CcUC09G167540 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G167540
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ADP-ribosylation factor
Location	CicolChr09: 4124039 .. 4132869 (+)
RNA-Seq Expression	CcUC09G167540
Synteny	CcUC09G167540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGAAATTCCAACGTGAACTACGAGGATTCCGATCGGCTCGTCATCGTCACTCTTCTTCCTCTCAGATTCTCAAATCCCAACTTCCATGGCGGCAATCACAACGAACCCTACCGCTCTTCTTGTTCTTCTTCCTCTTCATTCTCCTCTTCCACACTTCCATCACTTCGCTTCTTCTGCTTCTATCACTCCCAACTTCACCGCCCTCAGATTCTCTCAGTTCAACCTCGCCAACAGGCCTTCCAATCGCCAAATCCTCCCTCTGGTCAAGGCCGCCGCCCAAGGCTCTCTAGGTAAGTATCACTCGCTTCACATTGCATCGCTCTTCAGCTTCTCAATTTATAATATGCGGTTTTCTTGCTGTTTCTCTTTGTAGATTATGTTCCTGATTCCAAATTCTACAAAGTGGAGGCCATCCTCAGGTACGGACGTACTCCATATTTTCCTCTACTGTTACATTTGGAGTTCTTAAATGTTGATTCTGTTTTTTCTTTAGTTTGCATAGTGTGTATTGGTTCTTTTGAAGTCTTTTCAGTAACCTTGCTGAGTTTGTTGCATCTGATGCGTATTTATCTATGTGCTATGTTGGTGTGTTTGGACGAGATAGGCCATGGAGAATCCAAAATGTTTCTTCGGTAAGAGCTAGTTAACCTTCAACATGGTCATTCGTAATTTCCATCTGGAATATGCAAAATCTCGTTTGGTTTTATTGTCAAATATGGTAAAATTAGGATACCATGAGACTATGGGGGAAGAGTTATGAAAAGCTAAGAAGCACAGACACGAGTTTGGCTTGCGTGCCTTTGTGAACACTTGGACAATTTGACACTTGTTGGACACGTATTGGCCACTTGTTAGTGTATTAGATGTGTTAGACACTGGTTGTACAAAGTCAAAATAGAACCAAAACTTATTAGGCATGCATCATATACTAATTAGACCCATATATGACCAAAATAATAAAATTTGATAATGAAATACATCAAACTAATTTTAAACTTGTTGATTTTGGATTTCTTTCTAGTTTAAAAATGATATATATTTTTTAAAAAATGTATGTTTTAATAAACATGTCCTTTCTGTGCCCGTGTCCTAAATTTTCTAAAAAAGATGCGTCATCGTGTATGTGTCGTGTCTATTTGTATTAGTGCTTCTTTGACGAAAACTTTGAATTTTTGGTATCAGAGGAAGTGTAGTTTAGGATCATAATATTGAGGCCATTCAAGGTTGCGAAAAGTCCCAGTTGTTATCATACTTGCATTTCTAGATTGGTTGCACACTATCTTGTCAATGCCATAGAATAAAAATGGCTAATCTACTTTGTGAAGTCTATCCATGGTGCTCGTCCATAGCCAAAAAGAATCAAATAGAGATTGACCTTTAACCTATCGTGCCTGACAAAGACATATATGTTTTACGTGTTTGAATGGTAGAAAATGAATGGAGATTATGAAGATTTTTGTTGTTTTAATATCCTATTTTACAAAGCGTTGGTATTAAATTGTTCTGTTGTTTCTTGGGGAAAAAATGAAGGCATTGCTGAAAATGGGTATTCGAGGTGTAACGGTATCTGACGTGAAGGGCTTTGGTTCTCAAGGTGGATCTACAGAGAGGCATGGTGGTAAGTTTATCTTTCACAATTCTCTCCGTCTTAGTGCTTGGTGAGGGGAGTCTATTTGTACATGTTAGTCTGTTTCTAGACTCTCATGGTCCTTTTCCATTAGTCATTACTGATGTCTGCTTATGATTCCATATCACTTTATACTCTTTTATTTACTGCTCAGGGTCTGAATTTTCTGAAGACAACTTTGTCGCTAAAGTTAAGATGGAAATTGTGGTAGTTAAAGACCAGGTAAAATATTGTTCAGCCTCGTGAAAAGAAATTCAAATTTGTTGAACATATCCCTTAAGCAAACTGCTGCATCAGAATCCATGGGTATTTTGATTAAATTTAGGTATCCTTTTTATCAGGTTGAAGCTGTCATTGACAAGATAATTGAGGAGGCAAGAACTGGTGAAATTGGTGATGGCAAAATTTTTGGTAAAACGTAACTATATTTTTGTTAATAGCTCAGCTCCTTATTTGTTTATTTCGTAATTGTTTGCTTATTTCTACTCTGAATCTGCTGTCCTGTTTGTTATGCGGTTTATTACTGTTATATTTTCATTTCACTTTGTTTGATTTTCCTTTTTCATGCATTACCAATTTACCATTAACACTAGTTTTTTTTTTTTTTATTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTGGATAAGAGACTATTTCATTGAATATATGAAATATCAAGGTTGTACAGAAGGGCTCCTGTCAAAGGGAGTACAAAAGATGTTTCCAATTTGAAATGAGAAAAGAGTAACTATGGCAATTAATAGCCTGTATATCTTTACACCAAAAGAAAGCGTTGAATAAGGCAGATTCTAAAATGTCCTTTGAAGAATTGGTTTTGTCTTGGTTAACTGGATTAGCACCTTATATGGTAATTATTTTAGTAACGAATTAAAATAATTGGTAAGTATTTGTCATGCAATGTGAGATAAATTGTTTATTTTTATAAGTTTAGTGATGAAATCTCTTAGTTCTAGTTTAGTGATATAAGAGTTGAAAAGTCACTAGACTTTTTGCATTACCAGTTTAGAATGACTTTTTAAGTACGCTTAAAAACACTTTTTGGGAATGTATGGGTATAAATGGGCCATGTCAATAGATGTTTTGGTTAAGGAGCTGGCTTCGTCGTGAATGTTCTTCCGCCCGGAGATGTTGGTTTGGTTTCCATCATGTCAGAGTGTAATACTCCCAAGTATTTGAATCTCTAGATTCTTAAACTTAAAATTGTTACTTCAATGTACAGACATCACGTGAAATTATTGTCTGAAGGGTAGTTTTAAATTGCCACTCTTGTATAGCTGACTATTAGTTGCTTTTAATACAAAAGCACATGAACTTTACTAGAGTTCACTATTTAAGTTATGCCATATGCTTGAAATCTAAAGCACGTATTCAAATGCACACACATCGAAGAAATGCAAATCTCGGAATTCTATTTTCTTTATTTAGTTCTAACCTTTTATGCTTCTATCAAACTTCTAACACACTTTTCAATTTCACACAGTGATACCCATCTCAGACGTGATTAGAATTCGTACAGGTATCTTGTTAGCTTTAAGCAACTATCAAATTTTCAAGTTGCCTACTATATGAAAGTTAAAGCCATTAAGATTATTTCATTTCACATTGGAATATGACATGCCTTATATGATGCTTAATTTACAGGCGAACGTGGAGAAAGAGCAGAGAGGATGACCGGAGGGCGATACGACATGTCTGTTAATCAAGTAGGGCAGTAAGAAGGCGAAAATGTTTCGAGTTTGGAACTTTTGTTCCATGCTCTTGCCGCTACCTTCCTCAGTTTGGTCCTGTGGAGATGAGAAATAAAAGAAATTGTAAGTTGTAAGTTGTAAGTTGTAAGTTAGATAAGGTTCATTTTCTTGAAAACATCGGACTTGTAAATATGTAACTTCGTCATGCTGTCATAAATATGAACCACATTAGGCAATAATCAACGCGTAAGCTACTATACCTTTTCCTAATTTACCTCTGATTTGATGGTGAATCCAAAGAGATGTGTAGTTGTCTTGTTCTTTACCATATTTACATTGACTTTTGTTTAAAATTTTGCATATGCGGTTGTATTTGAGGTAAAATACAAGATTCTTTTTTTTTCTTCTTAGTTTAGTTCGATAATTGTGGTTGTGGGTAGAGATGTTCATTTAATTACCTCTTCGAGACCTGTCCCGAATGAGACAATGATCCCTACTTACGCAGGGAATGAGAATGGATGAGAGATGATTCTCTCCGTTGGCTAAATGGGACATGAATCCTTTTTTTGTCCCCACCTTTTTTTAATATATATTTGTTGGGATAATCACTATTTAATTTGGATCAATTATCTCCTCTTGTGTGGATCTAGTAGGATATTAATCAACTAGAAACAATAATAATTATCAAGCAATACACAAACGATTTTAACGTGCAAAACCACCTCGATGTGAGGAGTAAAAACTAGGGACTAAAGTCAAAAATTCTACTATAATCAATAATGGGTACAAACGAGTTCTCCCTAGTCACAACTAGAGGCATACACAATATATATATCTTAAGATTAAGAATCTCAACAATAAAGAAGAAAGTAGATTTGAAAAAATCTCACTTGATGTGACAAACAAATTTTCACAATATCTGATTGTAGGTAGTTTCAAATGAAATCTCCATCGTCCAGGTTGAAGACCCTCATGTCAAGAACACAGTATCAAAATTTCAGCCGGTCGAAATGTGTTTTCTTCACTTTTATTGCTGTCCATGCATACTCACTTAACATTTTATCTCTTTGTTTGCGTGCATACTCACTTAACCGGCGACCACAAGTTTTTTTTTCTTTTTTTTTTTTTTTAAAAAATAAACCTACTTTTGCCATGTAATGGGCCTTAATTGGCCTTTCACAAATATGAAATAAGCCCAACAATATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATTATGTAGGTATACATAGATTGTAATTTTGTTTTAAAATTGAAGATTTGTATTATTTAAATTGAAAAAGATGCATTGGAATATTGAAATTTAAACATTTGAAAATTGTAGTTAAACATTTTAATTATATTTTGGCATATGGAGTGTTATTAGAATATTCTAAAGAAAAAAAGAATTCAAATGAAAATTATTCTGAAAATTACTCACATAAACATATAGACTTGGAAAAGAATCATTGTATTTAGTTAAAACCATTTTTGTTTTCTGAAAGACGGGAATAATTTCTAAATGGAGAATTTAGAGGGAAAAAAATCAATTTTAACCCTAATTTTGTCTTGTTGTATCAAATTTGGACCTTAAATTTTCACTTTCATCAATATTAACCTTAAACTTAAACTTGTTCACTCTAATTACTTGTTCACTCTAATTACTGTTAAAAATGAATTTAATGAATTATAGAACATATATAGGATGCAAAATCAATAAATTTTTCTTTTTTTTTGTTGAATTTTTTTGTGACGAACGAGTTTATCAAAAAATTTATATCATTTATTTTTTCTTTTGCTAAAAATTAGTGGGAGAATTAGTTAGAATTGACCTTTATTTAAGTTCAGGGTTAATATTAATAAAATTGAAAGTTTAGAGTTCAAATTGATCTAACTAGAATTAAAATATTTTTTCAATAATTTATTTTCATAACAACCTAATAACATTAATATGTAATACCAAACAAAATGAATTTTATTGTCGGACAAAATGACGTTTCTGCTTTTGGGAATGGATGGATACTATCCCCATTCCGGATAAAGAAACCGACCCGAGAATCGAATTTCTTTTCTCCCAAACAGCACTTACAATTTAAGCAACGTCATAACGGCGTCACCGAACCAAACGGTAAAATATGAAGGAAAATAAAAACCGAGCAGTCAAACGTTACTTCACGTCATGAAAATATTCATTTTTTTTTTCAAAAAGAATTTAATTTATTTTGGTTTATAAAAATACAGTCCTCATAATTCGCGAATTCGCATTTGATCGTGAAGGACAGCTTCTCTCTTGTGTGCAAGAGCTATTTGGGGCCGATCTCTTCAATTCCGTAAGTTTTTCATTCAATCTCCTTTCTCATTTCTCTCCAAGATCTGTCCACAATCCTGCCGATTACCCTTAATTTTGATCCTTCCTGCTTCGATCTGTGCTCCTGCTGATTCCCTCTTTTCCCTGTTTTATCTTCTGTTCATCTTCGTATTGATTGTTCTTTCGTGAGTTTTGATTGATTTGTATTCTCTGATCTGGGTTTCTGTTTTCTCTGCCTTGATGTTTTGTGTTTGGATCTGATCTGACGACCCTTTTTTATTTGAATTCCGTTCGCCATGTTTATACCTGGATTTGTGTTGATGCATGTGTTTAACCGATTGGCTGGATGTGTTTCTTTTGTGCTGGATCTAGCGGTCTAATTGATTTGGTTGTGCTATAGCATCAGATACTTCTTTTTTTTTTTTTTTTTTTTTTTTTCGTTTTTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTATTCGTTTTTTATTTGAATTGTGGATGAAAATGGCATTCTGGTCTTTTTTGGATGATTTTGTGTCTAGGCTATATAATTTTGGAATTACAACACCGGATTCTCTCCTTTTTTGGGCTGATATAAGTATCTGATGTCGTTGTATTTTAAGGGGTAACTGATACCGGCTTGTTGTATTTGTATTCAGTTTACTTGAAAAATGGGGCTGTCTTTCACCAAGCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTTGACGCAGCTGGTAAGACCACGATCCTTTACAAGCTCAAGCTGGGAGAGATTGTCACCACCATTCCTACCATTGGTAAGTTGTTTTTATATCCAATTACTGATTTCATGGATTAATAAATGGCGGAATTGATGCGTTTTGTTTACAACAATTTGATGCTTTGTGTCTAGATCGCAGCCATTGAACATGTTTGTTTAACTTGGTAGTTCCCTATTTGTTGTCATCGTTGTCATCACAAAAAGTAAAAGTTACTAACTTACTATAATGAATTGTTGTGTTATCCATGAGGAGATGAATTTATAGAGGAATACTTGATGTTTAATCTAATGGCGTGCACGTGCATCCCTGATTTGTACGCTGCATCAATAGGGAAGGGGGAATGTTTCTTTTGTCATTTTGGGTTAATTAGAGGCTATGACTGTAAGTGAACCTTACAATCATAACTTTCTGTCATAGTTAGCCACAAAATTCCAGACATGATATTTTTGAAAAAGTGACTAAAGACTTTGACTTGATTGCTTATTGTTATTCTGATTTCTGTAGAAGAAACTTTTTGTGGTTACATTTTTAACTACACGGGATCTTAGTTAGTTATTATTGATGAAAAAGAAGAATGTGATATCAGAAACATAACTGACCTGTGTATGACTGCAGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACTGTCTGGGACGTTGGGGGTCAAGACAAGGTACACTGATTGGTCCTATTCTGTGATGTTGGCTTTCTACTTTCTCCATTCGATCATTTTAAGGTGCTAGATTTCTGACAGTATGTTTAAGTGATGATGTTGTTTCTGTTGTTGTATAGAGTTCCTTGGGTATGGTACATGCAAAACTTGATAGATGCTTGTTTTAAATCGATCAATGTTAAAATCTGGCTTCTCATTTTCCTTTTTCTTGTCTTACTTAGCTTTTTAGTCATAAGTATAGATTTTACTAGTGAATCCCTTTAAACTTTTCAACTTTCTTAGGAGTATTGGATTTAGAATTTTATATTTAACATTTTAAAATATTTTGACACTTGTGCTTCCACGGACTCATAGTTGGTAGCCAACATGGGTAATATTAATTGTCCTCTCCACTGATTTGATGTCTGTTTCGTTCCAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGTACTCATAATAAAAACTGATTTGTCAGATTTTGATAGCCTTTGCATAAACTACCGGCTACCCTGAACAATTGTTTCATTCTAGTTTGTTCTCTAGATGATAACATGTGTTGCTCTTACAGGACGAGCTGAGGGATGCAGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCAAATGCCATGAATGCTGCTGAGATCACCGACAAGCTTGGTCTTCACTCCCTCCGACAACGTCACTGGTACATTTGATGATCATCAAAACTCTTAACCCTTGCAATGGCTTAAAACTTTAAGTTAGTAATACGTACAATGTCTCGAAATCCCATTTCAGGTACATCCAGAGCACATGTGCCACATCTGGTGAAGGACTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGTAAAAAATAACAATGTTCTGTGTTTAATTCAATGCACATGTCATATCCATCTTTTCAGTGGGATGTCGAATCTTAATAATTTGGACTGTGTAATTTTATTTTGTCATTTTATCAATATCATTTGCCTTCATTTCTAAAATGCAAAATTTTACTGAAAAGGAACTTTATTCAAAAGAATAAGGAGAGGGATAAGGAAATGACTTGTTTCTTAATCAATTTAGTTGTACTTCGTTGGGTCGATAATAGGATTGTTTATTCCTGATTTGCAGGCGTAGATGGGGTTTCCTTTGAGCTGGGATTGGTTCTGGAAATTCATATTGATGTCATTGTCCATTGTTTACGGGCATTTTTGTTGGATTACCTGATCTATACGATGTTCCTAGTGGATGATTTCTAGGTTGGTGTTGGATTCTGAATAATGAAAGAAATTTTGAAGTATTTGTCATGTTATCGACTCAATAGCATTGTTTTTATGTAATGAATTAATGATGGTTCTTAAAATAGGTGTATTTGTATGAGAATCATGTTT

mRNA sequence

GGAAATTCCAACGTGAACTACGAGGATTCCGATCGGCTCGTCATCGTCACTCTTCTTCCTCTCAGATTCTCAAATCCCAACTTCCATGGCGGCAATCACAACGAACCCTACCGCTCTTCTTGTTCTTCTTCCTCTTCATTCTCCTCTTCCACACTTCCATCACTTCGCTTCTTCTGCTTCTATCACTCCCAACTTCACCGCCCTCAGATTCTCTCAGTTCAACCTCGCCAACAGGCCTTCCAATCGCCAAATCCTCCCTCTGGTCAAGGCCGCCGCCCAAGGCTCTCTAGGCCATGGAGAATCCAAAATGTTTCTTCGGCATTGCTGAAAATGGGTATTCGAGGTGTAACGGTATCTGACGTGAAGGGCTTTGGTTCTCAAGGTGGATCTACAGAGAGGCATGGTGGGTCTGAATTTTCTGAAGACAACTTTGTCGCTAAAGTTAAGATGGAAATTGTGGTAGTTAAAGACCAGGTTGAAGCTGTCATTGACAAGATAATTGAGGAGGCAAGAACTGGTGAAATTGGTGATGGCAAAATTTTTGGCGAACGTGGAGAAAGAGCAGAGAGGATGACCGGAGGGCGATACGACATGTCTGTTAATCAACACTTACAATTTAAGCAACGTCATAACGGCGTCACCGAACCAAACGTCCTCATAATTCGCGAATTCGCATTTGATCGTGAAGGACAGCTTCTCTCTTGTGTGCAAGAGCTATTTGGGGCCGATCTCTTCAATTCCCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTTGACGCAGCTGGTAAGACCACGATCCTTTACAAGCTCAAGCTGGGAGAGATTGTCACCACCATTCCTACCATTGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACTGTCTGGGACGTTGGGGGTCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGACGAGCTGAGGGATGCAGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCAAATGCCATGAATGCTGCTGAGATCACCGACAAGCTTGGTCTTCACTCCCTCCGACAACGTCACTGGTACATCCAGAGCACATGTGCCACATCTGGTGAAGGACTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGCGTAGATGGGGTTTCCTTTGAGCTGGGATTGGTTCTGGAAATTCATATTGATGTCATTGTCCATTGTTTACGGGCATTTTTGTTGGATTACCTGATCTATACGATGTTCCTAGTGGATGATTTCTAGGTTGGTGTTGGATTCTGAATAATGAAAGAAATTTTGAAGTATTTGTCATGTTATCGACTCAATAGCATTGTTTTTATGTAATGAATTAATGATGGTTCTTAAAATAGGTGTATTTGTATGAGAATCATGTTT

Coding sequence (CDS)

GGAAATTCCAACGTGAACTACGAGGATTCCGATCGGCTCGTCATCGTCACTCTTCTTCCTCTCAGATTCTCAAATCCCAACTTCCATGGCGGCAATCACAACGAACCCTACCGCTCTTCTTGTTCTTCTTCCTCTTCATTCTCCTCTTCCACACTTCCATCACTTCGCTTCTTCTGCTTCTATCACTCCCAACTTCACCGCCCTCAGATTCTCTCAGTTCAACCTCGCCAACAGGCCTTCCAATCGCCAAATCCTCCCTCTGGTCAAGGCCGCCGCCCAAGGCTCTCTAGGCCATGGAGAATCCAAAATGTTTCTTCGGCATTGCTGAAAATGGGTATTCGAGGTGTAACGGTATCTGACGTGAAGGGCTTTGGTTCTCAAGGTGGATCTACAGAGAGGCATGGTGGGTCTGAATTTTCTGAAGACAACTTTGTCGCTAAAGTTAAGATGGAAATTGTGGTAGTTAAAGACCAGGTTGAAGCTGTCATTGACAAGATAATTGAGGAGGCAAGAACTGGTGAAATTGGTGATGGCAAAATTTTTGGCGAACGTGGAGAAAGAGCAGAGAGGATGACCGGAGGGCGATACGACATGTCTGTTAATCAACACTTACAATTTAAGCAACGTCATAACGGCGTCACCGAACCAAACGTCCTCATAATTCGCGAATTCGCATTTGATCGTGAAGGACAGCTTCTCTCTTGTGTGCAAGAGCTATTTGGGGCCGATCTCTTCAATTCCCTTTTCAGCCGGCTCTTTGCCAAGAAGGAGATGCGTATTCTCATGGTGGGTCTTGACGCAGCTGGTAAGACCACGATCCTTTACAAGCTCAAGCTGGGAGAGATTGTCACCACCATTCCTACCATTGGTTTTAATGTTGAGACTGTGGAATACAAGAACATCAGCTTCACTGTCTGGGACGTTGGGGGTCAAGACAAGATCCGACCATTGTGGAGGCATTATTTCCAAAACACCCAAGGACTTATTTTTGTGGTGGATAGCAATGACAGAGACCGTGTTGTTGAAGCTAGGGATGAGCTGCACAGAATGTTGAATGAGGACGAGCTGAGGGATGCAGTGCTTTTGGTATTTGCCAACAAGCAAGATCTTCCAAATGCCATGAATGCTGCTGAGATCACCGACAAGCTTGGTCTTCACTCCCTCCGACAACGTCACTGGTACATCCAGAGCACATGTGCCACATCTGGTGAAGGACTGTATGAAGGACTTGACTGGCTCTCAAACAATATTGCCAACAAGGCGTAG

Protein sequence

GNSNVNYEDSDRLVIVTLLPLRFSNPNFHGGNHNEPYRSSCSSSSSFSSSTLPSLRFFCFYHSQLHRPQILSVQPRQQAFQSPNPPSGQGRRPRLSRPWRIQNVSSALLKMGIRGVTVSDVKGFGSQGGSTERHGGSEFSEDNFVAKVKMEIVVVKDQVEAVIDKIIEEARTGEIGDGKIFGERGERAERMTGGRYDMSVNQHLQFKQRHNGVTEPNVLIIREFAFDREGQLLSCVQELFGADLFNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA

Homology

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BLAST of CcUC09G167540 vs. NCBI nr
Match: OMO64052.1 (Nitrogen regulatory protein PII [Corchorus capsularis])

HSP 1 Score: 480.3 bits (1235), Expect = 1.7e-131
Identity = 267/354 (75.42%), Postives = 277/354 (78.25%), Query Frame = 0


Query: 111 MGIRGVTVSDVKGFGSQGGSTERHGGSEFSEDNFVAKVKMEIVVVKDQVEAVIDKIIEEA 170
           MGIRGVTVSDV+GFG+QGGSTERHGGSEFSEDNFVAKVKMEIVV KDQVEAVIDKI+EEA
Sbjct: 1   MGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDNFVAKVKMEIVVSKDQVEAVIDKILEEA 60

Query: 171 RTGEIGDGKIF------------GERGERAERMTGGRYDM------------SVNQHLQF 230
           RTGEIGDGKIF            GERGE+AERMTGGR D+            ++N  L F
Sbjct: 61  RTGEIGDGKIFLVPVSDVIRVRTGERGEKAERMTGGRSDIDGPIFLAALFYANINMFLPF 120

Query: 231 KQR---HNGVT----EP------------NVLIIREFAFDREGQLLSCVQELFGADLFNS 290
                 H  V     EP            + L +      R+   LS          F  
Sbjct: 121 YSPLPVHAFVASLDHEPPPSWGGRSRVDLDCLCVDLDQLRRDNMGLS----------FTK 180

Query: 291 LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 350
           LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD
Sbjct: 181 LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 240

Query: 351 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 410
           VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK
Sbjct: 241 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 300

Query: 411 QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 301 QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 344

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BLAST of CcUC09G167540 vs. NCBI nr
Match: KAG6422610.1 (hypothetical protein SASPL_119189 [Salvia splendens])

HSP 1 Score: 359.0 bits (920), Expect = 5.6e-95
Identity = 186/225 (82.67%), Postives = 189/225 (84.00%), Query Frame = 0


Query: 203 HLQFKQRHNGVTEPNVLIIREFAFDREGQLLSCVQELFGADL------FNSLFSRLFAKK 262
           HL    R    T P++            QL+S    L   DL      F  LFSRLFAKK
Sbjct: 36  HLPVSPRTLSTTSPDLSF--------SAQLISAFVSLAMPDLEEMGLTFTKLFSRLFAKK 95

Query: 263 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRP 322
           EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRP
Sbjct: 96  EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRP 155

Query: 323 LWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNA 382
           LWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNA
Sbjct: 156 LWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNA 215

Query: 383 AEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           AEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 216 AEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 252

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BLAST of CcUC09G167540 vs. NCBI nr
Match: XP_009629758.1 (ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis])

HSP 1 Score: 357.8 bits (917), Expect = 1.2e-94
Identity = 181/221 (81.90%), Postives = 193/221 (87.33%), Query Frame = 0


Query: 204 LQFKQRHNGVTEPNVLIIREFAFDREGQLLSCVQELFGADL---FNSLFSRLFAKKEMRI 263
           L   QR++ V+     ++++    R    ++      G+++   F  LFSRLFAKKEMRI
Sbjct: 24  LHIFQRYSQVSPLIRSLLQKLFSGRSSYFINLRDHQQGSEMGLTFTKLFSRLFAKKEMRI 83

Query: 264 LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH 323
           LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH
Sbjct: 84  LMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRH 143

Query: 324 YFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIT 383
           YFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIT
Sbjct: 144 YFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEIT 203

Query: 384 DKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           DKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 204 DKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 244

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BLAST of CcUC09G167540 vs. NCBI nr
Match: VAH20469.1 (unnamed protein product [Triticum turgidum subsp. durum])

HSP 1 Score: 357.5 bits (916), Expect = 1.6e-94
Identity = 181/215 (84.19%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 207 KQRHNGVTEPNVLIIREFAFDREGQLLSCVQELFGADLFNSLFSRLFAKKEMRILMVGLD 266
           K R   +TEP+    ++    R G  +           F  LFSRLFAKKEMRILMVGLD
Sbjct: 58  KGREEEITEPSARTGQQAPRSRAGAEMGLT--------FTKLFSRLFAKKEMRILMVGLD 117

Query: 267 AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 326
           AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ
Sbjct: 118 AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 177

Query: 327 GLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 386
           GLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH
Sbjct: 178 GLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 237

Query: 387 SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 238 SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 264

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BLAST of CcUC09G167540 vs. NCBI nr
Match: KAF6996466.1 (hypothetical protein CFC21_012799 [Triticum aestivum])

HSP 1 Score: 357.5 bits (916), Expect = 1.6e-94
Identity = 181/215 (84.19%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 207 KQRHNGVTEPNVLIIREFAFDREGQLLSCVQELFGADLFNSLFSRLFAKKEMRILMVGLD 266
           K R   +TEP+    ++    R G  +           F  LFSRLFAKKEMRILMVGLD
Sbjct: 57  KGREEEITEPSARTGQQAPRSRTGAEMGLT--------FTKLFSRLFAKKEMRILMVGLD 116

Query: 267 AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 326
           AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ
Sbjct: 117 AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 176

Query: 327 GLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 386
           GLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH
Sbjct: 177 GLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 236

Query: 387 SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 237 SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 263

[Close]

BLAST of CcUC09G167540 vs. ExPASy Swiss-Prot
Match: P51823 (ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 SV=2)

HSP 1 Score: 355.1 bits (910), Expect = 1.1e-96
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

[Close]

BLAST of CcUC09G167540 vs. ExPASy Swiss-Prot
Match: P36397 (ADP-ribosylation factor 1 OS=Arabidopsis thaliana OX=3702 GN=ARF1 PE=1 SV=2)

HSP 1 Score: 354.8 bits (909), Expect = 1.4e-96
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of CcUC09G167540 vs. ExPASy Swiss-Prot
Match: Q9LQC8 (ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2)

HSP 1 Score: 353.6 bits (906), Expect = 3.1e-96
Identity = 174/177 (98.31%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

[Close]

BLAST of CcUC09G167540 vs. ExPASy Swiss-Prot
Match: P0DH91 (ADP-ribosylation factor 2-B OS=Arabidopsis thaliana OX=3702 GN=ARF2-B PE=2 SV=1)

HSP 1 Score: 353.6 bits (906), Expect = 3.1e-96
Identity = 174/177 (98.31%), Postives = 174/177 (98.31%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA KA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIAGKA 181

[Close]

BLAST of CcUC09G167540 vs. ExPASy Swiss-Prot
Match: Q06396 (ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0813400 PE=2 SV=3)

HSP 1 Score: 353.2 bits (905), Expect = 4.0e-96
Identity = 173/177 (97.74%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of CcUC09G167540 vs. ExPASy TrEMBL
Match: A0A1R3H131 (Nitrogen regulatory protein PII OS=Corchorus capsularis OX=210143 GN=CCACVL1_22080 PE=3 SV=1)

HSP 1 Score: 480.3 bits (1235), Expect = 8.1e-132
Identity = 267/354 (75.42%), Postives = 277/354 (78.25%), Query Frame = 0


Query: 111 MGIRGVTVSDVKGFGSQGGSTERHGGSEFSEDNFVAKVKMEIVVVKDQVEAVIDKIIEEA 170
           MGIRGVTVSDV+GFG+QGGSTERHGGSEFSEDNFVAKVKMEIVV KDQVEAVIDKI+EEA
Sbjct: 1   MGIRGVTVSDVRGFGAQGGSTERHGGSEFSEDNFVAKVKMEIVVSKDQVEAVIDKILEEA 60

Query: 171 RTGEIGDGKIF------------GERGERAERMTGGRYDM------------SVNQHLQF 230
           RTGEIGDGKIF            GERGE+AERMTGGR D+            ++N  L F
Sbjct: 61  RTGEIGDGKIFLVPVSDVIRVRTGERGEKAERMTGGRSDIDGPIFLAALFYANINMFLPF 120

Query: 231 KQR---HNGVT----EP------------NVLIIREFAFDREGQLLSCVQELFGADLFNS 290
                 H  V     EP            + L +      R+   LS          F  
Sbjct: 121 YSPLPVHAFVASLDHEPPPSWGGRSRVDLDCLCVDLDQLRRDNMGLS----------FTK 180

Query: 291 LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 350
           LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD
Sbjct: 181 LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWD 240

Query: 351 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 410
           VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK
Sbjct: 241 VGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANK 300

Query: 411 QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 301 QDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 344

[Close]

BLAST of CcUC09G167540 vs. ExPASy TrEMBL
Match: A0A287E9F9 (Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1)

HSP 1 Score: 360.1 bits (923), Expect = 1.2e-95
Identity = 181/199 (90.95%), Postives = 183/199 (91.96%), Query Frame = 0


Query: 225 AFDREGQLLSCVQELFGADL---FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGE 284
           AFDR      C     GAD+   F  LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGE
Sbjct: 6   AFDRLRSAQRCSHAGAGADMGLTFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGE 65

Query: 285 IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVV 344
           IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDR+RVV
Sbjct: 66  IVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRERVV 125

Query: 345 EARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 404
           EARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT
Sbjct: 126 EARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCAT 185

Query: 405 SGEGLYEGLDWLSNNIANK 421
           SGEGLYEGLDWLSNNIANK
Sbjct: 186 SGEGLYEGLDWLSNNIANK 204

[Close]

BLAST of CcUC09G167540 vs. ExPASy TrEMBL
Match: M5WCI7 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa010615mg PE=3 SV=1)

HSP 1 Score: 358.2 bits (918), Expect = 4.6e-95
Identity = 180/192 (93.75%), Postives = 182/192 (94.79%), Query Frame = 0


Query: 231 QLLSCVQELFGADL-FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 290
           +L S   +LF   L F  LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI
Sbjct: 52  RLRSAPSKLFKMGLSFTKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTI 111

Query: 291 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 350
           GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR
Sbjct: 112 GFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHR 171

Query: 351 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 410
           MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG
Sbjct: 172 MLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEG 231

Query: 411 LDWLSNNIANKA 422
           LDWLSNNIANKA
Sbjct: 232 LDWLSNNIANKA 243

[Close]

BLAST of CcUC09G167540 vs. ExPASy TrEMBL
Match: A0A452ZDW1 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 7.9e-95
Identity = 181/215 (84.19%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 207 KQRHNGVTEPNVLIIREFAFDREGQLLSCVQELFGADLFNSLFSRLFAKKEMRILMVGLD 266
           K R   +TEP+    ++    R G  +           F  LFSRLFAKKEMRILMVGLD
Sbjct: 66  KGREEEITEPSARTGQQAPRSRTGAEMGLT--------FTKLFSRLFAKKEMRILMVGLD 125

Query: 267 AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 326
           AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ
Sbjct: 126 AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 185

Query: 327 GLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 386
           GLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH
Sbjct: 186 GLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 245

Query: 387 SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 246 SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 272

[Close]

BLAST of CcUC09G167540 vs. ExPASy TrEMBL
Match: A0A446K566 (Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_1Bv1G172560 PE=3 SV=1)

HSP 1 Score: 357.5 bits (916), Expect = 7.9e-95
Identity = 181/215 (84.19%), Postives = 187/215 (86.98%), Query Frame = 0


Query: 207 KQRHNGVTEPNVLIIREFAFDREGQLLSCVQELFGADLFNSLFSRLFAKKEMRILMVGLD 266
           K R   +TEP+    ++    R G  +           F  LFSRLFAKKEMRILMVGLD
Sbjct: 58  KGREEEITEPSARTGQQAPRSRAGAEMGLT--------FTKLFSRLFAKKEMRILMVGLD 117

Query: 267 AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 326
           AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ
Sbjct: 118 AAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQ 177

Query: 327 GLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 386
           GLIFVVDSNDR+RVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH
Sbjct: 178 GLIFVVDSNDRERVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLH 237

Query: 387 SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 238 SLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 264

[Close]

BLAST of CcUC09G167540 vs. TAIR 10
Match: AT3G62290.1 (ADP-ribosylation factor A1E )

HSP 1 Score: 355.5 bits (911), Expect = 5.8e-98
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFS+LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

[Close]

BLAST of CcUC09G167540 vs. TAIR 10
Match: AT3G62290.2 (ADP-ribosylation factor A1E )

HSP 1 Score: 355.5 bits (911), Expect = 5.8e-98
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFS+LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

[Close]

BLAST of CcUC09G167540 vs. TAIR 10
Match: AT3G62290.3 (ADP-ribosylation factor A1E )

HSP 1 Score: 355.5 bits (911), Expect = 5.8e-98
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFS+LFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FGKLFSKLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 181

[Close]

BLAST of CcUC09G167540 vs. TAIR 10
Match: AT2G47170.1 (Ras-related small GTP-binding family protein )

HSP 1 Score: 354.8 bits (909), Expect = 9.8e-98
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FGKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

[Close]

BLAST of CcUC09G167540 vs. TAIR 10
Match: AT1G10630.1 (ADP-ribosylation factor A1F )

HSP 1 Score: 354.0 bits (907), Expect = 1.7e-97
Identity = 174/177 (98.31%), Postives = 175/177 (98.87%), Query Frame = 0


Query: 245 FNSLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 304
           F  LFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT
Sbjct: 5   FAKLFSRLFAKKEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFT 64

Query: 305 VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 364
           VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF
Sbjct: 65  VWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVF 124

Query: 365 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIANKA 422
           ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIA+KA
Sbjct: 125 ANKQDLPNAMNAAEITDKLGLHSLRQRHWYIQSTCATSGEGLYEGLDWLSNNIASKA 181

The following BLAST results are available for this feature:

BLAST of CcUC09G167540 vs. NCBI nr


Match Name	E-value	Identity	Description
OMO64052.1	1.7e-131	75.42	Nitrogen regulatory protein PII [Corchorus capsularis]	[more]
KAG6422610.1	5.6e-95	82.67	hypothetical protein SASPL_119189 [Salvia splendens]	[more]
XP_009629758.1	1.2e-94	81.90	ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]	[more]
VAH20469.1	1.6e-94	84.19	unnamed protein product [Triticum turgidum subsp. durum]	[more]
KAF6996466.1	1.6e-94	84.19	hypothetical protein CFC21_012799 [Triticum aestivum]	[more]

BLAST of CcUC09G167540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P51823	1.1e-96	98.31	ADP-ribosylation factor 2 OS=Oryza sativa subsp. japonica OX=39947 GN=ARF PE=2 S...	[more]
P36397	1.4e-96	98.31	ADP-ribosylation factor 1 OS=Arabidopsis thaliana OX=3702 GN=ARF1 PE=1 SV=2	[more]
Q9LQC8	3.1e-96	98.31	ADP-ribosylation factor 2-A OS=Arabidopsis thaliana OX=3702 GN=ARF2-A PE=2 SV=2	[more]
P0DH91	3.1e-96	98.31	ADP-ribosylation factor 2-B OS=Arabidopsis thaliana OX=3702 GN=ARF2-B PE=2 SV=1	[more]
Q06396	4.0e-96	97.74	ADP-ribosylation factor 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g08134...	[more]

BLAST of CcUC09G167540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1R3H131	8.1e-132	75.42	Nitrogen regulatory protein PII OS=Corchorus capsularis OX=210143 GN=CCACVL1_220...	[more]
A0A287E9F9	1.2e-95	90.95	Uncharacterized protein OS=Hordeum vulgare subsp. vulgare OX=112509 PE=3 SV=1	[more]
M5WCI7	4.6e-95	93.75	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa010615mg PE=3 SV=1	[more]
A0A452ZDW1	7.9e-95	84.19	Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 S...	[more]
A0A446K566	7.9e-95	84.19	Uncharacterized protein OS=Triticum turgidum subsp. durum OX=4567 GN=TRITD_1Bv1G...	[more]

BLAST of CcUC09G167540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G62290.1	5.8e-98	98.31	ADP-ribosylation factor A1E	[more]
AT3G62290.2	5.8e-98	98.31	ADP-ribosylation factor A1E	[more]
AT3G62290.3	5.8e-98	98.31	ADP-ribosylation factor A1E	[more]
AT2G47170.1	9.8e-98	98.31	Ras-related small GTP-binding family protein	[more]
AT1G10630.1	1.7e-97	98.31	ADP-ribosylation factor A1F	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002187	Nitrogen regulatory protein PII	PRINTS	PR00340	PIIGLNB	coord: 111..129 score: 50.77 coord: 141..164 score: 34.72 coord: 172..192 score: 49.58
IPR002187	Nitrogen regulatory protein PII	SMART	SM00938	P_II_3	coord: 97..193 e-value: 8.0E-24 score: 95.1
IPR002187	Nitrogen regulatory protein PII	PFAM	PF00543	P-II	coord: 97..181 e-value: 3.1E-24 score: 85.5
IPR002187	Nitrogen regulatory protein PII	PROSITE	PS51343	PII_GLNB_DOM	coord: 89..201 score: 24.004726
IPR006689	Small GTPase superfamily, ARF/SAR type	SMART	SM00178	sar_sub_1	coord: 242..417 e-value: 5.2E-26 score: 102.4
IPR006689	Small GTPase superfamily, ARF/SAR type	PFAM	PF00025	Arf	coord: 246..417 e-value: 5.5E-79 score: 263.7
None	No IPR available	SMART	SM00177	arf_sub_2	coord: 242..421 e-value: 8.6E-133 score: 457.1
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 258..420 e-value: 0.0041 score: -70.9
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 74..89
None	No IPR available	PANTHER	PTHR11711:SF340	ADP-RIBOSYLATION FACTOR A1F	coord: 245..421
None	No IPR available	PANTHER	PTHR11711	ADP RIBOSYLATION FACTOR-RELATED	coord: 245..421
None	No IPR available	PROSITE	PS51417	ARF	coord: 251..417 score: 25.658937
None	No IPR available	CDD	cd04150	Arf1_5_like	coord: 258..416 e-value: 6.38087E-127 score: 361.339
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 246..421 e-value: 2.6E-81 score: 273.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 254..419
IPR015867	Nitrogen regulatory protein PII/ATP phosphoribosyltransferase, C-terminal	GENE3D	3.30.70.120		coord: 95..199 e-value: 7.3E-36 score: 125.2
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 256..391 e-value: 2.0E-22 score: 77.7
IPR011322	Nitrogen regulatory PII-like, alpha/beta	SUPERFAMILY	54913	GlnB-like	coord: 97..192

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G167540.1	CcUC09G167540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006808	regulation of nitrogen utilization
molecular_function	GO:0030234	enzyme regulator activity
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding