CcUC09G165730 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGTTTCTCCAGCAAATCACGATTACATTCTCCTCCTGCTAGAAATTCTTGGGGATTATCCTCAGGCTTTGAGGAAAGATGGGTTAGTCAAGTTCGTCAATCCATAGATGAAGAAGAGCTCGAGGAAGACATAGGATTTCCAGTATGCATATGTACTGTCCCTAAGTCTCTTATGGCCATTAATCCTGAATCCTATACTCCACAGGAAGTCGCAATTGGTCCATACCATCACTGGCGCCAAGAGCTGTATGTGATGGAGAGGTACAAGATTGCTGCAGCCAAAAAAGCTCAAAAACAGCTCCAAGGCCTCAAGTTTCACAATCTTGTTGAGAAATTGACTATGTACGAGGAAAAGACCCGGGTGTACTATCACAATACCTCAATTTCAATAGTGAAACATTTGCTTGGATGA ATGAGTTTCTCCAGCAAATCACGATTACATTCTCCTCCTGCTAGAAATTCTTGGGGATTATCCTCAGGCTTTGAGGAAAGATGGGTTAGTCAAGTTCGTCAATCCATAGATGAAGAAGAGCTCGAGGAAGACATAGGATTTCCAGTATGCATATGTACTGTCCCTAAGTCTCTTATGGCCATTAATCCTGAATCCTATACTCCACAGGAAGTCGCAATTGGTCCATACCATCACTGGCGCCAAGAGCTGTATGTGATGGAGAGGTACAAGATTGCTGCAGCCAAAAAAGCTCAAAAACAGCTCCAAGGCCTCAAGTTTCACAATCTTGTTGAGAAATTGACTATGTACGAGGAAAAGACCCGGGTGTACTATCACAATACCTCAATTTCAATAGTGAAACATTTGCTTGGATGA ATGAGTTTCTCCAGCAAATCACGATTACATTCTCCTCCTGCTAGAAATTCTTGGGGATTATCCTCAGGCTTTGAGGAAAGATGGGTTAGTCAAGTTCGTCAATCCATAGATGAAGAAGAGCTCGAGGAAGACATAGGATTTCCAGTATGCATATGTACTGTCCCTAAGTCTCTTATGGCCATTAATCCTGAATCCTATACTCCACAGGAAGTCGCAATTGGTCCATACCATCACTGGCGCCAAGAGCTGTATGTGATGGAGAGGTACAAGATTGCTGCAGCCAAAAAAGCTCAAAAACAGCTCCAAGGCCTCAAGTTTCACAATCTTGTTGAGAAATTGACTATGTACGAGGAAAAGACCCGGGTGTACTATCACAATACCTCAATTTCAATAGTGAAACATTTGCTTGGATGA MSFSSKSRLHSPPARNSWGLSSGFEERWVSQVRQSIDEEELEEDIGFPVCICTVPKSLMAINPESYTPQEVAIGPYHHWRQELYVMERYKIAAAKKAQKQLQGLKFHNLVEKLTMYEEKTRVYYHNTSISIVKHLLG Homology
BLAST of CcUC09G165730 vs. NCBI nr
Match: XP_038899461.1 (LOW QUALITY PROTEIN: putative UPF0481 protein At3g02645 [Benincasa hispida]) HSP 1 Score: 220.7 bits (561), Expect = 7.8e-54 Identity = 109/125 (87.20%), Postives = 114/125 (91.20%), Query Frame = 0
BLAST of CcUC09G165730 vs. NCBI nr
Match: XP_004136095.1 (putative UPF0481 protein At3g02645 [Cucumis sativus] >XP_011659517.1 putative UPF0481 protein At3g02645 [Cucumis sativus] >XP_031745026.1 putative UPF0481 protein At3g02645 [Cucumis sativus] >KGN45239.1 hypothetical protein Csa_015617 [Cucumis sativus]) HSP 1 Score: 210.7 bits (535), Expect = 8.0e-51 Identity = 100/125 (80.00%), Postives = 111/125 (88.80%), Query Frame = 0
BLAST of CcUC09G165730 vs. NCBI nr
Match: XP_008461155.1 (PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo] >XP_008461156.1 PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo] >XP_016902665.1 PREDICTED: putative UPF0481 protein At3g02645 [Cucumis melo]) HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50 Identity = 104/126 (82.54%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of CcUC09G165730 vs. NCBI nr
Match: KAA0058728.1 (putative UPF0481 protein [Cucumis melo var. makuwa]) HSP 1 Score: 210.3 bits (534), Expect = 1.0e-50 Identity = 104/126 (82.54%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of CcUC09G165730 vs. NCBI nr
Match: KAA0058730.1 (putative UPF0481 protein [Cucumis melo var. makuwa]) HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49 Identity = 99/125 (79.20%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of CcUC09G165730 vs. ExPASy Swiss-Prot
Match: P0C897 (Putative UPF0481 protein At3g02645 OS=Arabidopsis thaliana OX=3702 GN=At3g02645 PE=3 SV=1) HSP 1 Score: 94.7 bits (234), Expect = 8.4e-19 Identity = 50/102 (49.02%), Postives = 65/102 (63.73%), Query Frame = 0
BLAST of CcUC09G165730 vs. ExPASy Swiss-Prot
Match: Q9SD53 (UPF0481 protein At3g47200 OS=Arabidopsis thaliana OX=3702 GN=At3g47200 PE=2 SV=1) HSP 1 Score: 47.8 bits (112), Expect = 1.2e-04 Identity = 31/89 (34.83%), Postives = 53/89 (59.55%), Query Frame = 0
BLAST of CcUC09G165730 vs. ExPASy TrEMBL
Match: A0A0A0K8N9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G432200 PE=4 SV=1) HSP 1 Score: 210.7 bits (535), Expect = 3.9e-51 Identity = 100/125 (80.00%), Postives = 111/125 (88.80%), Query Frame = 0
BLAST of CcUC09G165730 vs. ExPASy TrEMBL
Match: A0A1S3CDL4 (putative UPF0481 protein At3g02645 OS=Cucumis melo OX=3656 GN=LOC103499824 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 5.1e-51 Identity = 104/126 (82.54%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of CcUC09G165730 vs. ExPASy TrEMBL
Match: A0A5A7UU59 (Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G001980 PE=4 SV=1) HSP 1 Score: 210.3 bits (534), Expect = 5.1e-51 Identity = 104/126 (82.54%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of CcUC09G165730 vs. ExPASy TrEMBL
Match: A0A5A7UUK5 (Putative UPF0481 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold339G002000 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 5.6e-50 Identity = 99/125 (79.20%), Postives = 106/125 (84.80%), Query Frame = 0
BLAST of CcUC09G165730 vs. ExPASy TrEMBL
Match: A0A1S4E348 (putative UPF0481 protein At3g02645 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499825 PE=4 SV=1) HSP 1 Score: 206.8 bits (525), Expect = 5.6e-50 Identity = 99/125 (79.20%), Postives = 107/125 (85.60%), Query Frame = 0
BLAST of CcUC09G165730 vs. TAIR 10
Match: AT3G02645.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 94.7 bits (234), Expect = 6.0e-20 Identity = 50/102 (49.02%), Postives = 65/102 (63.73%), Query Frame = 0
BLAST of CcUC09G165730 vs. TAIR 10
Match: AT3G50170.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 58.9 bits (141), Expect = 3.6e-09 Identity = 34/101 (33.66%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of CcUC09G165730 vs. TAIR 10
Match: AT3G50170.2 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 58.9 bits (141), Expect = 3.6e-09 Identity = 34/101 (33.66%), Postives = 54/101 (53.47%), Query Frame = 0
BLAST of CcUC09G165730 vs. TAIR 10
Match: AT3G50120.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 56.2 bits (134), Expect = 2.4e-08 Identity = 32/100 (32.00%), Postives = 55/100 (55.00%), Query Frame = 0
BLAST of CcUC09G165730 vs. TAIR 10
Match: AT3G47210.1 (Plant protein of unknown function (DUF247) ) HSP 1 Score: 52.8 bits (125), Expect = 2.6e-07 Identity = 21/42 (50.00%), Postives = 32/42 (76.19%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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