CcUC08G158490 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G158490
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSec-independent protein translocase protein TATC
LocationCicolChr08: 26701716 .. 26702562 (-)
RNA-Seq ExpressionCcUC08G158490
SyntenyCcUC08G158490
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTGCTGAAAATCCCATCATCCATTCTTTGGATCAATCAAATATATACATTTTTCTAACTTTTCTCGATTCTGGATTGTATTTATTTCTGGTTTGCAAAAAAACCCACTTTTTTTTTTTCCGTTCAAATCCATACGAAATTCTTCACAATTTAATCTTTTCGTTTCAATTGGGACTCTGTTTTTGTTTTTCCCTGTTAACTGTATGATCTTTGTTTTTGATTTTGATTGAGTTTGAATTTTCCAGGTTCAGATCTTTGTAAAGTGCAGCAATGGAAGCAGTTTCGATTCCATTTTCTGCTGATCAATCTCGTAGTTTTAAACCTCAAACTTCCTCTCCGGCCACCGTCCACGGCGGTCTTCTCAACCTCCCTCCGCCGGCCGTCCCTTATTTCAGTCACCGCCATAATAACCAGCAACCGCCTCTCCTCCCTTTGCCCCGCCGTCCATTTCCCCGTCCAGAAAACGGAGCCACGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCAATCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCAACGGCGGTGAAATCGACGGTGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAGAGTTTTAGGACTACGGTCGTCGGCGGAGATGGAGTTTTCGGGGTCGGCATTCAGCATTTCGCCGCCGCCGAGTAGTGTTCCACTTCCGAAATTCTCTCTGAGGCAGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA

mRNA sequence

ATGGCAATGGAAGCAGTTTCGATTCCATTTTCTGCTGATCAATCTCGTAGTTTTAAACCTCAAACTTCCTCTCCGGCCACCGTCCACGGCGGTCTTCTCAACCTCCCTCCGCCGGCCGTCCCTTATTTCAGTCACCGCCATAATAACCAGCAACCGCCTCTCCTCCCTTTGCCCCGCCGTCCATTTCCCCGTCCAGAAAACGGAGCCACGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCAATCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCAACGGCGGTGAAATCGACGGTGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAGAGTTTTAGGACTACGGTCGTCGGCGGAGATGGAGTTTTCGGGGTCGGCATTCAGCATTTCGCCGCCGCCGAGTAGTGTTCCACTTCCGAAATTCTCTCTGAGGCAGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA

Coding sequence (CDS)

ATGGCAATGGAAGCAGTTTCGATTCCATTTTCTGCTGATCAATCTCGTAGTTTTAAACCTCAAACTTCCTCTCCGGCCACCGTCCACGGCGGTCTTCTCAACCTCCCTCCGCCGGCCGTCCCTTATTTCAGTCACCGCCATAATAACCAGCAACCGCCTCTCCTCCCTTTGCCCCGCCGTCCATTTCCCCGTCCAGAAAACGGAGCCACGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCAATCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCAACGGCGGTGAAATCGACGGTGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAGAGTTTTAGGACTACGGTCGTCGGCGGAGATGGAGTTTTCGGGGTCGGCATTCAGCATTTCGCCGCCGCCGAGTAGTGTTCCACTTCCGAAATTCTCTCTGAGGCAGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA

Protein sequence

MAMEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPFPRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAEMEFSGSAFSISPPPSSVPLPKFSLRQKVVSCNVEAAGVDAGATDNLRRLLRLR
Homology
BLAST of CcUC08G158490 vs. NCBI nr
Match: XP_038884839.1 (uncharacterized protein LOC120075485 [Benincasa hispida])

HSP 1 Score: 310.8 bits (795), Expect = 8.0e-81
Identity = 168/204 (82.35%), Postives = 175/204 (85.78%), Query Frame = 0

Query: 3   MEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPF 62
           MEAV +PFS  +SRSF PQ  SPATVHGGL N PPPAV YFSHRH +QQPPLLPLPRRPF
Sbjct: 1   MEAVLVPFS--ESRSFNPQNFSPATVHGGLFNFPPPAVTYFSHRH-HQQPPLLPLPRRPF 60

Query: 63  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSK-GPTAVKSTVEFVIVDSTNRLGPEP 122
           P PE GATAFCRPK  KSRDQSLTPKKSKPIKRSK GP AVKSTVEFVIVDSTNRLGPEP
Sbjct: 61  PPPETGATAFCRPK-CKSRDQSLTPKKSKPIKRSKGGPPAVKSTVEFVIVDSTNRLGPEP 120

Query: 123 SHVPKDLWRVLGLRSS-------------AEMEFSGSAFSISPPPSSVPLPKFSLRQKVV 182
           SHVPKDLW+VLGL+SS             AEMEFSGSAFS+SPPPSSVPLPKFSLR+KVV
Sbjct: 121 SHVPKDLWKVLGLQSSAPPCEGSRSLGTAAEMEFSGSAFSVSPPPSSVPLPKFSLRRKVV 180

Query: 183 SCNVEAAGVDAGATDNLRRLLRLR 193
           SCNVEAAGVDAGATDNLRRLLRLR
Sbjct: 181 SCNVEAAGVDAGATDNLRRLLRLR 200

BLAST of CcUC08G158490 vs. NCBI nr
Match: XP_023546813.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 292.0 bits (746), Expect = 3.8e-75
Identity = 155/199 (77.89%), Postives = 167/199 (83.92%), Query Frame = 0

Query: 3   MEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPF 62
           MEAV IPFSA++SRS K    SPATVH GLLN+PPPAVP +SHRH +QQPPLLPLPRRPF
Sbjct: 1   MEAVLIPFSAERSRSLKSCNFSPATVHDGLLNVPPPAVPNYSHRH-HQQPPLLPLPRRPF 60

Query: 63  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPS 122
           P    GA   CRPKG KSRDQSLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPS
Sbjct: 61  PPTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPS 120

Query: 123 HVPKDLWRVLGLRSSA---------EMEFSGSAFSISPPPSSVPLPKFSLRQKVVSCNVE 182
           HVPKDLWRVLGLRSSA         E EFSGS F +SPPPSSVPLPKF+LR++ VSCNVE
Sbjct: 121 HVPKDLWRVLGLRSSAPPREGGRSFETEFSGSGFGVSPPPSSVPLPKFNLRRE-VSCNVE 180

Query: 183 AAGVDAGATDNLRRLLRLR 193
           AAGVDAGATDNLRRLLRLR
Sbjct: 181 AAGVDAGATDNLRRLLRLR 197

BLAST of CcUC08G158490 vs. NCBI nr
Match: XP_022997633.1 (uncharacterized protein LOC111492508 [Cucurbita maxima])

HSP 1 Score: 290.0 bits (741), Expect = 1.5e-74
Identity = 153/199 (76.88%), Postives = 167/199 (83.92%), Query Frame = 0

Query: 3   MEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPF 62
           MEAV IPFSA++SRS K +  SPATVH G+LN+PPPAVP +SHRH +QQPPLLPLP RPF
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVHDGVLNIPPPAVPNYSHRH-HQQPPLLPLPGRPF 60

Query: 63  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPS 122
           P    G    CRPKG KSRDQSLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPS
Sbjct: 61  PPTAVGVPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPS 120

Query: 123 HVPKDLWRVLGLRSSA---------EMEFSGSAFSISPPPSSVPLPKFSLRQKVVSCNVE 182
           HVPKDLWRVLGLRSSA         E EFSGSAF +SPPPSSVPLPKF+LR++ VSCNVE
Sbjct: 121 HVPKDLWRVLGLRSSAPPREGGRSFETEFSGSAFGVSPPPSSVPLPKFTLRRE-VSCNVE 180

Query: 183 AAGVDAGATDNLRRLLRLR 193
           AAGVDAGATDNLRRLLRLR
Sbjct: 181 AAGVDAGATDNLRRLLRLR 197

BLAST of CcUC08G158490 vs. NCBI nr
Match: XP_022962625.1 (uncharacterized protein LOC111463019 [Cucurbita moschata])

HSP 1 Score: 285.4 bits (729), Expect = 3.6e-73
Identity = 152/199 (76.38%), Postives = 165/199 (82.91%), Query Frame = 0

Query: 3   MEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPF 62
           ME V IPFSA++SRS K +   PATVH GLLN+PPPAVP +SHR   QQPPLLPLPRRPF
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHR-LRQQPPLLPLPRRPF 60

Query: 63  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPS 122
           P    GA   CRPKG KSRDQSLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPS
Sbjct: 61  PPTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPS 120

Query: 123 HVPKDLWRVLGLRSSA---------EMEFSGSAFSISPPPSSVPLPKFSLRQKVVSCNVE 182
           HVPKDLWRVLGLRSSA         E EFSGSAF +SPPPSSVPLPKF+LR++ +SCNVE
Sbjct: 121 HVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSSVPLPKFTLRRE-MSCNVE 180

Query: 183 AAGVDAGATDNLRRLLRLR 193
           AAGVDAGATDNLRRLLRLR
Sbjct: 181 AAGVDAGATDNLRRLLRLR 197

BLAST of CcUC08G158490 vs. NCBI nr
Match: KAG7029446.1 (hypothetical protein SDJN02_07785, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 282.7 bits (722), Expect = 2.3e-72
Identity = 151/199 (75.88%), Postives = 163/199 (81.91%), Query Frame = 0

Query: 3   MEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPF 62
           ME V IPFSA++SRS K +   PATVH GLLN+PPPAVP +SHR   QQPPLLPLPRRPF
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHR-IRQQPPLLPLPRRPF 60

Query: 63  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPS 122
           P    G    CRPKG KSRDQSLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPS
Sbjct: 61  PPTAVGPLPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPS 120

Query: 123 HVPKDLWRVLGLRSSA---------EMEFSGSAFSISPPPSSVPLPKFSLRQKVVSCNVE 182
           HVPKDLWRVLGLRSSA         E EFSGSAF +SPPPS VPLPKF+LR++ VSCNVE
Sbjct: 121 HVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSCVPLPKFTLRRE-VSCNVE 180

Query: 183 AAGVDAGATDNLRRLLRLR 193
           AAGVDAGATDNLRRLLRLR
Sbjct: 181 AAGVDAGATDNLRRLLRLR 197

BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A6J1KEH8 (uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508 PE=4 SV=1)

HSP 1 Score: 290.0 bits (741), Expect = 7.1e-75
Identity = 153/199 (76.88%), Postives = 167/199 (83.92%), Query Frame = 0

Query: 3   MEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPF 62
           MEAV IPFSA++SRS K +  SPATVH G+LN+PPPAVP +SHRH +QQPPLLPLP RPF
Sbjct: 1   MEAVLIPFSAERSRSLKSRNFSPATVHDGVLNIPPPAVPNYSHRH-HQQPPLLPLPGRPF 60

Query: 63  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPS 122
           P    G    CRPKG KSRDQSLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPS
Sbjct: 61  PPTAVGVPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPS 120

Query: 123 HVPKDLWRVLGLRSSA---------EMEFSGSAFSISPPPSSVPLPKFSLRQKVVSCNVE 182
           HVPKDLWRVLGLRSSA         E EFSGSAF +SPPPSSVPLPKF+LR++ VSCNVE
Sbjct: 121 HVPKDLWRVLGLRSSAPPREGGRSFETEFSGSAFGVSPPPSSVPLPKFTLRRE-VSCNVE 180

Query: 183 AAGVDAGATDNLRRLLRLR 193
           AAGVDAGATDNLRRLLRLR
Sbjct: 181 AAGVDAGATDNLRRLLRLR 197

BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A6J1HFM4 (uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC111463019 PE=4 SV=1)

HSP 1 Score: 285.4 bits (729), Expect = 1.7e-73
Identity = 152/199 (76.38%), Postives = 165/199 (82.91%), Query Frame = 0

Query: 3   MEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPF 62
           ME V IPFSA++SRS K +   PATVH GLLN+PPPAVP +SHR   QQPPLLPLPRRPF
Sbjct: 1   MEGVLIPFSAERSRSLKSRNFFPATVHDGLLNVPPPAVPNYSHR-LRQQPPLLPLPRRPF 60

Query: 63  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPS 122
           P    GA   CRPKG KSRDQSLTPKKSKPIKRS+GP A+KST EF+IVDSTNRLGPEPS
Sbjct: 61  PPTAVGAPPSCRPKGTKSRDQSLTPKKSKPIKRSRGPPALKSTAEFMIVDSTNRLGPEPS 120

Query: 123 HVPKDLWRVLGLRSSA---------EMEFSGSAFSISPPPSSVPLPKFSLRQKVVSCNVE 182
           HVPKDLWRVLGLRSSA         E EFSGSAF +SPPPSSVPLPKF+LR++ +SCNVE
Sbjct: 121 HVPKDLWRVLGLRSSAPPREGGRRFETEFSGSAFGVSPPPSSVPLPKFTLRRE-MSCNVE 180

Query: 183 AAGVDAGATDNLRRLLRLR 193
           AAGVDAGATDNLRRLLRLR
Sbjct: 181 AAGVDAGATDNLRRLLRLR 197

BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A5A7VG22 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001470 PE=4 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71
Identity = 150/203 (73.89%), Postives = 158/203 (77.83%), Query Frame = 0

Query: 3   MEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPF 62
           ME V IPFSADQSRSF PQ  SPATVH GLLN P   +PY   RH +QQPPLLPLPRRP 
Sbjct: 1   MEVVLIPFSADQSRSFNPQNLSPATVHAGLLNFPLRGIPYNGRRH-HQQPPLLPLPRRPL 60

Query: 63  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPS 122
           P  E GAT+F R K +K RDQSL PKKSKPIKRS+GP A KSTVE VI+DSTNRLGPEP 
Sbjct: 61  PPSETGATSFFRQKCVKFRDQSLNPKKSKPIKRSRGPPAAKSTVELVIIDSTNRLGPEPC 120

Query: 123 HVPKDLWRVLGLRSS-------------AEMEFSGSAFSISPPPSSVPLPKFSLRQKVVS 182
           HVPKDLWRVLGLR S             AE+EFSGSA S SPPPSSVPLPKFSLR+KVV 
Sbjct: 121 HVPKDLWRVLGLRPSAPMCKSTRSWETAAEIEFSGSACSQSPPPSSVPLPKFSLRRKVVG 180

Query: 183 CNVEAAGVDAGATDNLRRLLRLR 193
           CNVE AGVDAGATDNLRRLLRLR
Sbjct: 181 CNVEGAGVDAGATDNLRRLLRLR 202

BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A0A0LN70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1)

HSP 1 Score: 270.0 bits (689), Expect = 7.6e-69
Identity = 147/203 (72.41%), Postives = 157/203 (77.34%), Query Frame = 0

Query: 3   MEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPF 62
           ME V IPFSADQSR F PQ  SPA VHGG LN P P + Y S R  +QQPPLLPLPRRP 
Sbjct: 1   MEVVFIPFSADQSRGFNPQNFSPANVHGGFLNFPLPGISYNSCR-QHQQPPLLPLPRRPL 60

Query: 63  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPS 122
           P  E GAT   RPK M+ RDQSLTPKKSKPIKRS+GP A KSTVE VIVDSTNRLGPEPS
Sbjct: 61  PPSEIGATVSSRPKCMEFRDQSLTPKKSKPIKRSRGPPAAKSTVELVIVDSTNRLGPEPS 120

Query: 123 HVPKDLWRVLGLRSS-------------AEMEFSGSAFSISPPPSSVPLPKFSLRQKVVS 182
           HVPKDL  +LGLR S             AE+EFSGSA+S SPPPSSVPLPKFSLR+KVV 
Sbjct: 121 HVPKDLLTLLGLRPSVPLCESTRSWETAAEIEFSGSAYSQSPPPSSVPLPKFSLRRKVVG 180

Query: 183 CNVEAAGVDAGATDNLRRLLRLR 193
           CNVEA+GVDAGATDNLRRLLR+R
Sbjct: 181 CNVEASGVDAGATDNLRRLLRIR 202

BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A6J1KQN3 (uncharacterized protein LOC111496332 OS=Cucurbita maxima OX=3661 GN=LOC111496332 PE=4 SV=1)

HSP 1 Score: 186.0 bits (471), Expect = 1.4e-43
Identity = 107/173 (61.85%), Postives = 124/173 (71.68%), Query Frame = 0

Query: 38  PAVPYFSH-RHNNQQPPLLPLPRRPFPRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRS 97
           PAV ++SH R + +QPP  PLPRR FP  E  A   C PKG++ RDQSL PKKSK IKR 
Sbjct: 15  PAVTFYSHRRRHRRQPPRFPLPRRSFPPSEAEAQPSCGPKGVRFRDQSLAPKKSKSIKRC 74

Query: 98  KGPTAVKSTVEFVIVDSTNRLGPEPSHVPKDLWRVLGLR----------------SSAEM 157
           +    V+ T E +IVDSTNRLGPEPSHVPKDLW VLGLR                 +AE+
Sbjct: 75  R-ELPVEMTAEALIVDSTNRLGPEPSHVPKDLWVVLGLRLPPPPPRPWEDSRSLGVAAEI 134

Query: 158 EFSGSAFSISPPPSSVPLPKFSLRQKVVSCNVE-AAGVDAGATDNLRRLLRLR 193
           EFSGSAFS+SPPPSSVPLP FSL +K ++CNVE AAG+D GAT+NLRRLLRLR
Sbjct: 135 EFSGSAFSVSPPPSSVPLPNFSLMRK-LNCNVEAAAGIDTGATNNLRRLLRLR 185

BLAST of CcUC08G158490 vs. TAIR 10
Match: AT1G20070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09
Identity = 61/194 (31.44%), Postives = 87/194 (44.85%), Query Frame = 0

Query: 9   PFSADQSRSFKPQTSSPATVHGGLLNLPP------PAVPYFSHRHNNQQPPLLPLPRRPF 68
           PF   + RS +   S      GG L LP        + P +   H+  QPPLLPL     
Sbjct: 19  PFKNPKRRSSRGSLSR----SGGSLALPLNPTSSWGSSPAYPPPHSYSQPPLLPL----- 78

Query: 69  PRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPS 128
           PR  +      R    + R  + +        ++   T +K   EF+      R G  P 
Sbjct: 79  PRVNSSTVPLQRVNSSRPRVNNNSSLNRVAQTKAISETHMKK-AEFIESARLTRTGSVPI 138

Query: 129 HVPKDLWRVLGLRSSAEMEFSG----SAFSISPPPSSVPLPKFSLRQKVVSCNVEAAGVD 188
              +       LR   E  F G    +   +SPPPSS+P+P+FS++ K + CNVEAAG  
Sbjct: 139 QANQ-------LRDFPE-GFDGYPGPAIMLLSPPPSSLPMPRFSIKPK-LRCNVEAAGKS 193

Query: 189 AGATDNLRRLLRLR 193
             AT+N+RR+L+LR
Sbjct: 199 DVATNNIRRVLQLR 193

BLAST of CcUC08G158490 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 48/155 (30.97%), Postives = 71/155 (45.81%), Query Frame = 0

Query: 41  PYFSHRHNNQQPPLLPLPRRPFPRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPT 100
           P  S    +  PP+ P    P P P    +AF  PKG   +  S T   S+     +G  
Sbjct: 45  PPRSQSSRSSSPPVAP----PLPPPRAAVSAFV-PKGTLKKSLSNTVAVSQVRILKRGEE 104

Query: 101 AVKSTVEFVI----VDSTNRLGPEPSHVPKDLWRVLGLRSSAEMEFSGSAFSISPPPSSV 160
             K T + V+    + ST R+GP+P  +P  + R+ G +S +   ++G     SPPPS V
Sbjct: 105 IPKETSDLVVEMSDLGSTRRIGPDPGLIPGQI-RLSGRKSKSAPFYAGPVTMTSPPPSDV 164

Query: 161 PLPKFSLRQKVVSCNVEAAGVDAGATDNLRRLLRL 192
           PLP F  ++               AT++L R+LRL
Sbjct: 165 PLPAFFTKK---------------ATNDLIRILRL 178

BLAST of CcUC08G158490 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05
Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 0

Query: 109 VIVDSTNRLGPEPSHVPKDLWRVLGLRSSAEMEFSGSAFSISPPPSSVPLPKF 162
           +IV +TNR+GPEP  + K +   LGL+S     F+G+  S+SPPPS VP+P F
Sbjct: 97  LIVSATNRIGPEPEILMKQI-GALGLQS-----FAGANCSLSPPPSCVPIPCF 143

BLAST of CcUC08G158490 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.2 bits (108), Expect = 3.4e-05
Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 0

Query: 137 SAEMEFSGSA-FSISPPPSSVPLPKFSLRQKVVSCNVEAAGVDAGATDNLRRLLRLR 193
           SA+  ++GS+ F++SP PSS+PLP FS  +K     V    +D  A+ +LRRLLRL+
Sbjct: 81  SADDIYAGSSIFAVSPAPSSLPLPSFS--KKKAKSQVVVVSIDDSASQDLRRLLRLK 135

BLAST of CcUC08G158490 vs. TAIR 10
Match: AT2G25250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32020.1); Has 30 Blast hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 42.7 bits (99), Expect = 3.8e-04
Identity = 28/90 (31.11%), Postives = 45/90 (50.00%), Query Frame = 0

Query: 102 VKSTVEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAEMEFSGSAFSISPPPSSVPLPKF 161
           VK  +E   + S  ++G +P  +   + R+   +S   + ++G   S SPPPS VPLP F
Sbjct: 70  VKIPIEKPDLKSNRQIGSDPMKISTPI-RISNRKSMPALFYAGPVTSTSPPPSEVPLPAF 129

Query: 162 SLRQKVVSCNVEAAGVDAGATDNLRRLLRL 192
              + V      A      AT++L ++LRL
Sbjct: 130 FANKTV------AGFKPTDATNDLIKILRL 152

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038884839.18.0e-8182.35uncharacterized protein LOC120075485 [Benincasa hispida][more]
XP_023546813.13.8e-7577.89proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo][more]
XP_022997633.11.5e-7476.88uncharacterized protein LOC111492508 [Cucurbita maxima][more]
XP_022962625.13.6e-7376.38uncharacterized protein LOC111463019 [Cucurbita moschata][more]
KAG7029446.12.3e-7275.88hypothetical protein SDJN02_07785, partial [Cucurbita argyrosperma subsp. argyro... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1KEH87.1e-7576.88uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508... [more]
A0A6J1HFM41.7e-7376.38uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC1114630... [more]
A0A5A7VG221.6e-7173.89Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=... [more]
A0A0A0LN707.6e-6972.41Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1[more]
A0A6J1KQN31.4e-4361.85uncharacterized protein LOC111496332 OS=Cucurbita maxima OX=3661 GN=LOC111496332... [more]
Match NameE-valueIdentityDescription
AT1G20070.15.1e-0931.44unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G32020.11.1e-0830.97unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G02040.11.2e-0549.06unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G21570.13.4e-0545.61unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bac... [more]
AT2G25250.13.8e-0431.11unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 10..29
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..99
NoneNo IPR availablePANTHERPTHR33670:SF14SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKEcoord: 23..192
NoneNo IPR availablePANTHERPTHR33670SPLICING FACTOR, PROLINE- AND GLUTAMINE-RICH-LIKEcoord: 23..192

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G158490.1CcUC08G158490.1mRNA