CcUC08G160520 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTAAATTTGGGTACCAACAAGGACAGCACCGGATTAAATCGGCGACAAAGTCCTCGTTTGAATAAAGGATCCTGTACTCATCATCGTCTTCCTTCCGTCAGCGTTGTAATCTGAAGAACGCGGGCGGAGATGGAATTTTTTGGAATGGATTTCAGCTGTGTTTTCGGATCTCTAAGCCACGGCAAGTTCCCAGAGAAAGATTGCTTGCTTCCCCTCATCTCCAAGCTCCTCGGCTATTGCATTGTTGCCGCTTCAACCACCGTCAAACTTCCTCAGGCAACCTATTCTCTTTTCCCTCCCTAAACCATAAGTATATTTGTTTGACTTTATCAAGGGAAATGTGACGGGTTCGATTTCTTTGATCTCTAGTGTTTCTAATTAATGTTCTCTATTTTCGCTTTGCCCTCGTGAAATGTTTGTGAACAAATTTTGTGCTGTCTGAAGGGATGTTGATAATTTGATTCAAATAGGACAGTAATTAATAAGCATCTGCTACCTAATTAGGCTGTTTTGTAGTCTGTAGCTAAGAATCGCAACTTGTTCCAAGTCTAATTATGTGCTAAGTCAATCTCTTGAACTTATATCAATCACCGTAGAACAACCCTTCCTTTGAAATTCAAATTATTTATTTTGTTCTCTTCCAGTTCAACGTTTCTGCCTGAATAATTCTTACTAATTATTTTATATGCATCCCACGATGAGAAGATTGGATACCTGTTCCATTTTCGTCGTGAGTGCTTTACTTCATGCCATCATTGTAATGCAAAATTTAATTCTGCAGATAATGAAGATCTTGAAACATCAGAGTGTCAGAGGACTTAGTGTTATATCCTTTGAGCTAGAAGTCGTCGGTTACACTATTGCTCTGGCTTATTGTGTCCACAAAGGGCTTCCATTTTCAGCTTATGGGGAACTGGCATTTCTCTTGATTCAAGGTATATTGGGAAATACTAGAAAATTGATGCCACCGAGACATTTTCTGAAAAGAAAAAAAAAAAAAAAAATCTCCCTCATAAAATGCGTTACTGATTAAAATTGGAACATTAAATGGTCAAAATGGGAAAGAGTGAACTATATTTGATGATTAGATGTTATTGTTCTTAAATTAATTTAAGGTTGGGGGTTGAGTGGGTTGCTGATGAGGACAATGAATTATAGAATACTACTTGTAAATGTCAGTATATCAATCCCATCTTACGTTCTGTACATGGTTATGCATCTATGGTAAGTTGATAGATAAGAATATAAATATAATTGTATTTTAGGCGGACACTTCACGCCCTTGTGTATGAACATACGGTAAATTTTTTCTTGGAATCTACACTTTCACAATTGATGCAACCTTGACCTACTGCACTATGTCAATCAAGCTATAGCATAGGGCATTCAGATGCTAGTTCATCTTGTTATTTTAAATTACTTTTGATTAAGGTTGGTTAATAGTTTTATCCCTGGCCATTGGCCTATCTTTAACCGAGGACCCTAGTCAAATAAGCAACCCAAGTGTAAAGGATAACTCTTATAGCCTCTGAATCAAATATGGAATTGGTGGCTCTTCGCATTCCTGCACTACTCTGTTACTGTTGGTTGTACATACAAATCAGGTTCTTCATAATAATGGAACAAAATGGAGTTGTCTAAAATAGCCAATCTAACTCTTAGTTCACATTTTGCTCATTGTCCCAGGTTGCATTTCCAGAACCATTGGTTATATGCTTGCTTGAATTTTGTTTGCACAAATGCAGATGCTTTTTTATAAATTAAACCAAATTATCCTCTTCTAATGGGTATTGTTTTTTTGTCCTTTTTGTTTGCCACAGCTTTAATTTTGGTTGCCGTTATCTACTATTACTCTCAGCCTATTGGTATGAAAACGTGGATCAGGGCATTACTGTATCCTATTTGTTTTTCCACTATTTCATATTCTGCTTGTTTCTTGTTGCATTCTTTAATAATAAGGAACTTGAGACCTAGATCCTCCTGTGTTCTTGTTCATATATTAATTTTTGCTAAAGAATGGAGAACTTGTAACTGCTGCCTTAATAAGCTGGCCACTCAGATATTCTGCTCTAGCTCCAACAGTTTTAGCCGGTCAAATTAACCCTGTTCTCTTTGAAGCTCTATACGTAAGTCTCATACTGTTTTATTTATTTGTTTTTTCCTCTCCTCCTTTTAAACAAAAGATTTATCGCTTAAAGCTTTCTCAGTTTTTTGTAAAAAGTTTTTTTAGATATTTGTTTGTTCTGACTGTCACTAATGCATTTGTTCATTCCTCAAAGAAGGTAAATAAATGAAGAAAAATTGAAGACTTGCCTCTATGGGTATTGAAGTTTTTCTCCTGTAATAGTGCTATACTAAAAGCTTCCTAATTTGGAAACTACCTTTCAGGCATCTCAACATGCAATTTTTCTCTTCTCGAGGATCCCACAAATATGGAAGAACTTTTCTGTAAGTTGGAGGTTTTATTATACAATTTCAAATTTTCAATTCATATTATGTTGGTATATCATTCTTGCTTTATGAAGATTGCAAGGATTCAGAACAATAGCTGAACTTACTCTTATTTATTGCATCTAAATATGATGTTGGCATATCATTTGACATTTTTTCCCCATAAGAAATAGAGTTTTTATTAAGAAAAATGAAAGAATATACAAGGGCATGCAAGGGGGACTCCAAAAGAGGACTCCGAATGAATACAACAAAAGGACTCAAATCCCAAAACATGAAGCGTAGATGGTTACTATAAAATTTAATAGATATTGATTTTGATAGTAGGAAAGCATTTTTCTTTGTCTCTCGTTGGCAAGCTAGTTACTTGATGTAGGCTTGTAGTAGATACCCCGTTTCAATTCTAATTATCTTAAATCTTCTCTATGAAGTTTAAGTACTCACAAAGATGTTGATATCCTTGTATAAATCGAATGTGTCTTGTCGGATTCAATTGCTATAGTAAGTTCTATATGAATATTGATTTTGCAAGGATTAGAGCTCTCTTACCACATTCCGTTTAGGAAAGAAGAAAAGGAGATAAGGATAAAAATGTTGAATGATATTGGGATCTGTACTATGTCATAATTTCTCCAATTTCAAATCAAAAGATTAGGAGAGTGATTTGAAACTGAACCTTGTAATCACAAAAGACCAAACCAGCTGTTATCATGTTAACCAATGACAGTTCAAGTGCGAGTTTATCTTTCCCTTGTTTGAAGATTTTGGTGAGATTTAAGAAAGTCTTACATCTGCTGAAAGTGGTCATAAAATAAATCAGAACTTTGCTGCCATCTAATCTTCTATTTTCTGCCACCTTCGGCGTCTTTACTCTTTTGGTACTGAAACTCTTCCAAGTATTCTTCTTGTTCCTAATTTTTCATTGTTAGGGACATCAACCCTCCACAAATCTTCTTATTGGTTCATATATTGTTCACTTTTGGCATAAGTCATCCTCTTAGTTCTTTTGGTTTCACTTAAAAGTTCATACCAAATAATATTGTTTTTCACCTATATACCCTTATCAACTCCTTATCTAGTCAATGTCAGACTTTGGTCGCATTACCGACATTTATAAATAGTCTTTTCTTTGGCTTGATACCATGTCTTAATTGTATTTTCTTTTCATATCTCTTCAATGAAAGTTCTCATTCAAAAGAATAATCTTACACTTTACAGAACAAAAGTACTGGGGAGCTTAGCTTTTTAACATCCTTAATGAATTTTGGAGGTTCTATGGGTAAGACGATTACATAATGAAATTTAGTCCGTTGCATTAGTTTTCTTGTGAAGACATCAATCTTTATTCCTTTTTTTTTTTTTGCAGTAAGGGTTTTCACCAGTATCCAAGAAAATGCACCAAGAAGTGGTATCCTTTTCTTATTTGTTATTTTTTTCCCTTTTCGCTCTTAAATTATTTGGGTTAGTATTTGCAGTGATAACAGCATATAAGGATGATTCAAAATCAGTCTTAATGGCATACTGTACTGCAAGAACTTGGTAAAAACATCTAACAAATAACTATTTTTAGGAATTAACTTTTTGTTCAGAAGGTATTAGTTCTCAAAAACGCCGATTTTGTAAAATACAAGAATTTTTGGGCTTTTCTGGGTTGAATCTTTACATCTTTTCCAATTTTCTTAAGAATTTTCATTTTTTTTTTTTGTACTCATCGGCTGCATTTTTGACAATTATGAACTTGATTGCAAAAGTTAAAATTTCCTGTTTTCTGTTTGAAGAAAAATGTATTCAAGTTCTTTTCCTAGTTTATTCATTTTAACAAATTGTGGTCCTTGAATCTTGTCAAAGTTCTCATGGGATCGGCTCTTTCTATTGCAACAAACGGAACCATTTTGAGTCAGATAATTCTTTACCAGAAGAGGGATGTAAAGAAAGAGAAGAAAACAGAGTAGAGGATGAATACTTGCAGCTGCGGCTTTGCCATATTGAACATTAAAGCTTGTGTATAGTAAGTAAAGGTGAACCAAAGTCAAATACTTTAAAATGAAAGGTTCTGGACTCTCTCTACTGCGTGACAATTTCTCAAGCTTAGTCTTTAGCTCATTGCTGAACACTATCGTTCTCGAGATAATCATTTTATTACAAGAAGTCCAGAGTTCTTTTCTTTTCTTTTGGAATATAATGGCACATTGATTGCTGGAATCATTCATTAGGTTTTGACTAAGATCCCCACCTGACTATCGCCCCCATAAATTTATATCTGGGGTTGTAGAGGGACGGAGGTGGAATGTTCTTCGCTTATATTATAGTTCTGATT CTAAATTTGGGTACCAACAAGGACAGCACCGGATTAAATCGGCGACAAAGTCCTCGTTTGAATAAAGGATCCTGTACTCATCATCGTCTTCCTTCCGTCAGCGTTGTAATCTGAAGAACGCGGGCGGAGATGGAATTTTTTGGAATGGATTTCAGCTGTGTTTTCGGATCTCTAAGCCACGGCAAGTTCCCAGAGAAAGATTGCTTGCTTCCCCTCATCTCCAAGCTCCTCGGCTATTGCATTGTTGCCGCTTCAACCACCGTCAAACTTCCTCAGGCAACCTATTCTCTTTTCCCTCCCTAAACCATAAGTATATTTGTTTGACTTTATCAAGGGAAATGTGACGGGTTCGATTTCTTTGATCTCTAGTGTTTCTAATTAATGTTCTCTATTTTCGCTTTGCCCTCGTGAAATGTTTGTGAACAAATTTTGTGCTGTCTGAAGGGATGTTGATAATTTGATTCAAATAGGACAGTAATTAATAAGCATCTGCTACCTAATTAGGCTGTTTTGTAGTCTGTAGCTAAGAATCGCAACTTGTTCCAAGTCTAATTATGTGCTAAGTCAATCTCTTGAACTTATATCAATCACCGTAGAACAACCCTTCCTTTGAAATTCAAATTATTTATTTTGTTCTCTTCCAGTTCAACGTTTCTGCCTGAATAATTCTTACTAATTATTTTATATGCATCCCACGATGAGAAGATTGGATACCTGTTCCATTTTCGTCGTGAGTGCTTTACTTCATGCCATCATTGTAATGCAAAATTTAATTCTGCAGATAATGAAGATCTTGAAACATCAGAGTGTCAGAGGACTTAGTGTTATATCCTTTGAGCTAGAAGTCGTCGGTTACACTATTGCTCTGGCTTATTGTGTCCACAAAGGGCTTCCATTTTCAGCTTATGGGGAACTGGCATTTCTCTTGATTCAAGGTTGGGGGTTGAGTGGGTTGCTGATGAGGACAATGAATTATAGAATACTACTTGTAAATGTCAGTATATCAATCCCATCTTACGTTCTGTACATGGTTATGCATCTATGCTTTAATTTTGGTTGCCGTTATCTACTATTACTCTCAGCCTATTGGTATGAAAACGTGGATCAGGGCATTACTAATGGAGAACTTGTAACTGCTGCCTTAATAAGCTGGCCACTCAGATATTCTGCTCTAGCTCCAACAGTTTTAGCCGGTCAAATTAACCCTGTTCTCTTTGAAGCTCTATACGCATCTCAACATGCAATTTTTCTCTTCTCGAGGATCCCACAAATATGGAAGAACTTTTCTAACAAAAGTACTGGGGAGCTTAGCTTTTTAACATCCTTAATGAATTTTGGAGGTTCTATGGTAAGGGTTTTCACCAGTATCCAAGAAAATGCACCAAGAAGTGTTCTCATGGGATCGGCTCTTTCTATTGCAACAAACGGAACCATTTTGAGTCAGATAATTCTTTACCAGAAGAGGGATGTAAAGAAAGAGAAGAAAACAGAGTAGAGGATGAATACTTGCAGCTGCGGCTTTGCCATATTGAACATTAAAGCTTGTGTATAGTAAGTAAAGGTGAACCAAAGTCAAATACTTTAAAATGAAAGGTTCTGGACTCTCTCTACTGCGTGACAATTTCTCAAGCTTAGTCTTTAGCTCATTGCTGAACACTATCGTTCTCGAGATAATCATTTTATTACAAGAAGTCCAGAGTTCTTTTCTTTTCTTTTGGAATATAATGGCACATTGATTGCTGGAATCATTCATTAGGTTTTGACTAAGATCCCCACCTGACTATCGCCCCCATAAATTTATATCTGGGGTTGTAGAGGGACGGAGGTGGAATGTTCTTCGCTTATATTATAGTTCTGATT ATGCATCCCACGATGAGAAGATTGGATACCTGTTCCATTTTCGTCGTGAGTGCTTTACTTCATGCCATCATTGTAATGCAAAATTTAATTCTGCAGATAATGAAGATCTTGAAACATCAGAGTGTCAGAGGACTTAGTGTTATATCCTTTGAGCTAGAAGTCGTCGGTTACACTATTGCTCTGGCTTATTGTGTCCACAAAGGGCTTCCATTTTCAGCTTATGGGGAACTGGCATTTCTCTTGATTCAAGGTTGGGGGTTGAGTGGGTTGCTGATGAGGACAATGAATTATAGAATACTACTTGTAAATGTCAGTATATCAATCCCATCTTACGTTCTGTACATGGTTATGCATCTATGCTTTAATTTTGGTTGCCGTTATCTACTATTACTCTCAGCCTATTGGTATGAAAACGTGGATCAGGGCATTACTAATGGAGAACTTGTAACTGCTGCCTTAATAAGCTGGCCACTCAGATATTCTGCTCTAGCTCCAACAGTTTTAGCCGGTCAAATTAACCCTGTTCTCTTTGAAGCTCTATACGCATCTCAACATGCAATTTTTCTCTTCTCGAGGATCCCACAAATATGGAAGAACTTTTCTAACAAAAGTACTGGGGAGCTTAGCTTTTTAACATCCTTAATGAATTTTGGAGGTTCTATGGTAAGGGTTTTCACCAGTATCCAAGAAAATGCACCAAGAAGTGTTCTCATGGGATCGGCTCTTTCTATTGCAACAAACGGAACCATTTTGAGTCAGATAATTCTTTACCAGAAGAGGGATGTAAAGAAAGAGAAGAAAACAGAGTAG MHPTMRRLDTCSIFVVSALLHAIIVMQNLILQIMKILKHQSVRGLSVISFELEVVGYTIALAYCVHKGLPFSAYGELAFLLIQGWGLSGLLMRTMNYRILLVNVSISIPSYVLYMVMHLCFNFGCRYLLLLSAYWYENVDQGITNGELVTAALISWPLRYSALAPTVLAGQINPVLFEALYASQHAIFLFSRIPQIWKNFSNKSTGELSFLTSLMNFGGSMVRVFTSIQENAPRSVLMGSALSIATNGTILSQIILYQKRDVKKEKKTE Homology
BLAST of CcUC08G160520 vs. NCBI nr
Match: XP_038886542.1 (mannose-P-dolichol utilization defect 1 protein homolog 2 [Benincasa hispida]) HSP 1 Score: 282.3 bits (721), Expect = 4.3e-72 Identity = 176/262 (67.18%), Postives = 185/262 (70.61%), Query Frame = 0
BLAST of CcUC08G160520 vs. NCBI nr
Match: XP_004142876.1 (mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucumis sativus] >XP_008444595.1 PREDICTED: mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucumis melo] >ADN33725.1 mannose-P-dolichol utilization defect 1 protein [Cucumis melo subsp. melo] >KGN62483.1 hypothetical protein Csa_018783 [Cucumis sativus]) HSP 1 Score: 277.7 bits (709), Expect = 1.0e-70 Identity = 173/262 (66.03%), Postives = 184/262 (70.23%), Query Frame = 0
BLAST of CcUC08G160520 vs. NCBI nr
Match: XP_022132026.1 (mannose-P-dolichol utilization defect 1 protein homolog 2 [Momordica charantia]) HSP 1 Score: 273.9 bits (699), Expect = 1.5e-69 Identity = 163/264 (61.74%), Postives = 183/264 (69.32%), Query Frame = 0
BLAST of CcUC08G160520 vs. NCBI nr
Match: XP_023001966.1 (mannose-P-dolichol utilization defect 1 protein homolog 2 [Cucurbita maxima] >XP_023538232.1 mannose-P-dolichol utilization defect 1 protein homolog 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270.4 bits (690), Expect = 1.7e-68 Identity = 163/264 (61.74%), Postives = 181/264 (68.56%), Query Frame = 0
BLAST of CcUC08G160520 vs. NCBI nr
Match: XP_022951554.1 (mannose-P-dolichol utilization defect 1 protein homolog 2-like [Cucurbita moschata] >KAG6585680.1 Mannose-P-dolichol utilization defect 1 protein-like 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 270.4 bits (690), Expect = 1.7e-68 Identity = 163/264 (61.74%), Postives = 181/264 (68.56%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy Swiss-Prot
Match: Q8VY63 (Mannose-P-dolichol utilization defect 1 protein homolog 2 OS=Arabidopsis thaliana OX=3702 GN=At4g07390 PE=2 SV=1) HSP 1 Score: 230.7 bits (587), Expect = 1.9e-59 Identity = 136/262 (51.91%), Postives = 169/262 (64.50%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy Swiss-Prot
Match: Q9LTI3 (Mannose-P-dolichol utilization defect 1 protein homolog 1 OS=Arabidopsis thaliana OX=3702 GN=At5g59470 PE=2 SV=1) HSP 1 Score: 202.6 bits (514), Expect = 5.6e-51 Identity = 123/253 (48.62%), Postives = 161/253 (63.64%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy Swiss-Prot
Match: Q9VMW8 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Drosophila melanogaster OX=7227 GN=CG3792 PE=2 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 6.3e-10 Identity = 59/226 (26.11%), Postives = 97/226 (42.92%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy Swiss-Prot
Match: O75352 (Mannose-P-dolichol utilization defect 1 protein OS=Homo sapiens OX=9606 GN=MPDU1 PE=1 SV=2) HSP 1 Score: 61.2 bits (147), Expect = 2.0e-08 Identity = 75/263 (28.52%), Postives = 116/263 (44.11%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy Swiss-Prot
Match: Q9R0Q9 (Mannose-P-dolichol utilization defect 1 protein OS=Mus musculus OX=10090 GN=Mpdu1 PE=1 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.0e-07 Identity = 70/262 (26.72%), Postives = 112/262 (42.75%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy TrEMBL
Match: E5GB83 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 5.1e-71 Identity = 173/262 (66.03%), Postives = 184/262 (70.23%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy TrEMBL
Match: A0A0A0LL56 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis sativus OX=3659 GN=Csa_2G356080 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 5.1e-71 Identity = 173/262 (66.03%), Postives = 184/262 (70.23%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy TrEMBL
Match: A0A1S3BBF5 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucumis melo OX=3656 GN=LOC103487866 PE=3 SV=1) HSP 1 Score: 277.7 bits (709), Expect = 5.1e-71 Identity = 173/262 (66.03%), Postives = 184/262 (70.23%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy TrEMBL
Match: A0A6J1BR33 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Momordica charantia OX=3673 GN=LOC111004997 PE=3 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 7.3e-70 Identity = 163/264 (61.74%), Postives = 183/264 (69.32%), Query Frame = 0
BLAST of CcUC08G160520 vs. ExPASy TrEMBL
Match: A0A6J1KK36 (Mannose-P-dolichol utilization defect 1 protein homolog OS=Cucurbita maxima OX=3661 GN=LOC111495988 PE=3 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 8.1e-69 Identity = 163/264 (61.74%), Postives = 181/264 (68.56%), Query Frame = 0
BLAST of CcUC08G160520 vs. TAIR 10
Match: AT4G07390.1 (Mannose-P-dolichol utilization defect 1 protein ) HSP 1 Score: 230.7 bits (587), Expect = 1.4e-60 Identity = 136/262 (51.91%), Postives = 169/262 (64.50%), Query Frame = 0
BLAST of CcUC08G160520 vs. TAIR 10
Match: AT5G59470.1 (Mannose-P-dolichol utilization defect 1 protein ) HSP 1 Score: 202.6 bits (514), Expect = 4.0e-52 Identity = 123/253 (48.62%), Postives = 161/253 (63.64%), Query Frame = 0
BLAST of CcUC08G160520 vs. TAIR 10
Match: AT5G59470.2 (Mannose-P-dolichol utilization defect 1 protein ) HSP 1 Score: 82.0 bits (201), Expect = 7.9e-16 Identity = 44/76 (57.89%), Postives = 62/76 (81.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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