CcUC08G160390 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G160390
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	transcription factor HEC3-like
Location	CicolChr08: 28178953 .. 28180064 (-)
RNA-Seq Expression	CcUC08G160390
Synteny	CcUC08G160390

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGATATGGCGGACGCGGAGGATGCAATTAAGTGGGGAAGAGATGAGATGGATATTGTGAGTGTGATTGAGCAGATGCGAAAATTTGGAGAGAATTTAGAATATAATGAAGTGGCAGCTTCTTCTTCGGATTTTGCTTTTGGTAGTCCCAATATTGGTGTATGTGTAACTACTTCCACTTCACCTCCCATTTTTCCTTCTTTTAATAATCTCCCACCATCCACCGCCCTTTCAATCAGTAACGCCACTGCACCACCGCCTTTTCCACCCTATTCCGCCGCTGCCCGGTCCAAATACCATCTTCCCGCCACCCCAATTTCTGGCATGGTACGTATCTTACTTTATTTATTTATTTATTTTTATTTTTTTAGATTTTAGCTTTTATTTTAAAAACAATTCTAAAACGTAGACAACACAGACGTAGAAAATGACCTTTCGTTTTTAATTTTTAATTCTTGAAAATAAAACTTTTTTACTCCCCCTTTTTTTTTTTTTTTAAATTTTTCTAATTTTATAATAGTTTATGAATCCTTAAATAAATTTCAAAAAAGAAAGAAGATTTTAAAGCAGCTTACACTTTTTTTTTTTCTTTTCTTTATAGGTTTCAACTTAGTTTCAGCTTTATTTTGAAAAATTAAAAACAAAAAACGAAACAGTGACTAATTGGGGGTGGTTGATTATAGAAGGGAGAGGGGAAGGAATCAGAGTCAATGGGAGCGATGAGGGAGATGATATACAGAATAGCAGCGATGCAGCCAATAGAGATAGACCCAGAAGCAGTGAAACCACCGAAGCGTCGGAATGTTAAAATTTCAAAAGATCCTCAGAGTGTAGCGGCCAGGCTTAGAAGAGAGAGAATAAGCGAAAGAATTAGAATTCTTCAAAGAATTGTCCCCGGCGGCACCAAAATGGACACCGCCTCCATGTTAGACGAGGCCATTCATTACCTCAAGTTCTTGAAAAACCAACTTCATTCACTCCAAATTGCCGCCGCCGCCGCCACCAACCACCCCCCCTCCGCCGCCGCCTACCCCTTTCCCACCGCCATCTTCTCCGCTGGGACTACTAATTATAATAAAAAGCATCACTACCTGGAGGATGCTTCATTTTAA

mRNA sequence

ATGGATATGGCGGACGCGGAGGATGCAATTAAGTGGGGAAGAGATGAGATGGATATTGTGAGTGTGATTGAGCAGATGCGAAAATTTGGAGAGAATTTAGAATATAATGAAGTGGCAGCTTCTTCTTCGGATTTTGCTTTTGGTAGTCCCAATATTGGTGTATGTGTAACTACTTCCACTTCACCTCCCATTTTTCCTTCTTTTAATAATCTCCCACCATCCACCGCCCTTTCAATCAGTAACGCCACTGCACCACCGCCTTTTCCACCCTATTCCGCCGCTGCCCGGTCCAAATACCATCTTCCCGCCACCCCAATTTCTGGCATGAAGGGAGAGGGGAAGGAATCAGAGTCAATGGGAGCGATGAGGGAGATGATATACAGAATAGCAGCGATGCAGCCAATAGAGATAGACCCAGAAGCAGTGAAACCACCGAAGCGTCGGAATGTTAAAATTTCAAAAGATCCTCAGAGTGTAGCGGCCAGGCTTAGAAGAGAGAGAATAAGCGAAAGAATTAGAATTCTTCAAAGAATTGTCCCCGGCGGCACCAAAATGGACACCGCCTCCATGTTAGACGAGGCCATTCATTACCTCAAGTTCTTGAAAAACCAACTTCATTCACTCCAAATTGCCGCCGCCGCCGCCACCAACCACCCCCCCTCCGCCGCCGCCTACCCCTTTCCCACCGCCATCTTCTCCGCTGGGACTACTAATTATAATAAAAAGCATCACTACCTGGAGGATGCTTCATTTTAA

Coding sequence (CDS)

ATGGATATGGCGGACGCGGAGGATGCAATTAAGTGGGGAAGAGATGAGATGGATATTGTGAGTGTGATTGAGCAGATGCGAAAATTTGGAGAGAATTTAGAATATAATGAAGTGGCAGCTTCTTCTTCGGATTTTGCTTTTGGTAGTCCCAATATTGGTGTATGTGTAACTACTTCCACTTCACCTCCCATTTTTCCTTCTTTTAATAATCTCCCACCATCCACCGCCCTTTCAATCAGTAACGCCACTGCACCACCGCCTTTTCCACCCTATTCCGCCGCTGCCCGGTCCAAATACCATCTTCCCGCCACCCCAATTTCTGGCATGAAGGGAGAGGGGAAGGAATCAGAGTCAATGGGAGCGATGAGGGAGATGATATACAGAATAGCAGCGATGCAGCCAATAGAGATAGACCCAGAAGCAGTGAAACCACCGAAGCGTCGGAATGTTAAAATTTCAAAAGATCCTCAGAGTGTAGCGGCCAGGCTTAGAAGAGAGAGAATAAGCGAAAGAATTAGAATTCTTCAAAGAATTGTCCCCGGCGGCACCAAAATGGACACCGCCTCCATGTTAGACGAGGCCATTCATTACCTCAAGTTCTTGAAAAACCAACTTCATTCACTCCAAATTGCCGCCGCCGCCGCCACCAACCACCCCCCCTCCGCCGCCGCCTACCCCTTTCCCACCGCCATCTTCTCCGCTGGGACTACTAATTATAATAAAAAGCATCACTACCTGGAGGATGCTTCATTTTAA

Protein sequence

MDMADAEDAIKWGRDEMDIVSVIEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSPPIFPSFNNLPPSTALSISNATAPPPFPPYSAAARSKYHLPATPISGMKGEGKESESMGAMREMIYRIAAMQPIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNKKHHYLEDASF

Homology

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BLAST of CcUC08G160390 vs. NCBI nr
Match: XP_038886669.1 (transcription factor HEC2-like [Benincasa hispida])

HSP 1 Score: 284.3 bits (726), Expect = 1.0e-72
Identity = 164/232 (70.69%), Postives = 181/232 (78.02%), Query Frame = 0


Query: 20  VSVIEQMRKF--GENLEYNEVAASSSDFAFGSPNIGVCVTTSTSPPIFPSFNNLPPSTAL 79
           +++ + M +F   ENLE +EV   +  FAFGS NIGV  +TSTS PIF SFNNLPP +  
Sbjct: 1   MNIEDDMGEFAVAENLELSEVGGLA--FAFGSSNIGVSSSTSTSYPIFSSFNNLPPPSTF 60

Query: 80  SISNAT---APPPFPPYSAAAR-SKYHLPATPISGMKGEGKESESMGAMREMIYRIAAMQ 139
           S++N T   APP FPPYS+A R +  HLPATPIS MKGE +ESESMG MREMIYR+AAMQ
Sbjct: 61  SMNNPTQPVAPPSFPPYSSAPRWTSSHLPATPISAMKGEEEESESMGGMREMIYRMAAMQ 120

Query: 140 PIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDE 199
           PIEIDPE VKPPKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDE
Sbjct: 121 PIEIDPETVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDE 180

Query: 200 AIHYLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNKKHHY 246
           AIHYLKFLKNQLHSLQIAA         A  YPFPTA+ S GTTNY    H+
Sbjct: 181 AIHYLKFLKNQLHSLQIAA---------ATTYPFPTAMSSGGTTNYKHLFHF 221

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BLAST of CcUC08G160390 vs. NCBI nr
Match: XP_011650182.1 (transcription factor HEC3 [Cucumis sativus] >KAE8652076.1 hypothetical protein Csa_018561 [Cucumis sativus])

HSP 1 Score: 276.9 bits (707), Expect = 1.7e-70
Identity = 167/232 (71.98%), Postives = 183/232 (78.88%), Query Frame = 0


Query: 23  IEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSPPIFPSFNNLPPSTALSISNA 82
           IE+M KFGEN E NE+ A+S DF FGS NI     TSTS PIFPSFNN+PP+T LS++NA
Sbjct: 3   IEEMGKFGENFECNEI-ATSLDFGFGSSNI-----TSTSHPIFPSFNNIPPTT-LSMNNA 62

Query: 83  T---APPPFPPYSAAARSKYHLPATPISGMKG----EGKESESM-GAMREMIYRIAAMQP 142
           T   APP FPPYSAAAR + H PAT  S M G    EG ESESM G MREMIYRIAAMQP
Sbjct: 63  THAVAPPSFPPYSAAARWRSHFPATRNSRMAGEEEVEGSESESMGGGMREMIYRIAAMQP 122

Query: 143 IEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEA 202
           IEIDPEAVK PKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDEA
Sbjct: 123 IEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA 182

Query: 203 IHYLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNKKHHYL 247
           IHYLKFLKNQLHSLQIAAA++++   S++AY FPT        +YN K  +L
Sbjct: 183 IHYLKFLKNQLHSLQIAAASSSSSSSSSSAYAFPT------IAHYNNKQQHL 221

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BLAST of CcUC08G160390 vs. NCBI nr
Match: XP_008444609.1 (PREDICTED: transcription factor HEC3-like [Cucumis melo])

HSP 1 Score: 270.4 bits (690), Expect = 1.6e-68
Identity = 166/237 (70.04%), Postives = 181/237 (76.37%), Query Frame = 0


Query: 23  IEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSPPIFPSFNNLPPSTALSISNA 82
           IE+M KFGEN EYNE+ A++ DF FGS NI      STS  IFPSFNN+PP+T LS++NA
Sbjct: 3   IEEMGKFGENFEYNEI-ATTLDFGFGSSNI-----ASTSHLIFPSFNNIPPTT-LSMNNA 62

Query: 83  T---APPPFPPYSAAARSKYHLPATPISGMKG----EGKESESM-GAMREMIYRIAAMQP 142
           T   APP FPPYSAAAR + H PAT  SG  G    EG ESESM G MREMIYRIAAMQP
Sbjct: 63  THPVAPPSFPPYSAAARWRSHFPATRNSGTTGEEEVEGSESESMGGGMREMIYRIAAMQP 122

Query: 143 IEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEA 202
           IEIDPEAVK PKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDEA
Sbjct: 123 IEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA 182

Query: 203 IHYLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNKKHHYLEDASF 252
           IHYLKFLKNQLHSLQIAAA++     S++AY FPT        +YN K H +    F
Sbjct: 183 IHYLKFLKNQLHSLQIAAASS-----SSSAYVFPT------VAHYNNKQHLIHFPQF 221

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BLAST of CcUC08G160390 vs. NCBI nr
Match: XP_022996919.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 214.5 bits (545), Expect = 1.0e-51
Identity = 141/240 (58.75%), Postives = 165/240 (68.75%), Query Frame = 0


Query: 20  VSVIEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSP-PIFPSFNNLPPSTALS 79
           + V+ QM  F E  E+ ++ A  S F+FGS NIG       +P PI PS+     S+  S
Sbjct: 1   MDVLTQMENFSEYFEFTKLPA--SPFSFGSSNIGATSIRFQNPTPILPSY---ALSSTAS 60

Query: 80  ISNAT---APPPFPPYSAAARSKYHLPATPISGMKGEGKESESMGAMREMIYRIAAMQPI 139
           ++NAT   APP  PP+S+A        ATP S  K   ++ +SMGAMREMIYRIAAMQPI
Sbjct: 61  MNNATHPLAPPCLPPHSSA--------ATPNSHTK---QQQDSMGAMREMIYRIAAMQPI 120

Query: 140 EIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEAI 199
           +IDPEAVKPPKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDEAI
Sbjct: 121 QIDPEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAI 180

Query: 200 HYLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNK------KHHYLEDA 250
           HY+KFLKNQ+  LQI   AA N P SA  +P   A  SAG +NY +       H ++EDA
Sbjct: 181 HYVKFLKNQVQCLQI---AANNRPSSAFGFP---AAMSAGGSNYKQFHFAQSGHEHVEDA 218

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BLAST of CcUC08G160390 vs. NCBI nr
Match: KAG7029335.1 (Transcription factor HEC1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 213.4 bits (542), Expect = 2.3e-51
Identity = 142/241 (58.92%), Postives = 166/241 (68.88%), Query Frame = 0


Query: 20  VSVIEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCV--TTSTSPPIFPSFNNLPPSTAL 79
           + V+ QM  F E  E+ E+   SS F+FGS NIG       + +PPI PS+     S+  
Sbjct: 1   MDVLTQMENFSEFFEFTEL--PSSPFSFGSSNIGATSHRFQNPTPPILPSY---ALSSTA 60

Query: 80  SISNAT---APPPFPPYSAAARSKYHLPATPISGMKGEGKESESMGAMREMIYRIAAMQP 139
           S++NAT   APP  PP+S A        ATP S  K   ++ +SMGAMREMIYRIAAMQP
Sbjct: 61  SMNNATHPLAPPCPPPHSPA--------ATPNSHTK---QQQDSMGAMREMIYRIAAMQP 120

Query: 140 IEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEA 199
           I+IDPEAVKPPKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDEA
Sbjct: 121 IQIDPEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA 180

Query: 200 IHYLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNK------KHHYLED 250
           IHY+KFLK+Q+ SLQI   AA N P SA  +P   A  SAG +NY +       H ++ED
Sbjct: 181 IHYVKFLKSQVQSLQI---AANNRPSSAFRFP---AAMSAGGSNYKQFQFAQSGHEHVED 219

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BLAST of CcUC08G160390 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 9.6e-37
Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 118 SMGAMREMIYRIAAMQPIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQR 177
           +M AMREMI+RIA MQPI IDPEAVKPPKRRNV+ISKDPQSVAAR RRERISERIRILQR
Sbjct: 94  NMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQR 153

Query: 178 IVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQ 210
           +VPGGTKMDTASMLDEAIHY+KFLK Q+ SL+
Sbjct: 154 LVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185

[Close]

BLAST of CcUC08G160390 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 151.0 bits (380), Expect = 1.8e-35
Identity = 98/199 (49.25%), Postives = 129/199 (64.82%), Query Frame = 0


Query: 15  DEMDIV--SVIEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSPPIF-PSFNNL 74
           D  DI+   +++QM K  E+        S+S+      NI +   ++T P  F P+ ++L
Sbjct: 2   DNSDILMNMMMQQMEKLPEHF-------SNSNPNPNPHNIMMLSESNTHPFFFNPTHSHL 61

Query: 75  PPSTALSISNATAPPPFPPYSAAARSKY-HLPATPISGMKGEGKESESMGAMREMIYRIA 134
           P    +           P +      +Y   P++ +   +G   ++ +M AMREMI+RIA
Sbjct: 62  PFDQTM-----------PHHQPGLNFRYAPSPSSSLPEKRGGCSDNANMAAMREMIFRIA 121

Query: 135 AMQPIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASM 194
            MQPI IDPE+VKPPKR+NV+ISKDPQSVAAR RRERISERIRILQR+VPGGTKMDTASM
Sbjct: 122 VMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASM 181

Query: 195 LDEAIHYLKFLKNQLHSLQ 210
           LDEAIHY+KFLK Q+ SL+
Sbjct: 182 LDEAIHYVKFLKKQVQSLE 182

[Close]

BLAST of CcUC08G160390 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 141.4 bits (355), Expect = 1.4e-32
Identity = 82/138 (59.42%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 75  TALSISNATAPPPFPPYSAAARSKYHLPATPISGMKGEGKES----ESMGAMREMIYRIA 134
           T L I N  +   FPP S++  +      T +SG + + ++     E +GAM+EM+Y+IA
Sbjct: 49  TQLHIFNPFSSSHFPPLSSSLTT-----TTLLSGDQEDDEDEEEPLEELGAMKEMMYKIA 108

Query: 135 AMQPIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASM 194
           AMQ ++IDP  VK PKRRNV+IS DPQSVAAR RRERISERIRILQR+VPGGTKMDTASM
Sbjct: 109 AMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASM 168

Query: 195 LDEAIHYLKFLKNQLHSL 209
           LDEAI Y+KFLK Q+  L
Sbjct: 169 LDEAIRYVKFLKRQIRLL 181

[Close]

BLAST of CcUC08G160390 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 127.1 bits (318), Expect = 2.8e-28
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 91  YSAAARSKYHL----PATPISGMKGEGKESESMGAMREMIYRIAAMQPIEIDPEAVKPPK 150
           ++A     +HL    P   +  +  + +  E M AM+EM Y IA MQP++IDP  V  P 
Sbjct: 53  HAAFLNDPHHLMLDPPPETLIHLDEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPN 112

Query: 151 RRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLH 210
           RRNV+IS DPQ+V AR RRERISE+IRIL+RIVPGG KMDTASMLDEAI Y KFLK Q+ 
Sbjct: 113 RRNVRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVR 172

[Close]

BLAST of CcUC08G160390 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 6.9e-27
Identity = 61/95 (64.21%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 115 ESESMGAMREMIYRIAAMQPIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRI 174
           ++E++  M+EMIYR AA +P+    E V+ PKR+NVKIS DPQ+VAAR RRERISE+IR+
Sbjct: 238 DAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRV 297

Query: 175 LQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQ 210
           LQ +VPGGTKMDTASMLDEA +YLKFL+ Q+ +L+
Sbjct: 298 LQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332

[Close]

BLAST of CcUC08G160390 vs. ExPASy TrEMBL
Match: A0A0A0LRA8 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357190 PE=4 SV=1)

HSP 1 Score: 276.6 bits (706), Expect = 1.1e-70
Identity = 167/233 (71.67%), Postives = 183/233 (78.54%), Query Frame = 0


Query: 23  IEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSPPIFPSFNNLPPSTALSISNA 82
           IE+M KFGEN E NE+ A+S DF FGS NI     TSTS PIFPSFNN+PP+T LS++NA
Sbjct: 3   IEEMGKFGENFECNEI-ATSLDFGFGSSNI-----TSTSHPIFPSFNNIPPTT-LSMNNA 62

Query: 83  T---APPPFPPYSAAARSKYHLPATPISGMKG-----EGKESESM-GAMREMIYRIAAMQ 142
           T   APP FPPYSAAAR + H PAT  S MK      EG ESESM G MREMIYRIAAMQ
Sbjct: 63  THAVAPPSFPPYSAAARWRSHFPATRNSRMKAGEEEVEGSESESMGGGMREMIYRIAAMQ 122

Query: 143 PIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDE 202
           PIEIDPEAVK PKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDE
Sbjct: 123 PIEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDE 182

Query: 203 AIHYLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNKKHHYL 247
           AIHYLKFLKNQLHSLQIAAA++++   S++AY FPT        +YN K  +L
Sbjct: 183 AIHYLKFLKNQLHSLQIAAASSSSSSSSSSAYAFPT------IAHYNNKQQHL 222

[Close]

BLAST of CcUC08G160390 vs. ExPASy TrEMBL
Match: A0A1S3BA85 (transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103487880 PE=4 SV=1)

HSP 1 Score: 270.4 bits (690), Expect = 7.6e-69
Identity = 166/237 (70.04%), Postives = 181/237 (76.37%), Query Frame = 0


Query: 23  IEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSPPIFPSFNNLPPSTALSISNA 82
           IE+M KFGEN EYNE+ A++ DF FGS NI      STS  IFPSFNN+PP+T LS++NA
Sbjct: 3   IEEMGKFGENFEYNEI-ATTLDFGFGSSNI-----ASTSHLIFPSFNNIPPTT-LSMNNA 62

Query: 83  T---APPPFPPYSAAARSKYHLPATPISGMKG----EGKESESM-GAMREMIYRIAAMQP 142
           T   APP FPPYSAAAR + H PAT  SG  G    EG ESESM G MREMIYRIAAMQP
Sbjct: 63  THPVAPPSFPPYSAAARWRSHFPATRNSGTTGEEEVEGSESESMGGGMREMIYRIAAMQP 122

Query: 143 IEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEA 202
           IEIDPEAVK PKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDEA
Sbjct: 123 IEIDPEAVKAPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEA 182

Query: 203 IHYLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNKKHHYLEDASF 252
           IHYLKFLKNQLHSLQIAAA++     S++AY FPT        +YN K H +    F
Sbjct: 183 IHYLKFLKNQLHSLQIAAASS-----SSSAYVFPT------VAHYNNKQHLIHFPQF 221

[Close]

BLAST of CcUC08G160390 vs. ExPASy TrEMBL
Match: A0A6J1KA10 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111492009 PE=4 SV=1)

HSP 1 Score: 214.5 bits (545), Expect = 4.9e-52
Identity = 141/240 (58.75%), Postives = 165/240 (68.75%), Query Frame = 0


Query: 20  VSVIEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSP-PIFPSFNNLPPSTALS 79
           + V+ QM  F E  E+ ++ A  S F+FGS NIG       +P PI PS+     S+  S
Sbjct: 1   MDVLTQMENFSEYFEFTKLPA--SPFSFGSSNIGATSIRFQNPTPILPSY---ALSSTAS 60

Query: 80  ISNAT---APPPFPPYSAAARSKYHLPATPISGMKGEGKESESMGAMREMIYRIAAMQPI 139
           ++NAT   APP  PP+S+A        ATP S  K   ++ +SMGAMREMIYRIAAMQPI
Sbjct: 61  MNNATHPLAPPCLPPHSSA--------ATPNSHTK---QQQDSMGAMREMIYRIAAMQPI 120

Query: 140 EIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEAI 199
           +IDPEAVKPPKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDEAI
Sbjct: 121 QIDPEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAI 180

Query: 200 HYLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNK------KHHYLEDA 250
           HY+KFLKNQ+  LQI   AA N P SA  +P   A  SAG +NY +       H ++EDA
Sbjct: 181 HYVKFLKNQVQCLQI---AANNRPSSAFGFP---AAMSAGGSNYKQFHFAQSGHEHVEDA 218

[Close]

BLAST of CcUC08G160390 vs. ExPASy TrEMBL
Match: A0A6J1HET7 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111462825 PE=4 SV=1)

HSP 1 Score: 202.2 bits (513), Expect = 2.5e-48
Identity = 136/239 (56.90%), Postives = 161/239 (67.36%), Query Frame = 0


Query: 20  VSVIEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSPPIFPSFNNLPPSTALSI 79
           + V+ QM  F E  E+ +  +S+S   F +P          +PPI PS+     S+  S+
Sbjct: 1   MDVLTQMENFSEFFEFTDFGSSTS-HRFQNP----------TPPILPSY---ALSSTASM 60

Query: 80  SNAT---APPPFPPYSAAARSKYHLPATPISGMKGEGKESESMGAMREMIYRIAAMQPIE 139
           +NAT   APP  PP+S A        ATP S  K   ++ +SMGAMREMIYRIAAMQPI+
Sbjct: 61  NNATHPLAPPCPPPHSPA--------ATPNSHTK---QQQDSMGAMREMIYRIAAMQPIQ 120

Query: 140 IDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEAIH 199
           IDPEAVKPPKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDEAIH
Sbjct: 121 IDPEAVKPPKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIH 180

Query: 200 YLKFLKNQLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNK------KHHYLEDA 250
           Y+KFLK+Q+ SLQI   AA N P SA  +P   A  SAG +NY +       H ++EDA
Sbjct: 181 YVKFLKSQVQSLQI---AANNRPSSAFRFP---AAMSAGGSNYKQFQFAQSGHEHVEDA 208

[Close]

BLAST of CcUC08G160390 vs. ExPASy TrEMBL
Match: A0A5A7V0Q5 (Transcription factor HEC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G00430 PE=4 SV=1)

HSP 1 Score: 191.4 bits (485), Expect = 4.5e-45
Identity = 114/168 (67.86%), Postives = 124/168 (73.81%), Query Frame = 0


Query: 85  PPPFPPYSAAARSKYHLPATPISGMKGEGKESESM-GAMREMIYRIAAMQPIEIDPEAVK 144
           PP  P   +  R  Y          + EG ESESM G MREMIYRIAAMQPIEIDPEAVK
Sbjct: 27  PPAIPARISNLRPIYEYVLEKTGEEEVEGSESESMGGGMREMIYRIAAMQPIEIDPEAVK 86

Query: 145 PPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKN 204
            PKRRNVKISKDPQSVAAR RRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKN
Sbjct: 87  APKRRNVKISKDPQSVAARHRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKN 146

Query: 205 QLHSLQIAAAAATNHPPSAAAYPFPTAIFSAGTTNYNKKHHYLEDASF 252
           QLHSLQIAAA++++   S++AY FPT        +YN K H +    F
Sbjct: 147 QLHSLQIAAASSSS---SSSAYVFPT------VAHYNNKQHLIHFPQF 185

[Close]

BLAST of CcUC08G160390 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 155.2 bits (391), Expect = 6.8e-38
Identity = 79/92 (85.87%), Postives = 86/92 (93.48%), Query Frame = 0


Query: 118 SMGAMREMIYRIAAMQPIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQR 177
           +M AMREMI+RIA MQPI IDPEAVKPPKRRNV+ISKDPQSVAAR RRERISERIRILQR
Sbjct: 94  NMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRILQR 153

Query: 178 IVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQ 210
           +VPGGTKMDTASMLDEAIHY+KFLK Q+ SL+
Sbjct: 154 LVPGGTKMDTASMLDEAIHYVKFLKKQVQSLE 185

[Close]

BLAST of CcUC08G160390 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 98/199 (49.25%), Postives = 129/199 (64.82%), Query Frame = 0


Query: 15  DEMDIV--SVIEQMRKFGENLEYNEVAASSSDFAFGSPNIGVCVTTSTSPPIF-PSFNNL 74
           D  DI+   +++QM K  E+        S+S+      NI +   ++T P  F P+ ++L
Sbjct: 2   DNSDILMNMMMQQMEKLPEHF-------SNSNPNPNPHNIMMLSESNTHPFFFNPTHSHL 61

Query: 75  PPSTALSISNATAPPPFPPYSAAARSKY-HLPATPISGMKGEGKESESMGAMREMIYRIA 134
           P    +           P +      +Y   P++ +   +G   ++ +M AMREMI+RIA
Sbjct: 62  PFDQTM-----------PHHQPGLNFRYAPSPSSSLPEKRGGCSDNANMAAMREMIFRIA 121

Query: 135 AMQPIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASM 194
            MQPI IDPE+VKPPKR+NV+ISKDPQSVAAR RRERISERIRILQR+VPGGTKMDTASM
Sbjct: 122 VMQPIHIDPESVKPPKRKNVRISKDPQSVAARHRRERISERIRILQRLVPGGTKMDTASM 181

Query: 195 LDEAIHYLKFLKNQLHSLQ 210
           LDEAIHY+KFLK Q+ SL+
Sbjct: 182 LDEAIHYVKFLKKQVQSLE 182

[Close]

BLAST of CcUC08G160390 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 141.4 bits (355), Expect = 1.0e-33
Identity = 82/138 (59.42%), Postives = 101/138 (73.19%), Query Frame = 0


Query: 75  TALSISNATAPPPFPPYSAAARSKYHLPATPISGMKGEGKES----ESMGAMREMIYRIA 134
           T L I N  +   FPP S++  +      T +SG + + ++     E +GAM+EM+Y+IA
Sbjct: 49  TQLHIFNPFSSSHFPPLSSSLTT-----TTLLSGDQEDDEDEEEPLEELGAMKEMMYKIA 108

Query: 135 AMQPIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASM 194
           AMQ ++IDP  VK PKRRNV+IS DPQSVAAR RRERISERIRILQR+VPGGTKMDTASM
Sbjct: 109 AMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRLVPGGTKMDTASM 168

Query: 195 LDEAIHYLKFLKNQLHSL 209
           LDEAI Y+KFLK Q+  L
Sbjct: 169 LDEAIRYVKFLKRQIRLL 181

[Close]

BLAST of CcUC08G160390 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 127.1 bits (318), Expect = 2.0e-29
Identity = 70/123 (56.91%), Postives = 85/123 (69.11%), Query Frame = 0


Query: 91  YSAAARSKYHL----PATPISGMKGEGKESESMGAMREMIYRIAAMQPIEIDPEAVKPPK 150
           ++A     +HL    P   +  +  + +  E M AM+EM Y IA MQP++IDP  V  P 
Sbjct: 53  HAAFLNDPHHLMLDPPPETLIHLDEDEEYDEDMDAMKEMQYMIAVMQPVDIDPATVPKPN 112

Query: 151 RRNVKISKDPQSVAARLRRERISERIRILQRIVPGGTKMDTASMLDEAIHYLKFLKNQLH 210
           RRNV+IS DPQ+V AR RRERISE+IRIL+RIVPGG KMDTASMLDEAI Y KFLK Q+ 
Sbjct: 113 RRNVRISDDPQTVVARRRRERISEKIRILKRIVPGGAKMDTASMLDEAIRYTKFLKRQVR 172

[Close]

BLAST of CcUC08G160390 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 122.5 bits (306), Expect = 4.9e-28
Identity = 61/95 (64.21%), Postives = 79/95 (83.16%), Query Frame = 0


Query: 115 ESESMGAMREMIYRIAAMQPIEIDPEAVKPPKRRNVKISKDPQSVAARLRRERISERIRI 174
           ++E++  M+EMIYR AA +P+    E V+ PKR+NVKIS DPQ+VAAR RRERISE+IR+
Sbjct: 238 DAEAIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRV 297

Query: 175 LQRIVPGGTKMDTASMLDEAIHYLKFLKNQLHSLQ 210
           LQ +VPGGTKMDTASMLDEA +YLKFL+ Q+ +L+
Sbjct: 298 LQTLVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332

The following BLAST results are available for this feature:

BLAST of CcUC08G160390 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038886669.1	1.0e-72	70.69	transcription factor HEC2-like [Benincasa hispida]	[more]
XP_011650182.1	1.7e-70	71.98	transcription factor HEC3 [Cucumis sativus] >KAE8652076.1 hypothetical protein C...	[more]
XP_008444609.1	1.6e-68	70.04	PREDICTED: transcription factor HEC3-like [Cucumis melo]	[more]
XP_022996919.1	1.0e-51	58.75	transcription factor HEC2-like [Cucurbita maxima]	[more]
KAG7029335.1	2.3e-51	58.92	Transcription factor HEC1, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC08G160390 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHA7	9.6e-37	85.87	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	1.8e-35	49.25	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9LXD8	1.4e-32	59.42	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
O81313	2.8e-28	56.91	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]
Q8S3D2	6.9e-27	64.21	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]

BLAST of CcUC08G160390 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRA8	1.1e-70	71.67	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G357190 PE=4 S...	[more]
A0A1S3BA85	7.6e-69	70.04	transcription factor HEC3-like OS=Cucumis melo OX=3656 GN=LOC103487880 PE=4 SV=1	[more]
A0A6J1KA10	4.9e-52	58.75	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111492009 PE=4 ...	[more]
A0A6J1HET7	2.5e-48	56.90	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111462825 PE=...	[more]
A0A5A7V0Q5	4.5e-45	67.86	Transcription factor HEC3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]

BLAST of CcUC08G160390 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G67060.1	6.8e-38	85.87	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G50330.1	1.3e-36	49.25	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	1.0e-33	59.42	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	2.0e-29	56.91	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	4.9e-28	64.21	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 198..218
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 59..242
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 59..242
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 158..207 e-value: 8.9E-13 score: 58.4
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 162..201 e-value: 1.6E-6 score: 28.0
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 152..201 score: 15.186197
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 149..211 e-value: 1.0E-10 score: 43.1
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 156..210

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G160390.1	CcUC08G160390.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity