CcUC08G158490 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTTGCTGAAAATCCCATCATCCATTCTTTGGATCAATCAAATATATACATTTTTCTAACTTTTCTCGATTCTGGATTGTATTTATTTCTGGTTTGCAAAAAAACCCACTTTTTTTTTTTCCGTTCAAATCCATACGAAATTCTTCACAATTTAATCTTTTCGTTTCAATTGGGACTCTGTTTTTGTTTTTCCCTGTTAACTGTATGATCTTTGTTTTTGATTTTGATTGAGTTTGAATTTTCCAGGTTCAGATCTTTGTAAAGTGCAGCAATGGAAGCAGTTTCGATTCCATTTTCTGCTGATCAATCTCGTAGTTTTAAACCTCAAACTTCCTCTCCGGCCACCGTCCACGGCGGTCTTCTCAACCTCCCTCCGCCGGCCGTCCCTTATTTCAGTCACCGCCATAATAACCAGCAACCGCCTCTCCTCCCTTTGCCCCGCCGTCCATTTCCCCGTCCAGAAAACGGAGCCACGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCAATCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCAACGGCGGTGAAATCGACGGTGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAGAGTTTTAGGACTACGGTCGTCGGCGGAGATGGAGTTTTCGGGGTCGGCATTCAGCATTTCGCCGCCGCCGAGTAGTGTTCCACTTCCGAAATTCTCTCTGAGGCAGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA ATGGCAATGGAAGCAGTTTCGATTCCATTTTCTGCTGATCAATCTCGTAGTTTTAAACCTCAAACTTCCTCTCCGGCCACCGTCCACGGCGGTCTTCTCAACCTCCCTCCGCCGGCCGTCCCTTATTTCAGTCACCGCCATAATAACCAGCAACCGCCTCTCCTCCCTTTGCCCCGCCGTCCATTTCCCCGTCCAGAAAACGGAGCCACGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCAATCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCAACGGCGGTGAAATCGACGGTGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAGAGTTTTAGGACTACGGTCGTCGGCGGAGATGGAGTTTTCGGGGTCGGCATTCAGCATTTCGCCGCCGCCGAGTAGTGTTCCACTTCCGAAATTCTCTCTGAGGCAGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA ATGGCAATGGAAGCAGTTTCGATTCCATTTTCTGCTGATCAATCTCGTAGTTTTAAACCTCAAACTTCCTCTCCGGCCACCGTCCACGGCGGTCTTCTCAACCTCCCTCCGCCGGCCGTCCCTTATTTCAGTCACCGCCATAATAACCAGCAACCGCCTCTCCTCCCTTTGCCCCGCCGTCCATTTCCCCGTCCAGAAAACGGAGCCACGGCATTCTGCCGCCCAAAGGGTATGAAATCCAGAGACCAATCTCTTACTCCAAAGAAATCAAAGCCAATTAAACGAAGTAAAGGGCCAACGGCGGTGAAATCGACGGTGGAGTTCGTGATCGTTGATTCCACGAATCGACTGGGGCCGGAGCCGAGCCATGTTCCTAAAGATTTATGGAGAGTTTTAGGACTACGGTCGTCGGCGGAGATGGAGTTTTCGGGGTCGGCATTCAGCATTTCGCCGCCGCCGAGTAGTGTTCCACTTCCGAAATTCTCTCTGAGGCAGAAGGTGGTTAGTTGTAACGTGGAGGCCGCCGGAGTAGACGCCGGAGCCACCGACAATCTCAGGCGACTTTTGCGCCTCCGATGA MAMEAVSIPFSADQSRSFKPQTSSPATVHGGLLNLPPPAVPYFSHRHNNQQPPLLPLPRRPFPRPENGATAFCRPKGMKSRDQSLTPKKSKPIKRSKGPTAVKSTVEFVIVDSTNRLGPEPSHVPKDLWRVLGLRSSAEMEFSGSAFSISPPPSSVPLPKFSLRQKVVSCNVEAAGVDAGATDNLRRLLRLR Homology
BLAST of CcUC08G158490 vs. NCBI nr
Match: XP_038884839.1 (uncharacterized protein LOC120075485 [Benincasa hispida]) HSP 1 Score: 310.8 bits (795), Expect = 8.0e-81 Identity = 168/204 (82.35%), Postives = 175/204 (85.78%), Query Frame = 0
BLAST of CcUC08G158490 vs. NCBI nr
Match: XP_023546813.1 (proline-rich receptor-like protein kinase PERK2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 292.0 bits (746), Expect = 3.8e-75 Identity = 155/199 (77.89%), Postives = 167/199 (83.92%), Query Frame = 0
BLAST of CcUC08G158490 vs. NCBI nr
Match: XP_022997633.1 (uncharacterized protein LOC111492508 [Cucurbita maxima]) HSP 1 Score: 290.0 bits (741), Expect = 1.5e-74 Identity = 153/199 (76.88%), Postives = 167/199 (83.92%), Query Frame = 0
BLAST of CcUC08G158490 vs. NCBI nr
Match: XP_022962625.1 (uncharacterized protein LOC111463019 [Cucurbita moschata]) HSP 1 Score: 285.4 bits (729), Expect = 3.6e-73 Identity = 152/199 (76.38%), Postives = 165/199 (82.91%), Query Frame = 0
BLAST of CcUC08G158490 vs. NCBI nr
Match: KAG7029446.1 (hypothetical protein SDJN02_07785, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 282.7 bits (722), Expect = 2.3e-72 Identity = 151/199 (75.88%), Postives = 163/199 (81.91%), Query Frame = 0
BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A6J1KEH8 (uncharacterized protein LOC111492508 OS=Cucurbita maxima OX=3661 GN=LOC111492508 PE=4 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 7.1e-75 Identity = 153/199 (76.88%), Postives = 167/199 (83.92%), Query Frame = 0
BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A6J1HFM4 (uncharacterized protein LOC111463019 OS=Cucurbita moschata OX=3662 GN=LOC111463019 PE=4 SV=1) HSP 1 Score: 285.4 bits (729), Expect = 1.7e-73 Identity = 152/199 (76.38%), Postives = 165/199 (82.91%), Query Frame = 0
BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A5A7VG22 (Sec-independent protein translocase protein TATC OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001470 PE=4 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71 Identity = 150/203 (73.89%), Postives = 158/203 (77.83%), Query Frame = 0
BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A0A0LN70 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G345930 PE=4 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 7.6e-69 Identity = 147/203 (72.41%), Postives = 157/203 (77.34%), Query Frame = 0
BLAST of CcUC08G158490 vs. ExPASy TrEMBL
Match: A0A6J1KQN3 (uncharacterized protein LOC111496332 OS=Cucurbita maxima OX=3661 GN=LOC111496332 PE=4 SV=1) HSP 1 Score: 186.0 bits (471), Expect = 1.4e-43 Identity = 107/173 (61.85%), Postives = 124/173 (71.68%), Query Frame = 0
BLAST of CcUC08G158490 vs. TAIR 10
Match: AT1G20070.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; Has 26 Blast hits to 26 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 58.9 bits (141), Expect = 5.1e-09 Identity = 61/194 (31.44%), Postives = 87/194 (44.85%), Query Frame = 0
BLAST of CcUC08G158490 vs. TAIR 10
Match: AT4G32020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G25250.1); Has 65 Blast hits to 65 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 3; Fungi - 8; Plants - 54; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08 Identity = 48/155 (30.97%), Postives = 71/155 (45.81%), Query Frame = 0
BLAST of CcUC08G158490 vs. TAIR 10
Match: AT4G02040.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; Has 30 Blast hits to 30 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 1.2e-05 Identity = 26/53 (49.06%), Postives = 36/53 (67.92%), Query Frame = 0
BLAST of CcUC08G158490 vs. TAIR 10
Match: AT3G21570.1 (unknown protein; Has 43 Blast hits to 43 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 46.2 bits (108), Expect = 3.4e-05 Identity = 26/57 (45.61%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of CcUC08G158490 vs. TAIR 10
Match: AT2G25250.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32020.1); Has 30 Blast hits to 30 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 42.7 bits (99), Expect = 3.8e-04 Identity = 28/90 (31.11%), Postives = 45/90 (50.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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