CcUC08G155240 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G155240
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	40S ribosomal protein S6
Location	CicolChr08: 23643093 .. 23645302 (-)
RNA-Seq Expression	CcUC08G155240
Synteny	CcUC08G155240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GCGCAGGTTTTAAAACCCTAAAGCTTAAGGCGTCGTTAGGTCTCTTTGCTCGTCTCTTCTCTGCGGCCGCCTACTTCAATCTCATCGCTCGAAGATGAAGGTTCGTCCCTTACATTTCTCTTCCTTCTCACTTTTCTCCTGAGTTTCTCTTGAATACTGACTTCGAGGTATCGTGTTTACAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTGGAAATCGATGATGACCAGAAACTGTTAGCTTTCAAATGCCCCCTTTTCTTCAATCTGTTGTTTTCATTCTGAATCGCATTTTATGTGTATTTTCCATCTTTAGTCCATTGTTCATATCGTGAACTGTTTACATAAATCATGTTGTATTGGTTGTGTAGAAGGGTTATAGTTGCTAGTAGAACCCGAGTATTTTTTTTTTTTTTGCCCTATGTTTAGATCTTTGACTCCAATACTTAGGTTTTCGGTCACTAGGGATTTTCAAATGTATGATAACAAATAAAAAGGTTCCTCTTTCGAATGGTAAAGCAGTGTAGAAATCGTTTAGTCGCTGTATTTTCCGTGTTGATTGTTGTGTTAATGTTCAGCTTTGCTATGGGAGATATCAAATAGGGTTATGTATTGACATCTCTTGAAATCTAGCTGCGGCGAAGACGTCGGTTTGAGTTTTTACATTCGTTATTTGCTTTTTGCTAAGCAGTTCACTTGATAGTATTTTTATGAAATTTTAAATGAGAAAAAAAGATTTTTGCATTCGCTTTTTGTTGTACATATGTATTGTTATCATATTTATTTAGTTTTAATTTCATAATGGACTAAAATTAATCCTCGTCTTTGTTTAGCCGTGCTTTTTTTGACAAGAGGATCTCTCAGGAAGTTAGTGGAGATTCCCTCGGGGAGGTATGTTTGCTCATCTGCCATTAAATAGAAGCTTGGTTCCTAGGTTCTGTGACTGAATTTTACTGAGTGATTATCTTTCCACTTTTCAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGATGTGACAAGCAAGGATTCCCAATGAAACAGGGAGTTTTGACCCCAGGTCGTGTCCGTCTCTTGCTTCACAGAGGTTTGTGGAACTGTTTATGCTGGTGATTTGTCAACCCATTTATTAAGTTTTGTGGTTTATATTGAGTAATACAAGCATGTATTTTACTTTCTTGCCAGGCACCCCTTGTTTCCGTGGTTACGGAAGACGTAATGGAGAACGCAGAAGGAAGTCTGTTCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTTAATCTGGTGATTGTGAAGAAGGGAGACAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGGATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAACTTTTCAATCTCTCAAAGGAGGATGATGTTCGAAAGTATGTCAACACATACCGTAGATCATTCACCACAAAATCTGGTATGGTCTAAGTACAATTTTTTGTTGATGAAGTTGGATAATTTAATGGATATAATTTTTCTGGATGTACCTCCATTTGACATCATATTAGATTGTTGTTCAATATGGTTTCTGTTTGCACAATTAGATAGATTGTGCTTAGTAAAAAGCTCGATCAGTACCTGTCTCATTATGTCGATAAATAGAATTCTATCTATACAAATGTTTTTTTTTTCAGTTCCATGTGAATTAAGACTTTGATGAGCTGTTTGATTGACTGGCAGGCAAAAAGGTCAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCAAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAGAGTTTGGCCAAGAAGAGGTCTAGGCTCTCCGCTGCCTCAAAGCCATCCATTGCTGCTTAGTTCGTTCGAATTATTTATTTCTCAGCGTTTTGTTATCTTTATATTTTCCATCTTGTTTTGCTTTCAAAAGAATGTACTTTTTGCGGCTGCTTGCATATGACATCTAGAATGTTTTGGTATTTTTGGTTCCTAATTGACCAGTCATTTCTTGTCATTACTAAATATTTTATGATAGTTGAGAGGAATTTTGAAAGACCATGGTGAGCTGTCTGCACAATTAACTTGCTTTTCAATTTT

mRNA sequence

GCGCAGGTTTTAAAACCCTAAAGCTTAAGGCGTCGTTAGGTCTCTTTGCTCGTCTCTTCTCTGCGGCCGCCTACTTCAATCTCATCGCTCGAAGATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTGGAAATCGATGATGACCAGAAACTATCTTTGACTCCAATACTTAGGTTTTCGGTCACTAGGGATTTTCAAATCCGTGCTTTTTTTGACAAGAGGATCTCTCAGGAAGTTAGTGGAGATTCCCTCGGGGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGATGTGACAAGCAAGGATTCCCAATGAAACAGGGAGTTTTGACCCCAGGTCGTGTCCGTCTCTTGCTTCACAGAGGCACCCCTTGTTTCCGTGGTTACGGAAGACGTAATGGAGAACGCAGAAGGAAGTCTGTTCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTTAATCTGGTGATTGTGAAGAAGGGAGACAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGGATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAACTTTTCAATCTCTCAAAGGAGGATGATGTTCGAAAGTATGTCAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTCAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCAAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAGAGTTTGGCCAAGAAGAGGTCTAGGCTCTCCGCTGCCTCAAAGCCATCCATTGCTGCTTAGTTCGTTCGAATTATTTATTTCTCAGCGTTTTGTTATCTTTATATTTTCCATCTTGTTTTGCTTTCAAAAGAATGTACTTTTTGCGGCTGCTTGCATATGACATCTAGAATGTTTTGGTATTTTTGGTTCCTAATTGACCAGTCATTTCTTGTCATTACTAAATATTTTATGATAGTTGAGAGGAATTTTGAAAGACCATGGTGAGCTGTCTGCACAATTAACTTGCTTTTCAATTTT

Coding sequence (CDS)

ATGAAGTTTAATATCGCGAATCCGACTACTGGATGCCAGAAGAAGCTGGAAATCGATGATGACCAGAAACTATCTTTGACTCCAATACTTAGGTTTTCGGTCACTAGGGATTTTCAAATCCGTGCTTTTTTTGACAAGAGGATCTCTCAGGAAGTTAGTGGAGATTCCCTCGGGGAGGAATTCAAGGGCTATGTTTTCAAGATTATGGGAGGATGTGACAAGCAAGGATTCCCAATGAAACAGGGAGTTTTGACCCCAGGTCGTGTCCGTCTCTTGCTTCACAGAGGCACCCCTTGTTTCCGTGGTTACGGAAGACGTAATGGAGAACGCAGAAGGAAGTCTGTTCGTGGATGCATTGTCAGCCAAGACCTTTCTGTTCTTAATCTGGTGATTGTGAAGAAGGGAGACAATGATCTTCCTGGCTTGACAGACACTGAGAAACCTAGGATGAGGGGTCCCAAGAGGGCATCCAAGATTCGCAAACTTTTCAATCTCTCAAAGGAGGATGATGTTCGAAAGTATGTCAACACATACCGTAGATCATTCACCACAAAATCTGGCAAAAAGGTCAGCAAAGCTCCCAAGATTCAGAGGTTGGTTACCCCACTGACCTTGCAGAGGAAGCGAGGAAGAATTGCTGAGAAGAAGAAGAGAATTGCAAAGGCCAAGTCTGAGGCTGCTGAGTATCAGAAGCTCCTGGCCTCTAGGTTGAAGGAGCAAAGAGAACGTCGCAGTGAGAGTTTGGCCAAGAAGAGGTCTAGGCTCTCCGCTGCCTCAAAGCCATCCATTGCTGCTTAG

Protein sequence

MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEEFKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRLSAASKPSIAA

Homology

[Close]

BLAST of CcUC08G155240 vs. NCBI nr
Match: XP_022948606.1 (40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal protein S6 [Cucurbita maxima] >XP_023540275.1 40S ribosomal protein S6 [Cucurbita pepo subsp. pepo] >KAG6597045.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7028519.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 465.3 bits (1196), Expect = 3.5e-127
Identity = 249/265 (93.96%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEVSGDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVSGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPSIAA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSIAA 249

[Close]

BLAST of CcUC08G155240 vs. NCBI nr
Match: KAA0065138.1 (40S ribosomal protein S6-like [Cucumis melo var. makuwa])

HSP 1 Score: 464.9 bits (1195), Expect = 4.6e-127
Identity = 248/265 (93.58%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEVSGDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVSGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPS+AA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSVAA 249

[Close]

BLAST of CcUC08G155240 vs. NCBI nr
Match: XP_004133785.1 (40S ribosomal protein S6 [Cucumis sativus] >KGN56379.1 hypothetical protein Csa_010258 [Cucumis sativus])

HSP 1 Score: 464.2 bits (1193), Expect = 7.8e-127
Identity = 248/265 (93.58%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEV+GDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVAGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPSIAA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSIAA 249

[Close]

BLAST of CcUC08G155240 vs. NCBI nr
Match: XP_022962357.1 (40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal protein S6-like [Cucurbita pepo subsp. pepo] >KAG6598696.1 40S ribosomal protein S6, partial [Cucurbita argyrosperma subsp. sororia] >KAG7029638.1 40S ribosomal protein S6 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 464.2 bits (1193), Expect = 7.8e-127
Identity = 248/265 (93.58%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEVSGDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVSGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SFTTK+GKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPSIAA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSIAA 249

[Close]

BLAST of CcUC08G155240 vs. NCBI nr
Match: XP_038886740.1 (40S ribosomal protein S6 [Benincasa hispida])

HSP 1 Score: 463.0 bits (1190), Expect = 1.7e-126
Identity = 248/265 (93.58%), Postives = 248/265 (93.58%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEVSGDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVSGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SF TKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFITKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPSIAA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSIAA 249

[Close]

BLAST of CcUC08G155240 vs. ExPASy Swiss-Prot
Match: Q9M3V8 (40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1)

HSP 1 Score: 433.7 bits (1114), Expect = 1.5e-120
Identity = 229/259 (88.42%), Postives = 236/259 (91.12%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAF+DKRISQEVSGD+LGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFYDKRISQEVSGDALGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           S DLSVLNLVIVKKG+NDLPGLTD EKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SPDLSVLNLVIVKKGENDLPGLTDVEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           +FT K GK  SKAPKIQRLVTPLTLQRKR RIAEKKKR+AKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 TFTNKKGKTCSKAPKIQRLVTPLTLQRKRARIAEKKKRVAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAAS 260
           R+RRSESLAKKRSRLSAA+
Sbjct: 241 RDRRSESLAKKRSRLSAAA 243

[Close]

BLAST of CcUC08G155240 vs. ExPASy Swiss-Prot
Match: P51430 (40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3)

HSP 1 Score: 425.2 bits (1092), Expect = 5.3e-118
Identity = 225/265 (84.91%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFN+ANPTTGCQKKLEIDDDQKL                RAFFDKR+SQEVSGD+LGEE
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL----------------RAFFDKRLSQEVSGDALGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           S DLSVLNLVIVKKG +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR
Sbjct: 121 SPDLSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           +FT K GKKVSKAPKIQRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQ
Sbjct: 181 TFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           R+RRSESLAKKRSRLS+A    +AA
Sbjct: 241 RDRRSESLAKKRSRLSSAPAKPVAA 249

[Close]

BLAST of CcUC08G155240 vs. ExPASy Swiss-Prot
Match: O48549 (40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2)

HSP 1 Score: 424.1 bits (1089), Expect = 1.2e-117
Identity = 225/266 (84.59%), Postives = 238/266 (89.47%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFN+ANPTTGCQKKLEIDDDQKL                RAF+DKRISQEVSGD+LGEE
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL----------------RAFYDKRISQEVSGDALGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIV
Sbjct: 61  FKGYVFKIKGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           S DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR
Sbjct: 121 SPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
            FT K GK+VSKAPKIQRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQ
Sbjct: 181 KFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRL-SAASKPSIAA 266
           R+RRSESLAKKRSRL SAA+KPS+ A
Sbjct: 241 RDRRSESLAKKRSRLSSAAAKPSVTA 250

[Close]

BLAST of CcUC08G155240 vs. ExPASy Swiss-Prot
Match: P29345 (40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV=2)

HSP 1 Score: 318.5 bits (815), Expect = 6.9e-86
Identity = 178/204 (87.25%), Postives = 185/204 (90.69%), Query Frame = 0


Query: 62  KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVS 121
           KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLL+RGTPCFRGYGRRNGERRRKSVRGCIVS
Sbjct: 1   KGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLYRGTPCFRGYGRRNGERRRKSVRGCIVS 60

Query: 122 QDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRS 181
            DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGP+   +   L+   KEDDVRKYVNT    
Sbjct: 61  PDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPREPQRSEALY--FKEDDVRKYVNT-TAE 120

Query: 182 FTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQR 241
           FTTK   K SKAPKIQRLVTPLTLQRKR RIA+KKKRIAKAKSEAAEYQKLLASRLKEQR
Sbjct: 121 FTTK--WKGSKAPKIQRLVTPLTLQRKRARIADKKKRIAKAKSEAAEYQKLLASRLKEQR 180

Query: 242 ERRSESLAKKRSRLSAASKPSIAA 266
           E+RSESLAKKRSRLSAASKPSIAA
Sbjct: 181 EKRSESLAKKRSRLSAASKPSIAA 199

[Close]

BLAST of CcUC08G155240 vs. ExPASy Swiss-Prot
Match: P62753 (40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 4.7e-74
Identity = 159/257 (61.87%), Postives = 190/257 (73.93%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MK NI+ P TGCQK +E+DD++KL                R F++KR++ EV+ D+LGEE
Sbjct: 1   MKLNISFPATGCQKLIEVDDERKL----------------RTFYEKRMATEVAADALGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           +KGYV +I GG DKQGFPMKQGVLT GRVRLLL +G  C+R   RR GER+RKSVRGCIV
Sbjct: 61  WKGYVVRISGGNDKQGFPMKQGVLTHGRVRLLLSKGHSCYR--PRRTGERKRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
             +LSVLNLVIVKKG+ D+PGLTDT  PR  GPKRAS+IRKLFNLSKEDDVR+YV   R+
Sbjct: 121 DANLSVLNLVIVKKGEKDIPGLTDTTVPRRLGPKRASRIRKLFNLSKEDDVRQYV--VRK 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
               +  K  +KAPKIQRLVTP  LQ KR RIA KK+R  K K EAAEY KLLA R+KE 
Sbjct: 181 PLNKEGKKPRTKAPKIQRLVTPRVLQHKRRRIALKKQRTKKNKEEAAEYAKLLAKRMKEA 236

Query: 241 RERRSESLAKKRSRLSA 258
           +E+R E +AK+R RLS+
Sbjct: 241 KEKRQEQIAKRR-RLSS 236

[Close]

BLAST of CcUC08G155240 vs. ExPASy TrEMBL
Match: A0A6J1ICI3 (40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 249/265 (93.96%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEVSGDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVSGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPSIAA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSIAA 249

[Close]

BLAST of CcUC08G155240 vs. ExPASy TrEMBL
Match: A0A6J1G9P2 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1)

HSP 1 Score: 465.3 bits (1196), Expect = 1.7e-127
Identity = 249/265 (93.96%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEVSGDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVSGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPSIAA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSIAA 249

[Close]

BLAST of CcUC08G155240 vs. ExPASy TrEMBL
Match: A0A5A7VBY0 (40S ribosomal protein S6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G004730 PE=3 SV=1)

HSP 1 Score: 464.9 bits (1195), Expect = 2.2e-127
Identity = 248/265 (93.58%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEVSGDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVSGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPS+AA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSVAA 249

[Close]

BLAST of CcUC08G155240 vs. ExPASy TrEMBL
Match: A0A0A0L5R5 (40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_3G118140 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.8e-127
Identity = 248/265 (93.58%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEV+GDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVAGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPSIAA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSIAA 249

[Close]

BLAST of CcUC08G155240 vs. ExPASy TrEMBL
Match: A0A6J1HCI6 (40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111462827 PE=3 SV=1)

HSP 1 Score: 464.2 bits (1193), Expect = 3.8e-127
Identity = 248/265 (93.58%), Postives = 249/265 (93.96%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFNIANPTTGCQKKLEIDDDQKL                RAFFDKRISQEVSGDSLGEE
Sbjct: 1   MKFNIANPTTGCQKKLEIDDDQKL----------------RAFFDKRISQEVSGDSLGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR
Sbjct: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           SFTTK+GKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ
Sbjct: 181 SFTTKAGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           RERRSESLAKKRSRLSAASKPSIAA
Sbjct: 241 RERRSESLAKKRSRLSAASKPSIAA 249

[Close]

BLAST of CcUC08G155240 vs. TAIR 10
Match: AT5G10360.1 (Ribosomal protein S6e )

HSP 1 Score: 425.2 bits (1092), Expect = 3.7e-119
Identity = 225/265 (84.91%), Postives = 237/265 (89.43%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFN+ANPTTGCQKKLEIDDDQKL                RAFFDKR+SQEVSGD+LGEE
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL----------------RAFFDKRLSQEVSGDALGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           S DLSVLNLVIVKKG +DLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVRKYVNTYRR
Sbjct: 121 SPDLSVLNLVIVKKGVSDLPGLTDTEKPRMRGPKRASKIRKLFNLGKEDDVRKYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
           +FT K GKKVSKAPKIQRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQ
Sbjct: 181 TFTNKKGKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           R+RRSESLAKKRSRLS+A    +AA
Sbjct: 241 RDRRSESLAKKRSRLSSAPAKPVAA 249

[Close]

BLAST of CcUC08G155240 vs. TAIR 10
Match: AT4G31700.1 (ribosomal protein S6 )

HSP 1 Score: 424.1 bits (1089), Expect = 8.3e-119
Identity = 225/266 (84.59%), Postives = 238/266 (89.47%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFN+ANPTTGCQKKLEIDDDQKL                RAF+DKRISQEVSGD+LGEE
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL----------------RAFYDKRISQEVSGDALGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKI GGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIV
Sbjct: 61  FKGYVFKIKGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           S DLSVLNLVIVKKG+NDLPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR
Sbjct: 121 SPDLSVLNLVIVKKGENDLPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRR 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
            FT K GK+VSKAPKIQRLVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQ
Sbjct: 181 KFTNKKGKEVSKAPKIQRLVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQ 240

Query: 241 RERRSESLAKKRSRL-SAASKPSIAA 266
           R+RRSESLAKKRSRL SAA+KPS+ A
Sbjct: 241 RDRRSESLAKKRSRLSSAAAKPSVTA 250

[Close]

BLAST of CcUC08G155240 vs. TAIR 10
Match: AT5G10360.2 (Ribosomal protein S6e )

HSP 1 Score: 310.5 bits (794), Expect = 1.3e-84
Identity = 179/265 (67.55%), Postives = 189/265 (71.32%), Query Frame = 0


Query: 1   MKFNIANPTTGCQKKLEIDDDQKLSLTPILRFSVTRDFQIRAFFDKRISQEVSGDSLGEE 60
           MKFN+ANPTTGCQKKLEIDDDQKL                RAFFDKR+SQEVSGD+LGEE
Sbjct: 1   MKFNVANPTTGCQKKLEIDDDQKL----------------RAFFDKRLSQEVSGDALGEE 60

Query: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIV 120
           FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIV
Sbjct: 61  FKGYVFKIMGGCDKQGFPMKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIV 120

Query: 121 SQDLSVLNLVIVKKGDNDLPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRR 180
           S DLSVLNLVIVKK                                              
Sbjct: 121 SPDLSVLNLVIVKK---------------------------------------------- 180

Query: 181 SFTTKSGKKVSKAPKIQRLVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQ 240
                 GKKVSKAPKIQRLVTPLTLQRKR RIA+KKKRIAKA S+AA+YQKLLASRLKEQ
Sbjct: 181 ------GKKVSKAPKIQRLVTPLTLQRKRARIADKKKRIAKANSDAADYQKLLASRLKEQ 197

Query: 241 RERRSESLAKKRSRLSAASKPSIAA 266
           R+RRSESLAKKRSRLS+A    +AA
Sbjct: 241 RDRRSESLAKKRSRLSSAPAKPVAA 197

[Close]

BLAST of CcUC08G155240 vs. TAIR 10
Match: AT4G31700.2 (ribosomal protein S6 )

HSP 1 Score: 310.1 bits (793), Expect = 1.8e-84
Identity = 167/188 (88.83%), Postives = 177/188 (94.15%), Query Frame = 0


Query: 79  MKQGVLTPGRVRLLLHRGTPCFRGYGRRNGERRRKSVRGCIVSQDLSVLNLVIVKKGDND 138
           MKQGVLTPGRVRLLLHRGTPCFRG+GRR GERRRKSVRGCIVS DLSVLNLVIVKKG+ND
Sbjct: 1   MKQGVLTPGRVRLLLHRGTPCFRGHGRRTGERRRKSVRGCIVSPDLSVLNLVIVKKGEND 60

Query: 139 LPGLTDTEKPRMRGPKRASKIRKLFNLSKEDDVRKYVNTYRRSFTTKSGKKVSKAPKIQR 198
           LPGLTDTEKPRMRGPKRASKIRKLFNL KEDDVR YVNTYRR FT K GK+VSKAPKIQR
Sbjct: 61  LPGLTDTEKPRMRGPKRASKIRKLFNLKKEDDVRTYVNTYRRKFTNKKGKEVSKAPKIQR 120

Query: 199 LVTPLTLQRKRGRIAEKKKRIAKAKSEAAEYQKLLASRLKEQRERRSESLAKKRSRL-SA 258
           LVTPLTLQRKR RIA+KKK+IAKA S+AA+YQKLLASRLKEQR+RRSESLAKKRSRL SA
Sbjct: 121 LVTPLTLQRKRARIADKKKKIAKANSDAADYQKLLASRLKEQRDRRSESLAKKRSRLSSA 180

Query: 259 ASKPSIAA 266
           A+KPS+ A
Sbjct: 181 AAKPSVTA 188

The following BLAST results are available for this feature:

BLAST of CcUC08G155240 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022948606.1	3.5e-127	93.96	40S ribosomal protein S6 [Cucurbita moschata] >XP_022974831.1 40S ribosomal prot...	[more]
KAA0065138.1	4.6e-127	93.58	40S ribosomal protein S6-like [Cucumis melo var. makuwa]	[more]
XP_004133785.1	7.8e-127	93.58	40S ribosomal protein S6 [Cucumis sativus] >KGN56379.1 hypothetical protein Csa_...	[more]
XP_022962357.1	7.8e-127	93.58	40S ribosomal protein S6-like [Cucurbita moschata] >XP_023547004.1 40S ribosomal...	[more]
XP_038886740.1	1.7e-126	93.58	40S ribosomal protein S6 [Benincasa hispida]	[more]

BLAST of CcUC08G155240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M3V8	1.5e-120	88.42	40S ribosomal protein S6 OS=Asparagus officinalis OX=4686 GN=rps6 PE=2 SV=1	[more]
P51430	5.3e-118	84.91	40S ribosomal protein S6-2 OS=Arabidopsis thaliana OX=3702 GN=RPS6B PE=1 SV=3	[more]
O48549	1.2e-117	84.59	40S ribosomal protein S6-1 OS=Arabidopsis thaliana OX=3702 GN=RPS6A PE=1 SV=2	[more]
P29345	6.9e-86	87.25	40S ribosomal protein S6 (Fragment) OS=Nicotiana tabacum OX=4097 GN=RPS6 PE=2 SV...	[more]
P62753	4.7e-74	61.87	40S ribosomal protein S6 OS=Homo sapiens OX=9606 GN=RPS6 PE=1 SV=1	[more]

BLAST of CcUC08G155240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1ICI3	1.7e-127	93.96	40S ribosomal protein S6 OS=Cucurbita maxima OX=3661 GN=LOC111473607 PE=3 SV=1	[more]
A0A6J1G9P2	1.7e-127	93.96	40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111452228 PE=3 SV=1	[more]
A0A5A7VBY0	2.2e-127	93.58	40S ribosomal protein S6 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0L5R5	3.8e-127	93.58	40S ribosomal protein S6 OS=Cucumis sativus OX=3659 GN=Csa_3G118140 PE=3 SV=1	[more]
A0A6J1HCI6	3.8e-127	93.58	40S ribosomal protein S6 OS=Cucurbita moschata OX=3662 GN=LOC111462827 PE=3 SV=1	[more]

BLAST of CcUC08G155240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G10360.1	3.7e-119	84.91	Ribosomal protein S6e	[more]
AT4G31700.1	8.3e-119	84.59	ribosomal protein S6	[more]
AT5G10360.2	1.3e-84	67.55	Ribosomal protein S6e	[more]
AT4G31700.2	1.8e-84	88.83	ribosomal protein S6	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 205..232
None	No IPR available	GENE3D	1.20.5.2650		coord: 149..250 e-value: 6.6E-39 score: 134.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..253
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 238..265
None	No IPR available	PANTHER	PTHR11502:SF22	40S RIBOSOMAL PROTEIN S6-LIKE	coord: 1..265
IPR001377	Ribosomal protein S6e	SMART	SM01405	Ribosomal_S6e_2	coord: 1..144 e-value: 2.6E-73 score: 259.5
IPR001377	Ribosomal protein S6e	PFAM	PF01092	Ribosomal_S6e	coord: 37..144 e-value: 2.7E-46 score: 156.6
IPR001377	Ribosomal protein S6e	PANTHER	PTHR11502	40S RIBOSOMAL PROTEIN S6	coord: 1..265
IPR014401	Ribosomal protein S6, eukaryotic	PIRSF	PIRSF002129	RPS6e	coord: 1..265 e-value: 1.2E-111 score: 369.8
IPR018282	Ribosomal protein S6e, conserved site	PROSITE	PS00578	RIBOSOMAL_S6E	coord: 68..79

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G155240.1	CcUC08G155240.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005840	ribosome
molecular_function	GO:0003735	structural constituent of ribosome