CcUC09G167190 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATAAAACGCGCGGGTAAATTGCAATTCAGGTAAACACAATGAAAATGATCAGATGGATCGAAATTCTCTGAAGCTTCTGAGTTTTCTAATGGAAGAGTGCATGAAATTCGTTTGTGAGTGGAAGATGAACGGAGGAAAATGAAGTTTGTTTCTCTCTCTTTCCCTGAAAATTTGGGGACGACGTTGATCCAGACGAATTCATTGAGGATTTTGCCACATTTACCCTAAAAAAGAATCTAGATCAATACCTCGAGAGGGAACCCTCAATTTTCATTTTCTGCGACTTCTTCTACTATTGAAAATTCTTCCTCCTAAATCCTGTTTCTGTAGATCTGATCATTTAACACCTTTGGCTTGATGATCCATCTGAAACTTTCAATGAATTCTGGACGGTGAATTCGAGAGGAGCGGATGGAAAAGGGAAGGGGAAGTTACGAGGAGAATCGTGATTGCAATCTTCTTCAGAGCAACGGTGTTAGTGTCAATCGGAGGATGCACAACAAGATGGAGATCGATGGAACGAGCTCTTCTGCAGATATGTCGTCGATTTCATTGTTATCTGGCGTTGGCTACATCGAGCATCCTGTTTCAAAGTTCGATACTCTTGCCGGAATTGCTATCAAGTACGGCGTCGAGGTAATTATGCATTCTGAATTTGTTTATGTTCATTTGTTTTTTGGTTTCTTTTGGTTCCTTGCTTGATTCAAAAGGTTCATTGGCCACCTTAATTCTGTTCCTCAAATTTTCTTTTATTTTCTTTTTTTCCCTTCTTTGCAACCATTTCATAAATTTTTAATTTTGTACCGGGTACGTTCATAATTTCTAAAATAAGAAATAATTGAAAATTTATAGGTTAAATTAATAATTTTGAAACTTCAACAATCAAATAGAGTCAGAATTTGTACCATATAGAGATATGTTTGAAATTAATGTACTGGTATAAATACTTCTATTGGACAGATGAAATTCAAAATACATATCCTTGCCTAAATAATTTTTTTTAAAAAATAACTTCAACTTTGTTTTCGTCTGAAAATTACTCGAATTCTAAATTTAATGCTAATCCTTTGAGTCTGCCAAATATTCCTACCTCTTATTTCATTTGTTGTGCAGTAGTAAAGAAAAAAGAAAAACTGATTCTTATTTCCTAACAAACCTTATAAAAATGTAATGGTCAAAAAATATATATATATTAATAATTATAGGTTTTTTTAGGTGAAAATGTCAATTTCACCTCTCCAATTATCGATTACGGTTAAGTTAGGTTCACTTTGGCCATTTTCAATCAACCTTCTTGAATTTTTTTTTTTTTCGATAATTGTTACAATTTATGCCTTAAAATTGAATACCATCCTAAGAATTATATAAATTCTCATGAAATGCTAATTTCACTTCAAAGAAGGATGATGAAAATTTAGGGCAAACGATTGACCGACCCTGTCTACTTGGGTGAAAATTGAACTTTCGCTTTCTTTTTCTTTGCCAAAACTATAAATAAAGTAGGAATGTTTGAATAGTGAATAAAAACTTCAAGTAAATTGGAACTTGTTCTGCTTCTCGTTATAATATTCTTTTTTCCTGTTTGTGACTAAGGAGTGATGACACATTCTCATATCATGATTATTCCCAACCCCGACCTCAATCTAATCATATATATGTTCTATATGTGCGTCCATTGTAACAACAAAATTATGTAAATGAGTGCAATAGGTCTCGGACATCAAGAGAATGAATGCATTGGTTACAGACCATCAAATGTTTGCTCTCAAATCTCTACAGATTCCAACTCCTGGAAAGCACCCTTCTCCTCACTTATCCGAAGATCTTGACATTTCCAGGTTTGTTTTTTCTTTTCTTTTTCTTCCCAAGTTTCATACCTGAACAGTGTAATAAACTTCTTCAGTTTTGTTTGTAGTATAAGACGACTGAATTCTCATACCTGAGCATAATTGAGACATATACACATCTGTCTTGAAATTAGATGTTCAAATCTCAACTCCTTAAACTAAAAGATAAAAATAAAACGAAGAAAATAAAAACAAAGTAGTATTCCTATCATATTTCTTAGGTTATAAATTCCTTTTACCCTTATTTGCATCCACAAATATCACGAGAGAACCTGAAAGTGGAGCATGTCTCACTTTATATAATTATAGCGGCTGTTGTTTTTGCTTGAAACTAGTTATTATATGTATATACACTCATCTGAAAGCTTCTACAGGAAGAGTAGTTGTGAGCAAGATTCAACTCGGCTCATATCCTCTAATCTATTGGACTCATTCCAATCACTGAGAATCAAATCCTCCACACTCAAAACTCCCTTACAAGCCACCCATCAAGCGAATATACCAGCAATCTGTGAAATGACTGCCTATAGAAAAGGCGAAGTCGACCAATTGGGAGCTCATCCCATGTTAGCATCCTCCCTTCCTGATGGAAGCCGCCATAGAAAATCAAGAAGCTTTGCAAATGGTTTTCCTTTCGAAAACATTGAACTCACCGATGTTATTACCTCCCCAACTGGAGCAACTGACTCCATCAAAGGGGGTGAACAACTGGTCCGGAGACGCCAAAAATCTATGGCAGACTTCTCCACGGCAACCGAAAGTATTTCGAACAAGACGTACACCAGCAATAATAGTGAATGTTTGTCAATGATAAGAAAAAGCTTAGATGTGAGACTGAAAGGAGCTGCTGCTGCAAGAACTAATGCTGCATCAAATGGGGTTAATGAAGTGAGTAAATTGACACCAAATTTAACTGATGATGTGGGAGGAGATTCATTTATGAGTAATAGAATTCTTGGTGGAAGAAGATCATCAAGCACATGTAATTTACAGGAAGCTGGAAAAGGACATTCTTCGTCATCCATGTGGTCGGCTTCTTCGTGGAGTTTGAAAACAGATCTTCAAGCACTCTCATCTGCAATGGTGACTAAGTCAATATTTGAAGGGTTGCCAAAGTCAGCATCAACCAGGTATAAAGCTTCAATGGATTGATTAATAATCCATTGGTTTTAACATATTTATTTGCAACATTTGTGCAGCTCAGTGATCAAAACCCTTGTATGTTTGAGATATCGAGCAAAGATTTTGAATAAGAAGAAGCCATAAATTTTGAAGATGAGAGAATCCTTTTTTGAAAGTGTAATCTATGTGAGAAGGAAATTACTACGCTCATGCTGTGTAACTCCATACCCGGTGAATGGATAAGGTACCCCCTCGAGTATTAGAAAACAGTTTTGCCCTTTTCTTTTTCTTTTGTTACTATCATTTTCCTCATCCTCATTTCTCAACTTTCACAAACAGGCATAGCTGTGGGAACCTTCAGCATCTTTTTTGTTTGGGCAGAAAATTACTCTTTTGGTCTTAGATATTGAGTTTGGCTTCTACATTTTACTTCTCAATTATGATCCACAG ATAAAACGCGCGGGTAAATTGCAATTCAGGTAAACACAATGAAAATGATCAGATGGATCGAAATTCTCTGAAGCTTCTGAGTTTTCTAATGGAAGAGTGCATGAAATTCGTTTGTGAGTGGAAGATGAACGGAGGAAAATGAAGTTTGTTTCTCTCTCTTTCCCTGAAAATTTGGGGACGACGTTGATCCAGACGAATTCATTGAGGATTTTGCCACATTTACCCTAAAAAAGAATCTAGATCAATACCTCGAGAGGGAACCCTCAATTTTCATTTTCTGCGACTTCTTCTACTATTGAAAATTCTTCCTCCTAAATCCTGTTTCTGTAGATCTGATCATTTAACACCTTTGGCTTGATGATCCATCTGAAACTTTCAATGAATTCTGGACGGTGAATTCGAGAGGAGCGGATGGAAAAGGGAAGGGGAAGTTACGAGGAGAATCGTGATTGCAATCTTCTTCAGAGCAACGGTGTTAGTGTCAATCGGAGGATGCACAACAAGATGGAGATCGATGGAACGAGCTCTTCTGCAGATATGTCGTCGATTTCATTGTTATCTGGCGTTGGCTACATCGAGCATCCTGTTTCAAAGTTCGATACTCTTGCCGGAATTGCTATCAAGTACGGCGTCGAGGTCTCGGACATCAAGAGAATGAATGCATTGGTTACAGACCATCAAATGTTTGCTCTCAAATCTCTACAGATTCCAACTCCTGGAAAGCACCCTTCTCCTCACTTATCCGAAGATCTTGACATTTCCAGGAAGAGTAGTTGTGAGCAAGATTCAACTCGGCTCATATCCTCTAATCTATTGGACTCATTCCAATCACTGAGAATCAAATCCTCCACACTCAAAACTCCCTTACAAGCCACCCATCAAGCGAATATACCAGCAATCTGTGAAATGACTGCCTATAGAAAAGGCGAAGTCGACCAATTGGGAGCTCATCCCATGTTAGCATCCTCCCTTCCTGATGGAAGCCGCCATAGAAAATCAAGAAGCTTTGCAAATGGTTTTCCTTTCGAAAACATTGAACTCACCGATGTTATTACCTCCCCAACTGGAGCAACTGACTCCATCAAAGGGGGTGAACAACTGGTCCGGAGACGCCAAAAATCTATGGCAGACTTCTCCACGGCAACCGAAAGTATTTCGAACAAGACGTACACCAGCAATAATAGTGAATGTTTGTCAATGATAAGAAAAAGCTTAGATGTGAGACTGAAAGGAGCTGCTGCTGCAAGAACTAATGCTGCATCAAATGGGGTTAATGAAGTGAGTAAATTGACACCAAATTTAACTGATGATGTGGGAGGAGATTCATTTATGAGTAATAGAATTCTTGGTGGAAGAAGATCATCAAGCACATGTAATTTACAGGAAGCTGGAAAAGGACATTCTTCGTCATCCATGTGGTCGGCTTCTTCGTGGAGTTTGAAAACAGATCTTCAAGCACTCTCATCTGCAATGGTGACTAAGTCAATATTTGAAGGGTTGCCAAAGTCAGCATCAACCAGCTCAGTGATCAAAACCCTTGTATGTTTGAGATATCGAGCAAAGATTTTGAATAAGAAGAAGCCATAAATTTTGAAGATGAGAGAATCCTTTTTTGAAAGTGTAATCTATGTGAGAAGGAAATTACTACGCTCATGCTGTGTAACTCCATACCCGGTGAATGGATAAGGCATAGCTGTGGGAACCTTCAGCATCTTTTTTGTTTGGGCAGAAAATTACTCTTTTGGTCTTAGATATTGAGTTTGGCTTCTACATTTTACTTCTCAATTATGATCCACAG ATGGAAAAGGGAAGGGGAAGTTACGAGGAGAATCGTGATTGCAATCTTCTTCAGAGCAACGGTGTTAGTGTCAATCGGAGGATGCACAACAAGATGGAGATCGATGGAACGAGCTCTTCTGCAGATATGTCGTCGATTTCATTGTTATCTGGCGTTGGCTACATCGAGCATCCTGTTTCAAAGTTCGATACTCTTGCCGGAATTGCTATCAAGTACGGCGTCGAGGTCTCGGACATCAAGAGAATGAATGCATTGGTTACAGACCATCAAATGTTTGCTCTCAAATCTCTACAGATTCCAACTCCTGGAAAGCACCCTTCTCCTCACTTATCCGAAGATCTTGACATTTCCAGGAAGAGTAGTTGTGAGCAAGATTCAACTCGGCTCATATCCTCTAATCTATTGGACTCATTCCAATCACTGAGAATCAAATCCTCCACACTCAAAACTCCCTTACAAGCCACCCATCAAGCGAATATACCAGCAATCTGTGAAATGACTGCCTATAGAAAAGGCGAAGTCGACCAATTGGGAGCTCATCCCATGTTAGCATCCTCCCTTCCTGATGGAAGCCGCCATAGAAAATCAAGAAGCTTTGCAAATGGTTTTCCTTTCGAAAACATTGAACTCACCGATGTTATTACCTCCCCAACTGGAGCAACTGACTCCATCAAAGGGGGTGAACAACTGGTCCGGAGACGCCAAAAATCTATGGCAGACTTCTCCACGGCAACCGAAAGTATTTCGAACAAGACGTACACCAGCAATAATAGTGAATGTTTGTCAATGATAAGAAAAAGCTTAGATGTGAGACTGAAAGGAGCTGCTGCTGCAAGAACTAATGCTGCATCAAATGGGGTTAATGAAGTGAGTAAATTGACACCAAATTTAACTGATGATGTGGGAGGAGATTCATTTATGAGTAATAGAATTCTTGGTGGAAGAAGATCATCAAGCACATGTAATTTACAGGAAGCTGGAAAAGGACATTCTTCGTCATCCATGTGGTCGGCTTCTTCGTGGAGTTTGAAAACAGATCTTCAAGCACTCTCATCTGCAATGGTGACTAAGTCAATATTTGAAGGGTTGCCAAAGTCAGCATCAACCAGCTCAGTGATCAAAACCCTTGTATGTTTGAGATATCGAGCAAAGATTTTGAATAAGAAGAAGCCATAA MEKGRGSYEENRDCNLLQSNGVSVNRRMHNKMEIDGTSSSADMSSISLLSGVGYIEHPVSKFDTLAGIAIKYGVEVSDIKRMNALVTDHQMFALKSLQIPTPGKHPSPHLSEDLDISRKSSCEQDSTRLISSNLLDSFQSLRIKSSTLKTPLQATHQANIPAICEMTAYRKGEVDQLGAHPMLASSLPDGSRHRKSRSFANGFPFENIELTDVITSPTGATDSIKGGEQLVRRRQKSMADFSTATESISNKTYTSNNSECLSMIRKSLDVRLKGAAAARTNAASNGVNEVSKLTPNLTDDVGGDSFMSNRILGGRRSSSTCNLQEAGKGHSSSSMWSASSWSLKTDLQALSSAMVTKSIFEGLPKSASTSSVIKTLVCLRYRAKILNKKKP Homology
BLAST of CcUC09G167190 vs. NCBI nr
Match: XP_038899497.1 (uncharacterized protein LOC120086775 [Benincasa hispida]) HSP 1 Score: 580.1 bits (1494), Expect = 1.4e-161 Identity = 310/371 (83.56%), Postives = 327/371 (88.14%), Query Frame = 0
BLAST of CcUC09G167190 vs. NCBI nr
Match: XP_008461364.1 (PREDICTED: uncharacterized protein LOC103499969 [Cucumis melo] >XP_008461365.1 PREDICTED: uncharacterized protein LOC103499969 [Cucumis melo] >XP_008461366.1 PREDICTED: uncharacterized protein LOC103499969 [Cucumis melo] >KAA0058575.1 Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 [Cucumis melo var. makuwa] >TYK10375.1 Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 [Cucumis melo var. makuwa]) HSP 1 Score: 537.0 bits (1382), Expect = 1.4e-148 Identity = 294/371 (79.25%), Postives = 323/371 (87.06%), Query Frame = 0
BLAST of CcUC09G167190 vs. NCBI nr
Match: XP_004136134.1 (uncharacterized protein LOC101214539 [Cucumis sativus] >KGN45081.1 hypothetical protein Csa_015558 [Cucumis sativus]) HSP 1 Score: 529.6 bits (1363), Expect = 2.2e-146 Identity = 290/372 (77.96%), Postives = 319/372 (85.75%), Query Frame = 0
BLAST of CcUC09G167190 vs. NCBI nr
Match: KAG7014272.1 (LysM and putative peptidoglycan-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 476.1 bits (1224), Expect = 2.9e-130 Identity = 270/376 (71.81%), Postives = 307/376 (81.65%), Query Frame = 0
BLAST of CcUC09G167190 vs. NCBI nr
Match: KAG6575718.1 (LysM and putative peptidoglycan-binding domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 475.7 bits (1223), Expect = 3.8e-130 Identity = 270/377 (71.62%), Postives = 307/377 (81.43%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy Swiss-Prot
Match: Q3B7I8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus tropicalis OX=8364 GN=lysmd2 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 8.0e-06 Identity = 31/71 (43.66%), Postives = 39/71 (54.93%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy Swiss-Prot
Match: Q3KPL3 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Xenopus laevis OX=8355 GN=lysmd2 PE=2 SV=2) HSP 1 Score: 52.4 bits (124), Expect = 1.4e-05 Identity = 31/71 (43.66%), Postives = 38/71 (53.52%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy Swiss-Prot
Match: Q1JQA8 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Bos taurus OX=9913 GN=LYSMD2 PE=2 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 2.3e-05 Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy Swiss-Prot
Match: Q6DEF4 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Danio rerio OX=7955 GN=lysmd2 PE=2 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 3.0e-05 Identity = 28/71 (39.44%), Postives = 41/71 (57.75%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy Swiss-Prot
Match: Q8IV50 (LysM and putative peptidoglycan-binding domain-containing protein 2 OS=Homo sapiens OX=9606 GN=LYSMD2 PE=1 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 3.0e-05 Identity = 30/74 (40.54%), Postives = 40/74 (54.05%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy TrEMBL
Match: A0A1S3CEJ2 (uncharacterized protein LOC103499969 OS=Cucumis melo OX=3656 GN=LOC103499969 PE=4 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 6.8e-149 Identity = 294/371 (79.25%), Postives = 323/371 (87.06%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy TrEMBL
Match: A0A5D3CFU3 (Peptidoglycan-binding LysM domain-containing protein, putative isoform 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00170 PE=4 SV=1) HSP 1 Score: 537.0 bits (1382), Expect = 6.8e-149 Identity = 294/371 (79.25%), Postives = 323/371 (87.06%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy TrEMBL
Match: A0A0A0KBC9 (LysM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G420740 PE=4 SV=1) HSP 1 Score: 529.6 bits (1363), Expect = 1.1e-146 Identity = 290/372 (77.96%), Postives = 319/372 (85.75%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy TrEMBL
Match: A0A6J1GPY6 (uncharacterized protein LOC111456405 OS=Cucurbita moschata OX=3662 GN=LOC111456405 PE=4 SV=1) HSP 1 Score: 472.2 bits (1214), Expect = 2.0e-129 Identity = 270/379 (71.24%), Postives = 308/379 (81.27%), Query Frame = 0
BLAST of CcUC09G167190 vs. ExPASy TrEMBL
Match: A0A6J1JQV7 (uncharacterized protein LOC111488087 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488087 PE=4 SV=1) HSP 1 Score: 466.8 bits (1200), Expect = 8.6e-128 Identity = 267/377 (70.82%), Postives = 304/377 (80.64%), Query Frame = 0
BLAST of CcUC09G167190 vs. TAIR 10
Match: AT5G08200.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 170.2 bits (430), Expect = 3.2e-42 Identity = 141/341 (41.35%), Postives = 180/341 (52.79%), Query Frame = 0
BLAST of CcUC09G167190 vs. TAIR 10
Match: AT5G23130.1 (Peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 151.4 bits (381), Expect = 1.5e-36 Identity = 133/336 (39.58%), Postives = 176/336 (52.38%), Query Frame = 0
BLAST of CcUC09G167190 vs. TAIR 10
Match: AT1G55000.1 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04 Identity = 18/46 (39.13%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of CcUC09G167190 vs. TAIR 10
Match: AT1G55000.2 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04 Identity = 18/46 (39.13%), Postives = 32/46 (69.57%), Query Frame = 0
BLAST of CcUC09G167190 vs. TAIR 10
Match: AT1G55000.3 (peptidoglycan-binding LysM domain-containing protein ) HSP 1 Score: 45.4 bits (106), Expect = 1.2e-04 Identity = 18/46 (39.13%), Postives = 32/46 (69.57%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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