CcUC08G158070 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGCTTACACCTCAGCAACTATTGGCCTACAATGGCACCGACCGATCAAAGCCAATCTATGTGGCTTTGAAGGGCCGCATTTACGACGTAACAACAGGGGCTTTTTTATACGGCCCCGGTGGTCCATACGCCATTTTCGCCGGCAAGGACGCGAGCAGAGCTCTGGCCAAGATGACCAAGAACGAGGCGGACATCACCTCTTCCCTTACCGGCCTCTCCGAGAAAGAAATCGCTGCTCTCAACAACTGGGAGAAGAAATTTCAAGCTAAGTACCCTATTGTTGGCCGTGTTGTTTAA ATGGAGCTTACACCTCAGCAACTATTGGCCTACAATGGCACCGACCGATCAAAGCCAATCTATGTGGCTTTGAAGGGCCGCATTTACGACGTAACAACAGGGGCTTTTTTATACGGCCCCGGTGGTCCATACGCCATTTTCGCCGGCAAGGACGCGAGCAGAGCTCTGGCCAAGATGACCAAGAACGAGGCGGACATCACCTCTTCCCTTACCGGCCTCTCCGAGAAAGAAATCGCTGCTCTCAACAACTGGGAGAAGAAATTTCAAGCTAAGTACCCTATTGTTGGCCGTGTTGTTTAA ATGGAGCTTACACCTCAGCAACTATTGGCCTACAATGGCACCGACCGATCAAAGCCAATCTATGTGGCTTTGAAGGGCCGCATTTACGACGTAACAACAGGGGCTTTTTTATACGGCCCCGGTGGTCCATACGCCATTTTCGCCGGCAAGGACGCGAGCAGAGCTCTGGCCAAGATGACCAAGAACGAGGCGGACATCACCTCTTCCCTTACCGGCCTCTCCGAGAAAGAAATCGCTGCTCTCAACAACTGGGAGAAGAAATTTCAAGCTAAGTACCCTATTGTTGGCCGTGTTGTTTAA MELTPQQLLAYNGTDRSKPIYVALKGRIYDVTTGAFLYGPGGPYAIFAGKDASRALAKMTKNEADITSSLTGLSEKEIAALNNWEKKFQAKYPIVGRVV Homology
BLAST of CcUC08G158070 vs. NCBI nr
Match: XP_008445274.1 (PREDICTED: probable steroid-binding protein 3 [Cucumis melo] >KAA0064879.1 putative steroid-binding protein 3 [Cucumis melo var. makuwa]) HSP 1 Score: 174.1 bits (440), Expect = 6.0e-40 Identity = 84/99 (84.85%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of CcUC08G158070 vs. NCBI nr
Match: XP_038886284.1 (probable steroid-binding protein 3 [Benincasa hispida]) HSP 1 Score: 173.7 bits (439), Expect = 7.9e-40 Identity = 84/99 (84.85%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of CcUC08G158070 vs. NCBI nr
Match: XP_022962142.1 (probable steroid-binding protein 3 [Cucurbita moschata] >KAG6598539.1 putative steroid-binding protein 3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029471.1 putative steroid-binding protein 3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 173.3 bits (438), Expect = 1.0e-39 Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0
BLAST of CcUC08G158070 vs. NCBI nr
Match: XP_022997574.1 (probable steroid-binding protein 3 [Cucurbita maxima]) HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39 Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0
BLAST of CcUC08G158070 vs. NCBI nr
Match: XP_038885033.1 (probable steroid-binding protein 3 [Benincasa hispida]) HSP 1 Score: 171.4 bits (433), Expect = 3.9e-39 Identity = 84/99 (84.85%), Postives = 88/99 (88.89%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy Swiss-Prot
Match: Q9SK39 (Probable steroid-binding protein 3 OS=Arabidopsis thaliana OX=3702 GN=MP3 PE=1 SV=1) HSP 1 Score: 149.1 bits (375), Expect = 2.7e-35 Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy Swiss-Prot
Match: Q9FVZ9 (Membrane steroid-binding protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP2 PE=2 SV=1) HSP 1 Score: 117.5 bits (293), Expect = 8.8e-26 Identity = 53/97 (54.64%), Postives = 73/97 (75.26%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy Swiss-Prot
Match: Q9M2Z4 (Membrane steroid-binding protein 2 OS=Arabidopsis thaliana OX=3702 GN=MSBP2 PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 5.7e-25 Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy Swiss-Prot
Match: Q9XFM6 (Membrane steroid-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=MSBP1 PE=1 SV=2) HSP 1 Score: 112.8 bits (281), Expect = 2.2e-24 Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy Swiss-Prot
Match: Q9FVZ7 (Membrane steroid-binding protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MSBP1 PE=1 SV=1) HSP 1 Score: 112.5 bits (280), Expect = 2.8e-24 Identity = 52/97 (53.61%), Postives = 69/97 (71.13%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy TrEMBL
Match: A0A5A7VHD3 (Putative steroid-binding protein 3 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G001920 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40 Identity = 84/99 (84.85%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy TrEMBL
Match: A0A1S3BD16 (probable steroid-binding protein 3 OS=Cucumis melo OX=3656 GN=LOC103488356 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40 Identity = 84/99 (84.85%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy TrEMBL
Match: A0A6J1HBX6 (probable steroid-binding protein 3 OS=Cucurbita moschata OX=3662 GN=LOC111462683 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 5.0e-40 Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy TrEMBL
Match: A0A6J1KBX0 (probable steroid-binding protein 3 OS=Cucurbita maxima OX=3661 GN=LOC111492464 PE=4 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 6.5e-40 Identity = 84/99 (84.85%), Postives = 89/99 (89.90%), Query Frame = 0
BLAST of CcUC08G158070 vs. ExPASy TrEMBL
Match: A0A6J1BPT6 (probable steroid-binding protein 3 OS=Momordica charantia OX=3673 GN=LOC111004708 PE=4 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 5.5e-39 Identity = 81/99 (81.82%), Postives = 90/99 (90.91%), Query Frame = 0
BLAST of CcUC08G158070 vs. TAIR 10
Match: AT2G24940.1 (membrane-associated progesterone binding protein 2 ) HSP 1 Score: 149.1 bits (375), Expect = 1.9e-36 Identity = 69/99 (69.70%), Postives = 82/99 (82.83%), Query Frame = 0
BLAST of CcUC08G158070 vs. TAIR 10
Match: AT3G48890.1 (membrane-associated progesterone binding protein 3 ) HSP 1 Score: 114.8 bits (286), Expect = 4.0e-26 Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 0
BLAST of CcUC08G158070 vs. TAIR 10
Match: AT5G52240.1 (membrane steroid binding protein 1 ) HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25 Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of CcUC08G158070 vs. TAIR 10
Match: AT5G52240.2 (membrane steroid binding protein 1 ) HSP 1 Score: 112.8 bits (281), Expect = 1.5e-25 Identity = 53/97 (54.64%), Postives = 70/97 (72.16%), Query Frame = 0
BLAST of CcUC08G158070 vs. TAIR 10
Match: AT4G14965.1 (membrane-associated progesterone binding protein 4 ) HSP 1 Score: 80.9 bits (198), Expect = 6.5e-16 Identity = 39/94 (41.49%), Postives = 55/94 (58.51%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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