CcUC08G155300 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G155300
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
Descriptioncytochrome c oxidase subunit 6b-1-like
LocationCicolChr08: 23679116 .. 23681815 (+)
RNA-Seq ExpressionCcUC08G155300
SyntenyCcUC08G155300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
CGGCTGGAATCATCGGAACCAGTGAGTGGTCAATCTTAACCTAACCAACGGGTTAGTGTTTGTTCCTCTCTGCTTTGCTTTGCCCTGCCGCCCGCCTCTGATCTCGAATCGTTGGGCTTGTACCTGCAACTGAAGCCGATCGCTTCTTCTTCTTCCATCCATGGCGGAAGCCCAGAGCGAAAAAACCCCTTCCTTAACTGAGGTATTCTTTTTGCAGCTTTCACTATCTCAAATTTCTTCGCTATACCTAAAACTTTGTTTTAGCTACCTCCTTCCTTCTTTTTTGTAATTTTTTCGTGGGTAATGCACTTTAATTGCTCGATTCGCAATTGATTTTGATGGATCTGTTGTTATATGGTAGGAATTCTTCAATTATGAAGACATGTGGGGTTTTTAGCGGTAAATTCATACTTTTTGTTTAGGAAAAAAATTGTAGAGCTGTGGTAAATTCCCTGGATTAGATCCCCAGATTCCACTGGAAATAGAAATAGTTGTGAGTTCCATTAGCATGACTGGATTCGCCGGTTTCGACTCCAATAAATGGTTGGAGAATCCTTCCTTTGTCCTGGTGGCTTGTTTTGCTGTCTTTATATCCTTTTTTTTTTTTAGGAGATCAATATGGTTGAGTCAAATTTTCTTCTTAACTAGAACTCAGTGCAAAATCACCGATTGCAGGCTTGAACCTTATGAGTCATGGTAAATTTAGTTATATTTCAAAACTCCCCTCAGGCCCTCACTGCAGGCTTGAAGATTTATAAAATGACCAACAAGTGAAAATCAGTATTAGTTGAGGTGGAAATAATATTATAGAGGTTTAAACACAAGGCCTCATGTTAGGTCTTATGTTCTGATACTATATCAAACCATCGATCAACCTAAAAGGTTAAGCTCCTAAGCTAATGAATCATGGTAAATTTAATTATATCATACTTCAATACTCTCCCAACACTGAGCAATGAACTCTGTTGGCGCATGTTTCAGTTGGTTTGTTATATGAATCGTGGGAGCTTCTGGTGCCTTACAATTTCTCTGCGGTATTGTGTTTTTAGAGATGAAAGCAATTTTACCCTTAAGAGCATAGTGAGAAGCACGTCTTCGGTTATTATCGTTCTCATTTAGGGACGTTGTCATAGTCTCCTAGAGCCTGTCCCCTTTGCTTTTACAAATTCTAAACCTGGTAATGTTTCGATCTGAGAATTGAGAATAACTTTCTGTTAATTTGGCTTGAAGCAATATGCCTTGAAAGAAAATGAGAAGGTGGATATACCAAAGCCCTCTGAAGTAAAAGAGGTGGAGAACCCTGAAAATGCTGCTCCTGCTGAAGTTGTTGTGAAGAATGATGAACCACCTGTTGAAGCTGATGCTGATCAAGGGAGTGACAATTCTCCTGCTCAAGAAAACAATGGAGATGCTCCAGCAGCTGCTGCTGTAGAGGACGTTGAAACCAGTCCTGCTGCTGAAAATGACAGTGGAGCTGCCGATGAAAGTAGTGGAGCTGGAGAAGAGGAAAATTCTGGGGATCAAGAAAGCACCGATGAGCAACCTGAGATTAAGGTTGCTGCCCTGAGGAATTATCAACAATGCTTTTGTTTACTTTTGTATATATTGTTTGTTCATTGTTTTGTTTCTCTCATATGCAGCTCGAAACAGCACCAGTAGATTTCCGTTTCCCTACTACAAATCAAACTAGGCATTGCTTCACCCGCTACATTGAGTACCACAGGTAACTGATATGTTCTTTCCTACATATTTTTTTTGTCATTTCTTGGTCCTGTCATAATTTAGATGAACTTTCTTGAGAGTATGTGCTTATCATTGTGATGCGTACAGATGCATACAAGCGAAAGGGGAAGGTGCTCCGGAGTGCAACAAGTTTGCGAAATATTATCGTTCTCTTTGCCCAAGTGAATGGGTATGCGCTTATCCTAAAATCCTTGTTGGATTCATTTCGTTCACTTATTTTCTGTTTTTAGAGCATTCAAAAACACATCTGCTCAACCTTTTAGGAATTTGTTTTATGCTCAGAACACATTCCGTTCACAAGTGGTCGAATCGACATAATGTTATTTTGTGTCATTAATTTAGTTTGAGCAGTAAGGGTTCATGATGAATGATCAAATACACTGCTTAATCCAATCGTTTGCCTCTTCAAAACCATTATGCTGTGTTCATGTCTGATGCTGTTTTGCCAGTAATGTGTACTCGTAATCAATGGATAATGCATCAGTTTCTCGCGAATACTTCGGTGAATTATGTCAAAAGCTCATTAAAGTTTGGTCATAATATGGTTATAGTAACGCCGTGTATTGTGATAATTGTTGCAGGTAGAGAAGTGGAACGAGCAGAGGGAGAATGGAACCTTCCCGGGTCCGCTGTAGGAGTAAAAATTTAGCAGGCAGTTCGCCACACGCTGCCGTACCAAGGCAAATAAACTCTGGGGAATGTTCTCTTTCGAACAATTGAGTTACAATAATTTTCGGCTGTTTTTGGTATTTTATTCAAAATCCATTTGCAAGCAAGTTTTGTTGATGCAACCGCATCATTGTTCCTGATTAACATGCCAAATCGTTTTTCTTATCTAGATCTTGTTTCATCAAATTACATGGAGCTGGAAGCACTCCTGTAAGACCGCCATCTTATATGTGCACTGATTGATGCATTTATGAAAATTTACAATAAGCTGTTGAAATTAATCCGAAT

mRNA sequence

CGGCTGGAATCATCGGAACCAGTGAGTGGTCAATCTTAACCTAACCAACGGGTTAGTGTTTGTTCCTCTCTGCTTTGCTTTGCCCTGCCGCCCGCCTCTGATCTCGAATCGTTGGGCTTGTACCTGCAACTGAAGCCGATCGCTTCTTCTTCTTCCATCCATGGCGGAAGCCCAGAGCGAAAAAACCCCTTCCTTAACTGAGAGCTGTGGTAAATTCCCTGGATTAGATCCCCAGATTCCACTGGAAATAGAAATAGTTGTGAGTTCCATTAGCATGACTGGATTCGCCGGTTTCGACTCCAATAAATGGTTGGAGAATCCTTCCTTTGTCCTGCAATATGCCTTGAAAGAAAATGAGAAGGTGGATATACCAAAGCCCTCTGAAGTAAAAGAGGTGGAGAACCCTGAAAATGCTGCTCCTGCTGAAGTTGTTGTGAAGAATGATGAACCACCTGTTGAAGCTGATGCTGATCAAGGGAGTGACAATTCTCCTGCTCAAGAAAACAATGGAGATGCTCCAGCAGCTGCTGCTGTAGAGGACGTTGAAACCAGTCCTGCTGCTGAAAATGACAGTGGAGCTGCCGATGAAAGTAGTGGAGCTGGAGAAGAGGAAAATTCTGGGGATCAAGAAAGCACCGATGAGCAACCTGAGATTAAGCTCGAAACAGCACCAGTAGATTTCCGTTTCCCTACTACAAATCAAACTAGGCATTGCTTCACCCGCTACATTGAGTACCACAGATGCATACAAGCGAAAGGGGAAGGTGCTCCGGAGTGCAACAAGTTTGCGAAATATTATCGTTCTCTTTGCCCAAGTGAATGGGTAGAGAAGTGGAACGAGCAGAGGGAGAATGGAACCTTCCCGGGTCCGCTATCTTGTTTCATCAAATTACATGGAGCTGGAAGCACTCCTGTAAGACCGCCATCTTATATGTGCACTGATTGATGCATTTATGAAAATTTACAATAAGCTGTTGAAATTAATCCGAAT

Coding sequence (CDS)

ATGGCGGAAGCCCAGAGCGAAAAAACCCCTTCCTTAACTGAGAGCTGTGGTAAATTCCCTGGATTAGATCCCCAGATTCCACTGGAAATAGAAATAGTTGTGAGTTCCATTAGCATGACTGGATTCGCCGGTTTCGACTCCAATAAATGGTTGGAGAATCCTTCCTTTGTCCTGCAATATGCCTTGAAAGAAAATGAGAAGGTGGATATACCAAAGCCCTCTGAAGTAAAAGAGGTGGAGAACCCTGAAAATGCTGCTCCTGCTGAAGTTGTTGTGAAGAATGATGAACCACCTGTTGAAGCTGATGCTGATCAAGGGAGTGACAATTCTCCTGCTCAAGAAAACAATGGAGATGCTCCAGCAGCTGCTGCTGTAGAGGACGTTGAAACCAGTCCTGCTGCTGAAAATGACAGTGGAGCTGCCGATGAAAGTAGTGGAGCTGGAGAAGAGGAAAATTCTGGGGATCAAGAAAGCACCGATGAGCAACCTGAGATTAAGCTCGAAACAGCACCAGTAGATTTCCGTTTCCCTACTACAAATCAAACTAGGCATTGCTTCACCCGCTACATTGAGTACCACAGATGCATACAAGCGAAAGGGGAAGGTGCTCCGGAGTGCAACAAGTTTGCGAAATATTATCGTTCTCTTTGCCCAAGTGAATGGGTAGAGAAGTGGAACGAGCAGAGGGAGAATGGAACCTTCCCGGGTCCGCTATCTTGTTTCATCAAATTACATGGAGCTGGAAGCACTCCTGTAAGACCGCCATCTTATATGTGCACTGATTGA

Protein sequence

MAEAQSEKTPSLTESCGKFPGLDPQIPLEIEIVVSSISMTGFAGFDSNKWLENPSFVLQYALKENEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNSPAQENNGDAPAAAAVEDVETSPAAENDSGAADESSGAGEEENSGDQESTDEQPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQRENGTFPGPLSCFIKLHGAGSTPVRPPSYMCTD
Homology
[Close]
BLAST of CcUC08G155300 vs. NCBI nr
Match: XP_038886001.1 (cytochrome c oxidase subunit 6b-1-like [Benincasa hispida])

HSP 1 Score: 320.1 bits (819), Expect = 1.8e-83
Identity = 168/189 (88.89%), Postives = 176/189 (93.12%), Query Frame = 0 

Query: 52  ENPSFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNS 111
           + PS   QY+LKE  EKVDIP PSEVKEVEN ENAA AEVVVKNDEPPVEA+A+QGSD+S
Sbjct: 8   KTPSLAEQYSLKEKEEKVDIPNPSEVKEVENSENAAHAEVVVKNDEPPVEAEANQGSDDS 67

Query: 112 PAQENNGDAPAAAAVEDVETSPAAENDSGAAD-ESSGAGEEENSGDQESTDEQPEIKLET 171
           PA+ENNGDAPAAAAVED ETSPAAENDSGAAD ESSGAG EENSGDQESTDE+PEIKLET
Sbjct: 68  PAEENNGDAPAAAAVEDSETSPAAENDSGAADEESSGAGGEENSGDQESTDERPEIKLET 127

Query: 172 APVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQR 231
           AP DFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPEC+KFAKYYRSLCPSEWVEKWNEQR
Sbjct: 128 APADFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECDKFAKYYRSLCPSEWVEKWNEQR 187

Query: 232 ENGTFPGPL 239
           ENGTFPGPL
Sbjct: 188 ENGTFPGPL 196

[Close]
BLAST of CcUC08G155300 vs. NCBI nr
Match: XP_004152624.1 (cytochrome c oxidase subunit 6b-1 [Cucumis sativus] >KGN62709.1 hypothetical protein Csa_022497 [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 6.0e-79
Identity = 163/189 (86.24%), Postives = 173/189 (91.53%), Query Frame = 0 

Query: 52  ENPSFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNS 111
           + PS   QY+LKE  EKVDIP+PSEVKEVEN ENAAPAEVVVKNDEPPVEA ADQ SD  
Sbjct: 8   QTPSLSEQYSLKEKEEKVDIPQPSEVKEVENSENAAPAEVVVKNDEPPVEAVADQSSDIP 67

Query: 112 PAQENNGDAPAAAAVEDVETSPAAENDSGAA-DESSGAGEEENSGDQESTDEQPEIKLET 171
           PA+E+NGD+ +AAAVED ETSPAAENDSGAA +ESSGAGEEENSGDQESTDE+PEIKLET
Sbjct: 68  PAEESNGDS-SAAAVEDSETSPAAENDSGAAEEESSGAGEEENSGDQESTDERPEIKLET 127

Query: 172 APVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQR 231
           APVDFRFPTTNQTRHCFTRYIE+HRC QAKGEGAPEC KFAKYYRSLCPSEWVEKWNEQR
Sbjct: 128 APVDFRFPTTNQTRHCFTRYIEFHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQR 187

Query: 232 ENGTFPGPL 239
           ENGTFPGPL
Sbjct: 188 ENGTFPGPL 195

[Close]
BLAST of CcUC08G155300 vs. NCBI nr
Match: XP_008444857.1 (PREDICTED: cytochrome c oxidase subunit 6b-1-like [Cucumis melo] >KAA0065134.1 cytochrome c oxidase subunit 6b-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 297.4 bits (760), Expect = 1.2e-76
Identity = 160/187 (85.56%), Postives = 164/187 (87.70%), Query Frame = 0 

Query: 55  SFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNSPAQ 114
           S   QY+LKE  EKVDIP PSEVKEVEN ENAAPAEVVVKNDEPPVEADADQ SDN PA+
Sbjct: 11  SLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADADQSSDNPPAE 70

Query: 115 ENNGDAPAAAAVEDVETSPAAENDSGAA--DESSGAGEEENSGDQESTDEQPEIKLETAP 174
           E       + AVED ET PAAENDSGAA  +ESSGAGEEENSGDQESTDEQPEIKLETAP
Sbjct: 71  E-------SPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLETAP 130

Query: 175 VDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQREN 234
           VDFRFPTTNQTRHCFTRYIEYHRC QAKGEGAPEC KFAKYYRSLCPSEWVEKWNEQREN
Sbjct: 131 VDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQREN 190

Query: 235 GTFPGPL 239
           GTFPGPL
Sbjct: 191 GTFPGPL 190

[Close]
BLAST of CcUC08G155300 vs. NCBI nr
Match: XP_023547029.1 (cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 288.5 bits (737), Expect = 5.8e-74
Identity = 152/186 (81.72%), Postives = 159/186 (85.48%), Query Frame = 0 

Query: 54  PSFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNSPA 113
           PS   QY+LKE  EKVDIPKPSEVKEV+N ENAAPAEVVVKNDEPPVEADADQGSDN+PA
Sbjct: 10  PSLSEQYSLKEKEEKVDIPKPSEVKEVDNSENAAPAEVVVKNDEPPVEADADQGSDNTPA 69

Query: 114 QENNGDAPAAAAVEDVETSPAAENDSGAADESSGAGEEENSGDQESTDEQPEIKLETAPV 173
            ENNGDA AAAAVED ET+ A             AGEEE SGDQESTDE+PEIKLETAP 
Sbjct: 70  DENNGDASAAAAVEDSETNAA-------------AGEEEISGDQESTDERPEIKLETAPA 129

Query: 174 DFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQRENG 233
           DFRFPTTNQTRHCFTRYIEYHRC QAKGEGAPEC+KFAKYYRSLCP+EWVEKWNEQRENG
Sbjct: 130 DFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEWVEKWNEQRENG 182

Query: 234 TFPGPL 239
            FPGPL
Sbjct: 190 CFPGPL 182

[Close]
BLAST of CcUC08G155300 vs. NCBI nr
Match: KAG6598699.1 (Cytochrome c oxidase subunit 6b-1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 284.6 bits (727), Expect = 8.3e-73
Identity = 151/186 (81.18%), Postives = 157/186 (84.41%), Query Frame = 0 

Query: 54  PSFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNSPA 113
           PS   QY+LKE  EKVDIPKPSEVKEVEN ENA PAEVVVKNDEPPVEADADQGS+N PA
Sbjct: 10  PSLSEQYSLKEKEEKVDIPKPSEVKEVENSENADPAEVVVKNDEPPVEADADQGSNNPPA 69

Query: 114 QENNGDAPAAAAVEDVETSPAAENDSGAADESSGAGEEENSGDQESTDEQPEIKLETAPV 173
            ENNGDA AAAAVED ET+ A             AGEEE SGDQESTDE+PEIKLETAP 
Sbjct: 70  DENNGDASAAAAVEDSETNAA-------------AGEEEISGDQESTDERPEIKLETAPA 129

Query: 174 DFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQRENG 233
           DFRFPTTNQTRHCFTRYIEYHRC QAKGEGAPEC+KFAKYYRSLCP+EWVEKWNEQRENG
Sbjct: 130 DFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEWVEKWNEQRENG 182

Query: 234 TFPGPL 239
            FPGPL
Sbjct: 190 CFPGPL 182

[Close]
BLAST of CcUC08G155300 vs. ExPASy Swiss-Prot
Match: Q9S7L9 (Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=1 SV=1)

HSP 1 Score: 168.3 bits (425), Expect = 1.1e-40
Identity = 104/191 (54.45%), Postives = 129/191 (67.54%), Query Frame = 0 

Query: 52  ENPSFVLQYALKENEKVDI-PKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNS 111
           + PS   QY L++  K D   KP EVKEV  PE    AE  VK ++   E+  ++    S
Sbjct: 8   QTPSLSEQYHLEKEVKQDTSAKPVEVKEVA-PEVTTQAE-EVKTEQAKEESPVEEAV--S 67

Query: 112 PAQENNGDAPAAAAVEDVETSPAAENDSGAADESSGAGEEEN--SGDQESTDEQP-EIKL 171
             +E +  AP +  V     +PAA  D+  A+E+  A EE N  +  +E  +E P EIKL
Sbjct: 68  VVEEKSESAPESTEV--ASEAPAAAEDN--AEETPAAAEENNDENASEEVAEETPDEIKL 127

Query: 172 ETAPVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNE 231
           ETAP DFRFPTTNQTRHCFTRY+EYHRC+ AKG+ APEC+KFAK+YRSLCPSEWV++WNE
Sbjct: 128 ETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVDRWNE 187

Query: 232 QRENGTFPGPL 239
           QRENGTFPGPL
Sbjct: 188 QRENGTFPGPL 190

[Close]
BLAST of CcUC08G155300 vs. ExPASy Swiss-Prot
Match: Q9SUD3 (Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=2 SV=2)

HSP 1 Score: 144.8 bits (364), Expect = 1.4e-33
Identity = 61/77 (79.22%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 162 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEW 221
           + EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRC  AKGE A EC +FAKYYR+LCP EW
Sbjct: 2   EDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEW 61

Query: 222 VEKWNEQRENGTFPGPL 239
           V+KWNEQRE GTFPGPL
Sbjct: 62  VDKWNEQRETGTFPGPL 78

[Close]
BLAST of CcUC08G155300 vs. ExPASy Swiss-Prot
Match: Q945L0 (Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 6.7e-33
Identity = 59/77 (76.62%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 162 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEW 221
           + EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRC  AKGE + +C +FAKYYR+LCP EW
Sbjct: 2   EDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEW 61

Query: 222 VEKWNEQRENGTFPGPL 239
           V+KWNEQRE+GTFPGPL
Sbjct: 62  VDKWNEQRESGTFPGPL 78

[Close]
BLAST of CcUC08G155300 vs. ExPASy Swiss-Prot
Match: O94581 (Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=cox12 PE=3 SV=2)

HSP 1 Score: 106.7 bits (265), Expect = 4.1e-22
Identity = 46/84 (54.76%), Postives = 57/84 (67.86%), Query Frame = 0 

Query: 155 DQESTDEQPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYR 214
           +QE  +   +    T   D RFP TNQT+HCF  YI+Y RCI+AKGE    C +F   Y+
Sbjct: 3   EQEDQEAPKQFTFGTVGFDARFPNTNQTKHCFQSYIDYFRCIKAKGEDFVPCKQFWHAYQ 62

Query: 215 SLCPSEWVEKWNEQRENGTFPGPL 239
           SLCP EWVE+W+EQRENGTFP P+
Sbjct: 63  SLCPMEWVERWDEQRENGTFPAPI 86

[Close]
BLAST of CcUC08G155300 vs. ExPASy Swiss-Prot
Match: Q1K8U2 (Cytochrome c oxidase subunit 12, mitochondrial OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=cox-13 PE=1 SV=1)

HSP 1 Score: 92.8 bits (229), Expect = 6.1e-18
Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 0 

Query: 172 VDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQREN 231
           VD RFP  NQT+HC+  Y++YH+CI AKGE    C +F   YRSLCPS W ++W+EQRE 
Sbjct: 17  VDARFPNVNQTKHCWQNYVDYHKCILAKGEDFAPCRQFWLAYRSLCPSGWYQRWDEQREA 76

Query: 232 GTFP 236
           G FP
Sbjct: 77  GNFP 80

[Close]
BLAST of CcUC08G155300 vs. ExPASy TrEMBL
Match: A0A0A0LNV6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369100 PE=4 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.9e-79
Identity = 163/189 (86.24%), Postives = 173/189 (91.53%), Query Frame = 0 

Query: 52  ENPSFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNS 111
           + PS   QY+LKE  EKVDIP+PSEVKEVEN ENAAPAEVVVKNDEPPVEA ADQ SD  
Sbjct: 8   QTPSLSEQYSLKEKEEKVDIPQPSEVKEVENSENAAPAEVVVKNDEPPVEAVADQSSDIP 67

Query: 112 PAQENNGDAPAAAAVEDVETSPAAENDSGAA-DESSGAGEEENSGDQESTDEQPEIKLET 171
           PA+E+NGD+ +AAAVED ETSPAAENDSGAA +ESSGAGEEENSGDQESTDE+PEIKLET
Sbjct: 68  PAEESNGDS-SAAAVEDSETSPAAENDSGAAEEESSGAGEEENSGDQESTDERPEIKLET 127

Query: 172 APVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQR 231
           APVDFRFPTTNQTRHCFTRYIE+HRC QAKGEGAPEC KFAKYYRSLCPSEWVEKWNEQR
Sbjct: 128 APVDFRFPTTNQTRHCFTRYIEFHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQR 187

Query: 232 ENGTFPGPL 239
           ENGTFPGPL
Sbjct: 188 ENGTFPGPL 195

[Close]
BLAST of CcUC08G155300 vs. ExPASy TrEMBL
Match: A0A5A7VCW9 (Cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004690 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 6.0e-77
Identity = 160/187 (85.56%), Postives = 164/187 (87.70%), Query Frame = 0 

Query: 55  SFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNSPAQ 114
           S   QY+LKE  EKVDIP PSEVKEVEN ENAAPAEVVVKNDEPPVEADADQ SDN PA+
Sbjct: 11  SLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADADQSSDNPPAE 70

Query: 115 ENNGDAPAAAAVEDVETSPAAENDSGAA--DESSGAGEEENSGDQESTDEQPEIKLETAP 174
           E       + AVED ET PAAENDSGAA  +ESSGAGEEENSGDQESTDEQPEIKLETAP
Sbjct: 71  E-------SPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLETAP 130

Query: 175 VDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQREN 234
           VDFRFPTTNQTRHCFTRYIEYHRC QAKGEGAPEC KFAKYYRSLCPSEWVEKWNEQREN
Sbjct: 131 VDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQREN 190

Query: 235 GTFPGPL 239
           GTFPGPL
Sbjct: 191 GTFPGPL 190

[Close]
BLAST of CcUC08G155300 vs. ExPASy TrEMBL
Match: A0A1S3BC78 (cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo OX=3656 GN=LOC103488079 PE=4 SV=1)

HSP 1 Score: 297.4 bits (760), Expect = 6.0e-77
Identity = 160/187 (85.56%), Postives = 164/187 (87.70%), Query Frame = 0 

Query: 55  SFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNSPAQ 114
           S   QY+LKE  EKVDIP PSEVKEVEN ENAAPAEVVVKNDEPPVEADADQ SDN PA+
Sbjct: 11  SLAEQYSLKEKEEKVDIPLPSEVKEVENAENAAPAEVVVKNDEPPVEADADQSSDNPPAE 70

Query: 115 ENNGDAPAAAAVEDVETSPAAENDSGAA--DESSGAGEEENSGDQESTDEQPEIKLETAP 174
           E       + AVED ET PAAENDSGAA  +ESSGAGEEENSGDQESTDEQPEIKLETAP
Sbjct: 71  E-------SPAVEDSETGPAAENDSGAAAEEESSGAGEEENSGDQESTDEQPEIKLETAP 130

Query: 175 VDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQREN 234
           VDFRFPTTNQTRHCFTRYIEYHRC QAKGEGAPEC KFAKYYRSLCPSEWVEKWNEQREN
Sbjct: 131 VDFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECEKFAKYYRSLCPSEWVEKWNEQREN 190

Query: 235 GTFPGPL 239
           GTFPGPL
Sbjct: 191 GTFPGPL 190

[Close]
BLAST of CcUC08G155300 vs. ExPASy TrEMBL
Match: A0A6J1KAZ5 (cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111492226 PE=4 SV=1)

HSP 1 Score: 283.9 bits (725), Expect = 6.9e-73
Identity = 151/186 (81.18%), Postives = 157/186 (84.41%), Query Frame = 0 

Query: 54  PSFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNSPA 113
           PS   QY+LKE  EKVDI KPSEVKEVEN ENAAPAE+VVKNDEPPVEADAD+GS+N PA
Sbjct: 10  PSLSEQYSLKEKEEKVDILKPSEVKEVENSENAAPAEIVVKNDEPPVEADADKGSNNPPA 69

Query: 114 QENNGDAPAAAAVEDVETSPAAENDSGAADESSGAGEEENSGDQESTDEQPEIKLETAPV 173
            ENNGDA AAAAVED ET+ A             AGEEE SGDQESTDEQPEIKLETAP 
Sbjct: 70  DENNGDASAAAAVEDSETNAA-------------AGEEEISGDQESTDEQPEIKLETAPA 129

Query: 174 DFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQRENG 233
           DFRFPTTNQTRHCFTRYIEYHRC QAKGEGAPEC+KFAKYYRSLCPSEWVEKWNEQRENG
Sbjct: 130 DFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPSEWVEKWNEQRENG 182

Query: 234 TFPGPL 239
            FPGPL
Sbjct: 190 CFPGPL 182

[Close]
BLAST of CcUC08G155300 vs. ExPASy TrEMBL
Match: A0A6J1HH76 (cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111462906 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 4.5e-72
Identity = 149/186 (80.11%), Postives = 156/186 (83.87%), Query Frame = 0 

Query: 54  PSFVLQYALKE-NEKVDIPKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNSPA 113
           PS   QY+LKE  EKVDIPKPSEV+EVEN ENA PAEVVVKNDEPPVEADADQGS+N PA
Sbjct: 10  PSLSEQYSLKEKEEKVDIPKPSEVEEVENSENAVPAEVVVKNDEPPVEADADQGSNNPPA 69

Query: 114 QENNGDAPAAAAVEDVETSPAAENDSGAADESSGAGEEENSGDQESTDEQPEIKLETAPV 173
             NNGDA AAAAVED ET+ A             AGEEE SGDQESTDE+PEIKLETAP 
Sbjct: 70  DVNNGDASAAAAVEDSETNAA-------------AGEEEISGDQESTDERPEIKLETAPA 129

Query: 174 DFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNEQRENG 233
           DFRFPTTNQTRHCFTRYIEYHRC QAKGEGAPEC+KFAKYYRSLCP+EWVEKWNEQRENG
Sbjct: 130 DFRFPTTNQTRHCFTRYIEYHRCTQAKGEGAPECDKFAKYYRSLCPNEWVEKWNEQRENG 182

Query: 234 TFPGPL 239
            FPGPL
Sbjct: 190 CFPGPL 182

[Close]
BLAST of CcUC08G155300 vs. TAIR 10
Match: AT1G22450.1 (cytochrome C oxidase 6B )

HSP 1 Score: 168.3 bits (425), Expect = 8.1e-42
Identity = 104/191 (54.45%), Postives = 129/191 (67.54%), Query Frame = 0 

Query: 52  ENPSFVLQYALKENEKVDI-PKPSEVKEVENPENAAPAEVVVKNDEPPVEADADQGSDNS 111
           + PS   QY L++  K D   KP EVKEV  PE    AE  VK ++   E+  ++    S
Sbjct: 8   QTPSLSEQYHLEKEVKQDTSAKPVEVKEVA-PEVTTQAE-EVKTEQAKEESPVEEAV--S 67

Query: 112 PAQENNGDAPAAAAVEDVETSPAAENDSGAADESSGAGEEEN--SGDQESTDEQP-EIKL 171
             +E +  AP +  V     +PAA  D+  A+E+  A EE N  +  +E  +E P EIKL
Sbjct: 68  VVEEKSESAPESTEV--ASEAPAAAEDN--AEETPAAAEENNDENASEEVAEETPDEIKL 127

Query: 172 ETAPVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEKWNE 231
           ETAP DFRFPTTNQTRHCFTRY+EYHRC+ AKG+ APEC+KFAK+YRSLCPSEWV++WNE
Sbjct: 128 ETAPADFRFPTTNQTRHCFTRYVEYHRCVAAKGDDAPECDKFAKFYRSLCPSEWVDRWNE 187

Query: 232 QRENGTFPGPL 239
           QRENGTFPGPL
Sbjct: 188 QRENGTFPGPL 190

[Close]
BLAST of CcUC08G155300 vs. TAIR 10
Match: AT4G28060.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 144.8 bits (364), Expect = 9.6e-35
Identity = 61/77 (79.22%), Postives = 68/77 (88.31%), Query Frame = 0 

Query: 162 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEW 221
           + EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRC  AKGE A EC +FAKYYR+LCP EW
Sbjct: 2   EDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEDANECERFAKYYRALCPGEW 61

Query: 222 VEKWNEQRENGTFPGPL 239
           V+KWNEQRE GTFPGPL
Sbjct: 62  VDKWNEQRETGTFPGPL 78

[Close]
BLAST of CcUC08G155300 vs. TAIR 10
Match: AT5G57815.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 142.5 bits (358), Expect = 4.8e-34
Identity = 59/77 (76.62%), Postives = 69/77 (89.61%), Query Frame = 0 

Query: 162 QPEIKLETAPVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEW 221
           + EI+L+TAP DFRFPTTNQTRHCFTRYIE+HRC  AKGE + +C +FAKYYR+LCP EW
Sbjct: 2   EDEIELKTAPADFRFPTTNQTRHCFTRYIEFHRCTTAKGEESNDCERFAKYYRALCPGEW 61

Query: 222 VEKWNEQRENGTFPGPL 239
           V+KWNEQRE+GTFPGPL
Sbjct: 62  VDKWNEQRESGTFPGPL 78

[Close]
BLAST of CcUC08G155300 vs. TAIR 10
Match: AT1G32710.1 (Cytochrome c oxidase, subunit Vib family protein )

HSP 1 Score: 75.1 bits (183), Expect = 9.3e-14
Identity = 31/63 (49.21%), Postives = 41/63 (65.08%), Query Frame = 0 

Query: 170 APVDFRFPTTNQTRHCFTRYIEYHRCIQAKGEGAPECNKFAKYYRSLCPSEWVEK-WNEQ 229
           A V+ RFP TN+TRHCF R+++YH+CI+  G  A +CN    Y RS+CP E V K W + 
Sbjct: 59  AAVEERFPVTNETRHCFNRFMQYHKCIEKNGRDANDCNNLRDYVRSICPEELVSKIWLKS 118

Query: 230 REN 232
             N
Sbjct: 119 GRN 121

The following BLAST results are available for this feature:
BLAST of CcUC08G155300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038886001.11.8e-8388.89cytochrome c oxidase subunit 6b-1-like [Benincasa hispida][more]
XP_004152624.16.0e-7986.24cytochrome c oxidase subunit 6b-1 [Cucumis sativus] >KGN62709.1 hypothetical pro... [more]
XP_008444857.11.2e-7685.56PREDICTED: cytochrome c oxidase subunit 6b-1-like [Cucumis melo] >KAA0065134.1 c... [more]
XP_023547029.15.8e-7481.72cytochrome c oxidase subunit 6b-1-like isoform X1 [Cucurbita pepo subsp. pepo][more]
KAG6598699.18.3e-7381.18Cytochrome c oxidase subunit 6b-1, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of CcUC08G155300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9S7L91.1e-4054.45Cytochrome c oxidase subunit 6b-1 OS=Arabidopsis thaliana OX=3702 GN=COX6B-1 PE=... [more]
Q9SUD31.4e-3379.22Cytochrome c oxidase subunit 6b-3 OS=Arabidopsis thaliana OX=3702 GN=COX6B-3 PE=... [more]
Q945L06.7e-3376.62Cytochrome c oxidase subunit 6b-2 OS=Arabidopsis thaliana OX=3702 GN=COX6B-2 PE=... [more]
O945814.1e-2254.76Cytochrome c oxidase subunit 12, mitochondrial OS=Schizosaccharomyces pombe (str... [more]
Q1K8U26.1e-1857.81Cytochrome c oxidase subunit 12, mitochondrial OS=Neurospora crassa (strain ATCC... [more]
BLAST of CcUC08G155300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0LNV62.9e-7986.24Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G369100 PE=4 SV=1[more]
A0A5A7VCW96.0e-7785.56Cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo var. makuwa OX=1194695 GN... [more]
A0A1S3BC786.0e-7785.56cytochrome c oxidase subunit 6b-1-like OS=Cucumis melo OX=3656 GN=LOC103488079 P... [more]
A0A6J1KAZ56.9e-7381.18cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita maxima OX=3661 GN... [more]
A0A6J1HH764.5e-7280.11cytochrome c oxidase subunit 6b-1-like isoform X1 OS=Cucurbita moschata OX=3662 ... [more]
BLAST of CcUC08G155300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G22450.18.1e-4254.45cytochrome C oxidase 6B [more]
AT4G28060.19.6e-3579.22Cytochrome c oxidase, subunit Vib family protein [more]
AT5G57815.14.8e-3476.62Cytochrome c oxidase, subunit Vib family protein [more]
AT1G32710.19.3e-1449.21Cytochrome c oxidase, subunit Vib family protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003213Cytochrome c oxidase, subunit VIbPFAMPF02297COX6Bcoord: 175..234
e-value: 4.3E-17
score: 62.1
IPR003213Cytochrome c oxidase, subunit VIbCDDcd00926Cyt_c_Oxidase_VIbcoord: 163..237
e-value: 9.96525E-44
score: 140.906
IPR036549Cytochrome c oxidase, subunit VIb superfamilyGENE3D1.10.10.140Cytochrome c oxidase, subunit VIbcoord: 160..240
e-value: 1.6E-33
score: 116.4
IPR036549Cytochrome c oxidase, subunit VIb superfamilySUPERFAMILY47694Cytochrome c oxidase subunit hcoord: 164..237
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 67..172
NoneNo IPR availablePANTHERPTHR46281:SF14CYTOCHROME C OXIDASE SUBUNIT 6B-1coord: 59..238
NoneNo IPR availablePANTHERPTHR46281CYTOCHROME C OXIDASE SUBUNIT 6Bcoord: 59..238
NoneNo IPR availablePROSITEPS51808CHCHcoord: 182..225
score: 14.287825

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G155300.1CcUC08G155300.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
cellular_component GO:0005739 mitochondrion
cellular_component GO:0045277 respiratory chain complex IV