CcUC09G167030 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G167030
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Ribosomal protein
Location	CicolChr09: 3789748 .. 3794352 (-)
RNA-Seq Expression	CcUC09G167030
Synteny	CcUC09G167030

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAATGACCACTTGTCATCCCACTGTGCACTCCTCCCTTTCCATGGCCCACACTTCTTCAGTGCACCCTCAAGACCTTTCTTCCCATCTCTCCTTCAGACCCACTGCTGCCTCTTCCACCGCCAATATTTTCTCTTTATGCCACCCCTTAATTCTGCAGCGCAGGGGTGGGAGGCCAATCAATTGGGTCGACCTTAATTTTAGGAGAGAATCTAGGGATCATCTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAGGTGGCTGAGGTTGTGGAAGAGAATGGAGAAGAGGGGAATGGTGGATCAGCTACTTCAATTGTGCCCAAGATTAAGAGGGGAAAGGCTGCATTGCCTCTCAAAAGGGACAGGGTAAGTTGGAGCTTAAGTTCTTGTATTGGCTGTTTTAAATCTATTTGACTGGCTTTTTGGATATGGTTTTTAGAGTTTGGTTGGTAGGTTTTACTTCATTTTAGGTTTTGCTTTAGAGGGTTTTAATTTTAGAAACTGTTGCCTGTTTATGGAGATGAAATATGTCTTAGGATTTTTCCTTTCGTTTTCCTGTCTACTTTTTGTTTGTCTTCCACAAAGTAGACTGGTTTCTTGGAGTTCTTGGCCCCCACCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTAAATCTTGGTTGAGCTAATCATTTTTGAGTGAGGCCCAGAAGTATGCCTCCTGAAGGGTCAGGTATGATGTCCCAAGAGATCAACTGTTTCAAAATGAAATAATTCCTGTAAGTGGAAGGGTACTTCTTGTTGGGGAAATCTAGACTCCATTAGTGGACTGTTCGGCTTGTTAACCCTGCCTTCCCAGTAAAAAATTTTGTACATTCGTCCCTAGTTTGTTATTCTGGTGTTCATTGGTTCTTTCCCTTCTACTGTTACCAACTTACCATATGGCTTATGTATATGTTTGTTTTAGTGCTGGACTTCACTTAAGTTTTATTCAACCTCTACTCAAAAGTTTTCGTGGATCGTTTGTTCTCTTTCAAGTTTCATTATCTTCCAGGATTAATAGTTCCTATTATGTCCATTTTCGATCAATGGCTTCATTAGTTGACTAGGAAAACTCTAGAAATTGGGCAGTCAAGTTCTGTTTTTTTGCTTTCTACCTTCCTTTGTAGCGTCAGCCCTTGCAGTTAGTTGTTATCCATATTTTCTTCTAAGTTCTACTCTGAACCAGACCGTAGGTTAAGAGAGGTCCATAAACGATATGTGCATTACTTTTGGTTCATATTGTAAGCTGTGTTCTCTTAAAATATTTATCTTCCCCCTTCTCTTATTACTATTGGATCAGCTTTGACATGAAACTGTGTTCTGAAAATGTGCAGACCCGGTCAAAGAGGTTCCTGGAAATTCAAAAACTGAGGGAAACCAAAATGGAGTATGACCTGAAAACAGCAATATCTTTGTTGAAACAAACGTCGAGCACGAAATTCATGGAAACCGCTGAAGCCCACTTTCGATTAAACATCGATCCCAAATATAATGATCAACAGCTGAGAGCAACAGTAAGTTTTCTTGGTAATTGCATGATAATTGATAAATAAAGTTAAATTATTAGAATACATGGGATTCCATATCAAAACCAATGGGCTTTGAGAGGAGTAGCCCTTATATATTATAAAGATTGAGAGGTCGCTTAATTTTTCCAATGTGGGATTCTCAACAAAAGTCCAATCTACTACTTGATTCTACTATATCTATGTCCTAAATCACCAATACTCACTTTTTTCATAGGTAAATCTGCCCAAGGGAACTGGACAGACAGTTAAGGTAGCTGTTCTTACTCAAGGTAATCACTAAATTTGACTTAAATGATATTTTTATTGGTTAGGATTCAATGGTGGAAGTAACTAGTTTTCAATGAGTTCTGGTTCCATTTCTTTCAATGAGAGAGCATTGTGGAATGGATATTAACACTTGATGCAACTAGTTATATGAACTTTAACAAGTGTGAATGGAAGCTCGGTTTCTACCCAAAAAAAAAAAAAAAAACTTGAGCAGGTATTATTGTCTTCAAAGTGCTTGTGAATTAGATAGTATGTGGTGGAGAATCCTCTATTTGAAAGGGAGTTCTGCTTGCTTGATTGAAAACGGCTCTGTTAGTGAGATTGCTTAAACTATCATGGAAATATTTCCCTTTATTATTTATGAGAAAATGTCCTTCTTGTAACCAGTGCGACGTGTGTGATACATGGTATTTGGAAAATGAAAATATTTATTTGTTCTTTATTAAATCTTCATACAGCTTAGCTAGTCATTGGTTAATACCGATAAGTTGGTTTTCCCCCTTATAATCAGTTTCGCAATAATTTGAGTGAAGAGAACGAGATGAACGCTAGGATATGGCTTTTTAATTAACTACCTTATATATATTTAAATTTTTGTTATTTATTTCTTCTTTTAGATGTGGTCATGTGGATTCTCTCATCTGTTCCCATCTCTCTAGTCAACTATAAATTTTGAGATTCCTTATATTGGCAATATTTCCGTGCTGCTTTTCCAACTATGCTGTTTGTATTTGCATTATATCTCTTCACATGGCACTTTTTGTCTTTTTCAGTTTTCATTTTCTTTCACTCATTTCATATCATCTCATTGCTTTCTGAATCATGCAGGTGAAAAATTTGACGAAGCAAAGAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTGCTTCACCAGATATGATGCCCAAGGTATGGTTCTTACATATTTTTCCTGCTATACATTGTGGTGGCTTTTAAAAAATATCAGTATTTCTAACAAAATTGTCCATAGCAATGAAGTAGTTTTCACATGTACTTTGAAATTGATTACCAAACAGGATTCCAATTTTCTTGTATGCAATACTACTGATAATTTTCCCTTCCATGCTTGTACGGAAGTATTTTTGGCTACCTCTCGCATTATCTATGACCGAAATTAAGAAGATATGGTATTGTGTTCGTGTCATAGATTAAAAGAGTCTGAGTAGATTAAAGCCTATAGATATTTAACTGATATGCGTGTGAATGGTTTCGGTGTTCACTTTTGAAGTTGGTTCTTATTTTGAGATATTTTAGTTAGTTGTGGCAACTATAAACAAACTATTAATCTGTTAACCCCCTCCTCTCTGTTTGTACCAGGTTGCTAGTCTAGGGAAGCTTCTAGGACCTCGAGGACTGATGCCGAATCCAAAAGCTGGCACTGTTACAACAAATATACCTCAGGTATAGATAAGAACCATCCACATTTGTATGCATCACAATTTGACAATAAAATTGTACATAATTACTTACATTTGACAATAAAATTGGACATAATTACATACATATTTTGGCTAAGAGGAAGGTTTTACTTAAGATACAGACTGATAATAGCTTTGTCCTGTTTAGGCTATAGCTGAATTCAAGCAGGGAAAAGTCGAATACAGAGCGGATAAAACCGGGATCGTTCACTTACCTTTTGGAAAGGCAGACTTTTCTGAAGATGACCTCCTTGTTAACTTGCTTGCTGCAATAGTATGTTCTTTACTAATCTCAAGTTCTCATAAACTCCATTGGTTTCTAAAAATTGTTGAGTCTTCCACCGTATTGATTTGTTCACATTAATCTAACAGAAATCGGTAGAAGTAAACAAGCCAACAGGTGCTAAAGGAGTATACTGGAAGAGCGCACATATATGCTCATCGATGGGGCCTTCAATTCGATTAAACATAAGGGACATGCTTGACTACAAGATCCCATCATCAAATGCTTGA

mRNA sequence

ATGGCAATGACCACTTGTCATCCCACTGTGCACTCCTCCCTTTCCATGGCCCACACTTCTTCAGTGCACCCTCAAGACCTTTCTTCCCATCTCTCCTTCAGACCCACTGCTGCCTCTTCCACCGCCAATATTTTCTCTTTATGCCACCCCTTAATTCTGCAGCGCAGGGGTGGGAGGCCAATCAATTGGGTCGACCTTAATTTTAGGAGAGAATCTAGGGATCATCTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAGGTGGCTGAGGTTGTGGAAGAGAATGGAGAAGAGGGGAATGGTGGATCAGCTACTTCAATTGTGCCCAAGATTAAGAGGGGAAAGGCTGCATTGCCTCTCAAAAGGGACAGGACCCGGTCAAAGAGGTTCCTGGAAATTCAAAAACTGAGGGAAACCAAAATGGAGTATGACCTGAAAACAGCAATATCTTTGTTGAAACAAACGTCGAGCACGAAATTCATGGAAACCGCTGAAGCCCACTTTCGATTAAACATCGATCCCAAATATAATGATCAACAGCTGAGAGCAACAGTAAATCTGCCCAAGGGAACTGGACAGACAGTTAAGGTAGCTGTTCTTACTCAAGGTGAAAAATTTGACGAAGCAAAGAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTGCTTCACCAGATATGATGCCCAAGGTTGCTAGTCTAGGGAAGCTTCTAGGACCTCGAGGACTGATGCCGAATCCAAAAGCTGGCACTGTTACAACAAATATACCTCAGGCTATAGCTGAATTCAAGCAGGGAAAAGTCGAATACAGAGCGGATAAAACCGGGATCGTTCACTTACCTTTTGGAAAGGCAGACTTTTCTGAAGATGACCTCCTTGTTAACTTGCTTGCTGCAATAAAATCGGTAGAAGTAAACAAGCCAACAGGTGCTAAAGGAGTATACTGGAAGAGCGCACATATATGCTCATCGATGGGGCCTTCAATTCGATTAAACATAAGGGACATGCTTGACTACAAGATCCCATCATCAAATGCTTGA

Coding sequence (CDS)

ATGGCAATGACCACTTGTCATCCCACTGTGCACTCCTCCCTTTCCATGGCCCACACTTCTTCAGTGCACCCTCAAGACCTTTCTTCCCATCTCTCCTTCAGACCCACTGCTGCCTCTTCCACCGCCAATATTTTCTCTTTATGCCACCCCTTAATTCTGCAGCGCAGGGGTGGGAGGCCAATCAATTGGGTCGACCTTAATTTTAGGAGAGAATCTAGGGATCATCTGGTTGTGGCTGCTTTAGCTGCGGAAATTGAGGTGGCTGAGGTTGTGGAAGAGAATGGAGAAGAGGGGAATGGTGGATCAGCTACTTCAATTGTGCCCAAGATTAAGAGGGGAAAGGCTGCATTGCCTCTCAAAAGGGACAGGACCCGGTCAAAGAGGTTCCTGGAAATTCAAAAACTGAGGGAAACCAAAATGGAGTATGACCTGAAAACAGCAATATCTTTGTTGAAACAAACGTCGAGCACGAAATTCATGGAAACCGCTGAAGCCCACTTTCGATTAAACATCGATCCCAAATATAATGATCAACAGCTGAGAGCAACAGTAAATCTGCCCAAGGGAACTGGACAGACAGTTAAGGTAGCTGTTCTTACTCAAGGTGAAAAATTTGACGAAGCAAAGAATGCAGGAGCAGATTTGGTTGGAGGTGAGGATTTGATAGAACAGATCAAAGGAGGTTTCATGGAATTTGATAAGTTGATTGCTTCACCAGATATGATGCCCAAGGTTGCTAGTCTAGGGAAGCTTCTAGGACCTCGAGGACTGATGCCGAATCCAAAAGCTGGCACTGTTACAACAAATATACCTCAGGCTATAGCTGAATTCAAGCAGGGAAAAGTCGAATACAGAGCGGATAAAACCGGGATCGTTCACTTACCTTTTGGAAAGGCAGACTTTTCTGAAGATGACCTCCTTGTTAACTTGCTTGCTGCAATAAAATCGGTAGAAGTAAACAAGCCAACAGGTGCTAAAGGAGTATACTGGAAGAGCGCACATATATGCTCATCGATGGGGCCTTCAATTCGATTAAACATAAGGGACATGCTTGACTACAAGATCCCATCATCAAATGCTTGA

Protein sequence

MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRPINWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA

Homology

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BLAST of CcUC09G167030 vs. NCBI nr
Match: XP_038897614.1 (50S ribosomal protein L1, chloroplastic-like [Benincasa hispida])

HSP 1 Score: 672.9 bits (1735), Expect = 1.5e-189
Identity = 347/360 (96.39%), Postives = 351/360 (97.50%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM TC+PTVHSSL+MAHTSSVHPQDLS   S RP A SSTANIFSLCHPLILQRRGGR 
Sbjct: 1   MAMATCNPTVHSSLTMAHTSSVHPQDLS---SLRPIAVSSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
           INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSI+PKIKRGKAALPLK
Sbjct: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSILPKIKRGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTS TKF+ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSITKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 357

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BLAST of CcUC09G167030 vs. NCBI nr
Match: KAA0058588.1 (50S ribosomal protein L1 [Cucumis melo var. makuwa] >TYK10388.1 50S ribosomal protein L1 [Cucumis melo var. makuwa])

HSP 1 Score: 663.3 bits (1710), Expect = 1.2e-186
Identity = 340/360 (94.44%), Postives = 347/360 (96.39%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM TC+PTVHSS +MAHTSSVHPQD SS LSFRP AASSTANIFSLCHPLILQRRGGR 
Sbjct: 1   MAMATCNPTVHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
            NWVDL F RE RDHLVVAALAAEIEVAEVVEENGEEGNGG+ATS +PKIK+GKAALPLK
Sbjct: 61  TNWVDLKFGRECRDHLVVAALAAEIEVAEVVEENGEEGNGGTATSALPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKF ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFAETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLL+AIKSVE NKPTGAKGVYWKSAHICSSMGPSIRLNIR+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEANKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

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BLAST of CcUC09G167030 vs. NCBI nr
Match: XP_004135947.2 (50S ribosomal protein L1, chloroplastic [Cucumis sativus] >KAE8646386.1 hypothetical protein Csa_016834 [Cucumis sativus])

HSP 1 Score: 662.5 bits (1708), Expect = 2.0e-186
Identity = 339/360 (94.17%), Postives = 349/360 (96.94%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM TC+PT+HSSL+MAHTSSVHPQD SS LSFRP AASSTANIFSLCHPLILQRRGGR 
Sbjct: 1   MAMATCNPTLHSSLTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
           INWVDL F RE RDHLVVAALAAEIEV E VEENGEEGNGG+ATS++PKIK+GKAALPLK
Sbjct: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKF+ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLL+AIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLN R+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 360

[Close]

BLAST of CcUC09G167030 vs. NCBI nr
Match: XP_022152504.1 (50S ribosomal protein L1, chloroplastic-like [Momordica charantia])

HSP 1 Score: 656.0 bits (1691), Expect = 1.9e-184
Identity = 336/360 (93.33%), Postives = 345/360 (95.83%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM TC PT  SSL+MAHTSSVHPQD+ S LSFRP AASSTA IFSLCHPL +QRRGGR 
Sbjct: 1   MAMATCSPTARSSLTMAHTSSVHPQDIPSLLSFRPMAASSTATIFSLCHPLTVQRRGGRS 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
           INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEG  G ATS+VPK+KRGKAALPLK
Sbjct: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGVAGLATSVVPKLKRGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ SSTKF+ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLLAA+KSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIR+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAVKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]

BLAST of CcUC09G167030 vs. NCBI nr
Match: XP_023004585.1 (50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima])

HSP 1 Score: 632.1 bits (1629), Expect = 2.9e-177
Identity = 328/360 (91.11%), Postives = 337/360 (93.61%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM TC P VHSSL+MAHTSSVHP DL S LSFRP AASSTA I SL HP IL+ RGG+P
Sbjct: 1   MAMATCCPAVHSSLTMAHTSSVHPLDLPSLLSFRPIAASSTAKILSLSHPFILRSRGGKP 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
           INWVD NFRRESRDHLVVAALAAEIEV E VEENGEE +  +AT IVPKIK+GKAALPLK
Sbjct: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEAS--TATLIVPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ  STKF+ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLN R+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 358

[Close]

BLAST of CcUC09G167030 vs. ExPASy Swiss-Prot
Match: Q9LE95 (50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 448.0 bits (1151), Expect = 1.0e-124
Identity = 242/350 (69.14%), Postives = 281/350 (80.29%), Query Frame = 0


Query: 13  SLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRPINWVDLNFRRES 72
           SL  A +S  + QD S    F+P   +S     SLC  L L +R    + WVD   +++S
Sbjct: 10  SLCYASSSFQYQQDPSFQTHFKPLLLNS-----SLCR-LTLNQRERSCLKWVDFTSQKQS 69

Query: 73  RDHL---VVAALAAEIEVAEVVEENGEEGNGGSATSIVP-KIKRGKAALPLKRDRTRSKR 132
              +   V+AA+AAE EVA++ EE GE  +GG AT   P K K+GKAALPLK DRTRSKR
Sbjct: 70  PKSVSFRVLAAVAAEAEVADMEEEEGE--SGGVATLPSPTKPKKGKAALPLKSDRTRSKR 129

Query: 133 FLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQLRATVNLPK 192
           FLEIQKLRE K EYDLKTA+SL+KQ SSTKF+ETAEAHFRLNIDPKYNDQQLRATV+LPK
Sbjct: 130 FLEIQKLREIKQEYDLKTALSLMKQMSSTKFVETAEAHFRLNIDPKYNDQQLRATVSLPK 189

Query: 193 GTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKVASL 252
           GTG+TVK+AVL QG+K DEAK AGAD+VGGE+LIEQIKGGFM+FDKLIA+ DMM KVASL
Sbjct: 190 GTGKTVKIAVLAQGDKIDEAKAAGADIVGGEELIEQIKGGFMDFDKLIATSDMMAKVASL 249

Query: 253 GKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDDLLV 312
           G++LGPRGLMP PKAGTVT N+ QA+ EFK+GKVE+R DKTGIVH+PFGK +F E+DLL+
Sbjct: 250 GRILGPRGLMPTPKAGTVTPNVAQAVEEFKKGKVEFRVDKTGIVHIPFGKLNFEEEDLLI 309

Query: 313 NLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSS 359
           NL A IKSVE NKPTGAKGVYWKSAHI SSMGPSIRLNIR+MLDYK PS+
Sbjct: 310 NLFATIKSVETNKPTGAKGVYWKSAHISSSMGPSIRLNIREMLDYKPPSN 351

[Close]

BLAST of CcUC09G167030 vs. ExPASy Swiss-Prot
Match: Q9LY66 (50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 PE=1 SV=1)

HSP 1 Score: 433.3 bits (1113), Expect = 2.6e-120
Identity = 241/360 (66.94%), Postives = 285/360 (79.17%), Query Frame = 0


Query: 3   MTTCHPTVHSSLSMAH-TSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRPI 62
           M  C    HSSL +A+  +S   QDL+   S   + ASS  N   L  PL+L   G R  
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLF-SFASSRPN--HLSFPLLL-LGGSRDR 60

Query: 63  NWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIV--PKIKRGKAALPL 122
               ++  R S    +V+A+AAE ++      + EE    +AT+++  PK K+GKAAL L
Sbjct: 61  RCAAID--RASNHKFIVSAVAAEADL------DTEEDLEQTATAVLDPPKPKKGKAALVL 120

Query: 123 KRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQ 182
           KRDRTRSKRFLEIQKLRETK EYD+ TAISLLKQT++T+F+E+ EAHFRLNIDPKYNDQQ
Sbjct: 121 KRDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQ 180

Query: 183 LRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASP 242
           LRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASP
Sbjct: 181 LRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASP 240

Query: 243 DMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKA 302
           DMM KVA LGK+LGPRGLMPNPKAGTVT NIPQAI EFK+GKVE+RADKTGIVH+PFGK 
Sbjct: 241 DMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKV 300

Query: 303 DFSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSN 360
           +F+E+DLL+N LAA+KSVE NKP GAKGVYWKSAHICSSMGPSI+LNIR+M+D+K P++N
Sbjct: 301 NFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPTAN 346

[Close]

BLAST of CcUC09G167030 vs. ExPASy Swiss-Prot
Match: P49208 (50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=RPL1 PE=2 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 1.5e-75
Identity = 144/168 (85.71%), Postives = 156/168 (92.86%), Query Frame = 0


Query: 110 IKRGKAALPLKRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRL 169
           +++GK    LK DR RSKRFLEIQKLRE K EYDLKTAISL+K+T+ TKF+ET EAHFRL
Sbjct: 41  LRQGKLHWRLKSDRVRSKRFLEIQKLRELKKEYDLKTAISLVKETAKTKFVETVEAHFRL 100

Query: 170 NIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGF 229
           NIDPKYNDQQLRATV+LPKGTG+ +KVAVLTQGE+FDEAKNAGADLVGGEDLIEQIKGGF
Sbjct: 101 NIDPKYNDQQLRATVSLPKGTGKPIKVAVLTQGERFDEAKNAGADLVGGEDLIEQIKGGF 160

Query: 230 MEFDKLIASPDMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEF 278
           MEFDKLIASPDMMPKVASLGK+LGPRGLMPNPKAGTVT NIPQAIAEF
Sbjct: 161 MEFDKLIASPDMMPKVASLGKILGPRGLMPNPKAGTVTANIPQAIAEF 208

[Close]

BLAST of CcUC09G167030 vs. ExPASy Swiss-Prot
Match: B0JNQ5 (50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 GN=rplA PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 5.7e-75
Identity = 141/230 (61.30%), Postives = 183/230 (79.57%), Query Frame = 0


Query: 126 SKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQLRATVN 185
           S+R  + Q   E K  Y+   A++LLK+ ++ KF ETAEAH RL IDPKY DQQLR TV+
Sbjct: 6   SRRLRDAQAKVENK-AYEPLEALTLLKELATAKFDETAEAHIRLGIDPKYTDQQLRTTVS 65

Query: 186 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 245
           LPKGTG+TV+VAV+T+GEK  EA NAGAD+VG E+LIE+I  G M+F+ LIA+PDMMPKV
Sbjct: 66  LPKGTGRTVRVAVITRGEKVQEANNAGADIVGSEELIEEIAKGMMDFEVLIATPDMMPKV 125

Query: 246 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 305
           A LG+ LGPRGLMP+PK GTVTT++  AIAEFK GK+E+RAD+TGIVH+ FGKA FS +D
Sbjct: 126 AKLGRQLGPRGLMPSPKGGTVTTDLTGAIAEFKAGKLEFRADRTGIVHVQFGKASFSAED 185

Query: 306 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKI 356
           LLVNL A  ++V+ N+P+GAKG YW++ ++ SSMGPSI+++I  + D K+
Sbjct: 186 LLVNLKALQETVDRNRPSGAKGRYWRTVYVSSSMGPSIQVDISALRDLKL 234

[Close]

BLAST of CcUC09G167030 vs. ExPASy Swiss-Prot
Match: Q3MA18 (50S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=rplA PE=3 SV=1)

HSP 1 Score: 282.7 bits (722), Expect = 5.7e-75
Identity = 140/230 (60.87%), Postives = 183/230 (79.57%), Query Frame = 0


Query: 126 SKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQLRATVN 185
           S+R  E+Q   E + EY    A+SLLK+T++ KF E AEAH RL IDPKY DQQLR TV 
Sbjct: 6   SRRLRELQAKVEDR-EYGPLDALSLLKETATAKFAEAAEAHIRLGIDPKYTDQQLRTTVA 65

Query: 186 LPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPDMMPKV 245
           LPKGTGQ V+VAV+ +GEK  EA NAGAD+ G E+LI++I+ G M+FDKLIA+PD+MP+V
Sbjct: 66  LPKGTGQIVRVAVIARGEKVTEASNAGADVFGSEELIDEIQKGRMDFDKLIATPDVMPQV 125

Query: 246 ASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDD 305
           A LGK+LGPRGLMP+PK GTVT +I  AIAEFK GK+E+RAD+TGIVH+ FGKA FS +D
Sbjct: 126 AKLGKMLGPRGLMPSPKGGTVTFDIASAIAEFKAGKLEFRADRTGIVHVMFGKASFSPED 185

Query: 306 LLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKI 356
           LLVNL A  ++++ N+P+GAKG YW++ ++ ++MGPSIR++I  + DYK+
Sbjct: 186 LLVNLKALQETIDRNRPSGAKGRYWRTFYVSATMGPSIRVDINALRDYKL 234

[Close]

BLAST of CcUC09G167030 vs. ExPASy TrEMBL
Match: A0A5D3CGN7 (Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00300 PE=3 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 5.8e-187
Identity = 340/360 (94.44%), Postives = 347/360 (96.39%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM TC+PTVHSS +MAHTSSVHPQD SS LSFRP AASSTANIFSLCHPLILQRRGGR 
Sbjct: 1   MAMATCNPTVHSSFTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
            NWVDL F RE RDHLVVAALAAEIEVAEVVEENGEEGNGG+ATS +PKIK+GKAALPLK
Sbjct: 61  TNWVDLKFGRECRDHLVVAALAAEIEVAEVVEENGEEGNGGTATSALPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKF ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFAETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLL+AIKSVE NKPTGAKGVYWKSAHICSSMGPSIRLNIR+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEANKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]

BLAST of CcUC09G167030 vs. ExPASy TrEMBL
Match: A0A0A0K886 (Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_7G420870 PE=3 SV=1)

HSP 1 Score: 658.7 bits (1698), Expect = 1.4e-185
Identity = 337/360 (93.61%), Postives = 348/360 (96.67%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM TC+PT+HSSL+MAHTSSVHPQD SS LSFRP AASSTANIFSLCHPLILQRRGGR 
Sbjct: 1   MAMATCNPTLHSSLTMAHTSSVHPQDPSSLLSFRPIAASSTANIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
           INWVDL F RE RDHLVVAALAAEIEV E VEENGEEGNGG+ATS++PKIK+GKAALPLK
Sbjct: 61  INWVDLKFGRECRDHLVVAALAAEIEVDEDVEENGEEGNGGTATSVLPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKF+ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEK DEAKNAGADLVGG+DLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKLDEAKNAGADLVGGKDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLL+AIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLN R+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLSAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 360

[Close]

BLAST of CcUC09G167030 vs. ExPASy TrEMBL
Match: A0A6J1DG73 (Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020212 PE=3 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 9.2e-185
Identity = 336/360 (93.33%), Postives = 345/360 (95.83%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM TC PT  SSL+MAHTSSVHPQD+ S LSFRP AASSTA IFSLCHPL +QRRGGR 
Sbjct: 1   MAMATCSPTARSSLTMAHTSSVHPQDIPSLLSFRPMAASSTATIFSLCHPLTVQRRGGRS 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
           INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEG  G ATS+VPK+KRGKAALPLK
Sbjct: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGVAGLATSVVPKLKRGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ SSTKF+ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMSSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLLAA+KSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIR+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAVKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 360

[Close]

BLAST of CcUC09G167030 vs. ExPASy TrEMBL
Match: A0A6J1KV03 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111497839 PE=3 SV=1)

HSP 1 Score: 632.1 bits (1629), Expect = 1.4e-177
Identity = 328/360 (91.11%), Postives = 337/360 (93.61%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM TC P VHSSL+MAHTSSVHP DL S LSFRP AASSTA I SL HP IL+ RGG+P
Sbjct: 1   MAMATCCPAVHSSLTMAHTSSVHPLDLPSLLSFRPIAASSTAKILSLSHPFILRSRGGKP 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
           INWVD NFRRESRDHLVVAALAAEIEV E VEENGEE +  +AT IVPKIK+GKAALPLK
Sbjct: 61  INWVDFNFRRESRDHLVVAALAAEIEVPEAVEENGEEAS--TATLIVPKIKKGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ  STKF+ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKKEYDLKTAISLLKQMCSTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLN R+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNTREMLDYKIPSSNA 358

[Close]

BLAST of CcUC09G167030 vs. ExPASy TrEMBL
Match: A0A6J1JXL6 (Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111488406 PE=3 SV=1)

HSP 1 Score: 630.2 bits (1624), Expect = 5.4e-177
Identity = 330/360 (91.67%), Postives = 339/360 (94.17%), Query Frame = 0


Query: 1   MAMTTCHPTVHSSLSMAHTSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRP 60
           MAM    PTV S L+MA TSSVHP DLSS  + RP AASSTA+IFSLCHPLILQRRGGR 
Sbjct: 1   MAMAGYSPTVPSPLAMARTSSVHPLDLSSLFAVRPIAASSTAHIFSLCHPLILQRRGGRS 60

Query: 61  INWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIVPKIKRGKAALPLK 120
           INWVDLNFRRESR HLVVAALAAEIEVAEVV+ENGE+ N G A SIVPKIKRGKAALPLK
Sbjct: 61  INWVDLNFRRESRVHLVVAALAAEIEVAEVVDENGED-NDGLAASIVPKIKRGKAALPLK 120

Query: 121 RDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQL 180
           RDRTRSKRFLEIQKLRE+K EYDLKTAISLLKQ S TKF+ETAEAHFRLNIDPKYNDQQL
Sbjct: 121 RDRTRSKRFLEIQKLRESKREYDLKTAISLLKQMSKTKFVETAEAHFRLNIDPKYNDQQL 180

Query: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240
           RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD
Sbjct: 181 RATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASPD 240

Query: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKAD 300
           MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVE+RADKTGIVHLPFGKAD
Sbjct: 241 MMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEFRADKTGIVHLPFGKAD 300

Query: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSNA 360
           FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIR+MLDYKIPSSNA
Sbjct: 301 FSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIREMLDYKIPSSNA 359

[Close]

BLAST of CcUC09G167030 vs. TAIR 10
Match: AT3G63490.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 433.3 bits (1113), Expect = 1.9e-121
Identity = 241/360 (66.94%), Postives = 285/360 (79.17%), Query Frame = 0


Query: 3   MTTCHPTVHSSLSMAH-TSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRPI 62
           M  C    HSSL +A+  +S   QDL+   S   + ASS  N   L  PL+L   G R  
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLF-SFASSRPN--HLSFPLLL-LGGSRDR 60

Query: 63  NWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIV--PKIKRGKAALPL 122
               ++  R S    +V+A+AAE ++      + EE    +AT+++  PK K+GKAAL L
Sbjct: 61  RCAAID--RASNHKFIVSAVAAEADL------DTEEDLEQTATAVLDPPKPKKGKAALVL 120

Query: 123 KRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQ 182
           KRDRTRSKRFLEIQKLRETK EYD+ TAISLLKQT++T+F+E+ EAHFRLNIDPKYNDQQ
Sbjct: 121 KRDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQ 180

Query: 183 LRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASP 242
           LRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASP
Sbjct: 181 LRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASP 240

Query: 243 DMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKA 302
           DMM KVA LGK+LGPRGLMPNPKAGTVT NIPQAI EFK+GKVE+RADKTGIVH+PFGK 
Sbjct: 241 DMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQAIEEFKKGKVEFRADKTGIVHIPFGKV 300

Query: 303 DFSEDDLLVNLLAAIKSVEVNKPTGAKGVYWKSAHICSSMGPSIRLNIRDMLDYKIPSSN 360
           +F+E+DLL+N LAA+KSVE NKP GAKGVYWKSAHICSSMGPSI+LNIR+M+D+K P++N
Sbjct: 301 NFTEEDLLINFLAAVKSVETNKPKGAKGVYWKSAHICSSMGPSIKLNIREMIDFKPPTAN 346

[Close]

BLAST of CcUC09G167030 vs. TAIR 10
Match: AT3G63490.2 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 292.4 bits (747), Expect = 5.1e-79
Identity = 180/299 (60.20%), Postives = 215/299 (71.91%), Query Frame = 0


Query: 3   MTTCHPTVHSSLSMAH-TSSVHPQDLSSHLSFRPTAASSTANIFSLCHPLILQRRGGRPI 62
           M  C    HSSL +A+  +S   QDL+   S   + ASS  N   L  PL+L   G R  
Sbjct: 1   MAAC--ATHSSLMLAYAAASTRSQDLTPTPSLF-SFASSRPN--HLSFPLLL-LGGSRDR 60

Query: 63  NWVDLNFRRESRDHLVVAALAAEIEVAEVVEENGEEGNGGSATSIV--PKIKRGKAALPL 122
               ++  R S    +V+A+AAE ++      + EE    +AT+++  PK K+GKAAL L
Sbjct: 61  RCAAID--RASNHKFIVSAVAAEADL------DTEEDLEQTATAVLDPPKPKKGKAALVL 120

Query: 123 KRDRTRSKRFLEIQKLRETKMEYDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQ 182
           KRDRTRSKRFLEIQKLRETK EYD+ TAISLLKQT++T+F+E+ EAHFRLNIDPKYNDQQ
Sbjct: 121 KRDRTRSKRFLEIQKLRETKKEYDVNTAISLLKQTANTRFVESVEAHFRLNIDPKYNDQQ 180

Query: 183 LRATVNLPKGTGQTVKVAVLTQGEKFDEAKNAGADLVGGEDLIEQIKGGFMEFDKLIASP 242
           LRATV+LPKGTGQTV VAVL QGEK DEAK+AGAD+VG +DLIEQIKGGFMEFDKLIASP
Sbjct: 181 LRATVSLPKGTGQTVIVAVLAQGEKVDEAKSAGADIVGSDDLIEQIKGGFMEFDKLIASP 240

Query: 243 DMMPKVASLGKLLGPRGLMPNPKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGK 299
           DMM KVA LGK+LGPRGLMPNPKAGTVT NIPQ+    ++GK+     K G+     GK
Sbjct: 241 DMMVKVAGLGKILGPRGLMPNPKAGTVTANIPQS---SRRGKLNSEQTKLGLFTFHLGK 282

[Close]

BLAST of CcUC09G167030 vs. TAIR 10
Match: AT2G42710.1 (Ribosomal protein L1p/L10e family )

HSP 1 Score: 164.9 bits (416), Expect = 1.2e-40
Identity = 87/215 (40.47%), Postives = 134/215 (62.33%), Query Frame = 0


Query: 142 YDLKTAISLLKQTSSTKFMETAEAHFRLNIDPKYNDQQLRATVNLPKGTGQTVKVAVLTQ 201
           +DL  AI  +K  +  KF ET EAH RL I+   ++  +R T+ LP    + VKVA   +
Sbjct: 188 FDLMEAIREIKGNAKAKFDETLEAHVRLGIEKGRSELIVRGTLALPHSVKKDVKVAFFAE 247

Query: 202 GEKFDEAKNAGADLVGGEDLIEQI-KGGFMEFDKLIASPDMMPKVASLGKLLGPRGLMPN 261
           G   ++AK AGAD+VGG +LIE+I K G ++FD+ +A+P MMP+V  + ++L   GLMPN
Sbjct: 248 GADAEDAKAAGADVVGGLELIEEILKSGKIDFDRCLATPKMMPRVYKISRILNNHGLMPN 307

Query: 262 PKAGTVTTNIPQAIAEFKQGKVEYRADKTGIVHLPFGKADFSEDDLLVNLLAAIKSVEVN 321
           PK G+VT ++ +A+ + K G  ++R DKT I+H+P GK  FSE+ L  N+ A + ++ + 
Sbjct: 308 PKQGSVTKDVTKAVKDAKAGHTKFRMDKTSILHVPLGKMSFSEEALRENVGAFMNALLLA 367

Query: 322 KPTGAKGV-----YWKSAHICSSMGPSIRLNIRDM 351
           KP G K       Y  + H+CS+MG    ++I+ +
Sbjct: 368 KPAGLKKTSKYAGYVNAFHLCSTMGKGYPVSIQSL 402

The following BLAST results are available for this feature:

BLAST of CcUC09G167030 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038897614.1	1.5e-189	96.39	50S ribosomal protein L1, chloroplastic-like [Benincasa hispida]	[more]
KAA0058588.1	1.2e-186	94.44	50S ribosomal protein L1 [Cucumis melo var. makuwa] >TYK10388.1 50S ribosomal pr...	[more]
XP_004135947.2	2.0e-186	94.17	50S ribosomal protein L1, chloroplastic [Cucumis sativus] >KAE8646386.1 hypothet...	[more]
XP_022152504.1	1.9e-184	93.33	50S ribosomal protein L1, chloroplastic-like [Momordica charantia]	[more]
XP_023004585.1	2.9e-177	91.11	50S ribosomal protein L1, chloroplastic-like [Cucurbita maxima]	[more]

BLAST of CcUC09G167030 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LE95	1.0e-124	69.14	50S ribosomal protein L1, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL1 PE=...	[more]
Q9LY66	2.6e-120	66.94	50S ribosomal protein L1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL1 ...	[more]
P49208	1.5e-75	85.71	50S ribosomal protein L1, chloroplastic (Fragment) OS=Pisum sativum OX=3888 GN=R...	[more]
B0JNQ5	5.7e-75	61.30	50S ribosomal protein L1 OS=Microcystis aeruginosa (strain NIES-843) OX=449447 G...	[more]
Q3MA18	5.7e-75	60.87	50S ribosomal protein L1 OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937)...	[more]

BLAST of CcUC09G167030 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CGN7	5.8e-187	94.44	Ribosomal protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G00...	[more]
A0A0A0K886	1.4e-185	93.61	Ribosomal protein OS=Cucumis sativus OX=3659 GN=Csa_7G420870 PE=3 SV=1	[more]
A0A6J1DG73	9.2e-185	93.33	Ribosomal protein OS=Momordica charantia OX=3673 GN=LOC111020212 PE=3 SV=1	[more]
A0A6J1KV03	1.4e-177	91.11	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111497839 PE=3 SV=1	[more]
A0A6J1JXL6	5.4e-177	91.67	Ribosomal protein OS=Cucurbita maxima OX=3661 GN=LOC111488406 PE=3 SV=1	[more]

BLAST of CcUC09G167030 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G63490.1	1.9e-121	66.94	Ribosomal protein L1p/L10e family	[more]
AT3G63490.2	5.1e-79	60.20	Ribosomal protein L1p/L10e family	[more]
AT2G42710.1	1.2e-40	40.47	Ribosomal protein L1p/L10e family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	PFAM	PF00687	Ribosomal_L1	coord: 151..341 e-value: 1.8E-47 score: 161.7
IPR028364	Ribosomal protein L1/ribosomal biogenesis protein	CDD	cd00403	Ribosomal_L1	coord: 144..345 e-value: 4.30124E-73 score: 223.985
IPR016095	Ribosomal protein L1, 3-layer alpha/beta-sandwich	GENE3D	3.40.50.790		coord: 189..280 e-value: 1.2E-82 score: 278.4
None	No IPR available	GENE3D	3.30.190.20		coord: 142..345 e-value: 1.2E-82 score: 278.4
None	No IPR available	PANTHER	PTHR23105	RIBOSOMAL PROTEIN L7AE FAMILY MEMBER	coord: 139..350
None	No IPR available	PANTHER	PTHR23105:SF110	MITOCHONDRIAL RIBOSOMAL PROTEIN, LARGE	coord: 139..350
IPR005878	Ribosomal protein L1, bacterial-type	TIGRFAM	TIGR01169	TIGR01169	coord: 125..348 e-value: 4.4E-93 score: 308.8
IPR005878	Ribosomal protein L1, bacterial-type	HAMAP	MF_01318_B	Ribosomal_L1_B	coord: 120..350 score: 39.367043
IPR023673	Ribosomal protein L1, conserved site	PROSITE	PS01199	RIBOSOMAL_L1	coord: 242..260
IPR023674	Ribosomal protein L1-like	SUPERFAMILY	56808	Ribosomal protein L1	coord: 128..347

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G167030.1	CcUC09G167030.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000470	maturation of LSU-rRNA
biological_process	GO:0006412	translation
cellular_component	GO:0022625	cytosolic large ribosomal subunit
cellular_component	GO:0015934	large ribosomal subunit
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0019843	rRNA binding
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0003723	RNA binding