CcUC09G166440 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC09G166440
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	homeobox-leucine zipper protein HOX11-like
Location	CicolChr09: 3272773 .. 3275577 (+)
RNA-Seq Expression	CcUC09G166440
Synteny	CcUC09G166440

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGGTATCACGTGTGTTTGTCAACCTGAGAGGTATGTCGGTCAAACTGGTTTCCCACACACCATATGGACGGGTAAACAATATTATTGCTTCTTTTTTTTTTTTTTTCTCTCCTTAACTTAATTAGTTCAAATCTATTCTAATTTTTTAGTTTTTTTTTCCTCTTTTCATTTTAGTTGGGATTAGTGTATCTTTTGTATAATCGATATCTAAATTTGAGTAAAACTCTAGTTTCGTTATTCAATAAACCATCGAATTTAGAGGAGCTATATAAATGACTCGAGATCACATCTAAAAATGAAATCTTAAAAATATACAACATAGTTAAGAAAAATTCAAAAGAACTAATAGTTATTATCTATATCAACAAGGAACATTTTTTTTTTAATAGCTAAATTATAGGACTTCAAAAGTTAAATGTGATTGACTTGACGCAGTTCTATTCCGAGTGATTTTTGAAAATTTTCTTTTTGACTATTTATAAACTTTAAGTTTAAAATTATCGGACTAATTTTCTTTTTTATATTATAACAAAAATTTTAAAATTCATTTAAGCTAAGTTCACTTAAAAAAAAACTTATGAAAATGATTCTTTCAAAAAAATATGAAAATGAGAAAGTTAAAAACGAAAATTCAAAATTAGAAAATCTTGGGATTTAAATACATCCAGAGATTTTAGGCCTAATTAATATTATAATTAATATTTTTTTATTATATTTTTTTGGTTCTGCATCTGCCTTATATTTATTTGACTCATCGTATCAGAATTTCTATCCTCTCTTTTTTATCCGCAGACCTCTCCACTTCCGAACTCCCCGTTTAGTCCATTTCCTTTCTTTCTGCCCGTGCGCCGCCGCACCGATGGAGCTTGGCCTGAGCTTGGGCGACGCCCCCAAGCCCTTCCGCTTCGTCGAGAAGCAACCACAAGTACCGCCGCCACAGCGAGTTCTTTCCCGGCCAGATTTAGGGTTCTGTGTCGACTTGTCGATTGGCCGTCCGGTTGTTGGAGAGAAAGAAGACGACGAAGAAAAACCTAATCAGAGAGAAGATGAATCCGACGGTAATGAAGATCCACCGATTCAACTCGATCTTCTCCCTCATAATCCCGTTCCTCGACACCTAACTAATCCGTACCAAGGATTCCCATGGCCGTCGTCCGAAAACGGTAAGATTCTCAAAACCCTCACTAAATAACTTAAAGAATCAAAGAATCACTTCCCCCGAATTTTTCTAACCGAAATCGGTTACTTCCAGATGAAGGCGAAGACCGAACCGCATCGCCGAACAGCGCAGCGTCGTCGTTTCAGATGGAATTTGGACTGTACGGCGGCGGAGGAAACATTTCCTGCCGGAGAGATCAAATTGAAAATGGCGTAATGAACGAAGTAGGTGAATCTGGAAGAGCGTCTTCTAGAGCTAGCGATGAAGACGAAAATGGCTGTACGAGGAAGAAACTTAGACTCTCTAAAGAACAATCCGCTTTCCTTGAAGAAAGCTTCAAAGAACACAACACTTTAAACCCTGTAAGTTCAAAATTCCAGAAAAAAAACCCAGCGATCGATTCGTTAGACGTTATTTCTGATTCCGATTTGAATCGATTGCAGAAACAGAAGCTAGCACTGGCTAAGCAACTGAATCTTCTTCCTCGCCAAGTGGAAGTTTGGTTCCAAAACAGAAGGGCTAGGTTCGTTTGGGCCTGTTTTTCGAATTCAATTCGATTCATCTATAAAATTAGTTTCTAATTTAGTGAAATTAACAGGACGAAATTGAAGCAAACGGAAGTGGATTGCGAGTATTTGAAAAGATGTTGTGAGACATTAACAGAAGAGAACAGACGGCTTCAAAAGGAGCTTCAAGAATTAAGAGCTTTGAAAACAACGAACTCATTCTACATGCAATTACCAGCCACAACACTCACCATGTGTCCTTCTTGTGAAAGAGTAACCTCAACTTCCGCTGCTTCCACCGTCGCTGCCGTCGCCACCAGTGGAGGCAAATCGACGGAGGGAGTTTCAAAACGATCTGGGTTCGCCATTGCTGGCCGACCCAGTTCTTCCTCTTTCCCATTTTCTGCTAAAACGCAGTCCCACCAGTCAACAGCTTCATGATAACGAGATGGGTTTAGGCGAATCATGATGGTGGTCCCTTTTGTACATAAACCCTTTTCCCAAAAGCAAAAGAGGAAAAAAAAAAAGGAAAATCAGTAGAATCCGAGAAAAAGAAGAAAAAAAAAAAAACAGGTTATCATCATCATCACATTTCTCTTTCTCCTCTCCCTCTTCTTGGAGCTGTTTCTTCACCATTTTGGGGATTGTTTGTTCTTATGGGATTTGTTTATCTTAGATATTATTATTTTTTAAAATTAATTTTTTTTCATTCCCCTTGGATTCTCTTTCTGATATATTGTTAAGAAAGAAACCTAAGAAAAAAAATTCTTATATACAATCATTAGTGACTTGTGTTCTTGTTGGTGTTCCAGATTTATTTTTCCGCTGTTTGTTTCTGTAAACATGATTACTGGAAAAAAGGAGAAGTGATGAATGAGTTTGTTAATGATGATGAGGTTCAATGACCTGAGAAAACAGAGTATTGATGGGGCGAGTTTCTTGGGGAAGAAGATGATACAGTCAAAAACCAAAGGATTGGGGTAGGGGGTAATAATGTAAATTCACGTCCTCTTGTTCCCCGTGGATGTGCCAATTATTATGACTGTGGTGTCCCAAACCGGCATTTCGTACTTTTATGCTGCGTTTTAATTTTAACCTCGGTAAAAGTATTTCAATTTGTTCGGTAATTAACACAAC

mRNA sequence

ATGCGACCTCTCCACTTCCGAACTCCCCGTTTAGTCCATTTCCTTTCTTTCTGCCCGTGCGCCGCCGCACCGATGGAGCTTGGCCTGAGCTTGGGCGACGCCCCCAAGCCCTTCCGCTTCGTCGAGAAGCAACCACAAGTACCGCCGCCACAGCGAGTTCTTTCCCGGCCAGATTTAGGGTTCTGTGTCGACTTGTCGATTGGCCGTCCGGTTGTTGGAGAGAAAGAAGACGACGAAGAAAAACCTAATCAGAGAGAAGATGAATCCGACGGTAATGAAGATCCACCGATTCAACTCGATCTTCTCCCTCATAATCCCGTTCCTCGACACCTAACTAATCCGTACCAAGGATTCCCATGGCCGTCGTCCGAAAACGATGAAGGCGAAGACCGAACCGCATCGCCGAACAGCGCAGCGTCGTCGTTTCAGATGGAATTTGGACTGTACGGCGGCGGAGGAAACATTTCCTGCCGGAGAGATCAAATTGAAAATGGCGTAATGAACGAAGTAGGTGAATCTGGAAGAGCGTCTTCTAGAGCTAGCGATGAAGACGAAAATGGCTGTACGAGGAAGAAACTTAGACTCTCTAAAGAACAATCCGCTTTCCTTGAAGAAAGCTTCAAAGAACACAACACTTTAAACCCTGTAAGTTCAAAATTCCAGAAAAAAAACCCAGCGATCGATTCGTTAGACGTTATTTCTGATTCCGATTTGAATCGATTGCAGAAACAGAAGCTAGCACTGGCTAAGCAACTGAATCTTCTTCCTCGCCAAGTGGAAGTTTGGTTCCAAAACAGAAGGGCTAGGACGAAATTGAAGCAAACGGAAGTGGATTGCGAGTATTTGAAAAGATGTTGTGAGACATTAACAGAAGAGAACAGACGGCTTCAAAAGGAGCTTCAAGAATTAAGAGCTTTGAAAACAACGAACTCATTCTACATGCAATTACCAGCCACAACACTCACCATGTGTCCTTCTTGTGAAAGAGTAACCTCAACTTCCGCTGCTTCCACCGTCGCTGCCGTCGCCACCAGTGGAGGCAAATCGACGGAGGGAGTTTCAAAACGATCTGGGTTCGCCATTGCTGGCCGACCCAGTTCTTCCTCTTTCCCATTTTCTGCTAAAACGCAGTCCCACCAGTCAACAGCTTCATGATAACGAGATGGGTTTAGGCGAATCATGATGGTGGTCCCTTTTGTACATAAACCCTTTTCCCAAAAGCAAAAGAGGAAAAAAAAAAAGGAAAATCAGTAGAATCCGAGAAAAAGAAGAAAAAAAAAAAAACAGGTTATCATCATCATCACATTTCTCTTTCTCCTCTCCCTCTTCTTGGAGCTGTTTCTTCACCATTTTGGGGATTGTTTGTTCTTATGGGATTTGTTTATCTTAGATATTATTATTTTTTAAAATTAATTTTTTTTCATTCCCCTTGGATTCTCTTTCTGATATATTGTTAAGAAAGAAACCTAAGAAAAAAAATTCTTATATACAATCATTAGTGACTTGTGTTCTTGTTGGTGTTCCAGATTTATTTTTCCGCTGTTTGTTTCTGTAAACATGATTACTGGAAAAAAGGAGAAGTGATGAATGAGTTTGTTAATGATGATGAGGTTCAATGACCTGAGAAAACAGAGTATTGATGGGGCGAGTTTCTTGGGGAAGAAGATGATACAGTCAAAAACCAAAGGATTGGGGTAGGGGGTAATAATGTAAATTCACGTCCTCTTGTTCCCCGTGGATGTGCCAATTATTATGACTGTGGTGTCCCAAACCGGCATTTCGTACTTTTATGCTGCGTTTTAATTTTAACCTCGGTAAAAGTATTTCAATTTGTTCGGTAATTAACACAAC

Coding sequence (CDS)

ATGCGACCTCTCCACTTCCGAACTCCCCGTTTAGTCCATTTCCTTTCTTTCTGCCCGTGCGCCGCCGCACCGATGGAGCTTGGCCTGAGCTTGGGCGACGCCCCCAAGCCCTTCCGCTTCGTCGAGAAGCAACCACAAGTACCGCCGCCACAGCGAGTTCTTTCCCGGCCAGATTTAGGGTTCTGTGTCGACTTGTCGATTGGCCGTCCGGTTGTTGGAGAGAAAGAAGACGACGAAGAAAAACCTAATCAGAGAGAAGATGAATCCGACGGTAATGAAGATCCACCGATTCAACTCGATCTTCTCCCTCATAATCCCGTTCCTCGACACCTAACTAATCCGTACCAAGGATTCCCATGGCCGTCGTCCGAAAACGATGAAGGCGAAGACCGAACCGCATCGCCGAACAGCGCAGCGTCGTCGTTTCAGATGGAATTTGGACTGTACGGCGGCGGAGGAAACATTTCCTGCCGGAGAGATCAAATTGAAAATGGCGTAATGAACGAAGTAGGTGAATCTGGAAGAGCGTCTTCTAGAGCTAGCGATGAAGACGAAAATGGCTGTACGAGGAAGAAACTTAGACTCTCTAAAGAACAATCCGCTTTCCTTGAAGAAAGCTTCAAAGAACACAACACTTTAAACCCTGTAAGTTCAAAATTCCAGAAAAAAAACCCAGCGATCGATTCGTTAGACGTTATTTCTGATTCCGATTTGAATCGATTGCAGAAACAGAAGCTAGCACTGGCTAAGCAACTGAATCTTCTTCCTCGCCAAGTGGAAGTTTGGTTCCAAAACAGAAGGGCTAGGACGAAATTGAAGCAAACGGAAGTGGATTGCGAGTATTTGAAAAGATGTTGTGAGACATTAACAGAAGAGAACAGACGGCTTCAAAAGGAGCTTCAAGAATTAAGAGCTTTGAAAACAACGAACTCATTCTACATGCAATTACCAGCCACAACACTCACCATGTGTCCTTCTTGTGAAAGAGTAACCTCAACTTCCGCTGCTTCCACCGTCGCTGCCGTCGCCACCAGTGGAGGCAAATCGACGGAGGGAGTTTCAAAACGATCTGGGTTCGCCATTGCTGGCCGACCCAGTTCTTCCTCTTTCCCATTTTCTGCTAAAACGCAGTCCCACCAGTCAACAGCTTCATGA

Protein sequence

MRPLHFRTPRLVHFLSFCPCAAAPMELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQREDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQMEFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAIAGRPSSSSFPFSAKTQSHQSTAS

Homology

[Close]

BLAST of CcUC09G166440 vs. NCBI nr
Match: XP_038896826.1 (homeobox-leucine zipper protein HOX11-like [Benincasa hispida])

HSP 1 Score: 588.2 bits (1515), Expect = 5.2e-164
Identity = 317/361 (87.81%), Postives = 322/361 (89.20%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFVEKQPQVPPPQR  SRPDLGFCVDLSIGRPV GEKE DE+K NQ
Sbjct: 1   MELGLSLGDAPKPFRFVEKQPQVPPPQRGHSRPDLGFCVDLSIGRPVAGEKEGDEDKLNQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
           REDESDGNEDPPIQLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  REDESDGNEDPPIQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYGGGGNISCRRDQ+ENGV NEVGES RASSRASDEDENGCTRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGGGGNISCRRDQMENGVTNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQKLALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKLALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAAST-VAAVATSGGKSTEGVSKRSGFAIAGRPSSSSFPFSAKTQSHQSTA 384
           PSCERVTSTSAAST V+AVA  G KSTEGV+KRSGFAIAGRPSSSSFPFSAKTQSHQSTA
Sbjct: 301 PSCERVTSTSAASTAVSAVAAGGNKSTEGVTKRSGFAIAGRPSSSSFPFSAKTQSHQSTA 334

[Close]

BLAST of CcUC09G166440 vs. NCBI nr
Match: XP_008461247.1 (PREDICTED: homeobox-leucine zipper protein HOX11-like [Cucumis melo] >KAA0058662.1 homeobox-leucine zipper protein HOX11-like [Cucumis melo var. makuwa] >TYK10469.1 homeobox-leucine zipper protein HOX11-like [Cucumis melo var. makuwa])

HSP 1 Score: 557.8 bits (1436), Expect = 7.5e-155
Identity = 303/361 (83.93%), Postives = 311/361 (86.15%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFV+KQ QVP PQR LSR DLGFCVDLSIGR V G+KEDDE+KPNQ
Sbjct: 1   MELGLSLGDAPKPFRFVDKQSQVPSPQRRLSRKDLGFCVDLSIGRSVAGDKEDDEDKPNQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
            EDESDGNEDPP+QLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  GEDESDGNEDPPVQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYG GGNISCRRDQ+ENGVMNEVGES RASSRASDEDENGCTRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGSGGNISCRRDQMENGVMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQKLALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKLALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNS YMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSLYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAI-AGRPSSSSFPFSAKTQSHQSTA 384
           PSCERVTS+SAASTVAA        TEGV+KRSG AI  GRP SSSFPFSAKTQSHQSTA
Sbjct: 301 PSCERVTSSSAASTVAA--------TEGVTKRSGLAIGGGRPGSSSFPFSAKTQSHQSTA 326

[Close]

BLAST of CcUC09G166440 vs. NCBI nr
Match: XP_004135907.1 (homeobox-leucine zipper protein HOX11 [Cucumis sativus] >KGN45166.1 hypothetical protein Csa_015878 [Cucumis sativus])

HSP 1 Score: 551.2 bits (1419), Expect = 7.0e-153
Identity = 302/361 (83.66%), Postives = 308/361 (85.32%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFVEKQ QVP PQR LSR DLGFCVDLSIGR V G+KEDDE+KPNQ
Sbjct: 1   MELGLSLGDAPKPFRFVEKQSQVPSPQRRLSRKDLGFCVDLSIGRSVAGDKEDDEDKPNQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
            EDESDGNEDPP QLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  GEDESDGNEDPPTQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYG GGNIS RRDQ+ENGVMNEVGES RASSRASDEDENGCTRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGSGGNISSRRDQMENGVMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQK ALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKQALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNS YMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSLYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAI-AGRPSSSSFPFSAKTQSHQSTA 384
           PSCERVTS+SAASTVAA        TEGV+KRSG AI  GRP SSSFPFSAKTQSHQSTA
Sbjct: 301 PSCERVTSSSAASTVAA--------TEGVTKRSGLAIGGGRPGSSSFPFSAKTQSHQSTA 326

[Close]

BLAST of CcUC09G166440 vs. NCBI nr
Match: XP_022954327.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita moschata])

HSP 1 Score: 532.7 bits (1371), Expect = 2.6e-147
Identity = 291/350 (83.14%), Postives = 299/350 (85.43%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFVEKQP V P QR +SRPDLGFCVDLSIGRPV GEKEDDEEK NQ
Sbjct: 1   MELGLSLGDAPKPFRFVEKQPPVTPRQRRISRPDLGFCVDLSIGRPVAGEKEDDEEKINQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
           R+ ESDGNEDPPIQLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  RDYESDGNEDPPIQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYGGGGNISC+R+Q+ENGV+    ES RASSRASDEDENG TRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGGGGNISCQREQMENGVI----ESERASSRASDEDENGSTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQKLALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKLALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTT+SFYMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTDSFYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAIAGRPSSSSFPFSA 375
           PSCERVTSTSA S       SGGKSTE VSKRSGFAI GRPSSSSFPFSA
Sbjct: 301 PSCERVTSTSAGS-------SGGKSTEAVSKRSGFAITGRPSSSSFPFSA 312

[Close]

BLAST of CcUC09G166440 vs. NCBI nr
Match: XP_022991918.1 (homeobox-leucine zipper protein HOX11-like [Cucurbita maxima])

HSP 1 Score: 530.8 bits (1366), Expect = 9.8e-147
Identity = 290/350 (82.86%), Postives = 298/350 (85.14%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFVEKQP V P  R +SRPDLGFCVDLSIGRPV GEKEDDEEK NQ
Sbjct: 1   MELGLSLGDAPKPFRFVEKQPPVTPRPRRISRPDLGFCVDLSIGRPVAGEKEDDEEKINQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
           R+ ESDGNEDPPIQLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  RDYESDGNEDPPIQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYGGGGNISC+RDQ+ENGV+    ES RASSRASDEDENG TRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGGGGNISCQRDQMENGVI----ESERASSRASDEDENGSTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQKLALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKLALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKE+QELRALKTT+SFYMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQELRALKTTDSFYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAIAGRPSSSSFPFSA 375
           PSCERVTSTSA S       SGGKSTE VSKRSGFAI GRPSSSSFPFSA
Sbjct: 301 PSCERVTSTSAGS-------SGGKSTEAVSKRSGFAITGRPSSSSFPFSA 312

[Close]

BLAST of CcUC09G166440 vs. ExPASy Swiss-Prot
Match: P46665 (Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 PE=2 SV=3)

HSP 1 Score: 246.1 bits (627), Expect = 6.3e-64
Identity = 167/344 (48.55%), Postives = 203/344 (59.01%), Query Frame = 0


Query: 25  MELGLSLGD-APKPFRFVEKQPQVPPP---QRVLSRPDLGFCVDL--------SIGRPVV 84
           MEL LSLGD   K F F+EK  ++  P       S  DLGFC+ L        S+     
Sbjct: 1   MELALSLGDNTKKQFSFMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGGHRSLSSSSS 60

Query: 85  GEKEDDEEKPNQREDESD-----GNEDPPIQLDL-----LPHNPVPRHLTNPYQGFPWPS 144
              ED+++KP  R  +SD      + DPP+QL L     LP N   R       G     
Sbjct: 61  PSVEDEKKKPAPRAKKSDEFRVSSSVDPPLQLQLHFPNWLPENSKGRQGGRMPLGAATVV 120

Query: 145 SENDEGEDRTAS-----PNSAASSFQMEFGLYGGGGNISCRRDQIENGVMNEVGESGRAS 204
            E +E E+   S     P+S  SSFQ++FG+   G      R   +  + +EV  S   +
Sbjct: 121 EEEEEEEEAVPSMSVSPPDSVTSSFQLDFGIKSYG----YERRSNKRDIDDEVERSASRA 180

Query: 205 SRASDEDENGCTRKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSD 264
           S   ++DENG TRKKLRLSK+QSAFLE+SFKEH+TLNP                      
Sbjct: 181 SNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNP---------------------- 240

Query: 265 LNRLQKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQ 324
                KQK+ALAKQLNL PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCE+LTEENRRLQ
Sbjct: 241 -----KQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQ 300

Query: 325 KELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTSAASTVAA 342
           KE++ELR LKT+  FYMQLPATTLTMCPSCERV +++A  + +A
Sbjct: 301 KEVKELRTLKTSTPFYMQLPATTLTMCPSCERVATSAAQPSTSA 313

[Close]

BLAST of CcUC09G166440 vs. ExPASy Swiss-Prot
Match: A2Z1U1 (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 221.1 bits (562), Expect = 2.2e-56
Identity = 152/278 (54.68%), Postives = 172/278 (61.87%), Query Frame = 0


Query: 128 GEDRTASPNSAASSFQM-EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDEN 187
           G   ++SPN++A SF M +F  +G GGN     D    G     G   R+ SRASDED+ 
Sbjct: 36  GAALSSSPNNSAGSFPMDDFSGHGLGGN-----DAAPGG-----GGGDRSCSRASDEDDG 95

Query: 188 GCTRKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKL 247
           G  RKKLRLSKEQSAFLEESFKEH+TLNP                           KQKL
Sbjct: 96  GSARKKLRLSKEQSAFLEESFKEHSTLNP---------------------------KQKL 155

Query: 248 ALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRAL 307
           ALAKQLNL PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEL ELRAL
Sbjct: 156 ALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELAELRAL 215

Query: 308 KTTNSFYMQLPATTLTMCPSCERVTSTSAASTVAAVATS------GGKSTEGVSKRSGFA 367
           KT + FYM LPATTL+MCPSCERV S SA +T ++ ATS         S+ G++  S  +
Sbjct: 216 KTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATSSTAAPPAAPSSGGIAATSSSS 275

Query: 368 IAG------RPSS--------SSFPFSAKTQSHQSTAS 385
            A       RPSS          FP S   Q+   T+S
Sbjct: 276 AAAAAAPDHRPSSFAALFSSPRGFPLSVAPQAQPPTSS 276

[Close]

BLAST of CcUC09G166440 vs. ExPASy Swiss-Prot
Match: Q67UE2 (Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX11 PE=2 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 3.7e-56
Identity = 184/418 (44.02%), Postives = 217/418 (51.91%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLG+A                   ++       + L +GR     +    +   +
Sbjct: 1   MELGLSLGEA-------------------MADAGRELVLGLGMGRREEAAEAGRRDHEVR 60

Query: 85  REDE--------SDGNEDPPIQLDLLPHNP--------------VPRHLTNPYQGFPW-- 144
           RE E           + +P ++L LLP  P                RHL    +GF    
Sbjct: 61  RELEFGSMSSRCGGSSPEPTVRLTLLPMVPGLGLPWPPPPPPSSESRHLEASTRGFDVNR 120

Query: 145 -PSS-----------ENDE--GEDRTASPNSAASSFQM-EFGLYGGGGNISCRRDQIENG 204
            PSS           E D+  G   ++SPN++A SF M +F  +G GGN     D    G
Sbjct: 121 PPSSGGGGGGGGAEEEQDDVAGAALSSSPNNSAGSFPMDDFSGHGLGGN-----DAAPGG 180

Query: 205 VMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNP 264
                G   R+ SRASDED+ G  RKKLRLSKEQSAFLEESFKEH+TLNP          
Sbjct: 181 -----GGGDRSCSRASDEDDGGSARKKLRLSKEQSAFLEESFKEHSTLNP---------- 240

Query: 265 AIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRC 324
                            KQKLALAKQLNL PRQVEVWFQNRRARTKLKQTEVDCEYLKRC
Sbjct: 241 -----------------KQKLALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRC 300

Query: 325 CETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTSAASTVAAVATS 384
           CETLTEENRRLQKEL ELRALKT + FYM LPATTL+MCPSCERV S SA +T ++ ATS
Sbjct: 301 CETLTEENRRLQKELAELRALKTVHPFYMHLPATTLSMCPSCERVASNSAPATASSAATS 360

[Close]

BLAST of CcUC09G166440 vs. ExPASy Swiss-Prot
Match: A2YW03 (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=HOX27 PE=2 SV=2)

HSP 1 Score: 205.3 bits (521), Expect = 1.2e-51
Identity = 167/382 (43.72%), Postives = 199/382 (52.09%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDA                  V     L   + L +G    G +  +EE+  +
Sbjct: 1   MELGLSLGDA----------------VTVADGGRLELVLGLGVG-VGAGVRRGEEEERGR 60

Query: 85  RED---------ESDGNEDPPIQLDLLP----HNPVPRHLTN-----------PYQGFPW 144
           RED          +  + +P ++L L+     H P     +            P      
Sbjct: 61  REDVVGAGRWAAMAAASPEPSVRLSLVSSLGLHWPSETGRSEAAARGFDVNRAPSVAAGA 120

Query: 145 PSSENDE-----GEDRTASPNSAASSFQMEFGLYGGGGNISCRRDQIENGVMNEVGESGR 204
           P  E+DE         ++SPN +  SF ++   +G  G+          G     G   R
Sbjct: 121 PGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGHGLRGHAEAAAQGGGGG-----GGGER 180

Query: 205 ASSRASDEDENGCTRKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISD 264
           +SSRASD+DE    RKKLRLSKEQSAFLEESFKEH+TLNP                    
Sbjct: 181 SSSRASDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNP-------------------- 240

Query: 265 SDLNRLQKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRR 324
                  KQK+ALAKQLNL PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRR
Sbjct: 241 -------KQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRR 300

Query: 325 LQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTSA-ASTVAAVATSGGKSTEGVS 375
           L KEL ELRALKT   FYM LPATTL+MCPSCERV S  A AST A  A +   +    +
Sbjct: 301 LHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTAA 333

[Close]

BLAST of CcUC09G166440 vs. ExPASy Swiss-Prot
Match: Q6YPD0 (Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 GN=HOX27 PE=2 SV=1)

HSP 1 Score: 204.1 bits (518), Expect = 2.8e-51
Identity = 167/382 (43.72%), Postives = 198/382 (51.83%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDA                  V     L   + L +G    G +  +EE+  +
Sbjct: 1   MELGLSLGDA----------------VTVADGGRLELVLGLGVG-VGAGVRRGEEEERGR 60

Query: 85  RED---------ESDGNEDPPIQLDLLP----HNPVPRHLTN-----------PYQGFPW 144
           RED          +  + +P ++L L+     H P     +            P      
Sbjct: 61  REDVVGAGRWAAMAAASPEPSVRLSLVSSLGLHWPSETGRSEAAARGFDVNRAPSVAAGA 120

Query: 145 PSSENDE-----GEDRTASPNSAASSFQMEFGLYGGGGNISCRRDQIENGVMNEVGESGR 204
           P  E+DE         ++SPN +  SF ++    G  G+          G     G   R
Sbjct: 121 PGMEDDEEGPGAAPALSSSPNDSGGSFPLDLSGQGLRGHAEAAAQGGGGG-----GGGER 180

Query: 205 ASSRASDEDENGCTRKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISD 264
           +SSRASD+DE    RKKLRLSKEQSAFLEESFKEH+TLNP                    
Sbjct: 181 SSSRASDDDEGASARKKLRLSKEQSAFLEESFKEHSTLNP-------------------- 240

Query: 265 SDLNRLQKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRR 324
                  KQK+ALAKQLNL PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRR
Sbjct: 241 -------KQKVALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRR 300

Query: 325 LQKELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTSA-ASTVAAVATSGGKSTEGVS 375
           L KEL ELRALKT   FYM LPATTL+MCPSCERV S  A AST A  A +   +    +
Sbjct: 301 LHKELAELRALKTARPFYMHLPATTLSMCPSCERVASNPATASTSAPAAATSPAAAPTAA 333

[Close]

BLAST of CcUC09G166440 vs. ExPASy TrEMBL
Match: A0A5D3CJS2 (Homeobox-leucine zipper protein HOX11-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold459G001180 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.6e-155
Identity = 303/361 (83.93%), Postives = 311/361 (86.15%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFV+KQ QVP PQR LSR DLGFCVDLSIGR V G+KEDDE+KPNQ
Sbjct: 1   MELGLSLGDAPKPFRFVDKQSQVPSPQRRLSRKDLGFCVDLSIGRSVAGDKEDDEDKPNQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
            EDESDGNEDPP+QLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  GEDESDGNEDPPVQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYG GGNISCRRDQ+ENGVMNEVGES RASSRASDEDENGCTRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGSGGNISCRRDQMENGVMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQKLALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKLALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNS YMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSLYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAI-AGRPSSSSFPFSAKTQSHQSTA 384
           PSCERVTS+SAASTVAA        TEGV+KRSG AI  GRP SSSFPFSAKTQSHQSTA
Sbjct: 301 PSCERVTSSSAASTVAA--------TEGVTKRSGLAIGGGRPGSSSFPFSAKTQSHQSTA 326

[Close]

BLAST of CcUC09G166440 vs. ExPASy TrEMBL
Match: A0A1S3CEP0 (homeobox-leucine zipper protein HOX11-like OS=Cucumis melo OX=3656 GN=LOC103499889 PE=4 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 3.6e-155
Identity = 303/361 (83.93%), Postives = 311/361 (86.15%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFV+KQ QVP PQR LSR DLGFCVDLSIGR V G+KEDDE+KPNQ
Sbjct: 1   MELGLSLGDAPKPFRFVDKQSQVPSPQRRLSRKDLGFCVDLSIGRSVAGDKEDDEDKPNQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
            EDESDGNEDPP+QLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  GEDESDGNEDPPVQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYG GGNISCRRDQ+ENGVMNEVGES RASSRASDEDENGCTRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGSGGNISCRRDQMENGVMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQKLALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKLALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNS YMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSLYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAI-AGRPSSSSFPFSAKTQSHQSTA 384
           PSCERVTS+SAASTVAA        TEGV+KRSG AI  GRP SSSFPFSAKTQSHQSTA
Sbjct: 301 PSCERVTSSSAASTVAA--------TEGVTKRSGLAIGGGRPGSSSFPFSAKTQSHQSTA 326

[Close]

BLAST of CcUC09G166440 vs. ExPASy TrEMBL
Match: A0A0A0KBJ3 (Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G429520 PE=4 SV=1)

HSP 1 Score: 551.2 bits (1419), Expect = 3.4e-153
Identity = 302/361 (83.66%), Postives = 308/361 (85.32%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFVEKQ QVP PQR LSR DLGFCVDLSIGR V G+KEDDE+KPNQ
Sbjct: 1   MELGLSLGDAPKPFRFVEKQSQVPSPQRRLSRKDLGFCVDLSIGRSVAGDKEDDEDKPNQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
            EDESDGNEDPP QLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  GEDESDGNEDPPTQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYG GGNIS RRDQ+ENGVMNEVGES RASSRASDEDENGCTRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGSGGNISSRRDQMENGVMNEVGESERASSRASDEDENGCTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQK ALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKQALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNS YMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSLYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAI-AGRPSSSSFPFSAKTQSHQSTA 384
           PSCERVTS+SAASTVAA        TEGV+KRSG AI  GRP SSSFPFSAKTQSHQSTA
Sbjct: 301 PSCERVTSSSAASTVAA--------TEGVTKRSGLAIGGGRPGSSSFPFSAKTQSHQSTA 326

[Close]

BLAST of CcUC09G166440 vs. ExPASy TrEMBL
Match: A0A6J1GQQ3 (homeobox-leucine zipper protein HOX11-like OS=Cucurbita moschata OX=3662 GN=LOC111456605 PE=4 SV=1)

HSP 1 Score: 532.7 bits (1371), Expect = 1.3e-147
Identity = 291/350 (83.14%), Postives = 299/350 (85.43%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFVEKQP V P QR +SRPDLGFCVDLSIGRPV GEKEDDEEK NQ
Sbjct: 1   MELGLSLGDAPKPFRFVEKQPPVTPRQRRISRPDLGFCVDLSIGRPVAGEKEDDEEKINQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
           R+ ESDGNEDPPIQLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  RDYESDGNEDPPIQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYGGGGNISC+R+Q+ENGV+    ES RASSRASDEDENG TRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGGGGNISCQREQMENGVI----ESERASSRASDEDENGSTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQKLALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKLALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTT+SFYMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTDSFYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAIAGRPSSSSFPFSA 375
           PSCERVTSTSA S       SGGKSTE VSKRSGFAI GRPSSSSFPFSA
Sbjct: 301 PSCERVTSTSAGS-------SGGKSTEAVSKRSGFAITGRPSSSSFPFSA 312

[Close]

BLAST of CcUC09G166440 vs. ExPASy TrEMBL
Match: A0A6J1JXM6 (homeobox-leucine zipper protein HOX11-like OS=Cucurbita maxima OX=3661 GN=LOC111488413 PE=4 SV=1)

HSP 1 Score: 530.8 bits (1366), Expect = 4.8e-147
Identity = 290/350 (82.86%), Postives = 298/350 (85.14%), Query Frame = 0


Query: 25  MELGLSLGDAPKPFRFVEKQPQVPPPQRVLSRPDLGFCVDLSIGRPVVGEKEDDEEKPNQ 84
           MELGLSLGDAPKPFRFVEKQP V P  R +SRPDLGFCVDLSIGRPV GEKEDDEEK NQ
Sbjct: 1   MELGLSLGDAPKPFRFVEKQPPVTPRPRRISRPDLGFCVDLSIGRPVAGEKEDDEEKINQ 60

Query: 85  REDESDGNEDPPIQLDLLPHNPVPRHLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 144
           R+ ESDGNEDPPIQLDLLPHNPVPR+LTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM
Sbjct: 61  RDYESDGNEDPPIQLDLLPHNPVPRNLTNPYQGFPWPSSENDEGEDRTASPNSAASSFQM 120

Query: 145 EFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDENGCTRKKLRLSKEQSAFLE 204
           EFGLYGGGGNISC+RDQ+ENGV+    ES RASSRASDEDENG TRKKLRLSKEQSAFLE
Sbjct: 121 EFGLYGGGGNISCQRDQMENGVI----ESERASSRASDEDENGSTRKKLRLSKEQSAFLE 180

Query: 205 ESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAKQLNLLPRQVEVWFQ 264
           ESFKEHNTLNP                           KQKLALAKQLNL PRQVEVWFQ
Sbjct: 181 ESFKEHNTLNP---------------------------KQKLALAKQLNLRPRQVEVWFQ 240

Query: 265 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTNSFYMQLPATTLTMC 324
           NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKE+QELRALKTT+SFYMQLPATTLTMC
Sbjct: 241 NRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKEVQELRALKTTDSFYMQLPATTLTMC 300

Query: 325 PSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGFAIAGRPSSSSFPFSA 375
           PSCERVTSTSA S       SGGKSTE VSKRSGFAI GRPSSSSFPFSA
Sbjct: 301 PSCERVTSTSAGS-------SGGKSTEAVSKRSGFAITGRPSSSSFPFSA 312

[Close]

BLAST of CcUC09G166440 vs. TAIR 10
Match: AT5G06710.1 (homeobox from Arabidopsis thaliana )

HSP 1 Score: 246.1 bits (627), Expect = 4.5e-65
Identity = 167/344 (48.55%), Postives = 203/344 (59.01%), Query Frame = 0


Query: 25  MELGLSLGD-APKPFRFVEKQPQVPPP---QRVLSRPDLGFCVDL--------SIGRPVV 84
           MEL LSLGD   K F F+EK  ++  P       S  DLGFC+ L        S+     
Sbjct: 1   MELALSLGDNTKKQFSFMEKNSKINNPSVSSTSTSEKDLGFCMALDVAFGGHRSLSSSSS 60

Query: 85  GEKEDDEEKPNQREDESD-----GNEDPPIQLDL-----LPHNPVPRHLTNPYQGFPWPS 144
              ED+++KP  R  +SD      + DPP+QL L     LP N   R       G     
Sbjct: 61  PSVEDEKKKPAPRAKKSDEFRVSSSVDPPLQLQLHFPNWLPENSKGRQGGRMPLGAATVV 120

Query: 145 SENDEGEDRTAS-----PNSAASSFQMEFGLYGGGGNISCRRDQIENGVMNEVGESGRAS 204
            E +E E+   S     P+S  SSFQ++FG+   G      R   +  + +EV  S   +
Sbjct: 121 EEEEEEEEAVPSMSVSPPDSVTSSFQLDFGIKSYG----YERRSNKRDIDDEVERSASRA 180

Query: 205 SRASDEDENGCTRKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSD 264
           S   ++DENG TRKKLRLSK+QSAFLE+SFKEH+TLNP                      
Sbjct: 181 SNEDNDDENGSTRKKLRLSKDQSAFLEDSFKEHSTLNP---------------------- 240

Query: 265 LNRLQKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQ 324
                KQK+ALAKQLNL PRQVEVWFQNRRARTKLKQTEVDCEYLKRCCE+LTEENRRLQ
Sbjct: 241 -----KQKIALAKQLNLRPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCESLTEENRRLQ 300

Query: 325 KELQELRALKTTNSFYMQLPATTLTMCPSCERVTSTSAASTVAA 342
           KE++ELR LKT+  FYMQLPATTLTMCPSCERV +++A  + +A
Sbjct: 301 KEVKELRTLKTSTPFYMQLPATTLTMCPSCERVATSAAQPSTSA 313

[Close]

BLAST of CcUC09G166440 vs. TAIR 10
Match: AT5G47370.1 (Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein )

HSP 1 Score: 176.0 bits (445), Expect = 5.7e-44
Identity = 129/269 (47.96%), Postives = 151/269 (56.13%), Query Frame = 0


Query: 96  PIQLDLLPHNPVPRHLTNPYQGFPW------------------PSSENDEGEDRTASPNS 155
           P+Q++L P++     L+N  Q  PW                  PS+ N E +   +SPNS
Sbjct: 22  PLQMNLNPNS----SLSNNLQRLPWNQTFDPTSDLRKIDVNSFPSTVNCEEDTGVSSPNS 81

Query: 156 AASSF-----QMEFGLYGGGGNISCRRDQIENGVMNEVGESGRASSR-ASDEDENG--CT 215
             SS          G+ G G       D+I            R  SR  SDE+E+G   +
Sbjct: 82  TISSTISGKRSEREGISGTGVGSGDDHDEI---------TPDRGYSRGTSDEEEDGGETS 141

Query: 216 RKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALA 275
           RKKLRLSK+QSAFLEE+FKEHNTLNP                           KQKLALA
Sbjct: 142 RKKLRLSKDQSAFLEETFKEHNTLNP---------------------------KQKLALA 201

Query: 276 KQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTT 335
           K+LNL  RQVEVWFQNRRARTKLKQTEVDCEYLKRC E LTEENRRLQKE  ELR LK +
Sbjct: 202 KKLNLTARQVEVWFQNRRARTKLKQTEVDCEYLKRCVEKLTEENRRLQKEAMELRTLKLS 250

Query: 336 NSFYMQL-PATTLTMCPSCERVTSTSAAS 338
             FY Q+ P TTL MCPSCERV   S+++
Sbjct: 262 PQFYGQMTPPTTLIMCPSCERVGGPSSSN 250

[Close]

BLAST of CcUC09G166440 vs. TAIR 10
Match: AT2G44910.1 (homeobox-leucine zipper protein 4 )

HSP 1 Score: 175.6 bits (444), Expect = 7.5e-44
Identity = 116/216 (53.70%), Postives = 134/216 (62.04%), Query Frame = 0


Query: 133 ASPNSAASSFQMEFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDED--ENGCTR 192
           +SPNSA SS      L G   +++  R   EN         G  S  + DED      +R
Sbjct: 109 SSPNSAVSS------LSGNKRDLAVARGGDENEAERASCSRGGGSGGSDDEDGGNGDGSR 168

Query: 193 KKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQKLALAK 252
           KKLRLSK+Q+  LEE+FKEH+TLNP                           KQKLALAK
Sbjct: 169 KKLRLSKDQALVLEETFKEHSTLNP---------------------------KQKLALAK 228

Query: 253 QLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRALKTTN 312
           QLNL  RQVEVWFQNRRARTKLKQTEVDCEYLKRCC+ LTEENRRLQKE+ ELRALK + 
Sbjct: 229 QLNLRARQVEVWFQNRRARTKLKQTEVDCEYLKRCCDNLTEENRRLQKEVSELRALKLSP 288

Query: 313 SFYMQL-PATTLTMCPSCERVTSTSAASTVAAVATS 346
             YM + P TTLTMCPSCERV+S++A  T A   T+
Sbjct: 289 HLYMHMTPPTTLTMCPSCERVSSSAATVTAAPSTTT 291

[Close]

BLAST of CcUC09G166440 vs. TAIR 10
Match: AT3G60390.1 (homeobox-leucine zipper protein 3 )

HSP 1 Score: 169.5 bits (428), Expect = 5.4e-42
Identity = 122/251 (48.61%), Postives = 146/251 (58.17%), Query Frame = 0


Query: 126 DEGEDRTASPNSAASSF----QMEFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRAS 185
           DEG    +SPNS  SS     + E  L    G +   R  +E+  +     S    S   
Sbjct: 94  DEGAG-VSSPNSTVSSVMSGKKSERELMAAAGAVGGGR--VEDNEIERASCSLGGGSDDE 153

Query: 186 DEDENG--CTRKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLN 245
           D   NG   +RKKLRLSKEQ+  LEE+FKEH+TLNP                        
Sbjct: 154 DGSGNGDDSSRKKLRLSKEQALVLEETFKEHSTLNP------------------------ 213

Query: 246 RLQKQKLALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKE 305
              KQK+ALAKQLNL  RQVEVWFQNRRARTKLKQTEVDCEYLKRCCE LT+ENRRLQKE
Sbjct: 214 ---KQKMALAKQLNLRTRQVEVWFQNRRARTKLKQTEVDCEYLKRCCENLTDENRRLQKE 273

Query: 306 LQELRALKTTNSFYMQL-PATTLTMCPSCERVTSTSAASTVAAVATSGGKSTEGVSKRSG 365
           + ELRALK +   YM + P TTLTMCPSCERV  TS++S+VA    +       +S  + 
Sbjct: 274 VSELRALKLSPHLYMHMKPPTTLTMCPSCERVAVTSSSSSVAPPVMNSSSPMGPMSPWAA 314

Query: 366 FAIAGRPSSSS 370
             +  RP++ S
Sbjct: 334 MPLRQRPAAGS 314

[Close]

BLAST of CcUC09G166440 vs. TAIR 10
Match: AT4G37790.1 (Homeobox-leucine zipper protein family )

HSP 1 Score: 166.8 bits (421), Expect = 3.5e-41
Identity = 110/234 (47.01%), Postives = 134/234 (57.26%), Query Frame = 0


Query: 131 RTASPNSAASSF-----QMEFGLYGGGGNISCRRDQIENGVMNEVGESGRASSRASDEDE 190
           R  S +S  SSF     + E  + GG G      +  E  V + V +         D++E
Sbjct: 69  RQTSSHSGISSFSSGRVKREREISGGDGEEEA-EETTERVVCSRVSDD-------HDDEE 128

Query: 191 NGCTRKKLRLSKEQSAFLEESFKEHNTLNPVSSKFQKKNPAIDSLDVISDSDLNRLQKQK 250
               RKKLRL+K+QSA LE++FK H+TLNP                           KQK
Sbjct: 129 GVSARKKLRLTKQQSALLEDNFKLHSTLNP---------------------------KQK 188

Query: 251 LALAKQLNLLPRQVEVWFQNRRARTKLKQTEVDCEYLKRCCETLTEENRRLQKELQELRA 310
            ALA+QLNL PRQVEVWFQNRRARTKLKQTEVDCE+LK+CCETLT+ENRRLQKELQ+L+A
Sbjct: 189 QALARQLNLRPRQVEVWFQNRRARTKLKQTEVDCEFLKKCCETLTDENRRLQKELQDLKA 248

Query: 311 LKTTNSFYMQLPATTLTMCPSCERVTSTSAASTVAAVATSGGKSTEGVSKRSGF 360
           LK +  FYM +PA TLTMCPSCER+          AV     K    +  +  F
Sbjct: 249 LKLSQPFYMHMPAATLTMCPSCERLGGGGVGGDTTAVDEETAKGAFSIVTKPRF 267

The following BLAST results are available for this feature:

BLAST of CcUC09G166440 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038896826.1	5.2e-164	87.81	homeobox-leucine zipper protein HOX11-like [Benincasa hispida]	[more]
XP_008461247.1	7.5e-155	83.93	PREDICTED: homeobox-leucine zipper protein HOX11-like [Cucumis melo] >KAA0058662...	[more]
XP_004135907.1	7.0e-153	83.66	homeobox-leucine zipper protein HOX11 [Cucumis sativus] >KGN45166.1 hypothetical...	[more]
XP_022954327.1	2.6e-147	83.14	homeobox-leucine zipper protein HOX11-like [Cucurbita moschata]	[more]
XP_022991918.1	9.8e-147	82.86	homeobox-leucine zipper protein HOX11-like [Cucurbita maxima]	[more]

BLAST of CcUC09G166440 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P46665	6.3e-64	48.55	Homeobox-leucine zipper protein HAT14 OS=Arabidopsis thaliana OX=3702 GN=HAT14 P...	[more]
A2Z1U1	2.2e-56	54.68	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q67UE2	3.7e-56	44.02	Homeobox-leucine zipper protein HOX11 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]
A2YW03	1.2e-51	43.72	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. indica OX=39946 GN=...	[more]
Q6YPD0	2.8e-51	43.72	Homeobox-leucine zipper protein HOX27 OS=Oryza sativa subsp. japonica OX=39947 G...	[more]

BLAST of CcUC09G166440 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CJS2	3.6e-155	83.93	Homeobox-leucine zipper protein HOX11-like OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CEP0	3.6e-155	83.93	homeobox-leucine zipper protein HOX11-like OS=Cucumis melo OX=3656 GN=LOC1034998...	[more]
A0A0A0KBJ3	3.4e-153	83.66	Homeobox domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G429520 PE...	[more]
A0A6J1GQQ3	1.3e-147	83.14	homeobox-leucine zipper protein HOX11-like OS=Cucurbita moschata OX=3662 GN=LOC1...	[more]
A0A6J1JXM6	4.8e-147	82.86	homeobox-leucine zipper protein HOX11-like OS=Cucurbita maxima OX=3661 GN=LOC111...	[more]

BLAST of CcUC09G166440 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06710.1	4.5e-65	48.55	homeobox from Arabidopsis thaliana	[more]
AT5G47370.1	5.7e-44	47.96	Homeobox-leucine zipper protein 4 (HB-4) / HD-ZIP protein	[more]
AT2G44910.1	7.5e-44	53.70	homeobox-leucine zipper protein 4	[more]
AT3G60390.1	5.4e-42	48.61	homeobox-leucine zipper protein 3	[more]
AT4G37790.1	3.5e-41	47.01	Homeobox-leucine zipper protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 279..309
None	No IPR available	GENE3D	1.10.10.60		coord: 194..271 e-value: 1.1E-14 score: 55.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 170..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 176..190
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 343..384
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 361..384
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 70..92
None	No IPR available	PANTHER	PTHR45714	FAMILY NOT NAMED	coord: 243..350 coord: 25..215
None	No IPR available	PANTHER	PTHR45714:SF15	HOMEOBOX-LEUCINE ZIPPER PROTEIN HAT14	coord: 243..350 coord: 25..215
None	No IPR available	CDD	cd14686	bZIP	coord: 266..305 e-value: 0.00722622 score: 32.5173
IPR003106	Leucine zipper, homeobox-associated	SMART	SM00340	halz	coord: 273..316 e-value: 5.6E-25 score: 99.0
IPR003106	Leucine zipper, homeobox-associated	PFAM	PF02183	HALZ	coord: 273..307 e-value: 2.0E-10 score: 40.7
IPR001356	Homeobox domain	SMART	SM00389	HOX_1	coord: 188..277 e-value: 8.1E-9 score: 45.3
IPR001356	Homeobox domain	PFAM	PF00046	Homeodomain	coord: 243..271 e-value: 1.4E-8 score: 34.5
IPR001356	Homeobox domain	PROSITE	PS50071	HOMEOBOX_2	coord: 186..273 score: 12.001141
IPR001356	Homeobox domain	CDD	cd00086	homeodomain	coord: 190..274 e-value: 1.06477E-10 score: 54.9421
IPR017970	Homeobox, conserved site	PROSITE	PS00027	HOMEOBOX_1	coord: 248..271
IPR009057	Homeobox-like domain superfamily	SUPERFAMILY	46689	Homeodomain-like	coord: 243..282

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC09G166440.1	CcUC09G166440.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0043565	sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding