CcUC08G159430 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G159430
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Zinc finger and BTB domain-containing protein 47
Location	CicolChr08: 27520592 .. 27520939 (+)
RNA-Seq Expression	CcUC08G159430
Synteny	CcUC08G159430

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTAAGAAGAAAACCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAATTTAGCCGATGATGGTATTGGCCAGTCGATACAGCCCAGGAAAAGGGGCCGACCTCGTAAGGTTCTTGATGAACCACAAAACAAAGATGAGAACAAGAAACTGCCGCCGCCGCTGCTGCCGGAAGTTGCAGAGAATCCACCGGAGAAGAAAGCTAAAACCACCGTAGATGAACCGCCGCCGGGTTCCATGGAAGAAGGTTCAAAACAAGAAGAACGCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAA

mRNA sequence

ATGGGTAAGAAGAAAACCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAATTTAGCCGATGATGGTATTGGCCAGTCGATACAGCCCAGGAAAAGGGGCCGACCTCGTAAGGTTCTTGATGAACCACAAAACAAAGATGAGAACAAGAAACTGCCGCCGCCGCTGCTGCCGGAAGTTGCAGAGAATCCACCGGAGAAGAAAGCTAAAACCACCGTAGATGAACCGCCGCCGGGTTCCATGGAAGAAGGTTCAAAACAAGAAGAACGCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAA

Coding sequence (CDS)

ATGGGTAAGAAGAAAACCCAGAAAACTAAGGAGATTGCAGTCGCCATAGCTGAAACCTCCACCTCCAATTTAGCCGATGATGGTATTGGCCAGTCGATACAGCCCAGGAAAAGGGGCCGACCTCGTAAGGTTCTTGATGAACCACAAAACAAAGATGAGAACAAGAAACTGCCGCCGCCGCTGCTGCCGGAAGTTGCAGAGAATCCACCGGAGAAGAAAGCTAAAACCACCGTAGATGAACCGCCGCCGGGTTCCATGGAAGAAGGTTCAAAACAAGAAGAACGCAAAACAGGGGATGGTTCGAGAAGCAGAGGAAGGCGAAAGAACAAACCCAGAAAAAGTAGCTAA

Protein sequence

MGKKKTQKTKEIAVAIAETSTSNLADDGIGQSIQPRKRGRPRKVLDEPQNKDENKKLPPPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS

Homology

[Close]

BLAST of CcUC08G159430 vs. NCBI nr
Match: XP_038884964.1 (uncharacterized protein LOC120075548 [Benincasa hispida])

HSP 1 Score: 184.9 bits (468), Expect = 4.0e-43
Identity = 106/115 (92.17%), Postives = 107/115 (93.04%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADDGIGQSIQPRKRGRPRKVLDEPQNKDENKKLPPP 60
           MGKKK QKTKEIAVAIAETS S LADDGIGQSIQPRKRGRPRKVLDEPQNK ENKKL PP
Sbjct: 1   MGKKKPQKTKEIAVAIAETSASKLADDGIGQSIQPRKRGRPRKVLDEPQNKQENKKLLPP 60

Query: 61  LLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 116
            LPEVAENPPEKKAKTTVD+PPPGSMEEGSKQ E KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  -LPEVAENPPEKKAKTTVDQPPPGSMEEGSKQGEPKTGDGSRSRGRRKNKPRKSS 114

[Close]

BLAST of CcUC08G159430 vs. NCBI nr
Match: KAA0065239.1 (zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa])

HSP 1 Score: 184.5 bits (467), Expect = 5.2e-43
Identity = 105/117 (89.74%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADDGIGQSIQPRKRGRPRKVLDEPQNKDENKKL--P 60
           MGKKKTQKTKEIAVAIAETSTS LADDGIGQSIQPRKRGRPRKVLDE QN+ ENKKL  P
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEQQNEQENKKLPPP 60

Query: 61  PPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 116
           PPLLPEV ENPPEKK K TVDEPPPGS++EGSKQEE KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PPLLPEVEENPPEKKIKATVDEPPPGSVKEGSKQEEPKTGDGSRSRGRRKNKPRKSS 117

[Close]

BLAST of CcUC08G159430 vs. NCBI nr
Match: KGN62596.1 (hypothetical protein Csa_022088 [Cucumis sativus])

HSP 1 Score: 160.2 bits (404), Expect = 1.0e-35
Identity = 98/116 (84.48%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADDG-IGQSIQPRKRGRPRKVLDEPQNKDENKKLPP 60
           MGKKKTQKTKEIAVAIAETSTS LADDG IGQ IQPRKRGRPRKVL+E QN+ E+KK PP
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP 60

Query: 61  PLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 116
           PLL EVAENPPEKK K TVDE   GSM EGSK+EE KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PLL-EVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS 115

[Close]

BLAST of CcUC08G159430 vs. NCBI nr
Match: KAG7020516.1 (hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 125.9 bits (315), Expect = 2.2e-25
Identity = 86/122 (70.49%), Postives = 96/122 (78.69%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADD----GIGQSIQPRKRGRPRKVLDEPQNKDENKK 60
           MGKKKTQKTK+I+VAIAETSTS L DD    G GQS+QPRKRGRPRKVLDEP    ++KK
Sbjct: 1   MGKKKTQKTKQISVAIAETSTSKLPDDGGAHGGGQSVQPRKRGRPRKVLDEP---PDDKK 60

Query: 61  LPPPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQ---EERKTGDGSRSRGRRKNKPRK 116
           LPPP   +VA+ P +KK K+T DE PP SME  SKQ   EE K+GDGSRSRGRRKNKPRK
Sbjct: 61  LPPP-PADVADKPLQKKGKSTGDE-PPDSMEGASKQHESEEPKSGDGSRSRGRRKNKPRK 117

[Close]

BLAST of CcUC08G159430 vs. NCBI nr
Match: XP_023002541.1 (uncharacterized protein LOC111496353 [Cucurbita maxima])

HSP 1 Score: 124.8 bits (312), Expect = 4.9e-25
Identity = 86/122 (70.49%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADD----GIGQSIQPRKRGRPRKVLDEPQNKDENKK 60
           MGKKKTQKTK+I+VAIAETSTS L DD    G GQS QPRKRGRPRKVLDEP    ++KK
Sbjct: 33  MGKKKTQKTKQISVAIAETSTSKLPDDGGGHGGGQSEQPRKRGRPRKVLDEP---PDDKK 92

Query: 61  LPPPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQ---EERKTGDGSRSRGRRKNKPRK 116
           L PP   +VA+ P +KK KTT DEPP  SME  SKQ   EE K+GDGSRSRGRRKNKPRK
Sbjct: 93  LLPPPAADVADKPLQKKGKTTGDEPPI-SMEGASKQQESEEPKSGDGSRSRGRRKNKPRK 150

[Close]

BLAST of CcUC08G159430 vs. ExPASy TrEMBL
Match: A0A5A7VIE6 (Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G005800 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 2.5e-43
Identity = 105/117 (89.74%), Postives = 108/117 (92.31%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADDGIGQSIQPRKRGRPRKVLDEPQNKDENKKL--P 60
           MGKKKTQKTKEIAVAIAETSTS LADDGIGQSIQPRKRGRPRKVLDE QN+ ENKKL  P
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIGQSIQPRKRGRPRKVLDEQQNEQENKKLPPP 60

Query: 61  PPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 116
           PPLLPEV ENPPEKK K TVDEPPPGS++EGSKQEE KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PPLLPEVEENPPEKKIKATVDEPPPGSVKEGSKQEEPKTGDGSRSRGRRKNKPRKSS 117

[Close]

BLAST of CcUC08G159430 vs. ExPASy TrEMBL
Match: A0A0A0LRH2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1)

HSP 1 Score: 160.2 bits (404), Expect = 5.1e-36
Identity = 98/116 (84.48%), Postives = 102/116 (87.93%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADDG-IGQSIQPRKRGRPRKVLDEPQNKDENKKLPP 60
           MGKKKTQKTKEIAVAIAETSTS LADDG IGQ IQPRKRGRPRKVL+E QN+ E+KK PP
Sbjct: 1   MGKKKTQKTKEIAVAIAETSTSKLADDGIIGQPIQPRKRGRPRKVLEEQQNEQESKKPPP 60

Query: 61  PLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQEERKTGDGSRSRGRRKNKPRKSS 116
           PLL EVAENPPEKK K TVDE   GSM EGSK+EE KTGDGSRSRGRRKNKPRKSS
Sbjct: 61  PLL-EVAENPPEKKIKGTVDEAALGSMIEGSKEEEPKTGDGSRSRGRRKNKPRKSS 115

[Close]

BLAST of CcUC08G159430 vs. ExPASy TrEMBL
Match: A0A6J1KLK8 (uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 2.4e-25
Identity = 86/122 (70.49%), Postives = 94/122 (77.05%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADD----GIGQSIQPRKRGRPRKVLDEPQNKDENKK 60
           MGKKKTQKTK+I+VAIAETSTS L DD    G GQS QPRKRGRPRKVLDEP    ++KK
Sbjct: 33  MGKKKTQKTKQISVAIAETSTSKLPDDGGGHGGGQSEQPRKRGRPRKVLDEP---PDDKK 92

Query: 61  LPPPLLPEVAENPPEKKAKTTVDEPPPGSMEEGSKQ---EERKTGDGSRSRGRRKNKPRK 116
           L PP   +VA+ P +KK KTT DEPP  SME  SKQ   EE K+GDGSRSRGRRKNKPRK
Sbjct: 93  LLPPPAADVADKPLQKKGKTTGDEPPI-SMEGASKQQESEEPKSGDGSRSRGRRKNKPRK 150

[Close]

BLAST of CcUC08G159430 vs. ExPASy TrEMBL
Match: A0A251R9L0 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G379600 PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06
Identity = 58/137 (42.34%), Postives = 76/137 (55.47%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADDGIGQS----IQPRKRGRPRKVLDEPQNKDENKK 60
           MGKKK QKTKE++VAIAE  ++   D+G  QS      PRKRGRPRK++++ ++ +E   
Sbjct: 1   MGKKKPQKTKELSVAIAEAPST--GDEGQQQSQPQPHTPRKRGRPRKIIEKTESTEEQST 60

Query: 61  LPPPLLPEVAENPPE--KKAKTTVD----------------EPPPGSMEEGSKQEERKTG 116
                    AE+  E  KKAK T D                EP   S+  G+K+EE +  
Sbjct: 61  PQTEEAAAAAEDVEEQSKKAKATEDEDQQEEEQQEQPKIKEEPSSASVRGGAKKEEGQAR 120

[Close]

BLAST of CcUC08G159430 vs. ExPASy TrEMBL
Match: A0A314ZHL5 (Neuromodulin OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_07055 PE=4 SV=1)

HSP 1 Score: 62.0 bits (149), Expect = 1.9e-06
Identity = 58/138 (42.03%), Postives = 76/138 (55.07%), Query Frame = 0


Query: 1   MGKKKTQKTKEIAVAIAETSTSNLADDGIGQS----IQPRKRGRPRKVLDEPQNKDENKK 60
           MGKKK QKTKE++VAIAE  ++   D+G  QS      PRKRGRPRK++++ ++ +E   
Sbjct: 1   MGKKKPQKTKELSVAIAEAPST--GDEGQQQSQPQPHTPRKRGRPRKIIEKTESTEEQST 60

Query: 61  LPPPLLPEVAENPPE--KKAKTTVD-----------------EPPPGSMEEGSKQEERKT 116
                    AE+  E  KKAK T D                 EP   S+  G+K+EE + 
Sbjct: 61  PQTEEAAAAAEDVEEQSKKAKATEDEDQQQEEQQEQPKIKEEEPSSASVRGGAKKEEGQA 120

The following BLAST results are available for this feature:

BLAST of CcUC08G159430 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884964.1	4.0e-43	92.17	uncharacterized protein LOC120075548 [Benincasa hispida]	[more]
KAA0065239.1	5.2e-43	89.74	zinc finger and BTB domain-containing protein 47 [Cucumis melo var. makuwa]	[more]
KGN62596.1	1.0e-35	84.48	hypothetical protein Csa_022088 [Cucumis sativus]	[more]
KAG7020516.1	2.2e-25	70.49	hypothetical protein SDJN02_17201, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_023002541.1	4.9e-25	70.49	uncharacterized protein LOC111496353 [Cucurbita maxima]	[more]

BLAST of CcUC08G159430 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC08G159430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VIE6	2.5e-43	89.74	Zinc finger and BTB domain-containing protein 47 OS=Cucumis melo var. makuwa OX=...	[more]
A0A0A0LRH2	5.1e-36	84.48	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G361610 PE=4 SV=1	[more]
A0A6J1KLK8	2.4e-25	70.49	uncharacterized protein LOC111496353 OS=Cucurbita maxima OX=3661 GN=LOC111496353...	[more]
A0A251R9L0	1.4e-06	42.34	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G379600 PE=4 SV=1	[more]
A0A314ZHL5	1.9e-06	42.03	Neuromodulin OS=Prunus yedoensis var. nudiflora OX=2094558 GN=Pyn_07055 PE=4 SV=...	[more]

BLAST of CcUC08G159430 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 39..58
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 86..101
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..115
None	No IPR available	PANTHER	PTHR37615	NUCLEOPORIN NUP159-LIKE	coord: 1..115

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G159430.1	CcUC08G159430.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane