CcUC08G159780 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G159780
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionHistone-lysine N-methyltransferase
LocationCicolChr08: 27750381 .. 27750689 (-)
RNA-Seq ExpressionCcUC08G159780
SyntenyCcUC08G159780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGCTATGTCCCCTCAGCCTTATTCTGTCGAGAAGAAGATCGTCGGAGATCAAGAGGAGGCAGAGGCAGAAACAGAGGCGGCGGCGATAGGCCAAGCTGTGACGAGGCATATTGTGGTGAAGTCTTCGTCTTCTCAATCCAACCAAGCACTGGAGAAAGCGGTGGTGCTGCGGCGGATCCGGCAACGGAAGCGTGTTAACAAGTTCAGGGCGGTGGTTGGAGCTTTGTTCAGTTCACCGTTTACCGAAAAAACAGAGGAGACCCATCAGAGGAAATGGGTGGACGAACCCTTCACTTCACTCTAG

mRNA sequence

ATGGCGGCTATGTCCCCTCAGCCTTATTCTGTCGAGAAGAAGATCGTCGGAGATCAAGAGGAGGCAGAGGCAGAAACAGAGGCGGCGGCGATAGGCCAAGCTGTGACGAGGCATATTGTGGTGAAGTCTTCGTCTTCTCAATCCAACCAAGCACTGGAGAAAGCGGTGGTGCTGCGGCGGATCCGGCAACGGAAGCGTGTTAACAAGTTCAGGGCGGTGGTTGGAGCTTTGTTCAGTTCACCGTTTACCGAAAAAACAGAGGAGACCCATCAGAGGAAATGGGTGGACGAACCCTTCACTTCACTCTAG

Coding sequence (CDS)

ATGGCGGCTATGTCCCCTCAGCCTTATTCTGTCGAGAAGAAGATCGTCGGAGATCAAGAGGAGGCAGAGGCAGAAACAGAGGCGGCGGCGATAGGCCAAGCTGTGACGAGGCATATTGTGGTGAAGTCTTCGTCTTCTCAATCCAACCAAGCACTGGAGAAAGCGGTGGTGCTGCGGCGGATCCGGCAACGGAAGCGTGTTAACAAGTTCAGGGCGGTGGTTGGAGCTTTGTTCAGTTCACCGTTTACCGAAAAAACAGAGGAGACCCATCAGAGGAAATGGGTGGACGAACCCTTCACTTCACTCTAG

Protein sequence

MAAMSPQPYSVEKKIVGDQEEAEAETEAAAIGQAVTRHIVVKSSSSQSNQALEKAVVLRRIRQRKRVNKFRAVVGALFSSPFTEKTEETHQRKWVDEPFTSL
Homology
BLAST of CcUC08G159780 vs. NCBI nr
Match: KAA0065270.1 (hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa])

HSP 1 Score: 165.2 bits (417), Expect = 2.9e-37
Identity = 90/103 (87.38%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIVGDQEEAEAETE-AAAIGQAVTRHIVVKSSSSQSNQALEKAVVLR 60
           MAAMSP+PYSVEKKI GDQ EAE ETE +AA+G AVTRHIVVKSS S SNQALEKAVVLR
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR 60

Query: 61  RIRQRKRVNKFRAVVGALFSSPFTEKTEETHQRKWVDEPFTSL 103
           RIRQRKRVNK RA VGALFSSPFT+KTEETHQRKWVDEPFTSL
Sbjct: 61  RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of CcUC08G159780 vs. NCBI nr
Match: KGN62559.1 (hypothetical protein Csa_022598 [Cucumis sativus])

HSP 1 Score: 149.4 bits (376), Expect = 1.6e-32
Identity = 89/113 (78.76%), Postives = 92/113 (81.42%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIVGDQEEAEAETEAA-------AIGQAVTRHIVVKSSSS----QSN 60
           MAAMSPQPYSVEKKI GDQ EAE ETE+A       A+G AVTRHIVVKSSSS    QSN
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  QALEKAVVLRRIRQRKRVNKFRAVVGALFSSPFTEKTEETHQRKWVDEPFTSL 103
           QALEKAVVLRRIRQRKRVNK RA VGALFSSPFT+KTE    RKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE----RKWVDEPFTSL 109

BLAST of CcUC08G159780 vs. NCBI nr
Match: KAG6598407.1 (hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 136.7 bits (343), Expect = 1.1e-28
Identity = 78/104 (75.00%), Postives = 85/104 (81.73%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIVGDQEEA--EAETEAAAIGQAVTRHIVVKSSSSQSNQALEKAVVL 60
           MAAMSP P SVE  I G QEEA  E ETEAAA+G  VTRHI+VKSS S +  +LEKAVVL
Sbjct: 1   MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRS-TQVSLEKAVVL 60

Query: 61  RRIRQRKRVNKFRAVVGALFSSPFTEKTEETHQRKWVDEPFTSL 103
           RRIR RKRVNKF+AVVGALFSSPF +K +ET QRKWVDEPFTSL
Sbjct: 61  RRIRHRKRVNKFQAVVGALFSSPFADKADETRQRKWVDEPFTSL 103

BLAST of CcUC08G159780 vs. NCBI nr
Match: KAG6585633.1 (hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020540.1 hypothetical protein SDJN02_17225, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 112.5 bits (280), Expect = 2.2e-21
Identity = 69/102 (67.65%), Postives = 76/102 (74.51%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIVGDQEEAEAETEAAAIGQAVTRHIVVKSSSSQSNQALEKAVVLRR 60
           MAA+SP  Y      VGDQE+ +   +AAA    VTRHI +K  SS S Q LEKAVVLRR
Sbjct: 1   MAAVSPHSYP-----VGDQEKDKTVADAAA-SPDVTRHIRLK--SSHSTQVLEKAVVLRR 60

Query: 61  IRQRKRVNKFRAVVGALFSSPFTEKTEETHQRKWVDEPFTSL 103
           IRQRKRVNKF+AVVGALFSSPF +KT E  QRKWVDEPFTSL
Sbjct: 61  IRQRKRVNKFQAVVGALFSSPFGDKTGEARQRKWVDEPFTSL 94

BLAST of CcUC08G159780 vs. NCBI nr
Match: KAG7029360.1 (Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 110.2 bits (274), Expect = 1.1e-20
Identity = 66/91 (72.53%), Postives = 73/91 (80.22%), Query Frame = 0

Query: 1  MAAMSPQPYSVEKKIVGDQEEA--EAETEAAAIGQAVTRHIVVKSSSSQSNQALEKAVVL 60
          MAAMSP P SVE  I G QEEA  E ETEAAA+G  VTRHI+VKSS S +  +LEKAVVL
Sbjct: 1  MAAMSPHPCSVENSIAGAQEEAEMEMETEAAAVGPDVTRHIMVKSSRS-TQVSLEKAVVL 60

Query: 61 RRIRQRKRVNKFRAVVGALFSSPFTEKTEET 90
          RRIR RKRVNKF+AVVGALFSSPF +K +ET
Sbjct: 61 RRIRHRKRVNKFQAVVGALFSSPFADKADET 90

BLAST of CcUC08G159780 vs. ExPASy TrEMBL
Match: A0A5A7VDJ5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006120 PE=4 SV=1)

HSP 1 Score: 165.2 bits (417), Expect = 1.4e-37
Identity = 90/103 (87.38%), Postives = 94/103 (91.26%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIVGDQEEAEAETE-AAAIGQAVTRHIVVKSSSSQSNQALEKAVVLR 60
           MAAMSP+PYSVEKKI GDQ EAE ETE +AA+G AVTRHIVVKSS S SNQALEKAVVLR
Sbjct: 1   MAAMSPRPYSVEKKIDGDQVEAEIETEVSAALGPAVTRHIVVKSSPSHSNQALEKAVVLR 60

Query: 61  RIRQRKRVNKFRAVVGALFSSPFTEKTEETHQRKWVDEPFTSL 103
           RIRQRKRVNK RA VGALFSSPFT+KTEETHQRKWVDEPFTSL
Sbjct: 61  RIRQRKRVNKLRAAVGALFSSPFTDKTEETHQRKWVDEPFTSL 103

BLAST of CcUC08G159780 vs. ExPASy TrEMBL
Match: A0A0A0LNJ0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 7.9e-33
Identity = 89/113 (78.76%), Postives = 92/113 (81.42%), Query Frame = 0

Query: 1   MAAMSPQPYSVEKKIVGDQEEAEAETEAA-------AIGQAVTRHIVVKSSSS----QSN 60
           MAAMSPQPYSVEKKI GDQ EAE ETE+A       A+G AVTRHIVVKSSSS    QSN
Sbjct: 1   MAAMSPQPYSVEKKIAGDQVEAEIETESAAAGAGADALGPAVTRHIVVKSSSSSSSYQSN 60

Query: 61  QALEKAVVLRRIRQRKRVNKFRAVVGALFSSPFTEKTEETHQRKWVDEPFTSL 103
           QALEKAVVLRRIRQRKRVNK RA VGALFSSPFT+KTE    RKWVDEPFTSL
Sbjct: 61  QALEKAVVLRRIRQRKRVNKLRAAVGALFSSPFTDKTE----RKWVDEPFTSL 109

BLAST of CcUC08G159780 vs. ExPASy TrEMBL
Match: A0A6P5MGE6 (uncharacterized protein LOC110274446 OS=Arachis duranensis OX=130453 GN=LOC110274446 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 9.4e-10
Identity = 42/84 (50.00%), Postives = 53/84 (63.10%), Query Frame = 0

Query: 19  QEEAEAETEAAAIGQAVTRHIVVKSSSSQSNQALEKAVVLRRIRQRKRVNKFRAVVGALF 78
           +EE EAE E       VT  + +K S +Q    ++K VVLRRIR R+RVNK RA VG+ F
Sbjct: 14  REEDEAEFEKEESVPTVTSKLFLKPSENQKPGNMDKEVVLRRIRHRRRVNKVRAAVGSFF 73

Query: 79  SSPFTEKTEETHQRKWVDEPFTSL 103
           SSPF+      H RKWVD+PF +L
Sbjct: 74  SSPFS----TDHHRKWVDDPFAAL 93

BLAST of CcUC08G159780 vs. ExPASy TrEMBL
Match: A0A2N9G0R5 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1)

HSP 1 Score: 66.6 bits (161), Expect = 6.7e-08
Identity = 41/90 (45.56%), Postives = 56/90 (62.22%), Query Frame = 0

Query: 15  IVGDQEEAEAETEAAAIGQAVTRHIVVKSSSSQSNQALEKAVVLRRIRQRKRVNKFRAVV 74
           I  D+E+   ET+       VT H+ +K   + S Q L+K VVLRRIRQRKRVNK +A  
Sbjct: 23  IAVDEEQEVPETQ-----NPVTSHLYIK--PTHSTQPLDKEVVLRRIRQRKRVNKVKATF 82

Query: 75  GALFSSPFTEKTEE--THQRKWVDEPFTSL 103
            AL SSPF+ K ++   H++KW D+ F +L
Sbjct: 83  QALVSSPFSAKPDKVSVHKKKWADDAFAAL 105

BLAST of CcUC08G159780 vs. ExPASy TrEMBL
Match: A0A7N2KSH1 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.2e-07
Identity = 38/82 (46.34%), Postives = 52/82 (63.41%), Query Frame = 0

Query: 23  EAETEAAAIGQAVTRHIVVKSSSSQSNQALEKAVVLRRIRQRKRVNKFRAVVGALFSSPF 82
           + E E       VT H+ +K   + S Q L+K VVLRRIRQRKRVNK++A+V AL SS F
Sbjct: 26  DEEQEVPETNNLVTSHLYIK--PTDSTQTLDKEVVLRRIRQRKRVNKWKAMVQALVSSAF 85

Query: 83  TEKTEE---THQRKWVDEPFTS 102
           + K E+    H +KW+D+ F +
Sbjct: 86  SAKPEKAVSVHGKKWIDDAFAA 105

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAA0065270.12.9e-3787.38hypothetical protein E6C27_scaffold82G006120 [Cucumis melo var. makuwa][more]
KGN62559.11.6e-3278.76hypothetical protein Csa_022598 [Cucumis sativus][more]
KAG6598407.11.1e-2875.00hypothetical protein SDJN03_08185, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG6585633.12.2e-2167.65hypothetical protein SDJN03_18366, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAG7029360.11.1e-2072.53Wall-associated receptor kinase-like 14, partial [Cucurbita argyrosperma subsp. ... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7VDJ51.4e-3787.38Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
A0A0A0LNJ07.9e-3378.76Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360760 PE=4 SV=1[more]
A0A6P5MGE69.4e-1050.00uncharacterized protein LOC110274446 OS=Arachis duranensis OX=130453 GN=LOC11027... [more]
A0A2N9G0R56.7e-0845.56Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20842 PE=4 SV=1[more]
A0A7N2KSH11.2e-0746.34Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR35324:SF4BNAA08G03750D PROTEINcoord: 1..102
NoneNo IPR availablePANTHERPTHR35324BNAA08G03750D PROTEINcoord: 1..102

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G159780.1CcUC08G159780.1mRNA