Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTTGTTTATTAGTGCAACGAAATAACTCTTGTACCAAAAGAGTTGTAAGTTTTTCCATTTATAATTTTCCACGAAACAAGCATATATATATATAAGCCTTCTGACCATCCAAACATTCCAAAACAAGCGCTTACACATTTGTTGAAACCAATTTGTGCCCCCACAATTTTAAGCCACTTAACCATAGAAATGACAAAGAGGTTTTAAGCTCTTTCAAACTCTTTTCCTAGTGTTTGCTTGGCATTGTTGTTCAAAGGTGAGTGCCATTTTCAATGATGCCACTGGTGTCGTAGATCTCGGTCTCAATCATCATTTTTCTTTTCGTGCGTTTGGATGGCCTCGTATCGAAACCTGGAATGTCGGTGGTAGCATCGCATCAACCGTAGACAACCAAATACGTGCAGAAGCACCAACAGGGATTGCCCCAGTTGGGCTTGAAACTCCAAACAACAAAGAGGATATAGTTTCGTATTTTGGTCATGAAATTATTAGGAAGATTAAAGGTGGTGCTGTTGTTTCAAATGATGATGAAATTAATTTGAAGAGTGGTAGCAACATTGCTTTTTCTCATGGTGGCAGAATTAGTCTAAAGAGAAAAGGTGGTAAATTTGGATTAAAGAGCAATGGGAATGTGATTAGCAACAATAACAAAGGTTTGTCTTTTGGTGTTGACATCAGAAAGAGAATTGTTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAAGGTTGACGTTGGTATTTCTGATGGTGGTAATATTAGTCTAAAGAAGAGATGTAGTATTGTTTCAAATGGTGATAGAATTGGTTTGCAAAGCAATGCCAATGCTTTTGTTTCTCATGGTCTTGGAGTTCATGGTACAATGTAA
mRNA sequence
ATGGTTGTGAGTGCCATTTTCAATGATGCCACTGGTGTCGTAGATCTCGGTCTCAATCATCATTTTTCTTTTCGTGCGTTTGGATGGCCTCGTATCGAAACCTGGAATGTCGGTGGTAGCATCGCATCAACCGTAGACAACCAAATACGTGCAGAAGCACCAACAGGGATTGCCCCAGTTGGGCTTGAAACTCCAAACAACAAAGAGGATATAGTTTCGTATTTTGGTCATGAAATTATTAGGAAGATTAAAGGTGGTGCTGTTGTTTCAAATGATGATGAAATTAATTTGAAGAGTGGTAGCAACATTGCTTTTTCTCATGGTGGCAGAATTAGTCTAAAGAGAAAAGGTGGTAAATTTGGATTAAAGAGCAATGGGAATGTGATTAGCAACAATAACAAAGGTTTGTCTTTTGGTGTTGACATCAGAAAGAGAATTGTTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAAGGTTGACGTTGGTATTTCTGATGGTGGTAATATTAGTCTAAAGAAGAGATGTAGTATTGTTTCAAATGGTGATAGAATTGGTTTGCAAAGCAATGCCAATGCTTTTGTTTCTCATGGTCTTGGAGTTCATGGTACAATGTAA
Coding sequence (CDS)
ATGGTTGTGAGTGCCATTTTCAATGATGCCACTGGTGTCGTAGATCTCGGTCTCAATCATCATTTTTCTTTTCGTGCGTTTGGATGGCCTCGTATCGAAACCTGGAATGTCGGTGGTAGCATCGCATCAACCGTAGACAACCAAATACGTGCAGAAGCACCAACAGGGATTGCCCCAGTTGGGCTTGAAACTCCAAACAACAAAGAGGATATAGTTTCGTATTTTGGTCATGAAATTATTAGGAAGATTAAAGGTGGTGCTGTTGTTTCAAATGATGATGAAATTAATTTGAAGAGTGGTAGCAACATTGCTTTTTCTCATGGTGGCAGAATTAGTCTAAAGAGAAAAGGTGGTAAATTTGGATTAAAGAGCAATGGGAATGTGATTAGCAACAATAACAAAGGTTTGTCTTTTGGTGTTGACATCAGAAAGAGAATTGTTGCATCTCTTGGTCTCAAAGCTCCCAAGAGAAAGGTTGACGTTGGTATTTCTGATGGTGGTAATATTAGTCTAAAGAAGAGATGTAGTATTGTTTCAAATGGTGATAGAATTGGTTTGCAAAGCAATGCCAATGCTTTTGTTTCTCATGGTCTTGGAGTTCATGGTACAATGTAA
Protein sequence
MVVSAIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGLETPNNKEDIVSYFGHEIIRKIKGGAVVSNDDEINLKSGSNIAFSHGGRISLKRKGGKFGLKSNGNVISNNNKGLSFGVDIRKRIVASLGLKAPKRKVDVGISDGGNISLKKRCSIVSNGDRIGLQSNANAFVSHGLGVHGTM
Homology
BLAST of CcUC09G168500 vs. NCBI nr
Match:
KAE8646351.1 (hypothetical protein Csa_023818, partial [Cucumis sativus])
HSP 1 Score: 265.4 bits (677), Expect = 4.1e-67
Identity = 145/217 (66.82%), Postives = 165/217 (76.04%), Query Frame = 0
Query: 5 AIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGLET 64
A FND TGVV+L LNHHFSFR FGWPRI T N GS+ASTV+N AEAPTGIAPVGL+T
Sbjct: 1 ATFNDVTGVVNLDLNHHFSFRGFGWPRIGTPNTDGSLASTVNN--HAEAPTGIAPVGLDT 60
Query: 65 PNNKEDIVSYFGHEIIRKIKGGAVVSNDDEINLKSGSNIAFSHGGRISLKRK-------- 124
P NK D VS FG EII++I+ G VVS D EINLKSG NIA SHGG+ISLK K
Sbjct: 61 PINKGDKVSTFGLEIIKQIESGVVVSKDHEINLKSGGNIALSHGGKISLKGKGGVSVSIN 120
Query: 125 GGKFGLKSNGNVI---------SNNNKGLSFGVDIRKRIVASLGLKAPKRKVDVGISDGG 184
GGKFGLKS+GNV+ S NNKGLSFGV+I+K VASLGLKAPK K++ G+S GG
Sbjct: 121 GGKFGLKSSGNVLVSHGFETSMSKNNKGLSFGVEIKKDHVASLGLKAPKGKLNFGVSHGG 180
Query: 185 NISLKKRCSIVSNGDRIGLQSNANAFVSHGLGVHGTM 205
NIS+KKR SIVS G +IGL+S+A FVSHGLG+HG M
Sbjct: 181 NISIKKRGSIVSKGGKIGLKSHAKVFVSHGLGIHGKM 215
BLAST of CcUC09G168500 vs. NCBI nr
Match:
KAA0048674.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18172.1 Ankyrin repeat protein [Cucumis melo var. makuwa])
HSP 1 Score: 206.5 bits (524), Expect = 2.3e-49
Identity = 110/179 (61.45%), Postives = 130/179 (72.63%), Query Frame = 0
Query: 3 VSAIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGL 62
V A F D TGVV+ GLNH FSFRAFGWP I T NV G+I STV QIRAEAP GIAPVGL
Sbjct: 26 VGATFTDTTGVVNAGLNHQFSFRAFGWPHIGTPNVDGTITSTVKKQIRAEAPAGIAPVGL 85
Query: 63 ETPNNKEDIVSYFGHEIIRKIKGGAVVSNDDEINLKSGSNIAFSHGGRISLKRKG---GK 122
+T NKE + +II++IKGG +SND E NL +G NIAFSHGG++S+K KG G
Sbjct: 86 QTLINKEKKAQSYDLDIIKQIKGGGAISNDHESNLNNGENIAFSHGGKVSVKSKGSVAGS 145
Query: 123 FGLKSNGNVISNNNKGLSFGVDIRKRIVASLGLKAPKRKVDVGISDGGNISLKKRCSIV 179
G K NG + + NNKGLSFGV I+K VASLGLK + KV+VG+S GGNIS+ KR S+V
Sbjct: 146 SGGKINGEMSNINNKGLSFGVKIKKDHVASLGLKGHRGKVNVGVSYGGNISINKRGSVV 204
BLAST of CcUC09G168500 vs. NCBI nr
Match:
KAA0048677.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18175.1 Ankyrin repeat protein [Cucumis melo var. makuwa])
HSP 1 Score: 193.7 bits (491), Expect = 1.5e-45
Identity = 113/192 (58.85%), Postives = 131/192 (68.23%), Query Frame = 0
Query: 3 VSAIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGL 62
V A F+D TGVV+ GLNH FSFRAFGWP I T NV GSI STV QIRAEAP GIAPVGL
Sbjct: 27 VGATFSDTTGVVNAGLNHQFSFRAFGWPHIGTPNVDGSIISTVKKQIRAEAPVGIAPVGL 86
Query: 63 ETPNNKEDIVSYFGHEIIRKIKGGAVVSNDDEINLKSGSNIAFSHGGRISLKRK---GGK 122
ETP NK+D V +II++IKGG VSND E L SG NIAFS+ G++S+K K G
Sbjct: 87 ETPINKKDKVQSDNFDIIKQIKGGGAVSNDHESKLNSGENIAFSYVGKVSVKSKNSVAGS 146
Query: 123 FGLKSNGNVISNNNKGLS--FGVDIRKRIVASL-----------GLKAPKRKVDVGISDG 179
G K NG + NNKGLS FGV+I+K VASL G+KA K KV+VG+S G
Sbjct: 147 SGGKINGVMSKINNKGLSLGFGVEIKKDHVASLGVKAHKGNASPGVKAHKGKVNVGVSHG 206
BLAST of CcUC09G168500 vs. NCBI nr
Match:
KAE8646352.1 (hypothetical protein Csa_015951, partial [Cucumis sativus])
HSP 1 Score: 179.9 bits (455), Expect = 2.3e-41
Identity = 103/163 (63.19%), Postives = 120/163 (73.62%), Query Frame = 0
Query: 3 VSAIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGL 62
V A F+DATGVV+ GLNH FSFRAFGWP I T NV GSI STV+ QIRAEAP GIAPVGL
Sbjct: 26 VGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPNVDGSITSTVEKQIRAEAPAGIAPVGL 85
Query: 63 ETPNNKEDIVSYFGHEIIRKIK-GGAVVSNDDEINLKSGSNIAFSHGGRISLKRKGGKFG 122
ET NKED V + +II++IK GGAVVS+D E NL SG NIAFSHGG++S+K KG G
Sbjct: 86 ETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHESNLNSGENIAFSHGGKVSVKSKGSVAG 145
Query: 123 LKSNGNVIS------NNNKGLSFGVDIRKRIVASLGLKAPKRK 159
S+G I+ +N KGLSFGV+I+K A+LGLKA K K
Sbjct: 146 --SSGGEINGLKRKIHNYKGLSFGVEIKKDHGANLGLKAHKGK 186
BLAST of CcUC09G168500 vs. NCBI nr
Match:
KAA0048678.1 (Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18176.1 Ankyrin repeat protein [Cucumis melo var. makuwa])
HSP 1 Score: 157.1 bits (396), Expect = 1.6e-34
Identity = 101/219 (46.12%), Postives = 129/219 (58.90%), Query Frame = 0
Query: 3 VSAIFNDATGVVDLGLNHHFSFR-AFGWPRIETW-NVGGS-IASTVDNQIRAEAPT-GIA 62
V A F+D TG++ LG++H +SFR G + + N GGS +S VD + +APT IA
Sbjct: 25 VGATFHDVTGILGLGISHRYSFRNTIGSSGVGMFSNTGGSTTSSVVDTESPTQAPTPDIA 84
Query: 63 PVGLETP---NNKEDIVSYFGHEIIRKIKGGAVVSNDDEINLKSGSNIAFSHGGRISLKR 122
P GLET N D +++ VS D +I+ KSG NIA S GG ++
Sbjct: 85 PAGLETNPAIKNSHDFMAF--------------VSKDHDIHWKSGRNIALSRGGIVT--- 144
Query: 123 KGGKFGLKSNGN----------VISNNNKGLSFGVDIRKRIVASLGLKAPKRKVDVGISD 182
GGK G+KSN + +S NNK LSFG++I K VASLGLKA RKV VG+S
Sbjct: 145 NGGKIGVKSNNSNFAVSHGLETSLSRNNKALSFGIEIEKNNVASLGLKAHTRKVHVGVSH 204
Query: 183 GGNISLKKRCSIVSNGDRIGLQSNANAFVSHGLGVHGTM 205
GGNIS+KKR SIVSNG+ G +S N SHGLG+ GTM
Sbjct: 205 GGNISIKKRGSIVSNGENFGFKSKTNVVASHGLGIQGTM 226
BLAST of CcUC09G168500 vs. ExPASy TrEMBL
Match:
A0A0A0K5J0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1)
HSP 1 Score: 266.9 bits (681), Expect = 6.8e-68
Identity = 146/219 (66.67%), Postives = 166/219 (75.80%), Query Frame = 0
Query: 3 VSAIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGL 62
V A FND TGVV+L LNHHFSFR FGWPRI T N GS+ASTV+N AEAPTGIAPVGL
Sbjct: 23 VDATFNDVTGVVNLDLNHHFSFRGFGWPRIGTPNTDGSLASTVNN--HAEAPTGIAPVGL 82
Query: 63 ETPNNKEDIVSYFGHEIIRKIKGGAVVSNDDEINLKSGSNIAFSHGGRISLKRK------ 122
+TP NK D VS FG EII++I+ G VVS D EINLKSG NIA SHGG+ISLK K
Sbjct: 83 DTPINKGDKVSTFGLEIIKQIESGVVVSKDHEINLKSGGNIALSHGGKISLKGKGGVSVS 142
Query: 123 --GGKFGLKSNGNVI---------SNNNKGLSFGVDIRKRIVASLGLKAPKRKVDVGISD 182
GGKFGLKS+GNV+ S NNKGLSFGV+I+K VASLGLKAPK K++ G+S
Sbjct: 143 INGGKFGLKSSGNVLVSHGFETSMSKNNKGLSFGVEIKKDHVASLGLKAPKGKLNFGVSH 202
Query: 183 GGNISLKKRCSIVSNGDRIGLQSNANAFVSHGLGVHGTM 205
GGNIS+KKR SIVS G +IGL+S+A FVSHGLG+HG M
Sbjct: 203 GGNISIKKRGSIVSKGGKIGLKSHAKVFVSHGLGIHGKM 239
BLAST of CcUC09G168500 vs. ExPASy TrEMBL
Match:
A0A5A7U057 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001040 PE=4 SV=1)
HSP 1 Score: 206.5 bits (524), Expect = 1.1e-49
Identity = 110/179 (61.45%), Postives = 130/179 (72.63%), Query Frame = 0
Query: 3 VSAIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGL 62
V A F D TGVV+ GLNH FSFRAFGWP I T NV G+I STV QIRAEAP GIAPVGL
Sbjct: 26 VGATFTDTTGVVNAGLNHQFSFRAFGWPHIGTPNVDGTITSTVKKQIRAEAPAGIAPVGL 85
Query: 63 ETPNNKEDIVSYFGHEIIRKIKGGAVVSNDDEINLKSGSNIAFSHGGRISLKRKG---GK 122
+T NKE + +II++IKGG +SND E NL +G NIAFSHGG++S+K KG G
Sbjct: 86 QTLINKEKKAQSYDLDIIKQIKGGGAISNDHESNLNNGENIAFSHGGKVSVKSKGSVAGS 145
Query: 123 FGLKSNGNVISNNNKGLSFGVDIRKRIVASLGLKAPKRKVDVGISDGGNISLKKRCSIV 179
G K NG + + NNKGLSFGV I+K VASLGLK + KV+VG+S GGNIS+ KR S+V
Sbjct: 146 SGGKINGEMSNINNKGLSFGVKIKKDHVASLGLKGHRGKVNVGVSYGGNISINKRGSVV 204
BLAST of CcUC09G168500 vs. ExPASy TrEMBL
Match:
A0A0A0KAZ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398760 PE=4 SV=1)
HSP 1 Score: 204.5 bits (519), Expect = 4.1e-49
Identity = 116/181 (64.09%), Postives = 136/181 (75.14%), Query Frame = 0
Query: 4 SAIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGLE 63
SA F+DATGVV+ GLNH FSFRAFGWP I T NV GSI STV+ QIRAEAP GIAPVGLE
Sbjct: 6 SATFSDATGVVNAGLNHQFSFRAFGWPHIGTPNVDGSITSTVEKQIRAEAPAGIAPVGLE 65
Query: 64 TPNNKEDIVSYFGHEIIRKIK-GGAVVSNDDEINLKSGSNIAFSHGGRISLKRKGGKFGL 123
T NKED V + +II++IK GGAVVS+D E NL SG NIAFSHGG++S+K KG G
Sbjct: 66 TMINKEDKVQSYDLDIIKQIKGGGAVVSHDHESNLNSGENIAFSHGGKVSVKSKGSVAG- 125
Query: 124 KSNGNVIS------NNNKGLSFGVDIRKRIVASLGLKAPKRKVDVGISDGGNISLKKRCS 178
S+G I+ +N KGLSFGV+I+K A+LGLKA K KV+VG+S GGNIS+ KR S
Sbjct: 126 -SSGGEINGLKRKIHNYKGLSFGVEIKKDHGANLGLKAHKGKVNVGVSHGGNISMNKRGS 184
BLAST of CcUC09G168500 vs. ExPASy TrEMBL
Match:
A0A0A0K7W7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1)
HSP 1 Score: 201.1 bits (510), Expect = 4.6e-48
Identity = 115/183 (62.84%), Postives = 135/183 (73.77%), Query Frame = 0
Query: 3 VSAIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGL 62
V A F+DATGVV+ GLNH FSFRAFGWP I T +V GSI STV QI AEAP GIAPVGL
Sbjct: 26 VGATFSDATGVVNAGLNHQFSFRAFGWPHIGTPDVDGSITSTVKKQIHAEAPAGIAPVGL 85
Query: 63 ETPNNKEDIVSYFGHEIIRKIK-GGAVVSNDDEINLKSGSNIAFSHGGRISLKRKGGKFG 122
ET NKED V + +II++IK GGAVVS+D E NL SG NIAFSHGG++S+K KG G
Sbjct: 86 ETMINKEDKVQSYDLDIIKQIKGGGAVVSHDHESNLNSGENIAFSHGGKVSVKSKGSVAG 145
Query: 123 LKSNGNVIS------NNNKGLSFGVDIRKRIVASLGLKAPKRKVDVGISDGGNISLKKRC 179
S+G I+ +N KGLSFGV+I+K A+LGLKA K KV+VG+S GGNIS+ KR
Sbjct: 146 --SSGGEINGLKRKIHNYKGLSFGVEIKKDHGATLGLKAHKGKVNVGVSHGGNISINKRG 205
BLAST of CcUC09G168500 vs. ExPASy TrEMBL
Match:
A0A5A7U318 (Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold411G001070 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 7.3e-46
Identity = 113/192 (58.85%), Postives = 131/192 (68.23%), Query Frame = 0
Query: 3 VSAIFNDATGVVDLGLNHHFSFRAFGWPRIETWNVGGSIASTVDNQIRAEAPTGIAPVGL 62
V A F+D TGVV+ GLNH FSFRAFGWP I T NV GSI STV QIRAEAP GIAPVGL
Sbjct: 27 VGATFSDTTGVVNAGLNHQFSFRAFGWPHIGTPNVDGSIISTVKKQIRAEAPVGIAPVGL 86
Query: 63 ETPNNKEDIVSYFGHEIIRKIKGGAVVSNDDEINLKSGSNIAFSHGGRISLKRK---GGK 122
ETP NK+D V +II++IKGG VSND E L SG NIAFS+ G++S+K K G
Sbjct: 87 ETPINKKDKVQSDNFDIIKQIKGGGAVSNDHESKLNSGENIAFSYVGKVSVKSKNSVAGS 146
Query: 123 FGLKSNGNVISNNNKGLS--FGVDIRKRIVASL-----------GLKAPKRKVDVGISDG 179
G K NG + NNKGLS FGV+I+K VASL G+KA K KV+VG+S G
Sbjct: 147 SGGKINGVMSKINNKGLSLGFGVEIKKDHVASLGVKAHKGNASPGVKAHKGKVNVGVSHG 206
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KAE8646351.1 | 4.1e-67 | 66.82 | hypothetical protein Csa_023818, partial [Cucumis sativus] | [more] |
KAA0048674.1 | 2.3e-49 | 61.45 | Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18172.1 Ankyrin repeat pro... | [more] |
KAA0048677.1 | 1.5e-45 | 58.85 | Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18175.1 Ankyrin repeat pro... | [more] |
KAE8646352.1 | 2.3e-41 | 63.19 | hypothetical protein Csa_015951, partial [Cucumis sativus] | [more] |
KAA0048678.1 | 1.6e-34 | 46.12 | Ankyrin repeat protein [Cucumis melo var. makuwa] >TYK18176.1 Ankyrin repeat pro... | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0K5J0 | 6.8e-68 | 66.67 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398750 PE=4 SV=1 | [more] |
A0A5A7U057 | 1.1e-49 | 61.45 | Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4... | [more] |
A0A0A0KAZ8 | 4.1e-49 | 64.09 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G398760 PE=4 SV=1 | [more] |
A0A0A0K7W7 | 4.6e-48 | 62.84 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G399280 PE=4 SV=1 | [more] |
A0A5A7U318 | 7.3e-46 | 58.85 | Ankyrin repeat protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold4... | [more] |
Match Name | E-value | Identity | Description | |