CcUC08G155690 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G155690
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	TPR_REGION domain-containing protein
Location	CicolChr08: 24129551 .. 24130186 (-)
RNA-Seq Expression	CcUC08G155690
Synteny	CcUC08G155690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTGATGTTCCTCGCTATGCATAACATTCCACAGAGATACTTTGCCAAGCTCCGATTGCGCTTTCGATCTGACGTGGAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACGTCGTTAGCGGAAGAAGTCGTAGCGGAAGCCAATAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAAGCTCTGGCTCTCGACATTCAAGGATTTAAAACCTCTGCTCTGGAATCTCTCGATACGGCTCTGTCGCCGCTCGTCGCTAAGTCGCTCAGCGACGAGGAGCAAGGCGACGCGTTGCTCAAGCGAGCTGAGTTGAAGATGTCCACGAACCGGCGAGCCCTAGTTGACTCGGCTTTGGCCGACTTGACCGAGTCCGTGACACTGAGTCCCAATGCAAATTCCTACTATTGGTTGGGGAAATGCTACGAGATCAAGAAACTGAGAGGAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCAACGCTCGGGAGGCATTGGAACGTCTATCATCATCGTAA

mRNA sequence

ATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTGATGTTCCTCGCTATGCATAACATTCCACAGAGATACTTTGCCAAGCTCCGATTGCGCTTTCGATCTGACGTGGAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACGTCGTTAGCGGAAGAAGTCGTAGCGGAAGCCAATAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAAGCTCTGGCTCTCGACATTCAAGGATTTAAAACCTCTGCTCTGGAATCTCTCGATACGGCTCTGTCGCCGCTCGTCGCTAAGTCGCTCAGCGACGAGGAGCAAGGCGACGCGTTGCTCAAGCGAGCTGAGTTGAAGATGTCCACGAACCGGCGAGCCCTAGTTGACTCGGCTTTGGCCGACTTGACCGAGTCCGTGACACTGAGTCCCAATGCAAATTCCTACTATTGGTTGGGGAAATGCTACGAGATCAAGAAACTGAGAGGAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCAACGCTCGGGAGGCATTGGAACGTCTATCATCATCGTAA

Coding sequence (CDS)

ATGGTGACCGACATACTTCTTCAAATTGCTCTCATCCTCGTAATGGTCGTGATGTTCCTCGCTATGCATAACATTCCACAGAGATACTTTGCCAAGCTCCGATTGCGCTTTCGATCTGACGTGGAATCCAAACGCCACTTCGTGAGAGGCGCTCAGCTTCTCGCTCGAGCGAGATCTGCTCCGTCGCGCTCCTCGGCCACGTCGTTAGCGGAAGAAGTCGTAGCGGAAGCCAATAAGGCCATCGCTCTCGATCCTAAGGATGCCGCTGCTCACATCCTCAAAGCTCTGGCTCTCGACATTCAAGGATTTAAAACCTCTGCTCTGGAATCTCTCGATACGGCTCTGTCGCCGCTCGTCGCTAAGTCGCTCAGCGACGAGGAGCAAGGCGACGCGTTGCTCAAGCGAGCTGAGTTGAAGATGTCCACGAACCGGCGAGCCCTAGTTGACTCGGCTTTGGCCGACTTGACCGAGTCCGTGACACTGAGTCCCAATGCAAATTCCTACTATTGGTTGGGGAAATGCTACGAGATCAAGAAACTGAGAGGAGAGGCCAAGAAAGCATATGAAGAAGCTTTGAATATCGAACCACGATTATCCAACGCTCGGGAGGCATTGGAACGTCTATCATCATCGTAA

Protein sequence

MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVAKSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKLRGEAKKAYEEALNIEPRLSNAREALERLSSS

Homology

[Close]

BLAST of CcUC08G155690 vs. NCBI nr
Match: XP_038884950.1 (uncharacterized protein LOC120075535 [Benincasa hispida])

HSP 1 Score: 364.4 bits (934), Expect = 6.7e-97
Identity = 205/211 (97.16%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MVTDILLQI LILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIVLILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEA+KAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYEIKKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEIKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           RGEAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CcUC08G155690 vs. NCBI nr
Match: XP_008444918.1 (PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo] >KAA0065098.1 TPR domain protein [Cucumis melo var. makuwa])

HSP 1 Score: 363.2 bits (931), Expect = 1.5e-96
Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE+KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CcUC08G155690 vs. NCBI nr
Match: XP_004152601.1 (uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hypothetical protein Csa_021843 [Cucumis sativus])

HSP 1 Score: 360.9 bits (925), Expect = 7.4e-96
Identity = 204/211 (96.68%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CcUC08G155690 vs. NCBI nr
Match: XP_023537835.1 (uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348.6 bits (893), Expect = 3.8e-92
Identity = 196/211 (92.89%), Postives = 204/211 (96.68%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLS+EE+GDAL KRAELKMSTNRRA+VDSALADLTESVTLS NAN+Y WLGKCYE+KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           RGEAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of CcUC08G155690 vs. NCBI nr
Match: XP_022951869.1 (uncharacterized protein LOC111454602 [Cucurbita moschata] >KAG6585344.1 hypothetical protein SDJN03_18077, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 347.1 bits (889), Expect = 1.1e-91
Identity = 195/211 (92.42%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLS+EE+GDAL KRAELKMSTNRR +VDSALADLTESVTLS NAN+Y WLGKCYE+KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           RGEAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of CcUC08G155690 vs. ExPASy TrEMBL
Match: A0A5A7VBU3 (TPR domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004320 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.2e-97
Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE+KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CcUC08G155690 vs. ExPASy TrEMBL
Match: A0A1S3BC86 (uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=4 SV=1)

HSP 1 Score: 363.2 bits (931), Expect = 7.2e-97
Identity = 204/211 (96.68%), Postives = 208/211 (98.58%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD+QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDVQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE+KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CcUC08G155690 vs. ExPASy TrEMBL
Match: A0A0A0LPL8 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 PE=4 SV=1)

HSP 1 Score: 360.9 bits (925), Expect = 3.6e-96
Identity = 204/211 (96.68%), Postives = 206/211 (97.63%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRS+VESKRHFVRGAQLLARARSA
Sbjct: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSNVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALD QGFKTSALESLDTALSPLVA
Sbjct: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDTQGFKTSALESLDTALSPLVA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLSDEE+GDAL KRAELKMSTNRRALVDSALADLTESVTLS NANSYYWLGKCYE KKL
Sbjct: 121 KSLSDEERGDALFKRAELKMSTNRRALVDSALADLTESVTLSQNANSYYWLGKCYETKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           R EAKKAYEEALNIEPRLSNAREALERLSSS
Sbjct: 181 REEAKKAYEEALNIEPRLSNAREALERLSSS 211

[Close]

BLAST of CcUC08G155690 vs. ExPASy TrEMBL
Match: A0A6J1GK03 (uncharacterized protein LOC111454602 OS=Cucurbita moschata OX=3662 GN=LOC111454602 PE=4 SV=1)

HSP 1 Score: 347.1 bits (889), Expect = 5.3e-92
Identity = 195/211 (92.42%), Postives = 203/211 (96.21%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLS+EE+GDAL KRAELKMSTNRR +VDSALADLTESVTLS NAN+Y WLGKCYE+KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRTVVDSALADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           RGEAKKAYEEALNIEPRLS AREALERLSSS
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSSS 211

[Close]

BLAST of CcUC08G155690 vs. ExPASy TrEMBL
Match: A0A6J1KRQ5 (uncharacterized protein LOC111496615 OS=Cucurbita maxima OX=3661 GN=LOC111496615 PE=4 SV=1)

HSP 1 Score: 346.7 bits (888), Expect = 7.0e-92
Identity = 194/211 (91.94%), Postives = 204/211 (96.68%), Query Frame = 0


Query: 1   MVTDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSA 60
           MV DILLQIALILVMVVMFLAMHNIPQR+FAKLR RFRSDVESKRHFVRGAQLLARARSA
Sbjct: 1   MVADILLQIALILVMVVMFLAMHNIPQRFFAKLRFRFRSDVESKRHFVRGAQLLARARSA 60

Query: 61  PSRSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVA 120
           PSRSSATSLAE+VVAEA+KAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPL A
Sbjct: 61  PSRSSATSLAEQVVAEADKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLAA 120

Query: 121 KSLSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTLSPNANSYYWLGKCYEIKKL 180
           KSLS+EE+GDAL KRAELKMSTNRRA+VDSA+ADLTESVTLS NAN+Y WLGKCYE+KKL
Sbjct: 121 KSLSNEERGDALYKRAELKMSTNRRAVVDSAMADLTESVTLSQNANAYCWLGKCYEMKKL 180

Query: 181 RGEAKKAYEEALNIEPRLSNAREALERLSSS 212
           RGEAKKAYEEALNIEPRLS AREALERLS+S
Sbjct: 181 RGEAKKAYEEALNIEPRLSKAREALERLSTS 211

[Close]

BLAST of CcUC08G155690 vs. TAIR 10
Match: AT5G65520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.7e-34
Identity = 87/201 (43.28%), Postives = 135/201 (67.16%), Query Frame = 0


Query: 3   TDILLQIALILVMVVMFLAMHNIPQRYFAKLRLRFRSDVESKRHFVRGAQLLARARSAPS 62
           T+ ++Q A++++ +VMF A+  + QR   K R + R+ ++++R  ++ ++LLARAR+ P 
Sbjct: 4   TETIIQGAILVLTLVMFWAIKYLSQRGLTKFRTKHRATLQTQRQLIQASRLLARARTTPK 63

Query: 63  RSSATSLAEEVVAEANKAIALDPKDAAAHILKALALDIQGFKTSALESLDTALSPLVAKS 122
           +S + SLA+  + EA+  IA+ P DAA HI++ALALD+ G  TSAL+S D AL+    KS
Sbjct: 64  KSQSQSLAKTALTEADNVIAISPDDAAGHIVRALALDLLGHHTSALKSFDMALTYPRLKS 123

Query: 123 LSDEEQGDALLKRAELKMSTNRRALVDSALADLTESVTL---SPNANSYYWLGKCYEIKK 182
           LS  E+ DAL+KRAE+K++ NRR  +DSA+ DL E+V L   +  A  +  LG+CYE K 
Sbjct: 124 LSVGERADALVKRAEMKLAVNRRRRIDSAVEDLEEAVRLAAGTDTARLFRLLGECYEFKG 183

Query: 183 LRGEAKKAYEEALNIEPRLSN 201
           L+ +A+ A+ EAL  +P   N
Sbjct: 184 LKEKAQWAFNEALKAQPSSVN 204

The following BLAST results are available for this feature:

BLAST of CcUC08G155690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038884950.1	6.7e-97	97.16	uncharacterized protein LOC120075535 [Benincasa hispida]	[more]
XP_008444918.1	1.5e-96	96.68	PREDICTED: uncharacterized protein LOC103488119 [Cucumis melo] >KAA0065098.1 TPR...	[more]
XP_004152601.1	7.4e-96	96.68	uncharacterized protein LOC101214199 [Cucumis sativus] >KGN62747.1 hypothetical ...	[more]
XP_023537835.1	3.8e-92	92.89	uncharacterized protein LOC111798743 [Cucurbita pepo subsp. pepo]	[more]
XP_022951869.1	1.1e-91	92.42	uncharacterized protein LOC111454602 [Cucurbita moschata] >KAG6585344.1 hypothet...	[more]

BLAST of CcUC08G155690 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC08G155690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VBU3	7.2e-97	96.68	TPR domain protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00...	[more]
A0A1S3BC86	7.2e-97	96.68	uncharacterized protein LOC103488119 OS=Cucumis melo OX=3656 GN=LOC103488119 PE=...	[more]
A0A0A0LPL8	3.6e-96	96.68	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G370460 ...	[more]
A0A6J1GK03	5.3e-92	92.42	uncharacterized protein LOC111454602 OS=Cucurbita moschata OX=3662 GN=LOC1114546...	[more]
A0A6J1KRQ5	7.0e-92	91.94	uncharacterized protein LOC111496615 OS=Cucurbita maxima OX=3661 GN=LOC111496615...	[more]

BLAST of CcUC08G155690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G65520.1	1.7e-34	43.28	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 122..211 e-value: 6.9E-10 score: 40.7
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 46..121 e-value: 3.7E-5 score: 25.5
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 71..199
IPR019734	Tetratricopeptide repeat	PFAM	PF13181	TPR_8	coord: 165..196 e-value: 3.0E-5 score: 23.9
IPR019734	Tetratricopeptide repeat	PROSITE	PS50005	TPR	coord: 165..198 score: 9.2929
None	No IPR available	PANTHER	PTHR26312:SF163	SUBFAMILY NOT NAMED	coord: 4..208
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 4..208

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G155690.1	CcUC08G155690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding
molecular_function	GO:0016740	transferase activity