CcUC08G154060 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G154060
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	CBFD_NFYB_HMF domain-containing protein
Location	CicolChr08: 22471731 .. 22472369 (+)
RNA-Seq Expression	CcUC08G154060
Synteny	CcUC08G154060

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCCAAAGAACCCCCAACACAATTGAGAAAGACCCACTCATATTGCGTGAGCCAAAACGCACTCCAGGGTTATTCTCGTCATATAAAATTTCCAGCATCGTCTTCCCGCCATTACAAATCCCCAGATTTTCATCGATTCAATCAAATCATCTGGTCCTAGAACGAAAGCCATCTTCCGGCATCGGATTATTGCAAGTTCATTCAGATTCTGGATATGGAGGAAGAGGAAACCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGGCGAGTGAAGAAGATAATGAAGCTCGACAAGGATATTGGCAAAGTGAATTCAGAAGCCCTGTTTCTAGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAAACCGTGAAGCTTGAACACATCCGAATCGCCGCCAAAAGGCATCGATCGATTAGTGATTTTCTACTCGATTCGCTTCCTCTTCCTTCTCAGCGGTCGGATGCGCCGGCAAAGGACGAGAATCGCACTCGCACTGTCGTTGATAAAGTGGCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTCGCCGGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCATAG

mRNA sequence

ATGCCCAAAGAACCCCCAACACAATTGAGAAAGACCCACTCATATTGCAACGAAAGCCATCTTCCGGCATCGGATTATTGCAAGTTCATTCAGATTCTGGATATGGAGGAAGAGGAAACCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGGCGAGTGAAGAAGATAATGAAGCTCGACAAGGATATTGGCAAAGTGAATTCAGAAGCCCTGTTTCTAGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAAACCGTGAAGCTTGAACACATCCGAATCGCCGCCAAAAGGCATCGATCGATTAGTGATTTTCTACTCGATTCGCTTCCTCTTCCTTCTCAGCGGTCGGATGCGCCGGCAAAGGACGAGAATCGCACTCGCACTGTCGTTGATAAAGTGGCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTCGCCGGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCATAG

Coding sequence (CDS)

ATGCCCAAAGAACCCCCAACACAATTGAGAAAGACCCACTCATATTGCAACGAAAGCCATCTTCCGGCATCGGATTATTGCAAGTTCATTCAGATTCTGGATATGGAGGAAGAGGAAACCGGAGAGGCTATCCGGCCGGAATTTCCGACGGGGCGAGTGAAGAAGATAATGAAGCTCGACAAGGATATTGGCAAAGTGAATTCAGAAGCCCTGTTTCTAGTCTCATGCGCCACCGAGCTCTTCCTCAAGCTTCTAGCTGAAAAATCTGCAGAAGTCGCCGCTGAGAAGAAACGGAAAACCGTGAAGCTTGAACACATCCGAATCGCCGCCAAAAGGCATCGATCGATTAGTGATTTTCTACTCGATTCGCTTCCTCTTCCTTCTCAGCGGTCGGATGCGCCGGCAAAGGACGAGAATCGCACTCGCACTGTCGTTGATAAAGTGGCTCCTGAAGGAACCCGTCGAATCGATGATTTCTTTCGCCGGCCAGCAAAGACAACGTCGGCGGAGACCAACGAGTCATAG

Protein sequence

MPKEPPTQLRKTHSYCNESHLPASDYCKFIQILDMEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTRRIDDFFRRPAKTTSAETNES

Homology

[Close]

BLAST of CcUC08G154060 vs. NCBI nr
Match: KAA0064731.1 (dr1-associated corepressor [Cucumis melo var. makuwa])

HSP 1 Score: 250.0 bits (637), Expect = 1.5e-62
Identity = 131/140 (93.57%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           MEEEE+GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIR+A KRHRSISDFLLDSLPLPSQ SDAPAKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 155 RIDDFFRRPAKTTSAETNES 175
           RIDDFFRRP KTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of CcUC08G154060 vs. NCBI nr
Match: XP_038884228.1 (NCT transcriptional regulatory complex subunit A [Benincasa hispida])

HSP 1 Score: 248.1 bits (632), Expect = 5.8e-62
Identity = 131/140 (93.57%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           M EEE+G+AIRPEFPTGRVKKIMKLDKDI KVNSEALFLVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MAEEESGDAIRPEFPTGRVKKIMKLDKDIEKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIRIA KRHRSISDFLLDSLPLP Q SDAPAKDENRTRTVVDKV PEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHRSISDFLLDSLPLPPQPSDAPAKDENRTRTVVDKVVPEGTR 120

Query: 155 RIDDFFRRPAKTTSAETNES 175
           RIDDFFRRPAKTTSAE NES
Sbjct: 121 RIDDFFRRPAKTTSAENNES 140

[Close]

BLAST of CcUC08G154060 vs. NCBI nr
Match: XP_008445504.1 (PREDICTED: dr1-associated corepressor [Cucumis melo])

HSP 1 Score: 247.7 bits (631), Expect = 7.5e-62
Identity = 131/140 (93.57%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           MEEEE+GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIR+A KRHRSISDFLLDSLPLPSQ SDA AKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 155 RIDDFFRRPAKTTSAETNES 175
           RIDDFFRRP KTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of CcUC08G154060 vs. NCBI nr
Match: XP_022997291.1 (DNA polymerase epsilon subunit C [Cucurbita maxima])

HSP 1 Score: 244.2 bits (622), Expect = 8.3e-61
Identity = 128/140 (91.43%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKSAEVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIRIA KRH+SISDFLLDSLPLPSQ SDAPAKDENRTR VVDKVAPEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 155 RIDDFFRRPAKTTSAETNES 175
           RIDDFFRRP KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of CcUC08G154060 vs. NCBI nr
Match: XP_023547243.1 (putative transcription factor C16C4.22 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 241.9 bits (616), Expect = 4.1e-60
Identity = 126/140 (90.00%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           M E+E+GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKS+EVAA
Sbjct: 1   MAEKESGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIRIA KRH+SISDFLLDSLPLPSQ SDAPAKDENRTR VVDKVAPEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 155 RIDDFFRRPAKTTSAETNES 175
           RIDDFFRRPAKT SAE NE+
Sbjct: 121 RIDDFFRRPAKTASAEINET 140

[Close]

BLAST of CcUC08G154060 vs. ExPASy Swiss-Prot
Match: B0XTT5 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=nctA PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-06
Identity = 33/102 (32.35%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 44  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKL 103
           ++ +FP  R+K+IM+ D+D+GKV       VS A ELF+  L  K+A+ A ++  K V  
Sbjct: 130 VKTKFPVARIKRIMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAKEARDRNSKRVTA 189

Query: 104 EHIRIAAKRHRSISDFLLDSL------PLPSQRSDAPAKDEN 140
            H++ A  +   + DFL D +      P   ++ D    D+N
Sbjct: 190 THLKQAVVKD-EVLDFLADIIAKVPDQPAGGRKHDDDGSDQN 230

[Close]

BLAST of CcUC08G154060 vs. ExPASy Swiss-Prot
Match: Q4X095 (NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=nctA PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 3.6e-06
Identity = 33/102 (32.35%), Postives = 54/102 (52.94%), Query Frame = 0


Query: 44  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKL 103
           ++ +FP  R+K+IM+ D+D+GKV       VS A ELF+  L  K+A+ A ++  K V  
Sbjct: 130 VKTKFPVARIKRIMQADEDVGKVAQVTPIAVSKALELFMISLVTKAAKEARDRNSKRVTA 189

Query: 104 EHIRIAAKRHRSISDFLLDSL------PLPSQRSDAPAKDEN 140
            H++ A  +   + DFL D +      P   ++ D    D+N
Sbjct: 190 THLKQAVVKD-EVLDFLADIIAKVPDQPAGGRKHDDDGSDQN 230

[Close]

BLAST of CcUC08G154060 vs. ExPASy Swiss-Prot
Match: Q9W256 (DNA polymerase epsilon subunit 4 OS=Drosophila melanogaster OX=7227 GN=Mes4 PE=2 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 7.9e-06
Identity = 26/68 (38.24%), Postives = 43/68 (63.24%), Query Frame = 0


Query: 42  EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTV 101
           EA   + P  R++ IMKLD D+   N+EA+F+V+ A ELF+  L+ +S    A+ K+KT+
Sbjct: 72  EAKMTQLPLARIRNIMKLDPDLHMANNEAVFIVAKAVELFIASLSRESYTYTAQSKKKTI 131

Query: 102 KLEHIRIA 110
           +   + +A
Sbjct: 132 QKRDVDMA 139

[Close]

BLAST of CcUC08G154060 vs. ExPASy Swiss-Prot
Match: Q54DA1 (Dr1-associated corepressor homolog OS=Dictyostelium discoideum OX=44689 GN=drap1 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.4e-05
Identity = 27/78 (34.62%), Postives = 46/78 (58.97%), Query Frame = 0


Query: 45  RPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLE 104
           + +FP  R+KKIM+ D+++GK+ S    L+S   ELF+  L  K+ ++   KK K + + 
Sbjct: 6   KTKFPMARIKKIMQKDEEVGKIASATPILISQCLELFMADLVMKTCKITQAKKGKVISVN 65

Query: 105 HIRIAAKRHRSISDFLLD 123
           H++   K+  S  DFL +
Sbjct: 66  HLKECIKQ-ESTFDFLTE 82

[Close]

BLAST of CcUC08G154060 vs. ExPASy Swiss-Prot
Match: Q2YDP3 (Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1)

HSP 1 Score: 50.8 bits (120), Expect = 1.8e-05
Identity = 30/86 (34.88%), Postives = 50/86 (58.14%), Query Frame = 0


Query: 48  FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 107
           FP  R+KKIM+ D++IGKV +    ++S A ELFL+ L +K+ +V   +  KT+   H++
Sbjct: 12  FPPARIKKIMQTDEEIGKVAAAVPVIISRALELFLESLLKKACQVTQSRNAKTMTTSHLK 71

Query: 108 IAAKRHRSISDFLLDSL-PLPSQRSD 133
              +  +   DFL D +  +P  + D
Sbjct: 72  QCIELEQQF-DFLKDLVASVPDMQGD 96

[Close]

BLAST of CcUC08G154060 vs. ExPASy TrEMBL
Match: A0A5A7VG98 (Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold82G00350 PE=4 SV=1)

HSP 1 Score: 250.0 bits (637), Expect = 7.3e-63
Identity = 131/140 (93.57%), Postives = 134/140 (95.71%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           MEEEE+GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALF+VSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFIVSCATELFLKLLAEKSAEVAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIR+A KRHRSISDFLLDSLPLPSQ SDAPAKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRIRAVVDKVAPAGTR 120

Query: 155 RIDDFFRRPAKTTSAETNES 175
           RIDDFFRRP KTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of CcUC08G154060 vs. ExPASy TrEMBL
Match: A0A1S3BDL4 (dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1)

HSP 1 Score: 247.7 bits (631), Expect = 3.6e-62
Identity = 131/140 (93.57%), Postives = 133/140 (95.00%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           MEEEE+GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA
Sbjct: 1   MEEEESGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIR+A KRHRSISDFLLDSLPLPSQ SDA AKDENR R VVDKVAP GTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDASAKDENRIRAVVDKVAPAGTR 120

Query: 155 RIDDFFRRPAKTTSAETNES 175
           RIDDFFRRP KTTSAETNES
Sbjct: 121 RIDDFFRRPTKTTSAETNES 140

[Close]

BLAST of CcUC08G154060 vs. ExPASy TrEMBL
Match: A0A6J1K737 (DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 4.0e-61
Identity = 128/140 (91.43%), Postives = 132/140 (94.29%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKSAEVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSAEVAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIRIA KRH+SISDFLLDSLPLPSQ SDAPAKDENRTR VVDKVAPEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSISDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 155 RIDDFFRRPAKTTSAETNES 175
           RIDDFFRRP KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of CcUC08G154060 vs. ExPASy TrEMBL
Match: A0A6J1HCT3 (DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 PE=4 SV=1)

HSP 1 Score: 241.5 bits (615), Expect = 2.6e-60
Identity = 126/140 (90.00%), Postives = 131/140 (93.57%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           M EEE GEAIRPEFP GR+KKIMKLDKDIGKVNSEALFLVSCATELFL+LLAEKS+EVAA
Sbjct: 1   MAEEEPGEAIRPEFPMGRIKKIMKLDKDIGKVNSEALFLVSCATELFLELLAEKSSEVAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIRIA KRH+SI DFLLDSLPLPSQ SDAPAKDENRTR VVDKVAPEGTR
Sbjct: 61  EKKRKTVKLEHIRIAVKRHQSIGDFLLDSLPLPSQPSDAPAKDENRTRVVVDKVAPEGTR 120

Query: 155 RIDDFFRRPAKTTSAETNES 175
           RIDDFFRRP KT SAETNE+
Sbjct: 121 RIDDFFRRPEKTASAETNET 140

[Close]

BLAST of CcUC08G154060 vs. ExPASy TrEMBL
Match: A0A0A0KGV1 (CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G365140 PE=4 SV=1)

HSP 1 Score: 241.1 bits (614), Expect = 3.4e-60
Identity = 128/137 (93.43%), Postives = 129/137 (94.16%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           MEEEE GEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAE AA
Sbjct: 1   MEEEEFGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAESAA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEGTR 154
           EKKRKTVKLEHIR+A KRHRSISDFLLDSLPLPSQ SDAPAKDENRTR VVDKVAPEGTR
Sbjct: 61  EKKRKTVKLEHIRMAVKRHRSISDFLLDSLPLPSQPSDAPAKDENRTRAVVDKVAPEGTR 120

Query: 155 RIDDFFRRPAKTTSAET 172
           RIDDFFRR  KT SAET
Sbjct: 121 RIDDFFRRSTKTKSAET 137

[Close]

BLAST of CcUC08G154060 vs. TAIR 10
Match: AT5G43250.1 (nuclear factor Y, subunit C13 )

HSP 1 Score: 149.4 bits (376), Expect = 2.6e-36
Identity = 91/139 (65.47%), Postives = 104/139 (74.82%), Query Frame = 0


Query: 35  MEEEETGEAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 94
           MEEEE   +IRPEFP GRVKKIMKLDKDI K+NSEAL +++ +TELFL  LAEKSA V A
Sbjct: 1   MEEEE--GSIRPEFPIGRVKKIMKLDKDINKINSEALHVITYSTELFLHFLAEKSAVVTA 60

Query: 95  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDK---VAPE 154
           EKKRKTV L+H+RIA KRH+  SDFLLDSLPLP+Q    P K    T++V DK     P 
Sbjct: 61  EKKRKTVNLDHLRIAVKRHQPTSDFLLDSLPLPAQ----PVK---HTKSVSDKKIPAPPI 120

Query: 155 GTRRIDDFFRR-PAKTTSA 170
           GTRRIDDFF +  AKT SA
Sbjct: 121 GTRRIDDFFSKGKAKTDSA 130

[Close]

BLAST of CcUC08G154060 vs. TAIR 10
Match: AT3G12480.1 (nuclear factor Y, subunit C11 )

HSP 1 Score: 53.9 bits (128), Expect = 1.5e-07
Identity = 29/73 (39.73%), Postives = 47/73 (64.38%), Query Frame = 0


Query: 48  FPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHIR 107
           FP  R+KKIM+ D+D+GK+      LVS + ELFL+ L +++ E+  E+  KTV   H++
Sbjct: 9   FPAARIKKIMQADEDVGKIALAVPVLVSKSLELFLQDLCDRTYEITLERGAKTVSSLHLK 68

Query: 108 IAAKRHRSISDFL 121
              +R+ ++ DFL
Sbjct: 69  HCVERY-NVFDFL 80

[Close]

BLAST of CcUC08G154060 vs. TAIR 10
Match: AT5G19490.1 (Histone superfamily protein )

HSP 1 Score: 51.6 bits (122), Expect = 7.4e-07
Identity = 34/105 (32.38%), Postives = 57/105 (54.29%), Query Frame = 0


Query: 44  IRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKL 103
           ++  FP  R+KKIM+ D+++GK+      LVS A ELFL+ L   + +V   +  KTV  
Sbjct: 5   LQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSKALELFLQDLCNHTYDVTLSRGAKTVNA 64

Query: 104 EHIRIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRT--RTVVD 147
            H++   +   ++ DFL D++        +  +D++ T  R VVD
Sbjct: 65  FHLKQCVQA-TNVFDFLRDTVAKVPDLGGSDTEDQSATKRRKVVD 108

[Close]

BLAST of CcUC08G154060 vs. TAIR 10
Match: AT1G07980.1 (nuclear factor Y, subunit C10 )

HSP 1 Score: 50.8 bits (120), Expect = 1.3e-06
Identity = 27/91 (29.67%), Postives = 56/91 (61.54%), Query Frame = 0


Query: 36  EEEETG-EAIRPEFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAA 95
           EE++ G E  + +FP  R+++IM+ D    ++  +A+FLV+ ATE+F++  +E++ + + 
Sbjct: 97  EEDDGGAEDAKIKFPMNRIRRIMRSDNSAPQIMQDAVFLVNKATEMFIERFSEEAYDSSV 156

Query: 96  EKKRKTVKLEHIRIAAKRHRSISDFLLDSLP 126
           + K+K +  +H+       +   +FL DS+P
Sbjct: 157 KDKKKFIHYKHLSSVVSNDQRY-EFLADSVP 186

[Close]

BLAST of CcUC08G154060 vs. TAIR 10
Match: AT5G27910.1 (nuclear factor Y, subunit C8 )

HSP 1 Score: 47.8 bits (112), Expect = 1.1e-05
Identity = 39/106 (36.79%), Postives = 53/106 (50.00%), Query Frame = 0


Query: 47  EFPTGRVKKIMKLDKDIGKVNSEALFLVSCATELFLKLLAEKSAEVAAEKKRKTVKLEHI 106
           + P  R+KKIMK D D+  + SEA  L+S A E+F+  L  +S   A E KR T++  ++
Sbjct: 36  DLPITRIKKIMKYDPDVTMIASEAPILLSKACEMFIMDLTMRSWLHAQESKRVTLQKSNV 95

Query: 107 RIAAKRHRSISDFLLDSLPLPSQRSDAPAKDENRTRTVVDKVAPEG 153
             AA     I DFLLD      + S A A D      + D   P G
Sbjct: 96  D-AAVAQTVIFDFLLDDDIEVKRESVAAAADPVAMPPIDDGELPPG 140

The following BLAST results are available for this feature:

BLAST of CcUC08G154060 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0064731.1	1.5e-62	93.57	dr1-associated corepressor [Cucumis melo var. makuwa]	[more]
XP_038884228.1	5.8e-62	93.57	NCT transcriptional regulatory complex subunit A [Benincasa hispida]	[more]
XP_008445504.1	7.5e-62	93.57	PREDICTED: dr1-associated corepressor [Cucumis melo]	[more]
XP_022997291.1	8.3e-61	91.43	DNA polymerase epsilon subunit C [Cucurbita maxima]	[more]
XP_023547243.1	4.1e-60	90.00	putative transcription factor C16C4.22 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CcUC08G154060 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
B0XTT5	3.6e-06	32.35	NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain...	[more]
Q4X095	3.6e-06	32.35	NCT transcriptional regulatory complex subunit A OS=Neosartorya fumigata (strain...	[more]
Q9W256	7.9e-06	38.24	DNA polymerase epsilon subunit 4 OS=Drosophila melanogaster OX=7227 GN=Mes4 PE=2...	[more]
Q54DA1	1.4e-05	34.62	Dr1-associated corepressor homolog OS=Dictyostelium discoideum OX=44689 GN=drap1...	[more]
Q2YDP3	1.8e-05	34.88	Dr1-associated corepressor OS=Bos taurus OX=9913 GN=DRAP1 PE=2 SV=1	[more]

BLAST of CcUC08G154060 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7VG98	7.3e-63	93.57	Dr1-associated corepressor OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaff...	[more]
A0A1S3BDL4	3.6e-62	93.57	dr1-associated corepressor OS=Cucumis melo OX=3656 GN=LOC103488501 PE=4 SV=1	[more]
A0A6J1K737	4.0e-61	91.43	DNA polymerase epsilon subunit C OS=Cucurbita maxima OX=3661 GN=LOC111492238 PE=...	[more]
A0A6J1HCT3	2.6e-60	90.00	DNA polymerase epsilon subunit C OS=Cucurbita moschata OX=3662 GN=LOC111462901 P...	[more]
A0A0A0KGV1	3.4e-60	93.43	CBFD_NFYB_HMF domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G3651...	[more]

BLAST of CcUC08G154060 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G43250.1	2.6e-36	65.47	nuclear factor Y, subunit C13	[more]
AT3G12480.1	1.5e-07	39.73	nuclear factor Y, subunit C11	[more]
AT5G19490.1	7.4e-07	32.38	Histone superfamily protein	[more]
AT1G07980.1	1.3e-06	29.67	nuclear factor Y, subunit C10	[more]
AT5G27910.1	1.1e-05	36.79	nuclear factor Y, subunit C8	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR009072	Histone-fold	GENE3D	1.10.20.10	Histone, subunit A	coord: 11..125 e-value: 8.0E-23 score: 82.9
IPR009072	Histone-fold	SUPERFAMILY	47113	Histone-fold	coord: 46..125
IPR003958	Transcription factor CBF/NF-Y/archaeal histone domain	PFAM	PF00808	CBFD_NFYB_HMF	coord: 47..109 e-value: 2.2E-19 score: 69.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 126..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 133..148
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 155..174
None	No IPR available	PANTHER	PTHR10252:SF95	NUCLEAR FACTOR Y, SUBUNIT C13	coord: 28..163
None	No IPR available	PANTHER	PTHR10252	HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED	coord: 28..163

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G154060.1	CcUC08G154060.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046982	protein heterodimerization activity