1e-73	76.44	translocator protein homolog [Cucurbita maxima]	[more]
KAG6575839.1	2.7e-73	75.26	Translocator protein-like protein, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CcUC09G168710 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82245	9.2e-32	38.97	Translocator protein homolog OS=Arabidopsis thaliana OX=3702 GN=TSPO PE=1 SV=1	[more]

BLAST of CcUC09G168710 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VJL5	2.3e-78	83.77	Translocator protein-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E567...	[more]
A0A0A0KAU9	1.1e-75	79.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G396370 PE=3 SV=1	[more]
A0A6J1JZC9	1.0e-73	76.44	translocator protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111488809 PE=3 SV...	[more]
A0A6J1GQH6	3.8e-73	75.92	translocator protein homolog OS=Cucurbita moschata OX=3662 GN=LOC111456181 PE=3 ...	[more]
A0A6J1DBR2	2.7e-58	65.10	translocator protein homolog OS=Momordica charantia OX=3673 GN=LOC111019027 PE=3...	[more]

BLAST of CcUC09G168710 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47770.1	6.5e-33	38.97	TSPO(outer membrane tryptophan-rich sensory protein)-related	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR004307	TspO/MBR-related protein	PFAM	PF03073	TspO_MBR	coord: 46..188 e-value: 8.6E-17 score: 61.5
IPR004307	TspO/MBR-related protein	PIRSF	PIRSF005859	PBR	coord: 32..190 e-value: 2.3E-28 score: 96.7
IPR004307	TspO/MBR-related protein	PANTHER	PTHR10057	PERIPHERAL-TYPE BENZODIAZEPINE RECEPTOR	coord: 26..188
IPR004307	TspO/MBR-related protein	CDD	cd15904	TSPO_MBR	coord: 43..188 e-value: 2.60746E-16 score: 70.2184
IPR038330	TspO/MBR-related superfamily	GENE3D	1.20.1260.100	TspO/MBR protein	coord: 38..190 e-value: 1.7E-19 score: 71.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26
None	No IPR available	PANTHER	PTHR10057:SF6	TSPO/MBR FAMILY PROTEIN	coord: 26..188

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G168710.1	CcUC09G168710.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane