CcUC08G155600 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G155600
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	BnaC07g27580D protein
Location	CicolChr08: 24013534 .. 24014826 (-)
RNA-Seq Expression	CcUC08G155600
Synteny	CcUC08G155600

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAGATAGCAAGATAAGCCATGGATGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGATGGTGCAGTTGCGTTTCCCGGCCAGAAACAAGAAGCGTCGGTGATGGATCGCGTTAAGAAGGGATGCACCTCATTTTATGCGTCTTCCGAAGAGACGCTGCGATATGTCAAAGCCTTTTTCGTTGGTTGGGTTAGTTCTTTTGGTTAAAGTTAAAAGTACTCAATATGAGGTTTTTAGTCTTAGTCCCCGTACTTGGTTTTGGTGTTGAGTAATATCTAATTTTGGTCTATGTATTTTTATTAATTCCTAATTTTCATGGCCAAATAATTATTACAATTTTCACATGGTAAATAAGTTTTTAAAATAATAGATAAAAAAAAAAAAAACAACAAATTAGTAGAAGAGTCTTGAGATGTATGAAATTCTAAGGACCGAAGATTAGACATTCTTGAGAAGTAAGAAGACTAAAATTAAACAAACTCTCGATTACACTAGAAATAATATTTTAACCTATTGTAACTCTGTCTCCGTTCAATTATAGATGTAAGGCCTGTTTGAATGATCTTTATAGTAGTAGCAAGAACGAGTAAAAAATTCTAAACATAAAAGAATGCGAGAGTGATATCCTTAGGGTGCGCAATGGTCAAAGATGATATATTTCATCGACAGATTTTTGTATAGTGACCCTTACACATGCGATTGTTGACTCACCCTCATAAAACAAAACTACATTGAAACGTAATTTTGCATTTTATAACCTATTGTGTTAGGGATGTTCAGGTCCATTGTAGCCCTAACACAATGATTATGTCGCAACGGTTGTGATTCAATGCGAATATTGTGCTTGAATGGTGAAAAATAAGGAACGTTATGAATATGGCATGGTGTAGTGATATAAGCGGAAGGTGAGGGCAGGTGAGAGGGTTATCCCTAGAAAAAAGAAAGAACTTTCATTTGTCCTCTTTGGGACATCACTCTCCATGGACGGCTTTGTATTAGTTTAGGAAGGAAAAGAAAAAGGTGTTTTAATCCAAACATGTATTTAAAGTGATTCCAAATAGAGGAGGAAGGTTATTAGTTTTAAGAGGGGATGTTTGATTGGGCAGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGCGGCAGAAGCAGATTTAAAGACCGCCAAGATGCAGGTTCAAGCTACTGAGGACGCAGAGAACACCAAGAAACGAACTTAATTAACAAATTTAAATATCTGAATCTTTTGTATTTCGGCTGTTACAATTTGCATATAAATATATTTTGGAATTA

mRNA sequence

GAGATAGCAAGATAAGCCATGGATGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGATGGTGCAGTTGCGTTTCCCGGCCAGAAACAAGAAGCGTCGGTGATGGATCGCGTTAAGAAGGGATGCACCTCATTTTATGCGTCTTCCGAAGAGACGCTGCGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGCGGCAGAAGCAGATTTAAAGACCGCCAAGATGCAGGTTCAAGCTACTGAGGACGCAGAGAACACCAAGAAACGAACTTAATTAACAAATTTAAATATCTGAATCTTTTGTATTTCGGCTGTTACAATTTGCATATAAATATATTTTGGAATTA

Coding sequence (CDS)

ATGGATGAGATTAGAGCTTCTTCAACGCCGCCGCAAGACGATGGTGCAGTTGCGTTTCCCGGCCAGAAACAAGAAGCGTCGGTGATGGATCGCGTTAAGAAGGGATGCACCTCATTTTATGCGTCTTCCGAAGAGACGCTGCGATATGTCAAAGCCTTTTTCGTTGGTTGGGGAAAGAAGATGACAGCAAAGAGCGAGAAGGAAGCGGCAGAAGCAGATTTAAAGACCGCCAAGATGCAGGTTCAAGCTACTGAGGACGCAGAGAACACCAAGAAACGAACTTAA

Protein sequence

MDEIRASSTPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKMQVQATEDAENTKKRT

Homology

[Close]

BLAST of CcUC08G155600 vs. NCBI nr
Match: KAA0065108.1 (hypothetical protein E6C27_scaffold82G004430 [Cucumis melo var. makuwa])

HSP 1 Score: 150.2 bits (378), Expect = 8.8e-33
Identity = 82/95 (86.32%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 1  MDEIR-ASSTPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVGWGK 60
          MDE R A+STPPQDDGA AF G+KQEASVMDRVKKGCTSFYASS+ETL YVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KMTAKSEKEAAEADLKTAKMQVQATEDAENTKKRT 95
          K+TAKSEKEAAEADLKTAKMQVQATE AEN K  T
Sbjct: 61 KITAKSEKEAAEADLKTAKMQVQATEAAENLKNGT 95

[Close]

BLAST of CcUC08G155600 vs. NCBI nr
Match: XP_008444894.1 (PREDICTED: uncharacterized protein LOC103488109 [Cucumis melo])

HSP 1 Score: 149.1 bits (375), Expect = 2.0e-32
Identity = 81/95 (85.26%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 1  MDEIR-ASSTPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVGWGK 60
          MDE R A+STPPQDDGA AF G+KQEASVMDRVKKGCTSFYASS+ETL YVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KMTAKSEKEAAEADLKTAKMQVQATEDAENTKKRT 95
          K+TAKSEKEAAEADL+TAKMQVQATE AEN K  T
Sbjct: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 95

[Close]

BLAST of CcUC08G155600 vs. NCBI nr
Match: XP_038886259.1 (uncharacterized protein LOC120076486 [Benincasa hispida])

HSP 1 Score: 147.9 bits (372), Expect = 4.4e-32
Identity = 80/92 (86.96%), Postives = 83/92 (90.22%), Query Frame = 0


Query: 1  MDEIRASSTPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVGWGKK 60
          MDEIRASSTPPQDDGA  F G+KQEASVMD VKKG   F ASS+ETLRYVKAFFVGWGKK
Sbjct: 1  MDEIRASSTPPQDDGAGTFSGRKQEASVMDGVKKGWRFFCASSQETLRYVKAFFVGWGKK 60

Query: 61 MTAKSEKEAAEADLKTAKMQVQATEDAENTKK 93
          MTAKSEKEAAEADLKTAKMQVQATE AENTK+
Sbjct: 61 MTAKSEKEAAEADLKTAKMQVQATEAAENTKR 92

[Close]

BLAST of CcUC08G155600 vs. NCBI nr
Match: XP_023001883.1 (uncharacterized protein LOC111495934 [Cucurbita maxima])

HSP 1 Score: 143.3 bits (360), Expect = 1.1e-30
Identity = 77/94 (81.91%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MDEIRASSTPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVGWGKK 60
          MDEIRAS+ P QDDGA  F G K+EASVMDRVKKGC + YASS+E LRYVKAFFVGWGKK
Sbjct: 1  MDEIRASTPPLQDDGAGRFSGWKEEASVMDRVKKGCMAVYASSQEALRYVKAFFVGWGKK 60

Query: 61 MTAKSEKEAAEADLKTAKMQVQATEDAENTKKRT 95
          MTAKSEKEAAEADLK AKMQV+ATE AENTKK T
Sbjct: 61 MTAKSEKEAAEADLKMAKMQVEATEAAENTKKGT 94

[Close]

BLAST of CcUC08G155600 vs. NCBI nr
Match: XP_022951050.1 (uncharacterized protein LOC111454014 [Cucurbita moschata] >KAG6585352.1 hypothetical protein SDJN03_18085, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 138.7 bits (348), Expect = 2.7e-29
Identity = 76/98 (77.55%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 1  MDEIRASS----TPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVG 60
          MDEIRAS+     PPQD+GA  F G K+EASVMDRVKKGC + YASS+E LRYVKAFFVG
Sbjct: 1  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVG 60

Query: 61 WGKKMTAKSEKEAAEADLKTAKMQVQATEDAENTKKRT 95
          WGKKMTAKSEKEAAEADLK AKMQV+ATE AEN KK T
Sbjct: 61 WGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT 98

[Close]

BLAST of CcUC08G155600 vs. ExPASy TrEMBL
Match: A0A5A7VBV2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004430 PE=4 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 4.3e-33
Identity = 82/95 (86.32%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 1  MDEIR-ASSTPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVGWGK 60
          MDE R A+STPPQDDGA AF G+KQEASVMDRVKKGCTSFYASS+ETL YVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KMTAKSEKEAAEADLKTAKMQVQATEDAENTKKRT 95
          K+TAKSEKEAAEADLKTAKMQVQATE AEN K  T
Sbjct: 61 KITAKSEKEAAEADLKTAKMQVQATEAAENLKNGT 95

[Close]

BLAST of CcUC08G155600 vs. ExPASy TrEMBL
Match: A0A1S3BC67 (uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=4 SV=1)

HSP 1 Score: 149.1 bits (375), Expect = 9.5e-33
Identity = 81/95 (85.26%), Postives = 86/95 (90.53%), Query Frame = 0


Query: 1  MDEIR-ASSTPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVGWGK 60
          MDE R A+STPPQDDGA AF G+KQEASVMDRVKKGCTSFYASS+ETL YVKAFFVGWGK
Sbjct: 1  MDETRAATSTPPQDDGARAFSGRKQEASVMDRVKKGCTSFYASSQETLGYVKAFFVGWGK 60

Query: 61 KMTAKSEKEAAEADLKTAKMQVQATEDAENTKKRT 95
          K+TAKSEKEAAEADL+TAKMQVQATE AEN K  T
Sbjct: 61 KITAKSEKEAAEADLRTAKMQVQATEAAENLKNGT 95

[Close]

BLAST of CcUC08G155600 vs. ExPASy TrEMBL
Match: A0A6J1KRV8 (uncharacterized protein LOC111495934 OS=Cucurbita maxima OX=3661 GN=LOC111495934 PE=4 SV=1)

HSP 1 Score: 143.3 bits (360), Expect = 5.2e-31
Identity = 77/94 (81.91%), Postives = 82/94 (87.23%), Query Frame = 0


Query: 1  MDEIRASSTPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVGWGKK 60
          MDEIRAS+ P QDDGA  F G K+EASVMDRVKKGC + YASS+E LRYVKAFFVGWGKK
Sbjct: 1  MDEIRASTPPLQDDGAGRFSGWKEEASVMDRVKKGCMAVYASSQEALRYVKAFFVGWGKK 60

Query: 61 MTAKSEKEAAEADLKTAKMQVQATEDAENTKKRT 95
          MTAKSEKEAAEADLK AKMQV+ATE AENTKK T
Sbjct: 61 MTAKSEKEAAEADLKMAKMQVEATEAAENTKKGT 94

[Close]

BLAST of CcUC08G155600 vs. ExPASy TrEMBL
Match: A0A6J1GHI8 (uncharacterized protein LOC111454014 OS=Cucurbita moschata OX=3662 GN=LOC111454014 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.3e-29
Identity = 76/98 (77.55%), Postives = 82/98 (83.67%), Query Frame = 0


Query: 1  MDEIRASS----TPPQDDGAVAFPGQKQEASVMDRVKKGCTSFYASSEETLRYVKAFFVG 60
          MDEIRAS+     PPQD+GA  F G K+EASVMDRVKKGC + YASS+E LRYVKAFFVG
Sbjct: 1  MDEIRASTPPPPPPPQDEGAGRFSGSKEEASVMDRVKKGCRAVYASSQEALRYVKAFFVG 60

Query: 61 WGKKMTAKSEKEAAEADLKTAKMQVQATEDAENTKKRT 95
          WGKKMTAKSEKEAAEADLK AKMQV+ATE AEN KK T
Sbjct: 61 WGKKMTAKSEKEAAEADLKMAKMQVEATEAAENAKKGT 98

[Close]

BLAST of CcUC08G155600 vs. ExPASy TrEMBL
Match: A0A6J1BRY6 (uncharacterized protein LOC111005010 OS=Momordica charantia OX=3673 GN=LOC111005010 PE=4 SV=1)

HSP 1 Score: 109.0 bits (271), Expect = 1.1e-20
Identity = 55/65 (84.62%), Postives = 61/65 (93.85%), Query Frame = 0


Query: 29 MDRVKKGCTSFYASSEETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKMQVQATEDAE 88
          MDR+K GC SFYASS+ETLRYVKAFFVGWGKKMTAK+E+EAA+ADLKTAKMQVQATE AE
Sbjct: 1  MDRIKSGCMSFYASSQETLRYVKAFFVGWGKKMTAKTEEEAAKADLKTAKMQVQATEAAE 60

Query: 89 NTKKR 94
          NTK +
Sbjct: 61 NTKNQ 65

[Close]

BLAST of CcUC08G155600 vs. TAIR 10
Match: AT2G38465.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; Has 16 Blast hits to 16 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 71.6 bits (174), Expect = 3.7e-13
Identity = 39/67 (58.21%), Postives = 47/67 (70.15%), Query Frame = 0


Query: 27 SVMDRVKKGCTSFYASSEETLRYVKAFFVGWGKKMTAKSEKEAAEADLKTAKMQVQATED 86
          S+ DRVK  C S   + +E   YVKAFFVG  K++TAK+EKEA EA L   KMQV AT++
Sbjct: 13 SLSDRVKTNCLSMAVTCQEGFSYVKAFFVGQTKRLTAKNEKEATEAHLTETKMQVDATDE 72

Query: 87 AENTKKR 94
          AEN KKR
Sbjct: 73 AENAKKR 79

The following BLAST results are available for this feature:

BLAST of CcUC08G155600 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0065108.1	8.8e-33	86.32	hypothetical protein E6C27_scaffold82G004430 [Cucumis melo var. makuwa]	[more]
XP_008444894.1	2.0e-32	85.26	PREDICTED: uncharacterized protein LOC103488109 [Cucumis melo]	[more]
XP_038886259.1	4.4e-32	86.96	uncharacterized protein LOC120076486 [Benincasa hispida]	[more]
XP_023001883.1	1.1e-30	81.91	uncharacterized protein LOC111495934 [Cucurbita maxima]	[more]
XP_022951050.1	2.7e-29	77.55	uncharacterized protein LOC111454014 [Cucurbita moschata] >KAG6585352.1 hypothet...	[more]

BLAST of CcUC08G155600 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC08G155600 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VBV2	4.3e-33	86.32	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3BC67	9.5e-33	85.26	uncharacterized protein LOC103488109 OS=Cucumis melo OX=3656 GN=LOC103488109 PE=...	[more]
A0A6J1KRV8	5.2e-31	81.91	uncharacterized protein LOC111495934 OS=Cucurbita maxima OX=3661 GN=LOC111495934...	[more]
A0A6J1GHI8	1.3e-29	77.55	uncharacterized protein LOC111454014 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1BRY6	1.1e-20	84.62	uncharacterized protein LOC111005010 OS=Momordica charantia OX=3673 GN=LOC111005...	[more]

BLAST of CcUC08G155600 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G38465.1	3.7e-13	58.21	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 60..87
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G155600.1	CcUC08G155600.1	mRNA