CcUC09G162680 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC09G162680
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr09: 208853 .. 212421 (-)
RNA-Seq ExpressionCcUC09G162680
SyntenyCcUC09G162680
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTCTAATTACAATAATTATCTTTATTAATTGAATTAAATTTTTTTTTTTAAGGGGGGAAAAGAAAAAGAAGAAAAAAGGAAAATGGGAATTAGTTTGTTGAGAAAATGAAAAGAAAAAAAAAAAATAGAAGTAGAGGGGCATGCTTTCGTATATTTTGTGTTGTCGAAAAAACAGATGAATAAAAAAGCACTTATTTCGAAAAGCACTAACATGGTCAATAACACAAATTCATTATCTAATAATTCTGTAATATAAGATTAGGCCTCGGCCTTTGTAATTCTTTTACAACCTTTTCACATATAGAGAGAGAGTCATGGTACACTTGCAAAACAGTATGGGGCATGGGCCAACCACTAAAACATTTCCTTTTTTTTTTTTTCCTCCCTTTAAAAAAATAAATTAATTTTTTTATTTTTTTTTTTAAAGGGGGGAAAAAAAAAAAAAAAGGTGGGAATTGAAAATTAAATTTTTTTTTTTAAGGGTGGAAAAAAAAAAAAAAAGGTGGGAATTGAAAATTAAATTTTTTTTTTTTTCTTTTCATTTTCTCAACAAACTAATTCCCATTTTCCTTTTTTCTTCTTTTTCTTTTCCACCCTTAAAAAAAAAAAATTAACATTCGAATCACAACCTTTTTTCTTTTCTTTGTGCCATCCTCCCACTTTCCCCTGCAAAATGGTGCATTTTGGTAGATAGCCCCAAATTCTAATACCATATTAAACAAATATGAACTTCTATCTCGAAACTTGGCTTAATCCATCTTATTAAAAATGTGAGCTCTCTTGATTTTTTTCGTTGTGAAATTCTCGCCATGTCTACTTTTAAAATGTTTATTTGATCCTACAGTGGTTAATATACTTTTAAAATTAATGTCTATTTTGGTCACAATATGACCACTTTTGTCCTTTCATTTTGTTTACTTCATTATTAAAGGATCCAAAATGAACCAACATAGACTAAGATGAAAAGTGTAGGGATGAACTTGAAAATTTTGAAAGTATTAAGCAAAATGGAAAGTAGGGTGTAAAGTAGTATTTAAAGAAGAAAAAATTGAGACTTTAATGTTTGAATGAGAAGAGACATACCGGAAAATTCGGGGAAATTAGTTATTTAATGTTGATTTATAGCCGTTTCTTTCCAAATCTTTCATACCCTTTTGATTCCGATTCCTTTTTAAAACAGTTGAGAAGTTCTGTGCTGAATCGAGGGTGTTTTGGGTATTTCACAGTCATACCTCAGATTTGAATTTTTGAACTCATACGAGGTTTGCAAGATTCATTGACTCAAAAAAGGAAGAAAGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTCAGTTTTTTTTTGGGAAATATTTTTTTTTTTTTTTTTGTGCTTCCACATTTTACTGTTAAATCTCAAGGAATGAATGAGATAGATACCAACACAGGGAGCTTGTAATTAAATTCCATTTTACCCCTTCCCTTTCATTGTTGATGTTTTTCTGGGTACTGATAAATTAAATATTATATCAGTTAATATTTAGTTTCTTCTTTTTGGGAAATTGTTATTTGCTTGAAATGAAATCAAGTTTGAAGGATTGAAGAGACAGAATTATGGGATGTCCTTTGGGATTTATAAAAATTGCGTGAAGAATACTTCATTGACAAGAACAATTTGAACCAAAAAAAAAAAAAAAAAAATTTTTTTTTTTTTTAAAAAAAAAAAATTAAACAAAAAAAAAAAAAAACAAAAAAAACAAAAAACAAAAAACAAAGCTTTTCTAGAGACAGATTTCAACTTCTTGTTCTATGATTCTATCCCATTTCTTGCTTTCATGAAAAAGCTTAACAAACAAAGAAACAAAGATTGACTAACAGATCACTCAAAAACCATATGATGCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCCTCATCATCTTCTTCTTCTTCTTCTTCTTCTTCTTGCAGCATTTGGTTATTTGGTCTTCGCATTCTTACACTGCTCAAGCTGTTTCTTGCTGCCATTATTTCATTCAATGATAGCTTCTTCTTGGACCCTGGCTCTGGCCTTTGCTTTGGGGCACTTTGAGACCTCAGTTTTGCCTTGAAAGATTGTGTGTTCGCCATATAATTGGGGAAGTAGTTCATGTATGGCCTAAAGAAGCTGTCCCCGCACACGCTCTTGGATGGGGTGACTGGCACGTTGGCAGAGACGAACGAGTTATTCGATAGCCGGGGCGTGCTGTGAGCTGTAGGGAACTTGCAGTCCTCACCCATCAAGCACCATTCGAAGTCTTGAAGCACATTGTTGTGGCAATCCACAACGACGCGAGGTCGATTCGGACAAGGTAATGGCGATGAAGAGATTGCTTGGAAAGCTACATCATCTCCTCCGCATTCAGACAATGTCGAAATGTACCTACGAGACCTCGATCGAGTTCGGTAGGTGTCGATTTCCACGATTTTGGGACTCTCATCCAATGAATTCATACAGGTTGTGTCATAAGATGATGCTACAGACAACCTCTTACTATGGAATAATTCACTTCTTGTTTCATCAAAGCGTTCCTGTAAAATTTCCAAAGGAAATTTAATAAGACATTCAAAATTCAGTTGGATAACCATCTGAGTTTTGGATATCAAAATCTTACCGAAGATTTTCGGGGACGAATCTCGGGGATAAACCTGTTTTCTTTGTTGAAAGATCGACGAGCTCTCTGAGTTCTAACTGCAGTTTGAGCTCGAAAAAGAGCTTGCATACTGTGAAGAGTAGCAGCAGCTCTTTTCCTCACAAGAAATCCTCTAACCACAGCCTGCAATTTAACAAGCCCTTTGAGAGCTCGCAGGGCCTTTCTTGCCTGACCATATAAAAACAAACCCCATTTTCATTCACAGATTTCAAATTTTGAAATACCACTAAAAGTGGAAGGAAAGAAAAGGATCAGAACAGCTTTTGGATTTAGTCACCAAATGAATGTACTGTTTCATTGACACCTATGAGCTTTTTCTACTGTTTCATTCAGATTACGATACACTTTATGCTCTTCTTTTCTCAGCTTTCAAGGAGACAAAGAGAGAATGTAAAAAAAAAGTACCCTGTTTTGTAATTTTCATGGACTAAATATATATTTGTAAAAAAAGAAAAAAAAAAGTACAATTATTCTCGTGAAAAGAAGTTTGTAATGTAAAAAATAAAAAAAACAGAGCTAAAGCAGAGAAAAATTGAAGCTTTTTTTCTTTTTCTAAACTTACCAAATAGCCCCTAAAAACTGTTTGAATCTTCACAGCAGCCCATCTATCTCTTCCAGTGATATAAAGAGACCCTCTTCCTTGGCTAGTCAGGCGGACGACGGCCACCGCCGCTTGTGCGGCCGCGACGGCGGCGTCTGCGGCGGCGGCGGTGGCTGCAGCTACAGCAATTGCGTGTTTGTTCTGCTCTTTCTCTGAATCAGAAATGTAGGAGGATCTGAACCAAGTAGTGTCCGGCGGTGGAGGCGGCGTTTGGCCGGAATCTCTAGCGGACTTTGCAAAACTCCAGCGTTTCTTGTCCTTTCTGTCGGCGGCGAGGGTGGTTGA

mRNA sequence

ATGGCCCCTAAAAACTGTTTGAATCTTCACAGCAGCCCATCTATCTCTTCCAGTGATATAAAGAGACCCTCTTCCTTGGCTAGTCAGGCGGACGACGGCCACCGCCGCTTGTGCGGCCGCGACGGCGGCGTCTGCGGCGGCGGCGGTGGCTGCAGCTACAGCAATTGCGTAAATGTAGGAGGATCTGAACCAAGTAGTGTCCGGCGGTGGAGGCGGCGTTTGGCCGGAATCTCTAGCGGACTTTGCAAAACTCCAGCGTTTCTTGTCCTTTCTGTCGGCGGCGAGGGTGGTTGA

Coding sequence (CDS)

ATGGCCCCTAAAAACTGTTTGAATCTTCACAGCAGCCCATCTATCTCTTCCAGTGATATAAAGAGACCCTCTTCCTTGGCTAGTCAGGCGGACGACGGCCACCGCCGCTTGTGCGGCCGCGACGGCGGCGTCTGCGGCGGCGGCGGTGGCTGCAGCTACAGCAATTGCGTAAATGTAGGAGGATCTGAACCAAGTAGTGTCCGGCGGTGGAGGCGGCGTTTGGCCGGAATCTCTAGCGGACTTTGCAAAACTCCAGCGTTTCTTGTCCTTTCTGTCGGCGGCGAGGGTGGTTGA

Protein sequence

MAPKNCLNLHSSPSISSSDIKRPSSLASQADDGHRRLCGRDGGVCGGGGGCSYSNCVNVGGSEPSSVRRWRRRLAGISSGLCKTPAFLVLSVGGEGG
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 7..25
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..35

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC09G162680.1CcUC09G162680.1mRNA