CcUC08G159720 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G159720
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	mediator of RNA polymerase II transcription subunit 18
Location	CicolChr08: 27716128 .. 27721737 (-)
RNA-Seq Expression	CcUC08G159720
Synteny	CcUC08G159720

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGGCCACTAGATTAATGCAGCGACTTCGGCCAACCTCCGCCGTGTCTTCCTCTTCCTCTTCTTCATCTCCATCGTCGTTGACGACAGTGAGGTGTTTAGGCAAAACAGGGCTAAGTTTGAACAATGGCGAACGGTTAATAACTTCTAAAGACGACGAGAGAAGGCAGATAGTTGCCGTGAAAGCGGCGGCGGCTCCTGAGACTGTGGAAACTAAATCTGAAGAACTGAATTTGGGTTCTTTGTTGGTGAATCTGCTCGTTCAATTGAAGACTTCCGTGGGGAATACGAAGATTCAGAAGCGACAGATTCAGAAGTTCATCGAAAAGGTATTCAATTAAATTAAAGGTCATTGATTTAGCATTAATTAAAGCCTAATCAAAGTTTATGGATTTCTTCAGATCATAATCGACTGTCGATTCTTCACATTGTTAGCCGTCGCCGGATCTTTAATGGGTTCAGTACTCTGTTTTATTGAGGTGACCGACGCCGGATTCTTGTAGAACTCGTTTTCTTTCCATTCCTACTTTGTTTTTGCTCCCAATTTAAACTGCTCTGTTTTAAAATGTTCAGGGGAGTTTCATTGTTGCGGAGTCATATCTGCAGTACTTCCATGGTCTTTCACAGAGTTCGGACCAAACTCATACGGTGGAGCTTCTCATTGAAGCCTTAGGTAATTTCTGTACAGAAATTCAAACGCTAATTATTTTTTTTTTCTGATCGATTTGTTTACTAAATGCGATTCGAAACTCTTTGTCAGATATGTTCCTCGTCGGAACTGCTCTGGTTGTTTTTGGGGTCGGATTGTTTGCAATGTTCGTCGGATCGGAGAAGATGAAGGAAAAAAACCGGCCAGTAGTTTCTGGGTCGAATTTGTTTGGTCTGTTCTACATGAAGGTAAGTGGGTAAAACAGAGACCATAACAAAGACATAAATCCAACATATTGAATTATTTGTTAACGTTTTTGGTTTGAATTGAATTGTTTCTCAGAAAATTCCGACGTGGGTAGAAATGGAATCGATGTCAGAGGCGAAATCGAAGATCGGACATGCGGTGATGATGATACTGCAAGTGGGTGTGTTAGAAAAGTTCAAGAATATACCTTTGAGCTCTGCCGTCGATCTCGCATGTTTCGCCGCCGCCGTTCTTATTTCTTCCGCCTCCATCTTCTTCCTCTCGAAACTCAACATGGGGGGAGGCGGCAGCGGCGGTTTCAATTGAACCACCCCCCATGGAGGCGCGTGGCATCCACAAATTTATGTAATTTTTTTGGAAGATTAGGCTGAGGGAGAAGAGAGATATTTCCAATTCTTTTATTGTTATTAATTATTGTTTGTTTCGAAAATGCTACCAATTAATATAACACAATAGATTGTATTATTATAATTTTCCAGAGGTATGTTATAGTCTGGAAGAAGAGCATCAATATTATAACTGATTACTACAAATATAAATTGGTAAAGATATTAAATAACAAATAAACGATTAATAGCTGATGTGGAGGATTGCGTTGGGTCCTTCGTTGATCACTTGGATTGTGTTTGTAGGCTAGATTCAAAGATGTTCCAAGATGTCTGGAGATTAAGGTTATTAAAGTTAAGACTATTTGAGAAGGGTTAGATAGCATCATTCTGTCAATATTTATAATCTCATTGTTGAGTTAAATTGTTTTGAAGTTATTCGTCTTCTTAGTGATAAGTCCACTAATCTCTTTGACGATATGGTACGGGGCAAATTCTTTCATCCATGCAAAGCATTGACACAACATTATAGCTCATTCCCTGGTGGAAAGGGTGTTGGAGGAGCAATCATCCTATCTTCTCTTTTTTTCTCCTTTTTTTTTGGAGTGGTTTGTTTGGTTCTTATATTTTGATTTAATTCTATAGTTTTTTTCAACTTATTTTACTTAAAAGTAAAAATAAAAAAAAAAAGAAGAGAAAGAAAGATATGATTAATGCAACTCTTAAAAATGGATGGGACAAAATAAACATTTTTATTTTATCTAAGAAGATATCAATGCGATAATATAAGATGGGCAAGAGTTATTTAGAACGGTGAAGTATATTCACTTACTTGAACATAACTTAATAGTCTAGAATATATGTTTCTTACCAATAAATTAAAGGTCGAGTCTTTCCATTCTTACATGTTGATCCAAAAGATAAAAGAGAGTTGCCATAATATAGCCAAGAAAGATAACATCATAGCATACAAATTATACTTCAGGTAATTATGTTTAGGAAAAATTGTTAATTTACACGGTAAATTTGATGTTATATCAATTTAAACATTGATCTCTCATAAGTCTATCAATTTACAATATCCTTTAGATTTAGCTAAAAAAACATTGTGTAAGACATTTAATTTTTTCAATTAAACTTCTAAATTGTTATAAGTGAATCAACTCAAATTATTTTGTAAGATTATATTTGAAAATTGTTAATGAAGTTAATTTTTACACATGTGTAACTTTTTCAAATATTGTCAAAGTGAGTTTGGCCCGGTGATATTGACATGTATTTTCTCTCTAGCGATTAGAGGTTCAATTTTCCACCCTCGCAGTTGTTGTCCTAAAAAAATTTCTCTAGATATTCCATTAACAAAATGGGATAGAGAACAAATAGTTGGTCTTTTTTCTTTTCATTGAAGGATATAATTGACATTTCATATGCATCCCAAAAAGTCTTCATTTTGAAAAACAAGGCTGCCAAGGGATTGGGCCATAAAGCCCAAAGGCCAGGCTTAGGGATAATGGGCTTAATCAATCCTCAACAAACAATTCAAGGCGTGAAATTGCTCTGACTACGAGGTCGAGATTAGGATTTTGAAGAAACCCTCCATTCTTCGTGGTTTGAAGTTTGAACTTGAAGGCAGTGGAATTGTAGATGCAGCTCGGAATTTGAGGCTTCGGTTGAAGACGAATTGAGAAACCCATGATTTGAAACTGAAGCAAATCGAAGTGGCCGCAACTTAGACTACAATGGAGTGTGTGGTTCAGGGCATAATTGAGACCCAGGTAAGTTCCTTTTTCCTTTTCATTTCTGATTGTTTTTCTTCTAGGTTTTCCTTCTCGAGAAATTTCCCCTTTTGAAACCTACTCAACCCTTTTATTCGTTGTCTTCATAAGATCTTGTAAGAAGCACTTATGTTGTAGTTGACCCCTGAATCAATGTCTTCCTGCATTCTGCTAGTGCACCGCTATTCTTTATGACTATTATCTGTTGTTGTCTACCATTTTCAATGGAGGTTACTTTTTCCCTTGGTTATTCCTTTCTTGACAGTAGAAAGAAGTTTTGTGCTTTGGACTTTTATTCACAGTTTGATTGTGCAGCACGTTGAAGCTCTTGAGATTCTTCTTCAAGGTATTTGCGGCGTTCCTAGAGAAAGATTGAGGCTCCATGAAATATGCCTAAAAAGTGGACCTAGCCTAGGTATCCATGTGTTTCTTTATCCTAATATTTCATATTTTGCTTTCTCAGCATCTGATGGTACTCTTATCATATTTTTTTTACCCCTGATTTCCCTAGAGGGTGCTTGATGATACAATATTTAAATTTACCTTCAAACATTAGTTTAAGTTTTTTGGTCAAGCGGTGACTTAACGTGGTATCAGGACATGTGGTCTAGGTGTTTCAAACTCCTACAATGTTGTTTACTCCCGGATTAATATTGATTCAATTTGTTGGGTCTTCTACATATCTCAGGGCCACAATTGATGGGATGATAGATGATACAATATTTAAATTTACCTTCATCCATCAATTTAAGCTTTTGCATCAATCGGTGATCTAATAGAGTGATTGATATGAGTAGCATTTCTCCAAGTAAAAGAGAGGTTGTGGTTTACTTTTATAATACCATGTCTTATTTCGTAATCATTCGACATGATGCTAGGTGCTGTGGCTTCGGAGGTTCGGATCTTGTGCGACCTTGAGCAGGCTGAACCGACATGGTATAGTTTGATCGTTTGTAGTAATGGGGTGTTATTTGCTTTGGACTTGGAGCTACTGAACTAATGAGAACTGTCTCCATGAGTTTTTAGGACGGTTAAACATATTGGAGGGGCAATAAGAGGTGCAGGTGCTGAACAACTTTCTGTTCTGGTTAGGACAATGGTAGAAAGCAAAGTTAGCAAGAATGTGCTTCGTCTATTCTATGCACTTGGCTATAAGTTAGATCATGAGCTGCTGAGAGTTGGTTTTGCTTTCCGCTTTCACCGGGGTGCCCACATAACAGTGACGGTTTCATCAGTTAATAAGATGTTAAAGCTACATTCAACTGATGAGGCTGTACCTGTTACACCTGGTATTCAGCTGGTCGAAGTGACAGCCCCAGCAACTTCTGATAACTATTCTGAAGTAGCCGGTGCAGTGTCGACTTTCTGTGAATATCTTGCACCGTAAGTACTTCTATTGCCTTTTGTAGGATTAAACTTTTCATTACAATGAACAATTCAGTTGATGCATATTCAATAACCTATCTCATACACTGGAGCTGTGGATTGCTGATATTGACTTTAGAAAATCCTCCTTATGTGTACGTGTGTCATCTTGCCTCATTTGAACATGAAACAATTTACAAATATAGATCATAATTTGTATGTTGGTTGAATTGTTTTGCATTGACCTGGTCCAGTGTTTAGAAAACCCTCTGAGGCGCCTAGGCACATCATTTGCACCTCGCTTCAGATAACCGAGGCTCATATGAAGCCCACTTAAGGCGCACAATTCCTCAAACCTGATGTCCTACTTTCTTCTTTGGAATTGTGTACTTTTTAGAGAAGAAATGCAAGAATATTCTTATCATCGCGAATAGAAGCTCTATTTTTCTAAACTTTTTATCATCTTGGTAATCATCATACTATTTTTCTGCATATACTATTTTTTTAAAAAAAACACCCACGCTCAAGCTTAAGCCAAGGAGCACAAGCGCCCCTGATTTATAAAAAACAAGGACCAGCGCACAATTTCACTAGTTGCTATTGCATCGTAATCATTAACTTGCTTCTCCAAAGAAACTGGTAACTATATGTGTAGGGCTAGAAAGTTAAAATAATGTGTTGTATTTCTGGCATAGCTGGAATTAAAGATCAAACCCCAAATGTGCATGTCTTTGGCTCACTGTTTGTACTTTCTAAAGCTGACAAAATCAAGCTTTCCTCTTTTACTTGAACAGGCTGCTGCATTTGTCAAAACCCGGAATATCCACAGGTGTTGTTCCTACTGCTGCTGCAGCTGCAGCATCTCTTCTATCTGACGGTGCAGGAACAACAATGTAGATGGTTCATTTTGATAGCAACAGTTATTTTGAAGGTTCGTTACGTTGGCTGGAAACTGATTGTTTTCTTGGCATTGAAGTTCATCCATCTCTTTTTGAGCCATGATGGGAAAATATAATCTGAATTCTGGATTTGACAGCAAATTCTGCTAAAGTTTAGGAGTTGACCAAAACTTAGTCTCAAAAAGACTTCTTGTAGTTGATATACATGATGTCATGTTGGTTGCCATTGAGTTTAAAGTGGCCTTTAGCATATCTTGTTGATGTCTTCAAAGAAGAATGAATGCTTATATTTATGTAAATATCTTCAACTACCAGATCAACAACACTT

mRNA sequence

ATGACGGCCACTAGATTAATGCAGCGACTTCGGCCAACCTCCGCCGTGTCTTCCTCTTCCTCTTCTTCATCTCCATCGTCGTTGACGACAGTGAGGTGTTTAGGCAAAACAGGGCTAAGTTTGAACAATGGCGAACGGTTAATAACTTCTAAAGACGACGAGAGAAGGCAGATAGTTGCCGTGAAAGCGGCGGCGGCTCCTGAGACTGTGGAAACTAAATCTGAAGAACTGAATTTGGGTTCTTTGTTGGTGAATCTGCTCGTTCAATTGAAGACTTCCGTGGGGAATACGAAGATTCAGAAGCGACAGATTCAGAAGTTCATCGAAAAGATCATAATCGACTGTCGATTCTTCACATTGTTAGCCGTCGCCGGATCTTTAATGGGTTCAGTACTCTGTTTTATTGAGGGGAGTTTCATTGTTGCGGAGTCATATCTGCAGTACTTCCATGGTCTTTCACAGAGTTCGGACCAAACTCATACGGTGGAGCTTCTCATTGAAGCCTTAGATATGTTCCTCGTCGGAACTGCTCTGGTTGTTTTTGGGGTCGGATTGTTTGCAATGTTCGTCGGATCGGAGAAGATGAAGGAAAAAAACCGGCCAGTAGTTTCTGGGTCGAATTTGTTTGGTCTGTTCTACATGAAGAAAATTCCGACGTGGGTAGAAATGGAATCGATGTCAGAGGCGAAATCGAAGATCGGACATGCGGTGATGATGATACTGCAAGTGGGTGTGTTAGAAAAGTTCAAGAATATACCTTTGAGCTCTGCCGTCGATCTCGCATGTTTCGCCGCCGCCGTTCTTATTTCTTCCGCCTCCATCTTCTTCCTCTCGAAACTCAACATGGGGGGAGGCGGCAGCGGCGGTTTCAATTTGATTGTGCAGCACGTTGAAGCTCTTGAGATTCTTCTTCAAGGTATTTGCGGCGTTCCTAGAGAAAGATTGAGGCTCCATGAAATATGCCTAAAAAGTGGACCTAGCCTAGGTGCTGTGGCTTCGGAGGTTCGGATCTTGTGCGACCTTGAGCAGGCTGAACCGACATGGACGGTTAAACATATTGGAGGGGCAATAAGAGGTGCAGGTGCTGAACAACTTTCTGTTCTGGTTAGGACAATGGTAGAAAGCAAAGTTAGCAAGAATGTGCTTCGTCTATTCTATGCACTTGGCTATAAGTTAGATCATGAGCTGCTGAGAGTTGGTTTTGCTTTCCGCTTTCACCGGGGTGCCCACATAACAGTGACGGTTTCATCAGTTAATAAGATGTTAAAGCTACATTCAACTGATGAGGCTGTACCTGTTACACCTGGTATTCAGCTGGTCGAAGTGACAGCCCCAGCAACTTCTGATAACTATTCTGAAGTAGCCGGTGCAGTGTCGACTTTCTGTGAATATCTTGCACCGCTGCTGCATTTGTCAAAACCCGGAATATCCACAGGTGTTGTTCCTACTGCTGCTGCAGCTGCAGCATCTCTTCTATCTGACGGTGCAGGAACAACAATGTAGATGGTTCATTTTGATAGCAACAGTTATTTTGAAGGTTCGTTACGTTGGCTGGAAACTGATTGTTTTCTTGGCATTGAAGTTCATCCATCTCTTTTTGAGCCATGATGGGAAAATATAATCTGAATTCTGGATTTGACAGCAAATTCTGCTAAAGTTTAGGAGTTGACCAAAACTTAGTCTCAAAAAGACTTCTTGTAGTTGATATACATGATGTCATGTTGGTTGCCATTGAGTTTAAAGTGGCCTTTAGCATATCTTGTTGATGTCTTCAAAGAAGAATGAATGCTTATATTTATGTAAATATCTTCAACTACCAGATCAACAACACTT

Coding sequence (CDS)

ATGACGGCCACTAGATTAATGCAGCGACTTCGGCCAACCTCCGCCGTGTCTTCCTCTTCCTCTTCTTCATCTCCATCGTCGTTGACGACAGTGAGGTGTTTAGGCAAAACAGGGCTAAGTTTGAACAATGGCGAACGGTTAATAACTTCTAAAGACGACGAGAGAAGGCAGATAGTTGCCGTGAAAGCGGCGGCGGCTCCTGAGACTGTGGAAACTAAATCTGAAGAACTGAATTTGGGTTCTTTGTTGGTGAATCTGCTCGTTCAATTGAAGACTTCCGTGGGGAATACGAAGATTCAGAAGCGACAGATTCAGAAGTTCATCGAAAAGATCATAATCGACTGTCGATTCTTCACATTGTTAGCCGTCGCCGGATCTTTAATGGGTTCAGTACTCTGTTTTATTGAGGGGAGTTTCATTGTTGCGGAGTCATATCTGCAGTACTTCCATGGTCTTTCACAGAGTTCGGACCAAACTCATACGGTGGAGCTTCTCATTGAAGCCTTAGATATGTTCCTCGTCGGAACTGCTCTGGTTGTTTTTGGGGTCGGATTGTTTGCAATGTTCGTCGGATCGGAGAAGATGAAGGAAAAAAACCGGCCAGTAGTTTCTGGGTCGAATTTGTTTGGTCTGTTCTACATGAAGAAAATTCCGACGTGGGTAGAAATGGAATCGATGTCAGAGGCGAAATCGAAGATCGGACATGCGGTGATGATGATACTGCAAGTGGGTGTGTTAGAAAAGTTCAAGAATATACCTTTGAGCTCTGCCGTCGATCTCGCATGTTTCGCCGCCGCCGTTCTTATTTCTTCCGCCTCCATCTTCTTCCTCTCGAAACTCAACATGGGGGGAGGCGGCAGCGGCGGTTTCAATTTGATTGTGCAGCACGTTGAAGCTCTTGAGATTCTTCTTCAAGGTATTTGCGGCGTTCCTAGAGAAAGATTGAGGCTCCATGAAATATGCCTAAAAAGTGGACCTAGCCTAGGTGCTGTGGCTTCGGAGGTTCGGATCTTGTGCGACCTTGAGCAGGCTGAACCGACATGGACGGTTAAACATATTGGAGGGGCAATAAGAGGTGCAGGTGCTGAACAACTTTCTGTTCTGGTTAGGACAATGGTAGAAAGCAAAGTTAGCAAGAATGTGCTTCGTCTATTCTATGCACTTGGCTATAAGTTAGATCATGAGCTGCTGAGAGTTGGTTTTGCTTTCCGCTTTCACCGGGGTGCCCACATAACAGTGACGGTTTCATCAGTTAATAAGATGTTAAAGCTACATTCAACTGATGAGGCTGTACCTGTTACACCTGGTATTCAGCTGGTCGAAGTGACAGCCCCAGCAACTTCTGATAACTATTCTGAAGTAGCCGGTGCAGTGTCGACTTTCTGTGAATATCTTGCACCGCTGCTGCATTTGTCAAAACCCGGAATATCCACAGGTGTTGTTCCTACTGCTGCTGCAGCTGCAGCATCTCTTCTATCTGACGGTGCAGGAACAACAATGTAG

Protein sequence

MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVAVKAAAAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCRFFTLLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGTALVVFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGFNLIVQHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQAEPTWTVKHIGGAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAFRFHRGAHITVTVSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCEYLAPLLHLSKPGISTGVVPTAAAAAASLLSDGAGTTM

Homology

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BLAST of CcUC08G159720 vs. NCBI nr
Match: XP_038885641.1 (uncharacterized protein LOC120075956 [Benincasa hispida])

HSP 1 Score: 489.2 bits (1258), Expect = 4.3e-134
Identity = 260/290 (89.66%), Postives = 277/290 (95.52%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATR MQRLRP SAVSSSSSSSSPSS  TVRCLGKTGL+LNNGERLITS D ER+QIVA
Sbjct: 27  MVATRFMQRLRPASAVSSSSSSSSPSSAMTVRCLGKTGLNLNNGERLITSGDGERKQIVA 86

Query: 61  VKAAAAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCRFFTL 120
           VKAAAAP+TVET++EELNLGSLL NLLVQLKT+VG TKIQ+RQIQKFIEKIIIDCRFFTL
Sbjct: 87  VKAAAAPQTVETRTEELNLGSLLANLLVQLKTTVGKTKIQRRQIQKFIEKIIIDCRFFTL 146

Query: 121 LAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGTALVV 180
           LAVAGSL+GS+LC+IEGSFIVAESYLQYFHGLSQSS+Q HTVELLIEALDMFLVGTALVV
Sbjct: 147 LAVAGSLLGSILCYIEGSFIVAESYLQYFHGLSQSSNQNHTVELLIEALDMFLVGTALVV 206

Query: 181 FGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHAVMMI 240
           FGVGLFAMF+GS KMKEKNRPV+SGSN FGLF MKKIPTWVEMESMS+AKSKIGHAVMMI
Sbjct: 207 FGVGLFAMFIGSGKMKEKNRPVISGSNFFGLFRMKKIPTWVEMESMSQAKSKIGHAVMMI 266

Query: 241 LQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           LQVGVLEKFKNIPLSSAVDLACFAAAV++SSASIFFLSKLN+GGGGSGGF
Sbjct: 267 LQVGVLEKFKNIPLSSAVDLACFAAAVMVSSASIFFLSKLNLGGGGSGGF 316

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BLAST of CcUC08G159720 vs. NCBI nr
Match: KAA0065266.1 (UPF0114 domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 454.9 bits (1169), Expect = 8.9e-124
Identity = 248/291 (85.22%), Postives = 270/291 (92.78%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATR MQR+RP +AVSSSSSSSSPSS+T VR LGKTGL+LNNGERLITS   E RQ+VA
Sbjct: 1   MAATRFMQRVRPAAAVSSSSSSSSPSSMTNVRVLGKTGLNLNNGERLITSGGGEGRQLVA 60

Query: 61  VKAA-AAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCRFFT 120
           VKAA  AP+TVETK+ EL+LGSL+ +LLVQLKT++G TKI+KR+IQKFIEKIIIDCRFFT
Sbjct: 61  VKAATTAPKTVETKTGELDLGSLVSDLLVQLKTTLGKTKIKKREIQKFIEKIIIDCRFFT 120

Query: 121 LLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGTALV 180
           LLAV+GSLMGS+LC+IEGSFIVAESYLQYFH LSQ ++QTHTVELLIEALDMFLVGTALV
Sbjct: 121 LLAVSGSLMGSILCYIEGSFIVAESYLQYFHSLSQRTNQTHTVELLIEALDMFLVGTALV 180

Query: 181 VFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHAVMM 240
           VFG+GLFAMFVGSEKMKEKNR  +S SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMM
Sbjct: 181 VFGIGLFAMFVGSEKMKEKNRKWISRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAVMM 240

Query: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLN+G GGSGGF
Sbjct: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGEGGSGGF 291

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BLAST of CcUC08G159720 vs. NCBI nr
Match: XP_008444667.1 (PREDICTED: uncharacterized protein LOC103487936 [Cucumis melo])

HSP 1 Score: 453.0 bits (1164), Expect = 3.4e-123
Identity = 246/291 (84.54%), Postives = 270/291 (92.78%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATR MQR+RP +AVSSSSSSSSPSS+T VR LGKTGL+LNNGERLITS   E RQ++A
Sbjct: 1   MAATRFMQRVRPAAAVSSSSSSSSPSSMTNVRVLGKTGLNLNNGERLITSGGGEGRQLIA 60

Query: 61  VKAA-AAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCRFFT 120
           VKAA  AP+TVETK+ EL+LGSL+ +LLVQLKT++G TKI+KR+IQKFIEKIIIDCRFFT
Sbjct: 61  VKAATTAPKTVETKTGELDLGSLVSDLLVQLKTTLGKTKIKKREIQKFIEKIIIDCRFFT 120

Query: 121 LLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGTALV 180
           LLAV+GSLMGS+LC+IEGSFIVAESYLQYFH LSQ ++QTHTVELLIEALDMFLVGTALV
Sbjct: 121 LLAVSGSLMGSILCYIEGSFIVAESYLQYFHSLSQRTNQTHTVELLIEALDMFLVGTALV 180

Query: 181 VFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHAVMM 240
           VFG+GLFAMFVGSEKMKEKN+  +S SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMM
Sbjct: 181 VFGIGLFAMFVGSEKMKEKNQKWISRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAVMM 240

Query: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLN+G GGSGGF
Sbjct: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGEGGSGGF 291

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BLAST of CcUC08G159720 vs. NCBI nr
Match: XP_011649594.1 (uncharacterized protein LOC101218655 isoform X1 [Cucumis sativus] >KGN62563.1 hypothetical protein Csa_022577 [Cucumis sativus])

HSP 1 Score: 453.0 bits (1164), Expect = 3.4e-123
Identity = 244/293 (83.28%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATR +QR+RP +AVS+SSSSSSPSS+T VR LGKTGL+LNNGERLITS  DERRQ+V 
Sbjct: 1   MAATRFVQRVRPAAAVSASSSSSSPSSMTNVRVLGKTGLNLNNGERLITSGGDERRQLVT 60

Query: 61  VKAA---AAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCRF 120
           VKAA   AAP+TVETK+ EL+LGSL+ NLL+QLK ++G TKI+K +IQKFIEKIIIDCRF
Sbjct: 61  VKAAAATAAPKTVETKTGELDLGSLVANLLIQLKNTLGKTKIKKGEIQKFIEKIIIDCRF 120

Query: 121 FTLLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGTA 180
           FTLLAV+GSLMGS+LC+IEGSFIV ESYLQYFHGLSQ +DQTHTVELLIEALDMFLVGTA
Sbjct: 121 FTLLAVSGSLMGSILCYIEGSFIVVESYLQYFHGLSQRTDQTHTVELLIEALDMFLVGTA 180

Query: 181 LVVFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHAV 240
           L+VFG+GLFAMFVGSEKMK+KN+   S SNLFGLFYMKKIPTWVEMESMS AKSKIGHAV
Sbjct: 181 LIVFGIGLFAMFVGSEKMKDKNQKWSSRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAV 240

Query: 241 MMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           MMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLN+GGGGS GF
Sbjct: 241 MMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGSSGF 293

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BLAST of CcUC08G159720 vs. NCBI nr
Match: XP_022951147.1 (uncharacterized protein LOC111454079 [Cucurbita moschata])

HSP 1 Score: 431.8 bits (1109), Expect = 8.1e-117
Identity = 233/294 (79.25%), Postives = 263/294 (89.46%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATRL++ +RP++ V SSSSSSSPS+  TVRCLGKTGL+  NGERL+TS D ERRQIV 
Sbjct: 1   MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVN 60

Query: 61  VK----AAAAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCR 120
           +K    AAAAPETVET++ EL+LGSLL NLLVQLK +   TKI++RQIQKFIEKIIIDCR
Sbjct: 61  LKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCR 120

Query: 121 FFTLLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGT 180
           FFTL AVAGSL+GS+LCF+EGSFIVAESYLQYF+G+S+ SD++H VELLIE+LDMFLVGT
Sbjct: 121 FFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGT 180

Query: 181 ALVVFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHA 240
           ALVVFGVGLFAMFVGSEKM EKN   VSGSNLFGLFYMK IPTWVEMES+SEAKSKIGHA
Sbjct: 181 ALVVFGVGLFAMFVGSEKMTEKNPRWVSGSNLFGLFYMKNIPTWVEMESVSEAKSKIGHA 240

Query: 241 VMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           VMMILQVGVLEKFK+IPLSSA DLACFAAA+LISSASIFFLS+LN+GGGG GG+
Sbjct: 241 VMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY 294

[Close]

BLAST of CcUC08G159720 vs. ExPASy Swiss-Prot
Match: Q9SJZ6 (Mediator of RNA polymerase II transcription subunit 18 OS=Arabidopsis thaliana OX=3702 GN=MED18 PE=1 SV=1)

HSP 1 Score: 340.1 bits (871), Expect = 4.2e-92
Identity = 165/206 (80.10%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 295 QHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQAEPTWTVKHIG 354
           QHVEALEILLQG+CGV RERLR+HE+CL+SGP+LG V+SEVR+LCDL+Q EPTWTVKH+G
Sbjct: 14  QHVEALEILLQGLCGVQRERLRVHELCLRSGPNLGVVSSEVRLLCDLDQPEPTWTVKHVG 73

Query: 355 GAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAFRFHRGAHITVT 414
           GA+RGAGA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDHELL+VGFAF F R AHI+V+
Sbjct: 74  GAMRGAGADQISVLVRNMIESKVSKNALRMFYALGYKLDHELLKVGFAFHFQRTAHISVS 133

Query: 415 VSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCEYLAPLLHLSKP 474
           VSSVNKM K+H+ DEAVPVTPG+Q+V+VTAPATS+NYSEVA AVS+FCE+LAPL+HLSKP
Sbjct: 134 VSSVNKMPKVHAIDEAVPVTPGMQIVDVTAPATSENYSEVAAAVSSFCEFLAPLVHLSKP 193

Query: 475 GISTGVVPTAAAAAASLLSDGAGTTM 501
            ISTGVVPTAAAAAASL+SDG GTT+
Sbjct: 194 SISTGVVPTAAAAAASLMSDGGGTTL 219

[Close]

BLAST of CcUC08G159720 vs. ExPASy TrEMBL
Match: A0A5A7VG09 (UPF0114 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G006080 PE=4 SV=1)

HSP 1 Score: 454.9 bits (1169), Expect = 4.3e-124
Identity = 248/291 (85.22%), Postives = 270/291 (92.78%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATR MQR+RP +AVSSSSSSSSPSS+T VR LGKTGL+LNNGERLITS   E RQ+VA
Sbjct: 1   MAATRFMQRVRPAAAVSSSSSSSSPSSMTNVRVLGKTGLNLNNGERLITSGGGEGRQLVA 60

Query: 61  VKAA-AAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCRFFT 120
           VKAA  AP+TVETK+ EL+LGSL+ +LLVQLKT++G TKI+KR+IQKFIEKIIIDCRFFT
Sbjct: 61  VKAATTAPKTVETKTGELDLGSLVSDLLVQLKTTLGKTKIKKREIQKFIEKIIIDCRFFT 120

Query: 121 LLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGTALV 180
           LLAV+GSLMGS+LC+IEGSFIVAESYLQYFH LSQ ++QTHTVELLIEALDMFLVGTALV
Sbjct: 121 LLAVSGSLMGSILCYIEGSFIVAESYLQYFHSLSQRTNQTHTVELLIEALDMFLVGTALV 180

Query: 181 VFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHAVMM 240
           VFG+GLFAMFVGSEKMKEKNR  +S SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMM
Sbjct: 181 VFGIGLFAMFVGSEKMKEKNRKWISRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAVMM 240

Query: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLN+G GGSGGF
Sbjct: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGEGGSGGF 291

[Close]

BLAST of CcUC08G159720 vs. ExPASy TrEMBL
Match: A0A0A0LLC9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360800 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 244/293 (83.28%), Postives = 269/293 (91.81%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATR +QR+RP +AVS+SSSSSSPSS+T VR LGKTGL+LNNGERLITS  DERRQ+V 
Sbjct: 1   MAATRFVQRVRPAAAVSASSSSSSPSSMTNVRVLGKTGLNLNNGERLITSGGDERRQLVT 60

Query: 61  VKAA---AAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCRF 120
           VKAA   AAP+TVETK+ EL+LGSL+ NLL+QLK ++G TKI+K +IQKFIEKIIIDCRF
Sbjct: 61  VKAAAATAAPKTVETKTGELDLGSLVANLLIQLKNTLGKTKIKKGEIQKFIEKIIIDCRF 120

Query: 121 FTLLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGTA 180
           FTLLAV+GSLMGS+LC+IEGSFIV ESYLQYFHGLSQ +DQTHTVELLIEALDMFLVGTA
Sbjct: 121 FTLLAVSGSLMGSILCYIEGSFIVVESYLQYFHGLSQRTDQTHTVELLIEALDMFLVGTA 180

Query: 181 LVVFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHAV 240
           L+VFG+GLFAMFVGSEKMK+KN+   S SNLFGLFYMKKIPTWVEMESMS AKSKIGHAV
Sbjct: 181 LIVFGIGLFAMFVGSEKMKDKNQKWSSRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAV 240

Query: 241 MMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           MMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLN+GGGGS GF
Sbjct: 241 MMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGGGGSSGF 293

[Close]

BLAST of CcUC08G159720 vs. ExPASy TrEMBL
Match: A0A1S3BAX1 (uncharacterized protein LOC103487936 OS=Cucumis melo OX=3656 GN=LOC103487936 PE=4 SV=1)

HSP 1 Score: 453.0 bits (1164), Expect = 1.6e-123
Identity = 246/291 (84.54%), Postives = 270/291 (92.78%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATR MQR+RP +AVSSSSSSSSPSS+T VR LGKTGL+LNNGERLITS   E RQ++A
Sbjct: 1   MAATRFMQRVRPAAAVSSSSSSSSPSSMTNVRVLGKTGLNLNNGERLITSGGGEGRQLIA 60

Query: 61  VKAA-AAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCRFFT 120
           VKAA  AP+TVETK+ EL+LGSL+ +LLVQLKT++G TKI+KR+IQKFIEKIIIDCRFFT
Sbjct: 61  VKAATTAPKTVETKTGELDLGSLVSDLLVQLKTTLGKTKIKKREIQKFIEKIIIDCRFFT 120

Query: 121 LLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGTALV 180
           LLAV+GSLMGS+LC+IEGSFIVAESYLQYFH LSQ ++QTHTVELLIEALDMFLVGTALV
Sbjct: 121 LLAVSGSLMGSILCYIEGSFIVAESYLQYFHSLSQRTNQTHTVELLIEALDMFLVGTALV 180

Query: 181 VFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHAVMM 240
           VFG+GLFAMFVGSEKMKEKN+  +S SNLFGLFYMKKIPTWVEMESMS AKSKIGHAVMM
Sbjct: 181 VFGIGLFAMFVGSEKMKEKNQKWISRSNLFGLFYMKKIPTWVEMESMSAAKSKIGHAVMM 240

Query: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLN+G GGSGGF
Sbjct: 241 ILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNVGEGGSGGF 291

[Close]

BLAST of CcUC08G159720 vs. ExPASy TrEMBL
Match: A0A6J1GGV4 (uncharacterized protein LOC111454079 OS=Cucurbita moschata OX=3662 GN=LOC111454079 PE=4 SV=1)

HSP 1 Score: 431.8 bits (1109), Expect = 3.9e-117
Identity = 233/294 (79.25%), Postives = 263/294 (89.46%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATRL++ +RP++ V SSSSSSSPS+  TVRCLGKTGL+  NGERL+TS D ERRQIV 
Sbjct: 1   MAATRLLRSVRPSATVVSSSSSSSPSTAATVRCLGKTGLNSKNGERLVTSGDGERRQIVN 60

Query: 61  VK----AAAAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDCR 120
           +K    AAAAPETVET++ EL+LGSLL NLLVQLK +   TKI++RQIQKFIEKIIIDCR
Sbjct: 61  LKAAAAAAAAPETVETETRELDLGSLLANLLVQLKNTAVKTKIRRRQIQKFIEKIIIDCR 120

Query: 121 FFTLLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVGT 180
           FFTL AVAGSL+GS+LCF+EGSFIVAESYLQYF+G+S+ SD++H VELLIE+LDMFLVGT
Sbjct: 121 FFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNGVSRRSDESHAVELLIESLDMFLVGT 180

Query: 181 ALVVFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGHA 240
           ALVVFGVGLFAMFVGSEKM EKN   VSGSNLFGLFYMK IPTWVEMES+SEAKSKIGHA
Sbjct: 181 ALVVFGVGLFAMFVGSEKMTEKNPRWVSGSNLFGLFYMKNIPTWVEMESVSEAKSKIGHA 240

Query: 241 VMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           VMMILQVGVLEKFK+IPLSSA DLACFAAA+LISSASIFFLS+LN+GGGG GG+
Sbjct: 241 VMMILQVGVLEKFKSIPLSSATDLACFAAAILISSASIFFLSRLNIGGGGRGGY 294

[Close]

BLAST of CcUC08G159720 vs. ExPASy TrEMBL
Match: A0A6J1KI88 (uncharacterized protein LOC111496020 OS=Cucurbita maxima OX=3661 GN=LOC111496020 PE=4 SV=1)

HSP 1 Score: 408.7 bits (1049), Expect = 3.5e-110
Identity = 227/295 (76.95%), Postives = 254/295 (86.10%), Query Frame = 0


Query: 1   MTATRLMQRLRPTSAVSSSSSSSSPSSLTTVRCLGKTGLSLNNGERLITSKDDERRQIVA 60
           M ATRL++ +RP SA   SSSSSSPS+   VRCL KTGL+  NGERLITS D ERRQIV 
Sbjct: 1   MAATRLLRSVRP-SATVVSSSSSSPSTAANVRCLVKTGLNSKNGERLITSGDGERRQIVN 60

Query: 61  VK-----AAAAPETVETKSEELNLGSLLVNLLVQLKTSVGNTKIQKRQIQKFIEKIIIDC 120
           +K     AAAAPETVETK+ EL+LGSLL NLLVQLK +    KI++RQIQKFIEKIII+C
Sbjct: 61  LKAAAAAAAAAPETVETKTRELDLGSLLANLLVQLKNTAVKKKIRRRQIQKFIEKIIINC 120

Query: 121 RFFTLLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVELLIEALDMFLVG 180
           RFFTL AVAGSL+GS+LCF+EGSFIVAESYLQYF+ +S+ SD++H VELLIE+LDMFLVG
Sbjct: 121 RFFTLFAVAGSLLGSILCFLEGSFIVAESYLQYFNSVSRRSDESHAVELLIESLDMFLVG 180

Query: 181 TALVVFGVGLFAMFVGSEKMKEKNRPVVSGSNLFGLFYMKKIPTWVEMESMSEAKSKIGH 240
           TALVVFGVGLFAMFVGSEKM EKNR  VSGSNLFGLFYMK IPTWVEMES+SEAKSKIGH
Sbjct: 181 TALVVFGVGLFAMFVGSEKMTEKNRRWVSGSNLFGLFYMKNIPTWVEMESVSEAKSKIGH 240

Query: 241 AVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLNMGGGGSGGF 291
           AVMMILQVGVLEK K+IPLSSA DLACFAAA+LI SASIFFLS+LN+GGG   G+
Sbjct: 241 AVMMILQVGVLEKLKSIPLSSAADLACFAAAILIFSASIFFLSRLNIGGGSRDGY 294

[Close]

BLAST of CcUC08G159720 vs. TAIR 10
Match: AT2G22370.1 (unknown protein; Has 127 Blast hits to 127 proteins in 48 species: Archae - 0; Bacteria - 0; Metazoa - 87; Fungi - 0; Plants - 39; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). )

HSP 1 Score: 340.1 bits (871), Expect = 3.0e-93
Identity = 165/206 (80.10%), Postives = 193/206 (93.69%), Query Frame = 0


Query: 295 QHVEALEILLQGICGVPRERLRLHEICLKSGPSLGAVASEVRILCDLEQAEPTWTVKHIG 354
           QHVEALEILLQG+CGV RERLR+HE+CL+SGP+LG V+SEVR+LCDL+Q EPTWTVKH+G
Sbjct: 14  QHVEALEILLQGLCGVQRERLRVHELCLRSGPNLGVVSSEVRLLCDLDQPEPTWTVKHVG 73

Query: 355 GAIRGAGAEQLSVLVRTMVESKVSKNVLRLFYALGYKLDHELLRVGFAFRFHRGAHITVT 414
           GA+RGAGA+Q+SVLVR M+ESKVSKN LR+FYALGYKLDHELL+VGFAF F R AHI+V+
Sbjct: 74  GAMRGAGADQISVLVRNMIESKVSKNALRMFYALGYKLDHELLKVGFAFHFQRTAHISVS 133

Query: 415 VSSVNKMLKLHSTDEAVPVTPGIQLVEVTAPATSDNYSEVAGAVSTFCEYLAPLLHLSKP 474
           VSSVNKM K+H+ DEAVPVTPG+Q+V+VTAPATS+NYSEVA AVS+FCE+LAPL+HLSKP
Sbjct: 134 VSSVNKMPKVHAIDEAVPVTPGMQIVDVTAPATSENYSEVAAAVSSFCEFLAPLVHLSKP 193

Query: 475 GISTGVVPTAAAAAASLLSDGAGTTM 501
            ISTGVVPTAAAAAASL+SDG GTT+
Sbjct: 194 SISTGVVPTAAAAAASLMSDGGGTTL 219

[Close]

BLAST of CcUC08G159720 vs. TAIR 10
Match: AT4G19390.1 (Uncharacterised protein family (UPF0114) )

HSP 1 Score: 153.3 bits (386), Expect = 5.2e-37
Identity = 75/180 (41.67%), Postives = 126/180 (70.00%), Query Frame = 0


Query: 104 IQKFIEKIIIDCRFFTLLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHTVE 163
           +++ IEK+I  CRF T L   GSL+GSVLCFI+G   V +S+LQY      S ++   + 
Sbjct: 97  LEEGIEKVIYSCRFMTFLGTLGSLLGSVLCFIKGCMYVVDSFLQY------SVNRGKVIF 156

Query: 164 LLIEALDMFLVGTALVVFGVGLFAMFVGS-EKMKEKNRPVVSG-SNLFGLFYMKKIPTWV 223
           LL+EA+D++L+GT ++VFG+GL+ +F+ + +  + +   +VS  S+LFG+F +K+ P W+
Sbjct: 157 LLVEAIDIYLLGTVMLVFGLGLYELFISNLDTSESRTHDIVSNRSSLFGMFTLKERPQWL 216

Query: 224 EMESMSEAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSKLN 282
           E++S+SE K+K+GH ++M+L +G+ +K K + ++S  DL C + ++  SSA +F LS+LN
Sbjct: 217 EVKSVSELKTKLGHVIVMLLLIGLFDKSKRVVITSVTDLLCISVSIFFSSACLFLLSRLN 270

[Close]

BLAST of CcUC08G159720 vs. TAIR 10
Match: AT5G13720.1 (Uncharacterised protein family (UPF0114) )

HSP 1 Score: 134.4 bits (337), Expect = 2.5e-31
Identity = 66/184 (35.87%), Postives = 115/184 (62.50%), Query Frame = 0


Query: 102 RQIQKFIEKIIIDCRFFTLLAVAGSLMGSVLCFIEGSFIVAESYLQYFHGLSQSSDQTHT 161
           R  +  +E+II D RF  LLAV GSL GS+LCF+ G   + E+Y  Y+   S+       
Sbjct: 77  RSTESNVERIIFDFRFLALLAVGGSLAGSLLCFLNGCVYIVEAYKVYWTNCSKGIHTGQM 136

Query: 162 VELLIEALDMFLVGTALVVFGVGLFAMFV--GSEKMKEKNRPVVSGSNLFGLFYMKKIPT 221
           V  L+EA+D++L GT +++F +GL+ +F+      +  ++   +  S+LFG+F MK+ P 
Sbjct: 137 VLRLVEAIDVYLAGTVMLIFSMGLYGLFISHSPHDVPPESDRALRSSSLFGMFAMKERPK 196

Query: 222 WVEMESMSEAKSKIGHAVMMILQVGVLEKFKNIPLSSAVDLACFAAAVLISSASIFFLSK 281
           W+++ S+ E K+K+GH ++MIL V + E+ K + +++ +DL  ++  + +SSAS++ L  
Sbjct: 197 WMKISSLDELKTKVGHVIVMILLVKMFERSKMVTIATGLDLLSYSVCIFLSSASLYILHN 256

Query: 282 LNMG 284
           L+ G
Sbjct: 257 LHKG 260

The following BLAST results are available for this feature:

BLAST of CcUC08G159720 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885641.1	4.3e-134	89.66	uncharacterized protein LOC120075956 [Benincasa hispida]	[more]
KAA0065266.1	8.9e-124	85.22	UPF0114 domain-containing protein [Cucumis melo var. makuwa]	[more]
XP_008444667.1	3.4e-123	84.54	PREDICTED: uncharacterized protein LOC103487936 [Cucumis melo]	[more]
XP_011649594.1	3.4e-123	83.28	uncharacterized protein LOC101218655 isoform X1 [Cucumis sativus] >KGN62563.1 hy...	[more]
XP_022951147.1	8.1e-117	79.25	uncharacterized protein LOC111454079 [Cucurbita moschata]	[more]

BLAST of CcUC08G159720 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SJZ6	4.2e-92	80.10	Mediator of RNA polymerase II transcription subunit 18 OS=Arabidopsis thaliana O...	[more]

BLAST of CcUC08G159720 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VG09	4.3e-124	85.22	UPF0114 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C2...	[more]
A0A0A0LLC9	1.6e-123	83.28	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G360800 PE=4 SV=1	[more]
A0A1S3BAX1	1.6e-123	84.54	uncharacterized protein LOC103487936 OS=Cucumis melo OX=3656 GN=LOC103487936 PE=...	[more]
A0A6J1GGV4	3.9e-117	79.25	uncharacterized protein LOC111454079 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1KI88	3.5e-110	76.95	uncharacterized protein LOC111496020 OS=Cucurbita maxima OX=3661 GN=LOC111496020...	[more]

BLAST of CcUC08G159720 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G22370.1	3.0e-93	80.10	unknown protein; Has 127 Blast hits to 127 proteins in 48 species: Archae - 0; B...	[more]
AT4G19390.1	5.2e-37	41.67	Uncharacterised protein family (UPF0114)	[more]
AT5G13720.1	2.5e-31	35.87	Uncharacterised protein family (UPF0114)	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.40.320.10		coord: 294..473 e-value: 4.2E-10 score: 41.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	PANTHER	PTHR31721	OS06G0710300 PROTEIN	coord: 1..283
None	No IPR available	PANTHER	PTHR31721:SF3	EXPRESSED PROTEIN	coord: 1..283
IPR005134	Uncharacterised protein family UPF0114	PFAM	PF03350	UPF0114	coord: 112..249 e-value: 1.7E-30 score: 105.6

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G159720.1	CcUC08G159720.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006369	termination of RNA polymerase II transcription
cellular_component	GO:0070847	core mediator complex
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016592	mediator complex
molecular_function	GO:0003712	transcription coregulator activity