CcUC09G167480 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G167480
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	short-chain dehydrogenase reductase 3b-like
Location	CicolChr09: 4079293 .. 4081430 (-)
RNA-Seq Expression	CcUC09G167480
Synteny	CcUC09G167480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAACAAGATGTTCGGTTTACATTGCTTTTCTTTTACAACAGAAATTTAGTAAGAAAAAATAGTTTTTCTAATATGTTCAATTTTATATGTTGAAACCAATTTCTAAATTGTTTTATGTTCTAATTGGTGAAGCTTTATGGTATTTTTAGAAATGATTTTGAAATTGTTAAAATCACTCTTGTGAAGGTCGAAATTATTTCAAAATACATTTTTAATCACTTAAAATTATTTTAATATTTAATTTTACACTTCTAATTAATGCAATTTTTATTTCATCAAAATTGATTTTGAATAATTTAAAGCGTGTTTCATAAAATTTTAAAAAATAATAAAACTGATTTTAGTGATTTTAGAATCACCCAAAATATATCCTCAACATATACTACAACGTTGAGACAACTAATCCTTCAGGTTCATACACACAAATGTCGCATGCAATCAAATTTATTCCAACCATTGAATTTTTTCTTATTATTCATACAATGTATGTATTTCACGATGTTCATTTTTATCTGGTCAATTTGTTTTTTTTAATTCATCAACACCCACGAGGCGTGAAAGGCGATAGGAACAATCAATCCCTTAACCAATAAGAGAAATAAGAATCTCAAAAGCCCTCTAACGCTTGTGAATTGAAAAACACAAAAACAACCAAAAGAATTCTAAAAAACCTAACAGCAAAACTGTTAGAGTATTAAATAATAATGTTCATCATTTTAATATTTAATATTAATGTTATATTATTTTGTATTATGTTAATTATATTAGTTGTAAGTTATTAATTGGTAGGTAAAAGTTCATTGGCTCATTTCAATCCTTGTATTTAAGTTTATTTCATCCCTCTGTAACGTTAAGAAACCCTAATGACATTTCTCCAAATTTTCTCAATTTCTTTCTATCTCTCCAAAGCTTTAAAAAACGAGCTAGGGGAAAGAATTTGGCCTAGAATTGTGTGTTTATTTCTAAACATAAAAAAAAAGTTTCTAATCATATTGACAACTTGATCAATTTGGCATCTTATACTTTGATACATACCTACAAAGGCCTAGATATTTTGTAAAGAGCTCATTATTTATAGTTTGCAAAATTTGAACAATATTTTTTAGTGCTAGAGATCGAGGGATCAGTGAGCACACATGGATATCTCAATTAGGTTGACACATCCTTAGTACCTTTATCACGCTCCGGTCGAGAAAGATATGTCTAAACCAAGGTAACAATATATTTTTCTCTCTGAACAACATATATTTCGCTCTTTATTATCCCATTATTACCAACATTTGAATTTTTACGCACAATCAAGCTCATTGGCTATGTACAAAATTCCCCTCATAGGCAGCTGCATGGGAAGGTGGCTCTTATCACCGGAGCTGCCAGCGGCATTGACGAGGAGACGGTAAGGCTATTTTCAGTCAACGGTGCTTTTGTTGTCGTAGCCGACATCGACGACAAACTGGGCCAGAAAGTGGTAGTCTCCATTGGCATCAACCATGCCAACTTTCACCACTATGACGTGAGAGGTGAGAAGCAAAGTTGAAGAAACAGTGAGCTATGCAGTCGAAAAATATGGAAAACTCGACATTCTCTTCAATTCTAACGCTTGAAATCTCCAACTTTGACAACGTAATGGCGACCAATGTCCGTGGGGTATGTTATATATATTGAAGCATGCAATTAACCCCAAATTTAAGTTGACAGGTTACAATATGTAAATTCTGTATTTTTTTCACTTTTTGGAGAAGGTGGTTTAGACGATTGAGCACGCCGGACGAATAACAGTAGAGAGAACGATACGAGGGTCAATCATTTGTATCGTGAGTGTGGCAGCGGTAATTACTGGGACAATACCATTAGCATACACAAGCTCAAAGCATGCGATCTTGGGGGTGGTGAGGTCAAGCTGCGGGGAGCTCAGGGCGTATGGGATTAGGGTGAATTGCGTTGTCACCGCAGGGGGTGACAACGCGGTTGTTGGCTTGTCGGGGTTTGAAATTGAAAGAGAGCGAGGTTGAAAAGAGATATATGGTTTGTTCATCGACATGCATGAACGGTGTGATATTGAAGGCTAGCCATATAGCTAAGGTTTCTTGCTTATAGCTAAGGTTTCTTGCTTATATAAGTGGACAAATCGATAA

mRNA sequence

ATGAAACAAGATGTTCGGTTTACATTGCTTTTCTTTTACAACAGAAATTTACTGCATGGGAAGGTGGCTCTTATCACCGGAGCTGCCAGCGGCATTGACGAGGAGACGGTAAGGCTATTTTCAGTCAACGGTGCTTTTGTTGTCGTAGCCGACATCGACGACAAACTGGGCCAGAAAGTGGTAGTCTCCATTGGCATCAACCATGCCAACTTTCACCACTATGACGTGAGAGCGGTAATTACTGGGACAATACCATTAGCATACACAAGCTCAAAGCATGCGATCTTGGGGGTGGTGAGGTCAAGCTGCGGGGAGCTCAGGGCGTATGGGATTAGGGTGAATTGCGTTGTCACCGCAGGGGGTGACAACGCGGTTGTTGGCTTGTCGGGGTTTGAAATTGAAAGAGAGCGAGCTAAGGTTTCTTGCTTATATAAGTGGACAAATCGATAA

Coding sequence (CDS)

ATGAAACAAGATGTTCGGTTTACATTGCTTTTCTTTTACAACAGAAATTTACTGCATGGGAAGGTGGCTCTTATCACCGGAGCTGCCAGCGGCATTGACGAGGAGACGGTAAGGCTATTTTCAGTCAACGGTGCTTTTGTTGTCGTAGCCGACATCGACGACAAACTGGGCCAGAAAGTGGTAGTCTCCATTGGCATCAACCATGCCAACTTTCACCACTATGACGTGAGAGCGGTAATTACTGGGACAATACCATTAGCATACACAAGCTCAAAGCATGCGATCTTGGGGGTGGTGAGGTCAAGCTGCGGGGAGCTCAGGGCGTATGGGATTAGGGTGAATTGCGTTGTCACCGCAGGGGGTGACAACGCGGTTGTTGGCTTGTCGGGGTTTGAAATTGAAAGAGAGCGAGCTAAGGTTTCTTGCTTATATAAGTGGACAAATCGATAA

Protein sequence

MKQDVRFTLLFFYNRNLLHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVRAVITGTIPLAYTSSKHAILGVVRSSCGELRAYGIRVNCVVTAGGDNAVVGLSGFEIERERAKVSCLYKWTNR

Homology

[Close]

BLAST of CcUC09G167480 vs. NCBI nr
Match: XP_023549392.1 (short-chain dehydrogenase reductase 3b-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 131.7 bits (330), Expect = 5.2e-27
Identity = 78/140 (55.71%), Postives = 85/140 (60.71%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           LHG VALITGAASGI EET RLF+ NGAFVVVADIDD+LG+KV  SIGI+ A+FHH DVR
Sbjct: 7   LHGNVALITGAASGIGEETARLFAANGAFVVVADIDDELGRKVAASIGIDQASFHHCDVR 66

Query: 78  -------------------------------------AVITGTIPLAYTSSKHAILGVVR 121
                                                A I G  P+AYTSSKHA+LGVVR
Sbjct: 67  DEKQVEETMVGTIKHGARRAMVKKNIRGSIICTASVSATIGGAGPMAYTSSKHAVLGVVR 126

[Close]

BLAST of CcUC09G167480 vs. NCBI nr
Match: XP_038897308.1 (short-chain dehydrogenase reductase 3b-like [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 5.7e-26
Identity = 83/181 (45.86%), Postives = 89/181 (49.17%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           LHGKVALITGAASGI +ET RLF  NGAFVVVADIDDKLGQKVV SIGI+ A+FHH DVR
Sbjct: 11  LHGKVALITGAASGIGKETARLFVANGAFVVVADIDDKLGQKVVASIGIDQASFHHCDVR 70

Query: 78  ------------------------------------------------------------ 117
                                                                       
Sbjct: 71  DEKQVEETVNYTVEKHSRLDILFSNAGITDPVISSILTLDMSNFDNVMATNVHGVVATIK 130

[Close]

BLAST of CcUC09G167480 vs. NCBI nr
Match: KAA0058548.1 (short-chain dehydrogenase reductase 3b-like isoform X2 [Cucumis melo var. makuwa] >TYK01625.1 short-chain dehydrogenase reductase 3b-like isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 126.7 bits (317), Expect = 1.7e-25
Identity = 76/123 (61.79%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINH--ANFHHYD 77
           LHGKVALITGAASGI EETVRLF  NGAFVV+ADI+DKLGQKVV+SIG++   A   H  
Sbjct: 236 LHGKVALITGAASGIGEETVRLFVANGAFVVIADINDKLGQKVVMSIGVDQVLATIKHAG 295

Query: 78  ---VRAVITGTI---------------PLAYTSSKHAILGVVRSSCGELRAYGIRVNCVV 121
              V+  I G+I                 AYTSSKHA+LGVVRSSCGEL  YGIRVNCV 
Sbjct: 296 GAMVKQEIRGSIICMGSTTSVLSLKTSLAAYTSSKHAVLGVVRSSCGELGTYGIRVNCVS 355

[Close]

BLAST of CcUC09G167480 vs. NCBI nr
Match: XP_031745294.1 (short-chain dehydrogenase reductase 3b isoform X2 [Cucumis sativus] >XP_031745295.1 short-chain dehydrogenase reductase 3b isoform X2 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-25
Identity = 82/184 (44.57%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           LHGKVALITGAASGI EET R+F+ NGAFVVVADIDD+LGQKVVVSIGINHA+FHH DVR
Sbjct: 6   LHGKVALITGAASGIGEETARVFAANGAFVVVADIDDELGQKVVVSIGINHASFHHCDVR 65

Query: 78  ------------------------------------------------------------ 121
                                                                       
Sbjct: 66  DEKQVEKTVNYTVEKHGRLDILFSNAGIIGPRTSSILTLDMSEFDNIMATNVRGIVATIK 125

[Close]

BLAST of CcUC09G167480 vs. NCBI nr
Match: XP_004135972.2 (short-chain dehydrogenase reductase 3b isoform X1 [Cucumis sativus])

HSP 1 Score: 125.9 bits (315), Expect = 2.8e-25
Identity = 82/184 (44.57%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           LHGKVALITGAASGI EET R+F+ NGAFVVVADIDD+LGQKVVVSIGINHA+FHH DVR
Sbjct: 16  LHGKVALITGAASGIGEETARVFAANGAFVVVADIDDELGQKVVVSIGINHASFHHCDVR 75

Query: 78  ------------------------------------------------------------ 121
                                                                       
Sbjct: 76  DEKQVEKTVNYTVEKHGRLDILFSNAGIIGPRTSSILTLDMSEFDNIMATNVRGIVATIK 135

[Close]

BLAST of CcUC09G167480 vs. ExPASy Swiss-Prot
Match: F4J2Z7 (Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE=2 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 2.3e-14
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 15  RNLLHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHY 74
           R +L GK+A+ITG ASGI  E VRLF+ +GA VV+ DI ++LGQ + VSIG++ A+F+  
Sbjct: 41  RQVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRC 100

Query: 75  DVRAVITGTIPLAYTSSKHAILGVVRSSCGELRAYG 111
           +V         + +T  KH  L V+ S+ G L A+G
Sbjct: 101 NVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFG 136

[Close]

BLAST of CcUC09G167480 vs. ExPASy Swiss-Prot
Match: Q94K41 (Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b PE=2 SV=1)

HSP 1 Score: 74.3 bits (181), Expect = 1.3e-12
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           L GK+ +ITG ASGI  E+VRLF+ +GA VV+ D+ D+LGQ V VSIG + A+++H DV 
Sbjct: 6   LDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDVT 65

Query: 78  AVITGTIPLAYTSSKHAILGVVRSSCGELRAY 110
                   + +T  K+  L V+ S+ G +  +
Sbjct: 66  NETEVENAVKFTVEKYGKLDVLFSNAGVIEPF 97

[Close]

BLAST of CcUC09G167480 vs. ExPASy Swiss-Prot
Match: F4J300 (Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE=3 SV=1)

HSP 1 Score: 73.6 bits (179), Expect = 2.2e-12
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           L GK+ +ITG ASGI  E  RLF+ +GA VV+ D+ ++LGQ V VSIG++ A+F+  D+ 
Sbjct: 6   LDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDIT 65

Query: 78  AVITGTIPLAYTSSKHAILGVVRSSCGELRAYG 111
                   + +T  KH  L V+ S+ G +  +G
Sbjct: 66  DETEVENAVKFTVEKHGKLDVLFSNAGVMEPHG 98

[Close]

BLAST of CcUC09G167480 vs. ExPASy Swiss-Prot
Match: O80713 (Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a PE=2 SV=1)

HSP 1 Score: 68.9 bits (167), Expect = 5.4e-11
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           L GK+A+ITG ASGI  E VRLF+ +GA VV+ D  ++LGQ V VS+G + A+F+  DV 
Sbjct: 6   LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDVT 65

Query: 78  AVITGTIPLAYTSSKHAILGVVRSSCGELRAYG 111
                   + +T  K+  L V+ S+ G +   G
Sbjct: 66  NEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPG 98

[Close]

BLAST of CcUC09G167480 vs. ExPASy Swiss-Prot
Match: O80714 (Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c PE=3 SV=1)

HSP 1 Score: 67.4 bits (163), Expect = 1.6e-10
Identity = 37/89 (41.57%), Postives = 53/89 (59.55%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           L GK+ +ITG ASGI  +  RLF+ +GA VV+ D+ ++LGQ V V IG + A+F+  DV 
Sbjct: 6   LEGKIVIITGGASGIGADAARLFTDHGAKVVIVDVQEELGQNVAVLIGKDKASFYRCDVT 65

Query: 78  AVITGTIPLAYTSSKHAILGVVRSSCGEL 107
                   + +T  KH  L V+ S+ G L
Sbjct: 66  NETEVEDAVKFTVEKHGKLDVLFSNAGVL 94

[Close]

BLAST of CcUC09G167480 vs. ExPASy TrEMBL
Match: A0A5D3BR09 (Short-chain dehydrogenase reductase 3b-like isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold3840G00020 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 8.0e-26
Identity = 76/123 (61.79%), Postives = 84/123 (68.29%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINH--ANFHHYD 77
           LHGKVALITGAASGI EETVRLF  NGAFVV+ADI+DKLGQKVV+SIG++   A   H  
Sbjct: 236 LHGKVALITGAASGIGEETVRLFVANGAFVVIADINDKLGQKVVMSIGVDQVLATIKHAG 295

Query: 78  ---VRAVITGTI---------------PLAYTSSKHAILGVVRSSCGELRAYGIRVNCVV 121
              V+  I G+I                 AYTSSKHA+LGVVRSSCGEL  YGIRVNCV 
Sbjct: 296 GAMVKQEIRGSIICMGSTTSVLSLKTSLAAYTSSKHAVLGVVRSSCGELGTYGIRVNCVS 355

[Close]

BLAST of CcUC09G167480 vs. ExPASy TrEMBL
Match: A0A0A0K5W0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414470 PE=4 SV=1)

HSP 1 Score: 125.9 bits (315), Expect = 1.4e-25
Identity = 82/184 (44.57%), Postives = 88/184 (47.83%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           LHGKVALITGAASGI EET R+F+ NGAFVVVADIDD+LGQKVVVSIGINHA+FHH DVR
Sbjct: 6   LHGKVALITGAASGIGEETARVFAANGAFVVVADIDDELGQKVVVSIGINHASFHHCDVR 65

Query: 78  ------------------------------------------------------------ 121
                                                                       
Sbjct: 66  DEKQVEKTVNYTVEKHGRLDILFSNAGIIGPRTSSILTLDMSEFDNIMATNVRGIVATIK 125

[Close]

BLAST of CcUC09G167480 vs. ExPASy TrEMBL
Match: A0A6J1JWS9 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC111488170 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 2.4e-22
Identity = 78/184 (42.39%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           LHGKVALITGAASGI EET RLF+ NGAFVVVADID++LG+KV  SIGI+ A+FHH DVR
Sbjct: 7   LHGKVALITGAASGIGEETARLFAANGAFVVVADIDNELGRKVAASIGIDQASFHHCDVR 66

Query: 78  ------------------------------------------------------------ 121
                                                                       
Sbjct: 67  DEKQVEEMVSHTVEKHGRLDILFSNAGIVGSLASILSLDISDFDDIFATNVRGVVGTIKH 126

[Close]

BLAST of CcUC09G167480 vs. ExPASy TrEMBL
Match: A0A5D3BE19 (Short-chain dehydrogenase reductase 3b-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold670G00120 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.1e-22
Identity = 78/184 (42.39%), Postives = 86/184 (46.74%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           LHGKVALITGAASGI  ET RLF+ NGAFVVVADIDD+LG KV  SIGI+ A+FHH DVR
Sbjct: 9   LHGKVALITGAASGIGAETARLFAANGAFVVVADIDDELGHKVAASIGIDQASFHHCDVR 68

Query: 78  -------------------------AVITGTIP--------------------------- 121
                                    A ITG++                            
Sbjct: 69  DETQVEKIVSYTIEKHGRLDILFSNAGITGSLSSIRELDMSDFDNVMAINVRGVVSSIKH 128

[Close]

BLAST of CcUC09G167480 vs. ExPASy TrEMBL
Match: A0A6J1JR99 (short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC111488187 PE=4 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 4.1e-22
Identity = 73/180 (40.56%), Postives = 85/180 (47.22%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           LHGKVALITGAA+GI EET RLF+ NGA+VVVADI+D+LGQKV  SIG++ A+FHH DVR
Sbjct: 8   LHGKVALITGAANGIGEETARLFAANGAYVVVADINDELGQKVAASIGVDQASFHHCDVR 67

Query: 78  ------------------------------------------------------------ 117
                                                                       
Sbjct: 68  DENQVEETVNYTVEKYGRLDILVSNAGITGSLTSILEFDMSNFDDVISTNVRGVVATIKH 127

[Close]

BLAST of CcUC09G167480 vs. TAIR 10
Match: AT3G29250.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.7e-15
Identity = 43/96 (44.79%), Postives = 62/96 (64.58%), Query Frame = 0


Query: 15  RNLLHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHY 74
           R +L GK+A+ITG ASGI  E VRLF+ +GA VV+ DI ++LGQ + VSIG++ A+F+  
Sbjct: 41  RQVLDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRC 100

Query: 75  DVRAVITGTIPLAYTSSKHAILGVVRSSCGELRAYG 111
           +V         + +T  KH  L V+ S+ G L A+G
Sbjct: 101 NVTDETDVENAVKFTVEKHGKLDVLFSNAGVLEAFG 136

[Close]

BLAST of CcUC09G167480 vs. TAIR 10
Match: AT3G29250.2 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 77.8 bits (190), Expect = 8.2e-15
Identity = 42/93 (45.16%), Postives = 60/93 (64.52%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           L GK+A+ITG ASGI  E VRLF+ +GA VV+ DI ++LGQ + VSIG++ A+F+  +V 
Sbjct: 6   LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDIQEELGQNLAVSIGLDKASFYRCNVT 65

Query: 78  AVITGTIPLAYTSSKHAILGVVRSSCGELRAYG 111
                   + +T  KH  L V+ S+ G L A+G
Sbjct: 66  DETDVENAVKFTVEKHGKLDVLFSNAGVLEAFG 98

[Close]

BLAST of CcUC09G167480 vs. TAIR 10
Match: AT2G47140.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 74.3 bits (181), Expect = 9.1e-14
Identity = 39/92 (42.39%), Postives = 58/92 (63.04%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           L GK+ +ITG ASGI  E+VRLF+ +GA VV+ D+ D+LGQ V VSIG + A+++H DV 
Sbjct: 6   LDGKIVIITGGASGIGAESVRLFTEHGARVVIVDVQDELGQNVAVSIGEDKASYYHCDVT 65

Query: 78  AVITGTIPLAYTSSKHAILGVVRSSCGELRAY 110
                   + +T  K+  L V+ S+ G +  +
Sbjct: 66  NETEVENAVKFTVEKYGKLDVLFSNAGVIEPF 97

[Close]

BLAST of CcUC09G167480 vs. TAIR 10
Match: AT3G29260.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 73.6 bits (179), Expect = 1.6e-13
Identity = 38/93 (40.86%), Postives = 57/93 (61.29%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           L GK+ +ITG ASGI  E  RLF+ +GA VV+ D+ ++LGQ V VSIG++ A+F+  D+ 
Sbjct: 6   LDGKIVIITGGASGIGAEAARLFTDHGAKVVIVDLQEELGQNVAVSIGLDKASFYRCDIT 65

Query: 78  AVITGTIPLAYTSSKHAILGVVRSSCGELRAYG 111
                   + +T  KH  L V+ S+ G +  +G
Sbjct: 66  DETEVENAVKFTVEKHGKLDVLFSNAGVMEPHG 98

[Close]

BLAST of CcUC09G167480 vs. TAIR 10
Match: AT2G47130.1 (NAD(P)-binding Rossmann-fold superfamily protein )

HSP 1 Score: 68.9 bits (167), Expect = 3.8e-12
Identity = 39/93 (41.94%), Postives = 56/93 (60.22%), Query Frame = 0


Query: 18  LHGKVALITGAASGIDEETVRLFSVNGAFVVVADIDDKLGQKVVVSIGINHANFHHYDVR 77
           L GK+A+ITG ASGI  E VRLF+ +GA VV+ D  ++LGQ V VS+G + A+F+  DV 
Sbjct: 6   LDGKIAIITGGASGIGAEAVRLFTDHGAKVVIVDFQEELGQNVAVSVGKDKASFYRCDVT 65

Query: 78  AVITGTIPLAYTSSKHAILGVVRSSCGELRAYG 111
                   + +T  K+  L V+ S+ G +   G
Sbjct: 66  NEKEVENAVKFTVEKYGKLDVLFSNAGVMEQPG 98

The following BLAST results are available for this feature:

BLAST of CcUC09G167480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023549392.1	5.2e-27	55.71	short-chain dehydrogenase reductase 3b-like [Cucurbita pepo subsp. pepo]	[more]
XP_038897308.1	5.7e-26	45.86	short-chain dehydrogenase reductase 3b-like [Benincasa hispida]	[more]
KAA0058548.1	1.7e-25	61.79	short-chain dehydrogenase reductase 3b-like isoform X2 [Cucumis melo var. makuwa...	[more]
XP_031745294.1	2.8e-25	44.57	short-chain dehydrogenase reductase 3b isoform X2 [Cucumis sativus] >XP_03174529...	[more]
XP_004135972.2	2.8e-25	44.57	short-chain dehydrogenase reductase 3b isoform X1 [Cucumis sativus]	[more]

BLAST of CcUC09G167480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4J2Z7	2.3e-14	44.79	Short-chain dehydrogenase reductase 4 OS=Arabidopsis thaliana OX=3702 GN=SDR4 PE...	[more]
Q94K41	1.3e-12	42.39	Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana OX=3702 GN=SDR3b ...	[more]
F4J300	2.2e-12	40.86	Short-chain dehydrogenase reductase 5 OS=Arabidopsis thaliana OX=3702 GN=SDR5 PE...	[more]
O80713	5.4e-11	41.94	Short-chain dehydrogenase reductase 3a OS=Arabidopsis thaliana OX=3702 GN=SDR3a ...	[more]
O80714	1.6e-10	41.57	Short-chain dehydrogenase reductase 3c OS=Arabidopsis thaliana OX=3702 GN=SDR3c ...	[more]

BLAST of CcUC09G167480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3BR09	8.0e-26	61.79	Short-chain dehydrogenase reductase 3b-like isoform X2 OS=Cucumis melo var. maku...	[more]
A0A0A0K5W0	1.4e-25	44.57	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G414470 PE=4 SV=1	[more]
A0A6J1JWS9	2.4e-22	42.39	short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]
A0A5D3BE19	4.1e-22	42.39	Short-chain dehydrogenase reductase 3b-like OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A6J1JR99	4.1e-22	40.56	short-chain dehydrogenase reductase 3b-like OS=Cucurbita maxima OX=3661 GN=LOC11...	[more]

BLAST of CcUC09G167480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G29250.1	1.7e-15	44.79	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29250.2	8.2e-15	45.16	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47140.1	9.1e-14	42.39	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT3G29260.1	1.6e-13	40.86	NAD(P)-binding Rossmann-fold superfamily protein	[more]
AT2G47130.1	3.8e-12	41.94	NAD(P)-binding Rossmann-fold superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.50.720		coord: 79..126 e-value: 1.2E-5 score: 26.7
None	No IPR available	GENE3D	3.40.50.720		coord: 11..78 e-value: 7.7E-10 score: 40.3
None	No IPR available	PANTHER	PTHR42820:SF16	SHORT-CHAIN DEHYDROGENASE REDUCTASE 3B	coord: 17..77 coord: 76..121
None	No IPR available	PANTHER	PTHR42820	SHORT-CHAIN DEHYDROGENASE REDUCTASE	coord: 17..77 coord: 76..121
IPR002347	Short-chain dehydrogenase/reductase SDR	PFAM	PF00106	adh_short	coord: 21..76 e-value: 3.5E-6 score: 26.6
IPR036291	NAD(P)-binding domain superfamily	SUPERFAMILY	51735	NAD(P)-binding Rossmann-fold domains	coord: 14..117

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G167480.1	CcUC09G167480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0016491	oxidoreductase activity