CcUC08G155700 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G155700
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRibosomal RNA small subunit methyltransferase A
LocationCicolChr08: 24138983 .. 24143213 (-)
RNA-Seq ExpressionCcUC08G155700
SyntenyCcUC08G155700
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
AGTCATGCACCCTATGGCCCACCAAGCCAGCACCACAGATCCGACCTGGCATTAACTTTCTCCGATTTCTTTTCCTCTAGTCCCATACCTACAGTACCGAATATGTAGTCTCCTCCATGACGTAGATTCTTCCAAAATATTTTATTCGTTTAATCTCAACCGTCCACGTGTTGCTCATACATTGACTTTGGAAGCTATTGCTTGCACAGGATAACGTCCTTTGTTGCAGCCTTTCTCACCACGTAAACGTAATTAATATTTTAATATAAGAAATTTGATTGGTGTCAAATGATTAGTGGAGGAAGCCAAGCCATCGAGGGATCCGACTGCAGCAAAAATGAAAAAGCCTTCATCTTAAGCTTCTCCAATTTTGCAACTCCCGGCTCTTTTTTGACGATCGATTGGCTGAATTTTTTTGAATTCGACTGCCTTTGAATCCTCCATTTTCAGAAGAACAGTCTTTGCTTCGAGATTTGTTCGTTAAGGTAGATTTCTGTGTTTCTTAAGCTTTAGTTTTTGTTTTATCATGTTTGATTTGATTGTGCGTTTGGTTTAAGATTCCTGGATTTCTTTTTGTTACTTTCGGTTGCAATGTTTGAAAAGCAAGTTTTCGGAAAGTCAATTACTAGTGGGAGGAGGAGGAGGTTGCTTCAGGAAGAAATCGAATTAAGTTTATTTCTGTGTTTGGAATTTAAGAGTTCTGATGATCTAGAGGTATTTGTCGGTTTGTTTAAATTTTCAGTGCTTGAATGAGTCTGAAATCTGACAAGAGAACGTGACTGTTTCCTTTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTTATAAAAATTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTTATAAAAATTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTTATAAAAATTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTTATAAAAATTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTTATAAAAATTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTTATAAAAATTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTATGTTATAAAAATTTTTTTTTTTTTGTTTTTTTTTTTTTTTTTCTTTTGTCTTCATTTTTTAAAGTAGAAACAATATTAAATTGTAGGTTCTATGAATTTGCCGACTTCTTGAGTAGAAGCAATCTCTTCAAATGAAAGAGGGGAAAAAGGATTGTTGGTAGCTTTAATCGTGAACTTTGAGGGAGATAAATTTAGAAAAGCCGTGTTTCCTTTTTCGGACACAGCTCGATTTTGTCAAGGTAGTTTCTCTGTAGTGGTTATTGTTTTGATTTTTCTATTTCCAATTCTGCGAAAGCTTCTGCATAGATTGGCCACGGGAACTGGATTTAGGAAATTTTATCATTAAAATCTTATCCAAAAAATTATCTATCTATCTATATATATTATATCTATATATATTATATATCTATAAATATAATATATATACATATATCTATCTATACATATATATATCATTAGCTGTTTTTCACGTTCTTCCGTCTTGATTACTACAATCTGGAAACTTGGCCAAAAGCCCTGAAGAATCTTGAGGTGATTTCCGGATTGTCAAGGCTTGAAGTAAGGTCAAACAGAGTTATCTCTCTTTGTTTTCTTCCTTCCCGAGTTTGTGGGATCCTTTGGATTCATCCAAAACTCTAGCGTTTAGTCTATTATGCTACATTAGATGTGATGGAATTTGCTCGTTTGTTTCTTCATTTTGTTAACTTGGACAATTTATGATTGCAGCCATTTCGTTTGTTGTCATTTCAAAATTTGATTGATCAATTTCTTCCTGCTATTTTATCCTTAACAGGGGAAAACTGCTCCATTTCACCTATCAGACCTTTGAATCTACTTGTAATTAGCTTATATTTCTTTGGAGACTTTGTATTCATTAGTAAAGAAAATTGAACTCACACATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGCTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAACCGGGAAACAGATACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATTTCATCCTCGTCTAGAAGGGTGAAGCGGAAATGGCATAGTCGAGAAGAGAGAAAAATTGATAGGGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGACTCAGATTGGTCAATTGGATGGTCGGAGCCCCATGGACCTGGATTCCAAAGCGATGATGACTCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGTCGCATTTACAATGATTTTGTGGATGACACTAAGAATAGTATCTTAAGCGCCGTTGGGAACATCAACGATAGCTTTTCTGCTGGTAAGAGTTGTTTCTTCTCAAGCTTTCCTTTTGATTGGTGTTGCGTGTAAGTTATTGCTTTTACCTCCCAAAATATTCTTCTAGTCTTCTTTCTTCTTTCGTAAATAGCGAACTCAATAACTTCGTCCATAACCTGAGTCCTAAGATAACTTAATTTCATCATTGCCCACAGTCGACTTAGATTGTAAATGTTGGACATCAGGTAACCATATTCCAAAGAATAAAACCCTTTTATGTAATTTAGTTGTCTCTCATTCATAGATCCTTATTTTTAGTAAGATGATGCTATTCCCTTTTCTGAATCATGCTCATCGGGAGACATTGTGAAACTTCATCTCTAAGACATATTACTTGATACATTCTCAATAGGACAATTATGCATTAAAAAGATATCAGCAAATCAAAGAACAACCGAATGATCTTTCTCAAGAAAAGGGTGTCACCAGATCCTTGTTTGCACTTCTTGTGGCAAGCTAGTACAAAATTATGTACATTTATGTGGTGAAATGATGAGCAAGGATCTCTTTAATGCTAGCTACTATTTCGTGTAAGTAAGGAAACTCCAGACATGGAGGAGCCATTAGGTGAAAGTGAATCTTGACCATTCAGACCAATCCAGTAGTTCAATCTATTCTTTATCTGTACAACTGAGTAAGCAAATAGGCTTATATTCTCTGATATGGTGACCAAAGTGTAGAATGATAGAATCAGAATCAACTTCTTTCGGTGTGGAAACTTCCCATATGCCTTGTCCATACATAGGCTCTAAAACTTAGTGGGACATGTGAGTAGAAAAAAGTACCATGAATATGTAGAATTAATAGAATTCTGTTTGCTTTGGGCCTTTACGGCAATATTTAGAGTTTCCTTGCTCTGATTGATTTCGTACTGGCTTCAAATTGTGTGATTGTTCTTCTAGCTAATGTGAATAAATACTAAAATTAGTAACTACACATGTAATTTCCTTTTGGTTGCTTTATATTTGTTTTAAGCTGATTATTTCTGCACTTTTCCATGAACCAGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAATGTTCTGTTTCCAAGAAGAAAAGAAAACATTTTGTGATCTTTAGCCATTTAGAAAACTGGAAAAAAATTGAAAAAAGAAAAAAGAAAAACATTATAAGAATACTATCTATTCTGGCTTCGTTCGATATTACTGCTGAGAAGCAAATTGGATGTTAGCAGTGAGTGGAGGTTCTCATCTGTTCCATTCTTTTTGACCATGCTCTTAAGAAGAGAGAGACTTAAAAAAATATGACCTCGTCTGGGATGAAGCTTTGTTAAAATGGGAATGTAAATACTTTGAGACTCCTTTATAAATATGGAAGGGAGACAGGAGGAAAAAGTTTGAGCGAACCAGTTGGGGTTTGAAGAAAAAGAATATTAAAGAAGTGGTGGAAGTGGAAGTACTTTGTTATTCTTTGACGTTAAGTTAATGTATAAAGGGGAAGTGTTTAATTGATGTGAAAGTTGCTGTAAATGGTTACTCATTTATGTATGCATAATGTAAAATATCATGAGTGAGTTTGGTCCATCTAAATGTTGCTGTAATTGGTGGGACCCATTTGTAAAATTTATTGTACATAGTAACACAGTTGTGCAGGCATGTAAATTGTAAATATTTCCATCCCCATTCAATGTAATATTCTTTAGACATATTGTATATAGCATGTAATTTCGTTTT

mRNA sequence

AGTCATGCACCCTATGGCCCACCAAGCCAGCACCACAGATCCGACCTGGCATTAACTTTCTCCGATTTCTTTTCCTCTAGTCCCATACCTACACTGTTTTTCACGTTCTTCCGTCTTGATTACTACAATCTGGAAACTTGGCCAAAAGCCCTGAAGAATCTTGAGGTGATTTCCGGATTGTCAAGGCTTGAAGTAAGAAAATTGAACTCACACATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGCTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAACCGGGAAACAGATACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATTTCATCCTCGTCTAGAAGGGTGAAGCGGAAATGGCATAGTCGAGAAGAGAGAAAAATTGATAGGGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGACTCAGATTGGTCAATTGGATGGTCGGAGCCCCATGGACCTGGATTCCAAAGCGATGATGACTCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGTCGCATTTACAATGATTTTGTGGATGACACTAAGAATAGTATCTTAAGCGCCGTTGGGAACATCAACGATAGCTTTTCTGCTGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAATGTTCTGTTTCCAAGAAGAAAAGAAAACATTTTGTGATCTTTAGCCATTTAGAAAACTGGAAAAAAATTGAAAAAAGAAAAAAGAAAAACATTATAAGAATACTATCTATTCTGGCTTCGTTCGATATTACTGCTGAGAAGCAAATTGGATGTTAGCAGTGAGTGGAGGTTCTCATCTGTTCCATTCTTTTTGACCATGCTCTTAAGAAGAGAGAGACTTAAAAAAATATGACCTCGTCTGGGATGAAGCTTTGTTAAAATGGGAATGTAAATACTTTGAGACTCCTTTATAAATATGGAAGGGAGACAGGAGGAAAAAGTTTGAGCGAACCAGTTGGGGTTTGAAGAAAAAGAATATTAAAGAAGTGGTGGAAGTGGAAGTACTTTGTTATTCTTTGACGTTAAGTTAATGTATAAAGGGGAAGTGTTTAATTGATGTGAAAGTTGCTGTAAATGGTTACTCATTTATGTATGCATAATGTAAAATATCATGAGTGAGTTTGGTCCATCTAAATGTTGCTGTAATTGGTGGGACCCATTTGTAAAATTTATTGTACATAGTAACACAGTTGTGCAGGCATGTAAATTGTAAATATTTCCATCCCCATTCAATGTAATATTCTTTAGACATATTGTATATAGCATGTAATTTCGTTTT

Coding sequence (CDS)

AGTCATGCACCCTATGGCCCACCAAGCCAGCACCACAGATCCGACCTGGCATTAACTTTCTCCGATTTCTTTTCCTCTAGTCCCATACCTACACTGTTTTTCACGTTCTTCCGTCTTGATTACTACAATCTGGAAACTTGGCCAAAAGCCCTGAAGAATCTTGAGGTGATTTCCGGATTGTCAAGGCTTGAAGTAAGAAAATTGAACTCACACATGTCTGTGGCATTTCCCCAACTCTCGTGGTGGCTATGGAGTGGGAAGCATAAAGAACCTCGAAGCTCTAATGGTGGGTCTGCTTTAAATGCTTCACTAGATACAGCCAACCGGGAAACAGATACTCTAAAATTTCCTTTAGTTAATGGGGCCAACATTTCATCCTCGTCTAGAAGGGTGAAGCGGAAATGGCATAGTCGAGAAGAGAGAAAAATTGATAGGGAATATGACATTGTTCTTGTTCCATCTGATGGAGGATGTGTTTCAGGGTCTGAGTCTGATGACTCAGATTGGTCAATTGGATGGTCGGAGCCCCATGGACCTGGATTCCAAAGCGATGATGACTCAGATAACAGTTTTGCTGTGCTGGTTCCATGTTATGGTCGCATTTACAATGATTTTGTGGATGACACTAAGAATAGTATCTTAAGCGCCGTTGGGAACATCAACGATAGCTTTTCTGCTGAGAGCAAGAAATATATGGAACAGTGGCTGTCCTCTCTTCAGAACTGCTAA

Protein sequence

SHAPYGPPSQHHRSDLALTFSDFFSSSPIPTLFFTFFRLDYYNLETWPKALKNLEVISGLSRLEVRKLNSHMSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSFAVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
Homology
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BLAST of CcUC08G155700 vs. NCBI nr
Match: XP_038886443.1 (uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886445.1 uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886446.1 uncharacterized protein LOC120076637 [Benincasa hispida])

HSP 1 Score: 350.1 bits (897), Expect = 1.5e-92
Identity = 169/171 (98.83%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 243
           AVLVPCYGRIYNDFVD+TKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171

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BLAST of CcUC08G155700 vs. NCBI nr
Match: XP_004152600.1 (uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736757.1 uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736758.1 uncharacterized protein LOC101213956 [Cucumis sativus] >KGN62990.2 hypothetical protein Csa_022594 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.6e-92
Identity = 168/171 (98.25%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGAN+SSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANLSSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 243
           AVLVPCYGRIYNDFVD+TKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]
BLAST of CcUC08G155700 vs. NCBI nr
Match: XP_008444920.1 (PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_016900065.1 PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo])

HSP 1 Score: 349.4 bits (895), Expect = 2.6e-92
Identity = 167/171 (97.66%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 243
           AVLVPCYGRIYNDFVD+TKNSILSA+GNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]
BLAST of CcUC08G155700 vs. NCBI nr
Match: XP_022997281.1 (uncharacterized protein LOC111492231 isoform X2 [Cucurbita maxima])

HSP 1 Score: 330.9 bits (847), Expect = 9.4e-87
Identity = 161/171 (94.15%), Postives = 166/171 (97.08%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 243
           AVLVPCY RIYNDFVD+TK S+LSAVGNI+DSFS ESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQNC 171

[Close]
BLAST of CcUC08G155700 vs. NCBI nr
Match: XP_023545352.1 (uncharacterized protein LOC111804795 isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.5 bits (846), Expect = 1.2e-86
Identity = 160/171 (93.57%), Postives = 166/171 (97.08%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWL SGKHKEP+SSNGGS+LNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSSLNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCISGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 243
           AVLVPCY RIYNDFVD+TK S+LSAVGNI+DSFS ESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQNC 171

[Close]
BLAST of CcUC08G155700 vs. ExPASy TrEMBL
Match: A0A1S3BB05 (uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=4 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.2e-92
Identity = 167/171 (97.66%), Postives = 171/171 (100.00%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERK+DREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDD+SDNSF
Sbjct: 61  KRKWHSREERKVDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDESDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 243
           AVLVPCYGRIYNDFVD+TKNSILSA+GNINDSFSAESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYGRIYNDFVDETKNSILSAIGNINDSFSAESKKYMEQWLSSLQNC 171

[Close]
BLAST of CcUC08G155700 vs. ExPASy TrEMBL
Match: A0A6J1K730 (uncharacterized protein LOC111492231 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111492231 PE=4 SV=1)

HSP 1 Score: 330.9 bits (847), Expect = 4.5e-87
Identity = 161/171 (94.15%), Postives = 166/171 (97.08%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 243
           AVLVPCY RIYNDFVD+TK S+LSAVGNI+DSFS ESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSSLQNC 171

[Close]
BLAST of CcUC08G155700 vs. ExPASy TrEMBL
Match: A0A6J1HCV7 (uncharacterized protein LOC111462457 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111462457 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 1.0e-86
Identity = 160/171 (93.57%), Postives = 166/171 (97.08%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSLQNC 243
           AVLVPCY RIYNDFVD+TK S+LSAVGNI+DSFS ESKKYMEQWLS+LQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTESKKYMEQWLSALQNC 171

[Close]
BLAST of CcUC08G155700 vs. ExPASy TrEMBL
Match: A0A6J1KDE3 (uncharacterized protein LOC111492231 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492231 PE=4 SV=1)

HSP 1 Score: 327.8 bits (839), Expect = 3.9e-86
Identity = 162/172 (94.19%), Postives = 167/172 (97.09%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFS-AESKKYMEQWLSSLQNC 243
           AVLVPCY RIYNDFVD+TK S+LSAVGNI+DSFS AESKKYMEQWLSSLQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTAESKKYMEQWLSSLQNC 172

[Close]
BLAST of CcUC08G155700 vs. ExPASy TrEMBL
Match: A0A6J1HCV2 (uncharacterized protein LOC111462457 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462457 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 8.6e-86
Identity = 161/172 (93.60%), Postives = 167/172 (97.09%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSGKHKEPRSSNGGSALNASLDTANRETDTLKFPLVNGANISSSSRRV 131
           MSVAFPQLSWWL SGKHKEP+SSNGGSALNASLDTANRETDTLKF LVNGANISSSSRRV
Sbjct: 1   MSVAFPQLSWWLRSGKHKEPQSSNGGSALNASLDTANRETDTLKFSLVNGANISSSSRRV 60

Query: 132 KRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 191
           KRKWHSREERKIDREYDIVLVPSDGGC+SGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF
Sbjct: 61  KRKWHSREERKIDREYDIVLVPSDGGCMSGSESDDSDWSIGWSEPHGPGFQSDDDSDNSF 120

Query: 192 AVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFS-AESKKYMEQWLSSLQNC 243
           AVLVPCY RIYNDFVD+TK S+LSAVGNI+DSFS AESKKYMEQWLS+LQNC
Sbjct: 121 AVLVPCYARIYNDFVDETKISVLSAVGNISDSFSTAESKKYMEQWLSALQNC 172

[Close]
BLAST of CcUC08G155700 vs. TAIR 10
Match: AT5G65480.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G38060.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 4.9e-17
Identity = 64/173 (36.99%), Postives = 87/173 (50.29%), Query Frame = 0 

Query: 72  MSVAFPQLSWWLWSG---KHKEPRSS--NGGSALNASLDTANRETDTLKFPLVNGANISS 131
           M+V+FP+L  WL  G   K +E + S   G S+L+ SL    ++T T K       + SS
Sbjct: 1   MAVSFPRLPRWLCGGSNTKDREKKESIPKGSSSLSPSL----KKTTTSK-----TGSSSS 60

Query: 132 SSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSDWSIGWSEPHGPGFQSDDD 191
           S ++ KR W  R       E D +      G V   E DD +WSIGW EPHGPGF+++DD
Sbjct: 61  SVKKTKRGWIGRGGSGSGGEEDKI------GNVVFPEPDDPEWSIGWVEPHGPGFKAEDD 120

Query: 192 SDNSFAVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAESKKYMEQWLSSL 240
               F VLVP Y ++ +   +   N   S         +A   K MEQWLSS+
Sbjct: 121 DCGGFVVLVPLYKKVMDGSGNQIPNGFFSP--------AAPDGKNMEQWLSSM 150

[Close]
BLAST of CcUC08G155700 vs. TAIR 10
Match: AT4G38060.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 85.5 bits (210), Expect = 6.4e-17
Identity = 54/133 (40.60%), Postives = 71/133 (53.38%), Query Frame = 0 

Query: 109 RETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSD 168
           +ET+ LKFP       +  +R  KRK    E         + +V  DG           +
Sbjct: 20  KETEALKFP-------TKIARVNKRKELELESFGSSGSESVDVVAGDG----------PE 79

Query: 169 WSIGWSEPHGPGFQSDDD-SDNSFAVLVPCYGRIYNDFVDDTKNSILSAVGNINDSFSAE 228
           WS+GW+EPHGP FQSDD+ +D  F VLVPCY R   +   +  N +LSAV N+ +    +
Sbjct: 80  WSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQLLSAVKNLPNGLPPD 134

Query: 229 SKKYMEQWLSSLQ 241
            K YMEQWLSSLQ
Sbjct: 140 GKNYMEQWLSSLQ 134

[Close]
BLAST of CcUC08G155700 vs. TAIR 10
Match: AT4G38060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G65480.1); Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 1.5e-10
Identity = 43/113 (38.05%), Postives = 58/113 (51.33%), Query Frame = 0 

Query: 109 RETDTLKFPLVNGANISSSSRRVKRKWHSREERKIDREYDIVLVPSDGGCVSGSESDDSD 168
           +ET+ LKFP       +  +R  KRK    E         + +V  DG           +
Sbjct: 20  KETEALKFP-------TKIARVNKRKELELESFGSSGSESVDVVAGDG----------PE 79

Query: 169 WSIGWSEPHGPGFQSDDD-SDNSFAVLVPCYGRIYNDFVDDTKNSILSAVGNI 221
           WS+GW+EPHGP FQSDD+ +D  F VLVPCY R   +   +  N +LSAV N+
Sbjct: 80  WSVGWTEPHGPDFQSDDEGNDGGFLVLVPCY-RAVVEGSSNNNNQLLSAVKNL 114

The following BLAST results are available for this feature:
BLAST of CcUC08G155700 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886443.11.5e-9298.83uncharacterized protein LOC120076637 [Benincasa hispida] >XP_038886444.1 unchara... [more]
XP_004152600.12.6e-9298.25uncharacterized protein LOC101213956 [Cucumis sativus] >XP_031736756.1 uncharact... [more]
XP_008444920.12.6e-9297.66PREDICTED: uncharacterized protein LOC103488121 [Cucumis melo] >XP_008444921.1 P... [more]
XP_022997281.19.4e-8794.15uncharacterized protein LOC111492231 isoform X2 [Cucurbita maxima][more]
XP_023545352.11.2e-8693.57uncharacterized protein LOC111804795 isoform X2 [Cucurbita pepo subsp. pepo][more]
BLAST of CcUC08G155700 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CcUC08G155700 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3BB051.2e-9297.66uncharacterized protein LOC103488121 OS=Cucumis melo OX=3656 GN=LOC103488121 PE=... [more]
A0A6J1K7304.5e-8794.15uncharacterized protein LOC111492231 isoform X2 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HCV71.0e-8693.57uncharacterized protein LOC111462457 isoform X2 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1KDE33.9e-8694.19uncharacterized protein LOC111492231 isoform X1 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1HCV28.6e-8693.60uncharacterized protein LOC111462457 isoform X1 OS=Cucurbita moschata OX=3662 GN... [more]
BLAST of CcUC08G155700 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G65480.14.9e-1736.99unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT4G38060.26.4e-1740.60unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT4G38060.11.5e-1038.05unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34464:SF5SUBFAMILY NOT NAMEDcoord: 72..241
NoneNo IPR availablePANTHERPTHR34464OS09G0376300 PROTEINcoord: 72..241

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G155700.1CcUC08G155700.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032259 methylation
molecular_function GO:0008168 methyltransferase activity