CcUC09G163190 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCCCATCAATCACCACCAACACTTCTCCAAATCCACCTCCGCCGCCGTCACAACCACCACTTCCTCCAACACCACCACCCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCCTTCTCGCCCCTTATTTCCCTCACGATCGTCAACGTCAATTCCTAAACGCTCATAAACTCTTCGGCGTTAGCAATATCACTAAAATCATTAAGAATCTCGATCCGTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTTCGATCCGTCGATCCTGTTGGCGGTTGTTACCGGATTATTCGAGACCTTCAACGCCAAATTGAATATAGCAAGGCGGAGCTTGAGATCGTGCTTCATCAATTGGCTATTTGTAAACAGCAGGCCGCTGCTGCTGCGGCGGCTGCGGCTATTCTTGAGGCGGATCCGATGAGTGGATACGGCGGAATTGAGCATCAATTTGTGGAAGGGTATGAAGGGGAAGGGTTTGTAGTTGGGGAAAATGAGAAAGGGGAAAGTTTGGAAGATCGGGACGTGGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCATTACAATTGAAACAAGCCGGCTCTGTTCATGATTTTCACGATATCAAGATCGATACAAATAATAATCACCTTCAACAACAACTTAAATTTCAACACGATCATCATCCTGATCTGGTTCATCAGAGGTTAGTATGATTTCCCACCCACCCACCAACCACCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCCCCCCCTTCCCTTCTTGCATGGCACCGATTTTACAATTTTTTAAAAAATTTATTTTATTGTCTCTTTATTATACATAAAGGAAGGATATTTGAAAACACTGAAAAGAAAATGAAAAACTTTTTTGTTAATTTTTTATATCCCAAAATATATTTATTTTATTTCAAACTGTTTGTGTGATAAAGTTTGGTTTTAAATTGAATTGCAATTGGTAAATAAGTTTTCTTTATATTTAGAATTATTATGAGTTTTTTTATTGTTTTGATTCTCCAAAGCATTTTGAATGTTTATGATTGGTTACATTTGGCGCCAAAACTACTTTATTTTTTTTATATCTACTTACAAATAACGTTTACCGAACTTTTATCTTGGAACTTAGCCCAAAAAGATAATCTAATAAGGCCCTTAATTTCTTTTATGGGCCAGCCCAATTCTTTGCCTTGATCAAGCCCAATGGACCAAGGAACCCAAGGTCAGTTTCGGAGAGGCAAGCTACAAGACCAATTTTTCTTTTTCTTTCTTTCTTTTCTTTCTAAATTGCAAAAAGTATCCTCAACTTTGTCCTTTGTTGCAAAAATTCAAATGATTTTATCTCTGACATTTCGTAAATGTTTCAAAAGAGATTGAATACAGATCTGGGACAGATGTAGCAGTGTTCTAAATCTTAATTTTCTCCCAACATTCTCATGAGGATATGGTAAAGTCTAGTGGTAGATTTCGTGTTTTCTGCTATGATGTCAAAAGTCACTTCTCCTAAAGCACTTTAAATATTTATTAGTATTTTCACAAATGTTAATATCTATTTCAATTCGAATAGGGTAGAAAAGATCTTTCACCTGTCCAAAAGTCTATGATTTATTAATACAAAATGGGCTTCCATTTTGCATTCAACCAGCCAGATGGATTAACAATAGATCTGACTAATGGTCAATTTTCAGGCTGAAAAGAAATGATGACAAAAATAAAGTAAACAGAAAATCTAAATCTTGACTAATTTTGAACTTTGCAGCGAAGAACCTACGCTGAAGATGGACAATGTGATATTGAAAGAAGATTCTGACCCAATACAACAGGCTCAAGATCAAGAACTTAAAGGTGCTGTAGACACTTTATTTACCTTCCCAGCTTGTGATACTTAGCTTCAAGCCAGCCCTTTCTCCTTCCCCACTATAGTTTTCTTTGATTATTATTTAGTCCACAAATGCCTTTGGAGAAGGTGTAAGTCATCTATAAAAGAGAATGGGGTAAAAATTGAATAAATTACACCCTTCTCCAATATTCTTTCCATGTACTTAGACACATCACTATACCAATTCATTATTATTATTTTTTTTTTCGTATTTCACAGGAATTCAAAAATTGTTCATGCTGTCTTATGATTTCCATTTTATTGTTACTAACGACCTCAAATGGTTGACGTTCAAAAGTTAATACACCTACTCGAGATTGGTGATTTAAACCTCCAAACAAAAAAAAGTATAGCTAAAAAAGTGAATATTCAAAGGGCTCATCTAATCTCTTCTCATTAAGCTTATTACATAAAAGTGGGGAAAGAAACTAACTTGAATCGTTCACGAAAGAATGTTGTAGATGAACATTGGTTCTTTCAGACCAGTTGCTTAGTTTCTCTTTGCTTCTTACTAACAACCTCAAAAGGTTGCAGGTTCGGGGGTTAAGGCACCTGCTCCTGCTTCTTTCCTTCAAGTAG ATGAGCCCCATCAATCACCACCAACACTTCTCCAAATCCACCTCCGCCGCCGTCACAACCACCACTTCCTCCAACACCACCACCCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCCTTCTCGCCCCTTATTTCCCTCACGATCGTCAACGTCAATTCCTAAACGCTCATAAACTCTTCGGCGTTAGCAATATCACTAAAATCATTAAGAATCTCGATCCGTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTTCGATCCGTCGATCCTGTTGGCGGTTGTTACCGGATTATTCGAGACCTTCAACGCCAAATTGAATATAGCAAGGCGGAGCTTGAGATCGTGCTTCATCAATTGGCTATTTGTAAACAGCAGGCCGCTGCTGCTGCGGCGGCTGCGGCTATTCTTGAGGCGGATCCGATGAGTGGATACGGCGGAATTGAGCATCAATTTGTGGAAGGGTATGAAGGGGAAGGGTTTGTAGTTGGGGAAAATGAGAAAGGGGAAAGTTTGGAAGATCGGGACGTGGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCATTACAATTGAAACAAGCCGGCTCTGTTCATGATTTTCACGATATCAAGATCGATACAAATAATAATCACCTTCAACAACAACTTAAATTTCAACACGATCATCATCCTGATCTGGTTCATCAGAGCGAAGAACCTACGCTGAAGATGGACAATGTGATATTGAAAGAAGATTCTGACCCAATACAACAGGCTCAAGATCAAGAACTTAAAGACCAGTTGCTTAGTTTCTCTTTGCTTCTTACTAACAACCTCAAAAGGTTGCAGGTTCGGGGGTTAAGGCACCTGCTCCTGCTTCTTTCCTTCAAGTAG ATGAGCCCCATCAATCACCACCAACACTTCTCCAAATCCACCTCCGCCGCCGTCACAACCACCACTTCCTCCAACACCACCACCCAAGCCTGCGCCGCCTGTAAGTACCAACGCCGTAAGTGCGCTCCCGATTGCCTTCTCGCCCCTTATTTCCCTCACGATCGTCAACGTCAATTCCTAAACGCTCATAAACTCTTCGGCGTTAGCAATATCACTAAAATCATTAAGAATCTCGATCCGTTTGAGAAGGAAGAAGCAATGCGTACCATTATTTTTCAATCTGATGTTCGATCCGTCGATCCTGTTGGCGGTTGTTACCGGATTATTCGAGACCTTCAACGCCAAATTGAATATAGCAAGGCGGAGCTTGAGATCGTGCTTCATCAATTGGCTATTTGTAAACAGCAGGCCGCTGCTGCTGCGGCGGCTGCGGCTATTCTTGAGGCGGATCCGATGAGTGGATACGGCGGAATTGAGCATCAATTTGTGGAAGGGTATGAAGGGGAAGGGTTTGTAGTTGGGGAAAATGAGAAAGGGGAAAGTTTGGAAGATCGGGACGTGGAGGTTTGGGGAATTCAAGATTCGTGTTCTTCATTACAATTGAAACAAGCCGGCTCTGTTCATGATTTTCACGATATCAAGATCGATACAAATAATAATCACCTTCAACAACAACTTAAATTTCAACACGATCATCATCCTGATCTGGTTCATCAGAGCGAAGAACCTACGCTGAAGATGGACAATGTGATATTGAAAGAAGATTCTGACCCAATACAACAGGCTCAAGATCAAGAACTTAAAGACCAGTTGCTTAGTTTCTCTTTGCTTCTTACTAACAACCTCAAAAGGTTGCAGGTTCGGGGGTTAAGGCACCTGCTCCTGCTTCTTTCCTTCAAGTAG MSPINHHQHFSKSTSAAVTTTTSSNTTTQACAACKYQRRKCAPDCLLAPYFPHDRQRQFLNAHKLFGVSNITKIIKNLDPFEKEEAMRTIIFQSDVRSVDPVGGCYRIIRDLQRQIEYSKAELEIVLHQLAICKQQAAAAAAAAAILEADPMSGYGGIEHQFVEGYEGEGFVVGENEKGESLEDRDVEVWGIQDSCSSLQLKQAGSVHDFHDIKIDTNNNHLQQQLKFQHDHHPDLVHQSEEPTLKMDNVILKEDSDPIQQAQDQELKDQLLSFSLLLTNNLKRLQVRGLRHLLLLLSFK Homology
BLAST of CcUC09G163190 vs. NCBI nr
Match: XP_038899918.1 (LOB domain-containing protein 22 [Benincasa hispida]) HSP 1 Score: 485.3 bits (1248), Expect = 3.7e-133 Identity = 254/284 (89.44%), Postives = 264/284 (92.96%), Query Frame = 0
BLAST of CcUC09G163190 vs. NCBI nr
Match: XP_011659803.2 (LOB domain-containing protein 22 [Cucumis sativus] >KGN45524.1 hypothetical protein Csa_015647 [Cucumis sativus]) HSP 1 Score: 461.5 bits (1186), Expect = 5.7e-126 Identity = 246/285 (86.32%), Postives = 258/285 (90.53%), Query Frame = 0
BLAST of CcUC09G163190 vs. NCBI nr
Match: XP_022991793.1 (LOB domain-containing protein 29-like [Cucurbita maxima]) HSP 1 Score: 408.7 bits (1049), Expect = 4.4e-110 Identity = 225/290 (77.59%), Postives = 241/290 (83.10%), Query Frame = 0
BLAST of CcUC09G163190 vs. NCBI nr
Match: XP_022953930.1 (LOB domain-containing protein 29-like [Cucurbita moschata]) HSP 1 Score: 406.0 bits (1042), Expect = 2.8e-109 Identity = 225/299 (75.25%), Postives = 242/299 (80.94%), Query Frame = 0
BLAST of CcUC09G163190 vs. NCBI nr
Match: KAG7014013.1 (LOB domain-containing protein 22, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 405.6 bits (1041), Expect = 3.7e-109 Identity = 225/300 (75.00%), Postives = 241/300 (80.33%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy Swiss-Prot
Match: Q9LRW1 (LOB domain-containing protein 22 OS=Arabidopsis thaliana OX=3702 GN=LBD22 PE=2 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 9.7e-44 Identity = 87/119 (73.11%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy Swiss-Prot
Match: Q9SSM9 (LOB domain-containing protein 7 OS=Arabidopsis thaliana OX=3702 GN=LBD7 PE=2 SV=1) HSP 1 Score: 123.6 bits (309), Expect = 3.7e-27 Identity = 57/120 (47.50%), Postives = 87/120 (72.50%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy Swiss-Prot
Match: A2WXT0 (LOB domain-containing protein 6 OS=Oryza sativa subsp. indica OX=39946 GN=LBD6 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25 Identity = 58/133 (43.61%), Postives = 90/133 (67.67%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy Swiss-Prot
Match: Q8LQH4 (LOB domain-containing protein 6 OS=Oryza sativa subsp. japonica OX=39947 GN=LBD6 PE=2 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 1.6e-25 Identity = 58/133 (43.61%), Postives = 90/133 (67.67%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy Swiss-Prot
Match: Q9STS6 (LOB domain-containing protein 27 OS=Arabidopsis thaliana OX=3702 GN=LBD27 PE=1 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 1.0e-24 Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy TrEMBL
Match: A0A0A0K9M3 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G451300 PE=3 SV=1) HSP 1 Score: 461.5 bits (1186), Expect = 2.8e-126 Identity = 246/285 (86.32%), Postives = 258/285 (90.53%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy TrEMBL
Match: A0A6J1JXA6 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111488330 PE=3 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 2.1e-110 Identity = 225/290 (77.59%), Postives = 241/290 (83.10%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy TrEMBL
Match: A0A6J1GR11 (LOB domain-containing protein 29-like OS=Cucurbita moschata OX=3662 GN=LOC111456336 PE=3 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.4e-109 Identity = 225/299 (75.25%), Postives = 242/299 (80.94%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy TrEMBL
Match: A0A1S4E3M5 (LOB domain-containing protein 22 OS=Cucumis melo OX=3656 GN=LOC103500724 PE=3 SV=1) HSP 1 Score: 363.2 bits (931), Expect = 1.0e-96 Identity = 193/216 (89.35%), Postives = 199/216 (92.13%), Query Frame = 0
BLAST of CcUC09G163190 vs. ExPASy TrEMBL
Match: A0A6J1KGC6 (uncharacterized protein LOC111494882 OS=Cucurbita maxima OX=3661 GN=LOC111494882 PE=3 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 8.1e-86 Identity = 189/279 (67.74%), Postives = 219/279 (78.49%), Query Frame = 0
BLAST of CcUC09G163190 vs. TAIR 10
Match: AT3G13850.1 (LOB domain-containing protein 22 ) HSP 1 Score: 178.7 bits (452), Expect = 6.9e-45 Identity = 87/119 (73.11%), Postives = 103/119 (86.55%), Query Frame = 0
BLAST of CcUC09G163190 vs. TAIR 10
Match: AT1G72980.1 (LOB domain-containing protein 7 ) HSP 1 Score: 123.6 bits (309), Expect = 2.6e-28 Identity = 57/120 (47.50%), Postives = 87/120 (72.50%), Query Frame = 0
BLAST of CcUC09G163190 vs. TAIR 10
Match: AT3G47870.1 (LOB domain-containing protein 27 ) HSP 1 Score: 115.5 bits (288), Expect = 7.2e-26 Identity = 59/121 (48.76%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of CcUC09G163190 vs. TAIR 10
Match: AT1G65620.1 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 107.1 bits (266), Expect = 2.5e-23 Identity = 50/121 (41.32%), Postives = 80/121 (66.12%), Query Frame = 0
BLAST of CcUC09G163190 vs. TAIR 10
Match: AT1G65620.2 (Lateral organ boundaries (LOB) domain family protein ) HSP 1 Score: 107.1 bits (266), Expect = 2.5e-23 Identity = 50/121 (41.32%), Postives = 80/121 (66.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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