CcUC08G152920 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G152920
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	U4/U6 small nuclear ribonucleoprotein PRP4-like protein
Location	CicolChr08: 21288155 .. 21294362 (-)
RNA-Seq Expression	CcUC08G152920
Synteny	CcUC08G152920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTAGAATAAAATAATTTAGAAAGATAGAGAAATGGAAACCTAAGTAATACTCACTCACTCCTTTGATCTTCCCTCACTCTCACGTGGAGTCCATCTTTTTCCTTGACGCCGGTTCCCTTCCATTCAGCAGCTCCGGGCCGCCGCCGCCGCCGTAGTCTCTCTTCTCGCTCGTGCCGCCTCCTAGCAGTTTGTTACTGTCCGTCTGGCATCCCCGTCATTCCAAATTGGACTGAAACTTCACCTGTTGACGAGGGCAAGTCTGTACCATCCCCGGCGGCTGGAAATGGTGTTTTGACGGTACACATCCTTTGCTAGATCCGAATCTCCCTTCACTTCTCATTCTATTTCTCTCTCTCTGTTAACTTTAGTTATTTCATTCATCTCTCTCTCTTGATTGGCTTTTCTGGTGTCGTATTAGTGATGATCCTTTTTCCCGACTCGTGTTACTACTGCGAACATGATGGGAGAAATTTGTTTTTATGAAACTATAAGAGTCTAGAAAGTGTATATTGCAGTGTGCTGTTCAGAGGGATTTTATTTCTATTTTCGTGAATTATATCTATCTTCTAATGCCAGTTTGATAATCTGTTATAGGGCCGGTGCGGCCTCAGAATAGTACTTACCGTTTCTTCGTGAATGGTTTGGTATTTTTCCCCTGTACTTTTGAAAGTTTCTAGTTAACAATGAAATTCACGTTTTACTATTTATGCTCGATTTTGTTTCTCATTTGTGTTATCTTAACTAATTTTTAGGAGCTTGATTGTAGAGGAGGAATGAAAAGAGGAACATAATATCTAGGACAAGCTTGTTTTGTTTAGAAGTTTCATTTCTGAGAGAGCTATCATGGAAGTTGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGATCTTGGTAATCCAGCAGAACTAATTCAACCAGCAGCTACATCAGTTATTCCATCTTCGATTGTCCCTGCCATTGCTCCTATCCCCACTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGGCCCCATGTAACACAAAATGGTGAGATAAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGGGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGTCGTCTTGGTGAACCCATAACCCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGTTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACCGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCAGCTTCACGTCTTGAGCATGCAAAGAGGAAAAGGGATGACCCAGATGAAGATGTGGAAGCCGAAATGGATTGGGCTCTGAGGCAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGGTAAACCTTCTCATTTTTGCAGTTCAAGATTTTTAGTTTCTATACCAGTTTCTCCTTTCCAATATCACCCCCATTTCACCTCCTGATAGAAGGGGAGGAAAAAAAAAGGGAATAAATCGTTGTGGCTATAGATTAGCTATCATCTTCCCACTCACCTACAATTCCTCAGCTGAACAAGAGACCAAAGATAATGTACAAGTGAAGGTTTTTCCATATTCGATTCCAAGATTTGATAAGCTTTATAGGCTTTGTATTTAGCTTTCATTTTACTTTTCTGCATACTTCTACTGGCTTTGCATGTGATGGTTTGCATTTTTCTTCTTGTTTTATTTCTGTAGTTCATTAAGTGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAATGAGTATTTAGCAACTGCGTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTAAAACATTCGAGGGCCATTTGGACCGCCTTGCACGAATTGCCTTCCACCCGTCAGGCAAGTACTTGGGCACGACTAGCTTTGACAAGACGTGGAGATTATGGGACGTTGAAACTGGTGTAGAGTTACTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCTTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGAACGGGTAGAAGTGTTCTTGCCTTAGAAGGCCATGTCAAGCCAGTAAATCTCTCTCCTTACTTTCAATGGGACTGTAGAACATTTGTTTTCAATAAATTTGACTCATTTGCTCCTTACTGATACCTTGCTTTTCAATGGATTCCATATGTCTATGATGTTATAACCAGGTCCTTGGAGTTAGTTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGCGAAGATAACACTTGTAGGATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACCTAGTTTCACAGGTGAAATATGAGCCCCAAGAGGGGTACTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGGTAATCTTGGACACTGTCAGGATGATATAATATTGCTCAAATCTTGATATTTTCATTTGATTGTTGCTTCATCTCACTTGCAGTTTAAGGTTTCATTTACTATAATTATTTTTGGCAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGGTCAGTTATTTATCAACTCCTAGGTCATTACTATTATTGTTGTTTTTACACTGATTACCACCTAGGTTATTACTGTACACCATTTTGCATCATTTTATGGCCTTCCACACATTTCAGTTACGTACATTTTTTTTCTATGTTTTTCATGGTATAATGAACTAATGTGCTTGAAATAATTTGACTGGAGGACGATAATTTGTTGGGTTTGATGACGTATGCCTTGCCTACAGTCTACAGGATTTCCAGATTCAAAACCCCAATCCTTTGCTCTTGGATGGTTATTTCATATCACTGAAATCTTCCCTTCAAAACCTCCTCATTTAGACCCCTATGAGAATGTCCCCTCCCTTCCGGGAATGGAGAAAAAACCTGGCCACAAAATTTCTGAAAATCTGCACTATGAGTTCGAAAAATCCAGAAAACTTTAGTCATTACATTTACTTTGCTTTTGAAGTTGTCCTTACCTCTTCTTGCTGGGGTAGGGGGAACTTCCTTGAGGGGTTTCAGGTGGGAAGGTATGGGAAGGGATATGATGGTTTTACTGTTGGTTTGTTGATGGCACGGCCTTCTTTTATTTTTGTGGGGAAGGGTCTTTTGTTAATCTAAGCTATATCTTGTCTCTTTTTGAGTCTATATGGTCTGAAGATAAGCAGAAACAAGTGTCAAGGAGGAATGCAAGTCTTTTCAAGTATGTCCAATTCTATTGTTTATTTTTGTGATCTTGTACAATTCACAGCCTCTAATTGGAGTAACCAACACAAGTTCTTTTGTCAATACTCCACTTTTTTTCCATCAACTTAGATTAGAAGGTTTTTATTTTTATTTTTTATGTAGAATCTGTCTTGTATATTTTTTTAGTAAGGAACCCTGTTTTCATGGAGAAAAATGAAAGAATATATACGGGCATGAAAAGAAAGCTCAACAGAGAAATGGAGTTGGACTCTAACTACAAAAATAGACTTCAATTCAAAAGACAAGACCTAGGTAGTAATTACAAAAAGCTCTAGTGATTGACACCCATAAGGAGGTATTAAACCTAGCTACCTCCCAAACTTCCTCACCTGATCTTTTACCTCTAAAAATTCTATTTTTCCTTTCAAGCCAAATTCCTAACAAAACTTCAAAGCCAGCTAGTCTACCATTAAAGTTTACTCTTCTCCGTGTGTAAGAACCCAGAAGCACCTCCTTTAGTTGAGCCCTGCCAACTCCATTCCAAGCCGAAGAAAGGCTAAACAATCTCAGCTAACAACTCCAAGGGTGGTGAGCAAACTGGCAGTCCCAAACCAAATGATTCAAGGCCTTGTATCTCCTACAAATAATGCACCATTGTGAGAACTAAACATAAAGAGTGCCTTTGAACACAGTCCATGGTATTATCTCTCACAGGTGGTTGGAGGATTGACCCCTCTCCTCTGTGTTTCTTCGTCTGTACTGCTTCTTCTATGAGGTATCATTCGGTGGTTTTTATTTCCTTCTCAGGGAACTTAATTTTAGTGTAGTATGGGTGTGGGTTCCAATCGTTACTTTTGGGAGAATACATGCTTGGGAGATAAACACCTCTGCTCTATGTTTCTTTTCCTCATTTGTACTGTCTTTCTTCTATGAGGTGTCGTTGTTTTTCATCTCAGGGAACTTAATTCTCTCTCTTGAGCTTCTTCTTCCTTTCTTTCATCTGGGGAGAAATTCCTCTTCGTCTTTGGTTCATCCGAGGAGAAATTCCTCTTGTTTCTAGATCCCAACCATTCAAGAGGTTTTCTTGTAGCTCTTTTTTCGTTGTTTGGCAGTCTCTTCTTGGGCTACTTGTTGGGTGTTTTCCTCATTTTGGAAGGTGAAAATTCTAAAGAAGGTCAATTTTTTTTTGGTAAATTCTTAATAGTAGGGTCAGTACGTTGGACTGCACCATGGGAAATTCGTCCCATTTGATAAAGCCACTATGCTGTATCCTTTGCAGGGGTGGTTGAGGATCTAGAACACCTTTTTTGGTGGGATTGTTGGTTTGCTACGGTTTTGAACAATTTTTTCCAGATGATGAATGTTTGACTCGATCCAACGTGTACAGTTAAACAATTCTCCTTTTTACATTTATCGAGGAACTTCGTCTTTCCATTTGATAACGTTTTTCTTCCTCTCTTAATCTACTTTTCACGACTATTGAGGAACTCCATCTTACAACTTACATTTGAAACACAAACTTTTTAGCTCCAACATATTAACTCCAGACTTATTAATCCCACCCAGTGGGCCAAATGTCCCCCTAATGTTATGTGAATTTCAAATTAAGACCAACTCAACCCAACCCAAATATGTCATCTATAAGAACGAATAAAGAAAAATAAGGCTTTAGGAAATTATTAAGGATACAGAACTGTTTTTGTGACAATGAAAACACTGGAAGGTGTTTGATTGAAATTTACTTGTCTTTAAGAACGTCATCCATAAAAGAGTATAGCCATTTTTCTTTGGTTTTGATGTGAATGGTTCTTGATACAACTTTGACACTAAGCTCTGAGTAAGTTTGTACATTGTATGCTCGAAATACTTTTTAGAACTTGATTCTGCATATCTGCCGTGATATCCTGATATTGTTCTTGTTCAATAACAGATGGACAGTGTATTGCAACTGTCTCACATGATCGGACCATAAAGCTCTGGTCTGTCAATAGTAAAGATGAACAAACTATGGACGTTGACTGACTTTCATAGCATCGACAGACGGCATGGGAGAATGATGTCTCAAAACTTTGCTGCCTCAGGTGATTAAGAGCTTGGATCAGCTGATCTCCCTTTCTAATTATGCAATATCATGTATCTGATTGAATGCTGAATAGTGAGCCGTTTAAAAATTCTTAGGCAAACCCCTATAGTTTTTTTTCCCTAGATAAGAAATGAAAGGATCATATCAATGGAGGTCATACAAGAAAAGGGGGGAGATGAGATATTCCGCATGTTGAGGTTACAAATGCACACCAGAATTAGAGGAAAAAATTGATTAGTAAATGACATGTAGTTTTCTTTAGATTTTTGTTTGGTTAGAAATGGTTTGTGCACTTAGTAGATTAAGGATATCGAAATCATTCGGTTAAAACATATTTTTAGTTGGTGTTTTGACTTTTGTGAGACTAATTTTGTGTGTAACGATTTAGGTGAGAGTGGAGTTTATGTAAA

mRNA sequence

CTTAGAATAAAATAATTTAGAAAGATAGAGAAATGGAAACCTAAGTAATACTCACTCACTCCTTTGATCTTCCCTCACTCTCACGTGGAGTCCATCTTTTTCCTTGACGCCGGTTCCCTTCCATTCAGCAGCTCCGGGCCGCCGCCGCCGCCGTAGTCTCTCTTCTCGCTCGTGCCGCCTCCTAGCAGTTTGTTACTGTCCGTCTGGCATCCCCGTCATTCCAAATTGGACTGAAACTTCACCTGTTGACGAGGGCAAGTCTGTACCATCCCCGGCGGCTGGAAATGGTGTTTTGACGGGCCGGTGCGGCCTCAGAATAGTACTTACCGTTTCTTCGTGAATGGTTTGGAGCTTGATTGTAGAGGAGGAATGAAAAGAGGAACATAATATCTAGGACAAGCTTGTTTTGTTTAGAAGTTTCATTTCTGAGAGAGCTATCATGGAAGTTGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGATCTTGGTAATCCAGCAGAACTAATTCAACCAGCAGCTACATCAGTTATTCCATCTTCGATTGTCCCTGCCATTGCTCCTATCCCCACTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGGCCCCATGTAACACAAAATGGTGAGATAAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGGGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGTCGTCTTGGTGAACCCATAACCCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGTTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACCGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCAGCTTCACGTCTTGAGCATGCAAAGAGGAAAAGGGATGACCCAGATGAAGATGTGGAAGCCGAAATGGATTGGGCTCTGAGGCAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAATGAGTATTTAGCAACTGCGTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTAAAACATTCGAGGGCCATTTGGACCGCCTTGCACGAATTGCCTTCCACCCGTCAGGCAAGTACTTGGGCACGACTAGCTTTGACAAGACGTGGAGATTATGGGACGTTGAAACTGGTGTAGAGTTACTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCTTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGAACGGGTAGAAGTGTTCTTGCCTTAGAAGGCCATGTCAAGCCAGTCCTTGGAGTTAGTTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGCGAAGATAACACTTGTAGGATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACCTAGTTTCACAGGTGAAATATGAGCCCCAAGAGGGGTACTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATGGACAGTGTATTGCAACTGTCTCACATGATCGGACCATAAAGCTCTGGTCTGTCAATAGTAAAGATGAACAAACTATGGACGTTGACTGACTTTCATAGCATCGACAGACGGCATGGGAGAATGATGTCTCAAAACTTTGCTGCCTCAGGTGATTAAGAGCTTGGATCAGCTGATCTCCCTTTCTAATTATGCAATATCATGTATCTGATTGAATGCTGAATAGTGAGCCGTTTAAAAATTCTTAGGCAAACCCCTATAGTTTTTTTTCCCTAGATAAGAAATGAAAGGATCATATCAATGGAGGTCATACAAGAAAAGGGGGGAGATGAGATATTCCGCATGTTGAGGTTACAAATGCACACCAGAATTAGAGGAAAAAATTGATTAGTAAATGACATGTAGTTTTCTTTAGATTTTTGTTTGGTTAGAAATGGTTTGTGCACTTAGTAGATTAAGGATATCGAAATCATTCGGTTAAAACATATTTTTAGTTGGTGTTTTGACTTTTGTGAGACTAATTTTGTGTGTAACGATTTAGGTGAGAGTGGAGTTTATGTAAA

Coding sequence (CDS)

ATGGAAGTTGATGATCAAAACCCTGCATCAACTGCTGCGGAATCTCCTGAAACCCTTCCTGGTGGTGAAAATGAGGATCTTGGTAATCCAGCAGAACTAATTCAACCAGCAGCTACATCAGTTATTCCATCTTCGATTGTCCCTGCCATTGCTCCTATCCCCACTCCAATTATCCGTCCATTGGCTCCTCTTCCGAGCCGACCTCCCCTCTTTAGGCCCCATGTAACACAAAATGGTGAGATAAGAACAAGTGACTCAGACTCGGAACATGATGAATTGGCTCCTTCCCGAACAGCTCCAGGTTCAACTGCAGAATATGAAGTATCAGAAGAGAGCAGACAGGTAAGGGAGCGTCAGGAAAAAGCCATGCAGGAATTTCTGATGAAGCGTCGTGCTTCTGCTCTAGCAGTGCCTACTAATGACATGGCTGTTCGAGCTCGTCTTCGTCGTCTTGGTGAACCCATAACCCTTTTTGGAGAAAGAGAAATGGAAAGACGGGACAGGTTGCGGTCAATAATGGCACGTTTGGATGCTGAAGGGCAATTAGAGAAGCTGATGAAAGTTCATGAGGAAGAGGAGGCTGCAGCTACTGGTGGAACTGAGGAGGCTGAGGAGGAAGTGCTTCAGTATCCCTTTTATACCGAGGGGTCCAAAGCTCTCTTGGATGCAAGAATTGATATTGCAAAGTATTCCATCCTAAGAGCAGCTTCACGTCTTGAGCATGCAAAGAGGAAAAGGGATGACCCAGATGAAGATGTGGAAGCCGAAATGGATTGGGCTCTGAGGCAGGCTGGAAGTTTGGTCCTGGACTGCAGTGAGATAGGAGATGATCGACCACTTTCTGGTTGTTCTTTCTCATCTGATGGAAAATTCCTTGCCACTAGTTCATTAAGTGGAGTTGCAAAATTGTGGAGCATGCCTCAAGTAAGGAAGGTTTCCAACTTTAAGGGACACACAGAGCGTGTTACTGATGTAATGTTTTCTCCAGTGAATGAGTATTTAGCAACTGCGTCTGCTGACCGAACTGCAAGGTTGTGGTCTGCTGAAGGATCTCTCCTTAAAACATTCGAGGGCCATTTGGACCGCCTTGCACGAATTGCCTTCCACCCGTCAGGCAAGTACTTGGGCACGACTAGCTTTGACAAGACGTGGAGATTATGGGACGTTGAAACTGGTGTAGAGTTACTTCTTCAAGAAGGTCATAGTAGAAGTGTCTATGGGATAGCTTTCCACCATGATGGATCCTTGGTATCATCTTGTGGACTTGATGCACTTGCTCGTGTTTGGGATCTTCGAACGGGTAGAAGTGTTCTTGCCTTAGAAGGCCATGTCAAGCCAGTCCTTGGAGTTAGTTTTTCACCCAATGGTTATCATTTAGCTACTGGTGGCGAAGATAACACTTGTAGGATATGGGATTTAAGGAAGAAAAAATCTCTTTACATAATACCTGCACATTCAAACCTAGTTTCACAGGTGAAATATGAGCCCCAAGAGGGGTACTTCTTGGTTACTGCATCATTTGATATGACAGCAAAGATTTGGTCTGCTCGAGATTTTAAGCCTGTGAAGACACTCTCTGGTCACGAAGCAAAAGTTACATCTTTGGATATAATTTCAGATGGACAGTGTATTGCAACTGTCTCACATGATCGGACCATAAAGCTCTGGTCTGTCAATAGTAAAGATGAACAAACTATGGACGTTGACTGA

Protein sequence

MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPIIRPLAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLEHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDEQTMDVD

Homology

[Close]

BLAST of CcUC08G152920 vs. NCBI nr
Match: XP_038885479.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_038885480.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida])

HSP 1 Score: 1083.9 bits (2802), Expect = 0.0e+00
Identity = 555/569 (97.54%), Postives = 560/569 (98.42%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPIIRP 60
           MEVDDQNPASTAAESPETLPGGENEDL NPAE IQPAATSVIP S+VP+IAPIP PIIRP
Sbjct: 1   MEVDDQNPASTAAESPETLPGGENEDLDNPAEPIQPAATSVIPPSVVPSIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPP FRP VTQNGE+RTSDSDSEHDELAPSRTA GSTAEYEVSEESRQVRERQE
Sbjct: 61  LAPLPSRPPHFRPPVTQNGEMRTSDSDSEHDELAPSRTAGGSTAEYEVSEESRQVRERQE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240

Query: 241 HAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
            AKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDV+FSPVNE LATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKDEQTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDID 569

[Close]

BLAST of CcUC08G152920 vs. NCBI nr
Match: XP_004146749.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >XP_031742738.1 U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >KGN47802.1 hypothetical protein Csa_003570 [Cucumis sativus])

HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00
Identity = 552/569 (97.01%), Postives = 557/569 (97.89%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+L NPAE  QPAATSVIP SIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAPSRTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 HAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
            AKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNE LATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 569

[Close]

BLAST of CcUC08G152920 vs. NCBI nr
Match: XP_008464716.1 (PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903247.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903248.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo] >XP_016903249.1 PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo])

HSP 1 Score: 1073.9 bits (2776), Expect = 4.4e-310
Identity = 548/569 (96.31%), Postives = 556/569 (97.72%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+L NPAE  QPAATSVIP SIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAP+RTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 HAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
            AKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNE LATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD+QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 569

[Close]

BLAST of CcUC08G152920 vs. NCBI nr
Match: XP_022999661.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima])

HSP 1 Score: 1055.4 bits (2728), Expect = 1.7e-304
Identity = 539/570 (94.56%), Postives = 554/570 (97.19%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPII-R 60
           M+VDDQNPASTAAESPE LPGGENEDL NPAE +QPAAT+VIPSSIVP+IAPIP P+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRP V QNGE+RTSDSDSEHDELAPSR   GSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 EHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           E AKRKRDDPDEDVEAEMDWALRQA SL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNFKGHTERVTDV+FSPVNE LATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKKKSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of CcUC08G152920 vs. NCBI nr
Match: KAG6599065.1 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 1052.7 bits (2721), Expect = 1.1e-303
Identity = 538/570 (94.39%), Postives = 553/570 (97.02%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPII-R 60
           M+VDDQNPASTAAESPE LPGGENEDL NPAE +QPAAT+VIPSSIVP+IAPIP P+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRP V QNGE+RTSDSDSEHDELAPSR   GSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 EHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           E AKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPVNE LATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of CcUC08G152920 vs. ExPASy Swiss-Prot
Match: O22212 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana OX=3702 GN=LIS PE=2 SV=1)

HSP 1 Score: 708.8 bits (1828), Expect = 5.1e-203
Identity = 357/539 (66.23%), Postives = 427/539 (79.22%), Query Frame = 0


Query: 37  AATSVIPSSIVPAIAPIPTPIIRPLAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPS 96
           A   V+P S  P +APIP   + P  P+ +RPP FRP V+QNG ++TSDSDSE D+    
Sbjct: 34  AIPPVVPPSFPPPMAPIP---MMPHPPV-ARPPTFRPPVSQNGGVKTSDSDSESDD---- 93

Query: 97  RTAPGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPIT 156
                     E+SEES+QVRERQEKA+Q+ L+KRRA+A+AVPTND AVR RLRRLGEPIT
Sbjct: 94  -------EHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPIT 153

Query: 157 LFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEG 216
           LFGE+EMERR RL  ++ R D  GQL+KL+K HEE+        EE ++EVL+YPF+TEG
Sbjct: 154 LFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTP----KEEVDDEVLEYPFFTEG 213

Query: 217 SKALLDARIDIAKYSILRAASRLEHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGD 276
            K L +ARI+IAK+S+ RAA R++ AKR+RDDPDED++AE  WAL+ A  + LDCS  GD
Sbjct: 214 PKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGD 273

Query: 277 DRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQV-RKVSNFKGHTERVTDVMFSPVNEYLA 336
           DRPL+GCSFS DGK LAT SLSGV KLW MPQV   ++  K H ER TDV+FSPV++ LA
Sbjct: 274 DRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLA 333

Query: 337 TASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVEL 396
           TASADRTA+LW  +G+LL+TFEGHLDRLAR+AFHPSGKYLGTTS+DKTWRLWD+ TG EL
Sbjct: 334 TASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 393

Query: 397 LLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPN 456
           LLQEGHSRSVYGIAF  DG+L +SCGLD+LARVWDLRTGRS+L  +GH+KPV  V+FSPN
Sbjct: 394 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 453

Query: 457 GYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWS 516
           GYHLA+GGEDN CRIWDLR +KSLYIIPAH+NLVSQVKYEPQEGYFL TAS+DM   IWS
Sbjct: 454 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 513

Query: 517 ARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDE-----QTMDVD 570
            RDF  VK+L+GHE+KV SLDI +D  CIATVSHDRTIKLW+ +  D+     +TMD+D
Sbjct: 514 GRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDID 553

[Close]

BLAST of CcUC08G152920 vs. ExPASy Swiss-Prot
Match: Q3MHE2 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 8.1e-116
Identity = 217/459 (47.28%), Postives = 299/459 (65.14%), Query Frame = 0


Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPHSLKVARLW 189

Query: 227 IAKYSILRAASRLEHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEY--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 347 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVTWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 527 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 557
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of CcUC08G152920 vs. ExPASy Swiss-Prot
Match: O43172 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1 SV=2)

HSP 1 Score: 419.1 bits (1076), Expect = 8.1e-116
Identity = 217/459 (47.28%), Postives = 299/459 (65.14%), Query Frame = 0


Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 71  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 130

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 131 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 190

Query: 227 IAKYSILRAASRLEHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 191 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 250

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEY--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          LA+ +
Sbjct: 251 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDPKDVNLASCA 310

Query: 347 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 311 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 370

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 371 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 430

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 431 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 490

Query: 527 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 557
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 491 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 519

[Close]

BLAST of CcUC08G152920 vs. ExPASy Swiss-Prot
Match: Q5NVD0 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 8.1e-116
Identity = 217/459 (47.28%), Postives = 299/459 (65.14%), Query Frame = 0


Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 227 IAKYSILRAASRLEHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRASQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEY--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCNLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 347 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGNFLLTGAYDNTAKIWTHP 489

Query: 527 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 557
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of CcUC08G152920 vs. ExPASy Swiss-Prot
Match: Q9DAW6 (U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=1 SV=1)

HSP 1 Score: 418.3 bits (1074), Expect = 1.4e-115
Identity = 217/459 (47.28%), Postives = 299/459 (65.14%), Query Frame = 0


Query: 107 EVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERR 166
           EV E    + ERQ + + EF  ++RA  + V T+D  V+A LR LGEPITLFGE   ERR
Sbjct: 70  EVFEIEEHISERQAEVLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERR 129

Query: 167 DRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARID 226
           +RLR+I++ +  +     L K  +++E +      +  +E  Q  +Y EG  +L  AR+ 
Sbjct: 130 ERLRNILSVVGTDA----LKKTKKDDEKS------KKSKEEYQQTWYHEGPNSLKVARLW 189

Query: 227 IAKYSILRAASRLEHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFS 286
           IA YS+ RA  RLE A+  ++ P+    ++M    +   SL   CS+IGDDRP+S C FS
Sbjct: 190 IANYSLPRAMKRLEEARLHKEIPETTRTSQMQELHKSLRSLNNFCSQIGDDRPISYCHFS 249

Query: 287 SDGKFLATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEY--------LATAS 346
            + K LAT+  SG+ KLWS+P    +   +GH   V  ++F P +          LA+ +
Sbjct: 250 PNSKMLATACWSGLCKLWSVPDCSLLHTLRGHNTNVGAIVFHPKSTVSLDQKDVNLASCA 309

Query: 347 ADRTARLWSAEG-SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLL 406
           AD + +LWS +    +   EGH  R+AR+ +HPSG++LGTT +D++WRLWD+E   E+L 
Sbjct: 310 ADGSVKLWSLDSDEPVADIEGHTVRVARVMWHPSGRFLGTTCYDRSWRLWDLEAQEEILH 369

Query: 407 QEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGY 466
           QEGHS  VY IAFH DGSL  + GLDA  RVWDLRTGR ++ LEGH+K + G++FSPNGY
Sbjct: 370 QEGHSMGVYDIAFHQDGSLAGTGGLDAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGY 429

Query: 467 HLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR 526
           H+ATG  DNTC++WDLR+++ +Y IPAH NLV+ VK+EP  G FL+T ++D TAKIW+  
Sbjct: 430 HIATGSGDNTCKVWDLRQRRCVYTIPAHQNLVTGVKFEPIHGDFLLTGAYDNTAKIWTHP 489

Query: 527 DFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLW 557
            + P+KTL+GHE KV  LDI SDGQ IAT S+DRT KLW
Sbjct: 490 GWSPLKTLAGHEGKVMGLDISSDGQLIATCSYDRTFKLW 518

[Close]

BLAST of CcUC08G152920 vs. ExPASy TrEMBL
Match: A0A0A0KHD8 (WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G404170 PE=4 SV=1)

HSP 1 Score: 1078.9 bits (2789), Expect = 0.0e+00
Identity = 552/569 (97.01%), Postives = 557/569 (97.89%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+L NPAE  QPAATSVIP SIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAPSRTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPSRTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 HAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
            AKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNE LATASADRTARLWSAEGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSAEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD QTMDVD
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDIQTMDVD 569

[Close]

BLAST of CcUC08G152920 vs. ExPASy TrEMBL
Match: A0A1S4E4U8 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 GN=LOC103502534 PE=4 SV=1)

HSP 1 Score: 1073.9 bits (2776), Expect = 2.1e-310
Identity = 548/569 (96.31%), Postives = 556/569 (97.72%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+L NPAE  QPAATSVIP SIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAP+RTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 HAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
            AKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNE LATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD+QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 569

[Close]

BLAST of CcUC08G152920 vs. ExPASy TrEMBL
Match: A0A6J1KDQ7 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3661 GN=LOC111493950 PE=4 SV=1)

HSP 1 Score: 1055.4 bits (2728), Expect = 8.2e-305
Identity = 539/570 (94.56%), Postives = 554/570 (97.19%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPII-R 60
           M+VDDQNPASTAAESPE LPGGENEDL NPAE +QPAAT+VIPSSIVP+IAPIP P+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRP V QNGE+RTSDSDSEHDELAPSR   GSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYSI+RAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSIVRAASRL 240

Query: 241 EHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           E AKRKRDDPDEDVEAEMDWALRQA SL+LDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLILDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNFKGHTERVTDV+FSPVNE LATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFKGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKKKSL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKKSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of CcUC08G152920 vs. ExPASy TrEMBL
Match: A0A6J1G322 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX=3662 GN=LOC111450343 PE=4 SV=1)

HSP 1 Score: 1052.4 bits (2720), Expect = 7.0e-304
Identity = 537/570 (94.21%), Postives = 553/570 (97.02%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPII-R 60
           M+VDDQNPASTAAESPE LPGGENEDL NPAE +QPAAT+VIPSSIVP+IAPIP P+I R
Sbjct: 1   MDVDDQNPASTAAESPEILPGGENEDLDNPAEPMQPAATTVIPSSIVPSIAPIPPPLITR 60

Query: 61  PLAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQ 120
           PLAPLPSRP LFRP V QNGE+RTSDSDSEHDELAPSR   GSTAEYEVSEESRQVRERQ
Sbjct: 61  PLAPLPSRPLLFRPPVAQNGEMRTSDSDSEHDELAPSRATQGSTAEYEVSEESRQVRERQ 120

Query: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180
           EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE
Sbjct: 121 EKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAE 180

Query: 181 GQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRL 240
           GQLEKL+KVHEEEEAAATGGTEEAEEEVLQYPFYTEG KALLDARIDIAKYS++RAASRL
Sbjct: 181 GQLEKLLKVHEEEEAAATGGTEEAEEEVLQYPFYTEGPKALLDARIDIAKYSVVRAASRL 240

Query: 241 EHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300
           E AKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG
Sbjct: 241 ERAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSG 300

Query: 301 VAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGH 360
           VAK+WSMPQVRKVSNF GHTERVTDV+FSPVNE LATASADRTARLWSAEGSLL+TFEGH
Sbjct: 301 VAKMWSMPQVRKVSNFNGHTERVTDVIFSPVNECLATASADRTARLWSAEGSLLRTFEGH 360

Query: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSS 420
           LDRLARIAFHPSGKYLGTTSFDKTWRLWD+ETGVELLLQEGHSRSVYGI FHHDGSLVSS
Sbjct: 361 LDRLARIAFHPSGKYLGTTSFDKTWRLWDIETGVELLLQEGHSRSVYGIDFHHDGSLVSS 420

Query: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL 480
           CGLDALARVWDLRTGRSVLALEGHVKPVLGV+FSPNGYHLATGGEDNTCRIWDLRKK+SL
Sbjct: 421 CGLDALARVWDLRTGRSVLALEGHVKPVLGVNFSPNGYHLATGGEDNTCRIWDLRKKRSL 480

Query: 481 YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540
           YIIPAHSNL+SQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS
Sbjct: 481 YIIPAHSNLISQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIIS 540

Query: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           DGQCIATVSHDRTIKLWSVNSKDEQTMDVD
Sbjct: 541 DGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570

[Close]

BLAST of CcUC08G152920 vs. ExPASy TrEMBL
Match: A0A5A7TI50 (U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold228G00300 PE=4 SV=1)

HSP 1 Score: 1049.3 bits (2712), Expect = 5.9e-303
Identity = 539/569 (94.73%), Postives = 547/569 (96.13%), Query Frame = 0


Query: 1   MEVDDQNPASTAAESPETLPGGENEDLGNPAELIQPAATSVIPSSIVPAIAPIPTPIIRP 60
           ME+DDQNPASTAAESPETLPGGENE+L NPAE  QPAATSVIP SIVPAIAPIP PIIRP
Sbjct: 1   MEIDDQNPASTAAESPETLPGGENEELDNPAEPTQPAATSVIPPSIVPAIAPIPPPIIRP 60

Query: 61  LAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPSRTAPGSTAEYEVSEESRQVRERQE 120
           LAPLPSRPPLFRP VTQNGE+RTSDSDSEHDELAP+RTAPGSTAEYE+SEESRQ RER E
Sbjct: 61  LAPLPSRPPLFRPPVTQNGELRTSDSDSEHDELAPARTAPGSTAEYEISEESRQARERHE 120

Query: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180
           KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG
Sbjct: 121 KAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPITLFGEREMERRDRLRSIMARLDAEG 180

Query: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRAASRLE 240
           QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRA+SRLE
Sbjct: 181 QLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEGSKALLDARIDIAKYSILRASSRLE 240

Query: 241 HAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGDDRPLSGCSFSSDGKFLATSSLSGV 300
            AKRKRDDPDEDVEAEMDWALRQA SLVLDCSEIGDDRPLSGCSF         SSLSGV
Sbjct: 241 RAKRKRDDPDEDVEAEMDWALRQAESLVLDCSEIGDDRPLSGCSF---------SSLSGV 300

Query: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEGSLLKTFEGHL 360
           AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNE LATASADRTARLWS EGSLLKTFEGHL
Sbjct: 301 AKLWSMPQVRKVSNFKGHTERVTDVMFSPVNECLATASADRTARLWSPEGSLLKTFEGHL 360

Query: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHHDGSLVSSC 420
           DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFH DGSLVSSC
Sbjct: 361 DRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSVYGIAFHQDGSLVSSC 420

Query: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480
           GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY
Sbjct: 421 GLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSLY 480

Query: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540
           IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD
Sbjct: 481 IIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKVTSLDIISD 540

Query: 541 GQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           GQCIATVSHDRTIKLWSVNSKD+QTMD+D
Sbjct: 541 GQCIATVSHDRTIKLWSVNSKDKQTMDID 560

[Close]

BLAST of CcUC08G152920 vs. TAIR 10
Match: AT2G41500.1 (WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related )

HSP 1 Score: 708.8 bits (1828), Expect = 3.6e-204
Identity = 357/539 (66.23%), Postives = 427/539 (79.22%), Query Frame = 0


Query: 37  AATSVIPSSIVPAIAPIPTPIIRPLAPLPSRPPLFRPHVTQNGEIRTSDSDSEHDELAPS 96
           A   V+P S  P +APIP   + P  P+ +RPP FRP V+QNG ++TSDSDSE D+    
Sbjct: 34  AIPPVVPPSFPPPMAPIP---MMPHPPV-ARPPTFRPPVSQNGGVKTSDSDSESDD---- 93

Query: 97  RTAPGSTAEYEVSEESRQVRERQEKAMQEFLMKRRASALAVPTNDMAVRARLRRLGEPIT 156
                     E+SEES+QVRERQEKA+Q+ L+KRRA+A+AVPTND AVR RLRRLGEPIT
Sbjct: 94  -------EHIEISEESKQVRERQEKALQDLLVKRRAAAMAVPTNDKAVRDRLRRLGEPIT 153

Query: 157 LFGEREMERRDRLRSIMARLDAEGQLEKLMKVHEEEEAAATGGTEEAEEEVLQYPFYTEG 216
           LFGE+EMERR RL  ++ R D  GQL+KL+K HEE+        EE ++EVL+YPF+TEG
Sbjct: 154 LFGEQEMERRARLTQLLTRYDINGQLDKLVKDHEEDVTP----KEEVDDEVLEYPFFTEG 213

Query: 217 SKALLDARIDIAKYSILRAASRLEHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIGD 276
            K L +ARI+IAK+S+ RAA R++ AKR+RDDPDED++AE  WAL+ A  + LDCS  GD
Sbjct: 214 PKELREARIEIAKFSVKRAAVRIQRAKRRRDDPDEDMDAETKWALKHAKHMALDCSNFGD 273

Query: 277 DRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQV-RKVSNFKGHTERVTDVMFSPVNEYLA 336
           DRPL+GCSFS DGK LAT SLSGV KLW MPQV   ++  K H ER TDV+FSPV++ LA
Sbjct: 274 DRPLTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVVFSPVDDCLA 333

Query: 337 TASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVEL 396
           TASADRTA+LW  +G+LL+TFEGHLDRLAR+AFHPSGKYLGTTS+DKTWRLWD+ TG EL
Sbjct: 334 TASADRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAEL 393

Query: 397 LLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPN 456
           LLQEGHSRSVYGIAF  DG+L +SCGLD+LARVWDLRTGRS+L  +GH+KPV  V+FSPN
Sbjct: 394 LLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPN 453

Query: 457 GYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWS 516
           GYHLA+GGEDN CRIWDLR +KSLYIIPAH+NLVSQVKYEPQEGYFL TAS+DM   IWS
Sbjct: 454 GYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWS 513

Query: 517 ARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDE-----QTMDVD 570
            RDF  VK+L+GHE+KV SLDI +D  CIATVSHDRTIKLW+ +  D+     +TMD+D
Sbjct: 514 GRDFSLVKSLAGHESKVASLDITADSSCIATVSHDRTIKLWTSSGNDDEDEEKETMDID 553

[Close]

BLAST of CcUC08G152920 vs. TAIR 10
Match: AT2G05720.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 306.6 bits (784), Expect = 4.2e-83
Identity = 167/327 (51.07%), Postives = 197/327 (60.24%), Query Frame = 0


Query: 216 GSKALLDARIDIAKYSILRAASRLEHAKRKRDDPDEDVEAEMDWALRQAGSLVLDCSEIG 275
           G   L +ARI+I K  I RAA R++   R+R+DPDED  AE   AL+    +VL  S+ G
Sbjct: 2   GPTELREARIEITKDFIKRAALRIQRENRRRNDPDEDKNAETKLALKHCKDMVLGSSKFG 61

Query: 276 DDRPLSGCSFSSDGKFLATSSLSGVAKLWSMPQV-RKVSNFKGHTERVTDVMFSPV-NEY 335
           DDRPL+GCS S DGK L T SLSGV KLW +PQV  K+   KGH E VTDV+FS V +E 
Sbjct: 62  DDRPLTGCSLSRDGKILVTCSLSGVPKLWEVPQVTNKIVVLKGHKEHVTDVVFSSVDDEC 121

Query: 336 LATASADRTARLWSAEGSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGV 395
           LATAS DRT ++W  +G+LL+TF+                                    
Sbjct: 122 LATASTDRTEKIWKTDGTLLQTFK------------------------------------ 181

Query: 396 ELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFS 455
                                   +S G D+LARVWDLRT R++L  +GH+K VL V FS
Sbjct: 182 ------------------------ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFS 241

Query: 456 PNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKI 515
           PNGYHLA+GGEDN CRIWDLR +K LYIIPAH NLVSQVKYEPQE YFL TAS DM   I
Sbjct: 242 PNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNI 268

Query: 516 WSARDFKPVKTLSGHEAKVTSLDIISD 541
           WS RDF  VK+L GHE+KV SLDI  D
Sbjct: 302 WSGRDFSLVKSLVGHESKVASLDIAVD 268

[Close]

BLAST of CcUC08G152920 vs. TAIR 10
Match: AT3G49660.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 172.6 bits (436), Expect = 9.4e-43
Identity = 98/290 (33.79%), Postives = 147/290 (50.69%), Query Frame = 0


Query: 277 DRPLSGCSFSSDGKFLATSSLSGVAKLWSM-----PQVRKVSNFKGHTERVTDVMFSPVN 336
           +R +S   FSSDG+ LA++S     + +++     P    V  F GH   ++DV FS   
Sbjct: 24  NRAVSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDA 83

Query: 337 EYLATASADRTARLWSAE-GSLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVE 396
            ++ +AS D+T +LW  E GSL+KT  GH +    + F+P    + + SFD+T R+WDV 
Sbjct: 84  RFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVT 143

Query: 397 TGVELLLQEGHSRSVYGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLAL-EGHVKPVLG 456
           TG  L +   HS  V  + F+ DGSL+ S   D L R+WD  TG  V  L +    PV  
Sbjct: 144 TGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPVSF 203

Query: 457 VSFSPNGYHLATGGEDNTCRIWDLRKKKSLYIIPAHSNLVSQVK--YEPQEGYFLVTASF 516
           V FSPNG  +  G  DNT R+W++   K L     H N    +   +    G  +V+ S 
Sbjct: 204 VRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIVSGSE 263

Query: 517 DMTAKIWSARDFKPVKTLSGHEAKVTSLDIISDGQCIATVSHDRTIKLWS 558
           D    +W     K ++ L GH   V ++        IA+ S D+T+++W+
Sbjct: 264 DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLDKTVRIWT 313

[Close]

BLAST of CcUC08G152920 vs. TAIR 10
Match: AT4G02730.1 (Transducin/WD40 repeat-like superfamily protein )

HSP 1 Score: 146.4 bits (368), Expect = 7.2e-35
Identity = 81/259 (31.27%), Postives = 138/259 (53.28%), Query Frame = 0


Query: 310 RKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEG-SLLKTFEGHLDRLARIAF 369
           R +   +GHT  ++ V FS     LA+AS D+T  LWSA   SL+  +EGH   ++ +A+
Sbjct: 34  RHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGISDLAW 93

Query: 370 HPSGKYLGTTSFDKTWRLWDVETGVELL-LQEGHSRSVYGIAFHHDGSLVSSCGLDALAR 429
                Y  + S D T R+WD  +  E L +  GH+  V+ + F+   +L+ S   D   R
Sbjct: 94  SSDSHYTCSASDDCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSGSFDETIR 153

Query: 430 VWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGEDNTCRIWDLRKKKSL-YIIPAHS 489
           +W+++TG+ V  ++ H  P+  V F+ +G  + +   D +C+IWD ++   L  +I   S
Sbjct: 154 IWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKS 213

Query: 490 NLVSQVKYEPQEGYFLVTASFDMTAKIWSARDFKPVKTLSGHEAKV---TSLDIISDGQC 549
             VS  K+ P  G F++ A+ D T K+ +    K +K  +GH  KV   TS   +++G+ 
Sbjct: 214 PAVSFAKFSP-NGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKY 273

Query: 550 IATVSHDRTIKLWSVNSKD 563
           I + S D  + LW + +++
Sbjct: 274 IVSGSEDNCVYLWDLQARN 291

[Close]

BLAST of CcUC08G152920 vs. TAIR 10
Match: AT2G33340.1 (MOS4-associated complex 3B )

HSP 1 Score: 144.1 bits (362), Expect = 3.6e-34
Identity = 86/288 (29.86%), Postives = 146/288 (50.69%), Query Frame = 0


Query: 292 LATSSLSGVAKLWSMPQVRKVSNFKGHTERVTDVMFSPVNEYLATASADRTARLWSAEG- 351
           +AT  +   A L+  P  + +S   GH+++VT V F   ++ + TASAD+T R+W   G 
Sbjct: 237 IATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDLVLTASADKTVRIWRNPGD 296

Query: 352 ---SLLKTFEGHLDRLARIAFHPSGKYLGTTSFDKTWRLWDVETGVELLLQEGHSRSV-- 411
              +   T   H   +  +  HP+ KY  + S D TW  +D+ +G  L      S++V  
Sbjct: 297 GNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDY 356

Query: 412 YGIAFHHDGSLVSSCGLDALARVWDLRTGRSVLALEGHVKPVLGVSFSPNGYHLATGGED 471
              AFH DG ++ +    ++ ++WD+++  +V   +GH   V  +SFS NGY LAT  ED
Sbjct: 357 TAAAFHPDGLILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSENGYFLATAAED 416

Query: 472 NTCRIWDLRKKKSL-YIIPAHSNLVSQVKYEPQEGYFLVTASFDMTAKIWSAR-DFKPVK 531
              R+WDLRK ++    + A +N    V+++P   Y  + AS     +  S + ++  +K
Sbjct: 417 GV-RLWDLRKLRNFKSFLSADAN---SVEFDPSGSYLGIAASDIKVYQTASVKAEWNLIK 476

Query: 532 TLS--GHEAKVTSLDIISDGQCIATVSHDRTIKLWSVNSKDEQTMDVD 570
           TL       K T +   SD Q +A  S DR ++++ +   ++  +D D
Sbjct: 477 TLPDLSGTGKATCVKFGSDAQYVAVGSMDRNLRIFGLPGDEKANVDDD 520

The following BLAST results are available for this feature:

BLAST of CcUC08G152920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885479.1	0.0e+00	97.54	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Benincasa hispida] >XP_...	[more]
XP_004146749.1	0.0e+00	97.01	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis sativus] >XP_03...	[more]
XP_008464716.1	4.4e-310	96.31	PREDICTED: U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucumis melo...	[more]
XP_022999661.1	1.7e-304	94.56	U4/U6 small nuclear ribonucleoprotein PRP4-like protein [Cucurbita maxima]	[more]
KAG6599065.1	1.1e-303	94.39	U4/U6 small nuclear ribonucleoprotein PRP4-like protein, partial [Cucurbita argy...	[more]

BLAST of CcUC08G152920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O22212	5.1e-203	66.23	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Arabidopsis thaliana ...	[more]
Q3MHE2	8.1e-116	47.28	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Bos taurus OX=9913 GN=PRPF4 PE=2 S...	[more]
O43172	8.1e-116	47.28	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Homo sapiens OX=9606 GN=PRPF4 PE=1...	[more]
Q5NVD0	8.1e-116	47.28	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Pongo abelii OX=9601 GN=PRPF4 PE=2...	[more]
Q9DAW6	1.4e-115	47.28	U4/U6 small nuclear ribonucleoprotein Prp4 OS=Mus musculus OX=10090 GN=Prpf4 PE=...	[more]

BLAST of CcUC08G152920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHD8	0.0e+00	97.01	WD_REPEATS_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G...	[more]
A0A1S4E4U8	2.1e-310	96.31	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo OX=3656 ...	[more]
A0A6J1KDQ7	8.2e-305	94.56	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita maxima OX=3...	[more]
A0A6J1G322	7.0e-304	94.21	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucurbita moschata OX...	[more]
A0A5A7TI50	5.9e-303	94.73	U4/U6 small nuclear ribonucleoprotein PRP4-like protein OS=Cucumis melo var. mak...	[more]

BLAST of CcUC08G152920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G41500.1	3.6e-204	66.23	WD-40 repeat family protein / small nuclear ribonucleoprotein Prp4p-related	[more]
AT2G05720.1	4.2e-83	51.07	Transducin/WD40 repeat-like superfamily protein	[more]
AT3G49660.1	9.4e-43	33.79	Transducin/WD40 repeat-like superfamily protein	[more]
AT4G02730.1	7.2e-35	31.27	Transducin/WD40 repeat-like superfamily protein	[more]
AT2G33340.1	3.6e-34	29.86	MOS4-associated complex 3B	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 175..195
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 68..116
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..36
None	No IPR available	PANTHER	PTHR19846	WD40 REPEAT PROTEIN	coord: 104..563
None	No IPR available	PANTHER	PTHR19846:SF3	BNAC04G01920D PROTEIN	coord: 104..563
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 356..392 score: 10.917412
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 315..347 score: 11.919224
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 440..474 score: 13.2374
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 525..560 score: 11.286501
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 482..515 score: 9.151057
None	No IPR available	PROSITE	PS50294	WD_REPEATS_REGION	coord: 398..435 score: 10.917412
None	No IPR available	CDD	cd00200	WD40	coord: 279..557 e-value: 7.28396E-92 score: 281.916
IPR020472	G-protein beta WD-40 repeat	PRINTS	PR00320	GPROTEINBRPT	coord: 334..348 score: 36.13 coord: 544..558 score: 31.77 coord: 459..473 score: 40.13
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 518..557 e-value: 3.0E-10 score: 50.1 coord: 308..347 e-value: 4.2E-9 score: 46.2 coord: 475..515 e-value: 2.1E-4 score: 30.6 coord: 391..430 e-value: 2.5E-6 score: 37.0 coord: 264..305 e-value: 0.014 score: 24.6 coord: 433..472 e-value: 4.4E-11 score: 52.8 coord: 349..388 e-value: 1.1E-7 score: 41.6
IPR001680	WD40 repeat	PFAM	PF00400	WD40	coord: 350..388 e-value: 1.3E-4 score: 22.7 coord: 399..430 e-value: 5.3E-4 score: 20.7 coord: 312..347 e-value: 2.0E-5 score: 25.2 coord: 437..472 e-value: 5.5E-9 score: 36.5 coord: 520..557 e-value: 1.6E-6 score: 28.7
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 398..439 score: 14.251289
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 440..481 score: 16.958164
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 315..347 score: 14.41838
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 482..524 score: 11.878597
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 356..397 score: 13.482671
IPR001680	WD40 repeat	PROSITE	PS50082	WD_REPEATS_2	coord: 525..566 score: 14.217871
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	SMART	SM00500	pr04_2	coord: 139..192 e-value: 5.3E-18 score: 75.8
IPR014906	Pre-mRNA processing factor 4 (PRP4)-like	PFAM	PF08799	PRP4	coord: 144..171 e-value: 1.1E-12 score: 47.2
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 261..438 e-value: 1.2E-49 score: 170.9
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 439..568 e-value: 1.2E-40 score: 141.5
IPR036285	PRP4-like superfamily	GENE3D	4.10.280.110		coord: 86..186 e-value: 4.2E-15 score: 57.0
IPR036285	PRP4-like superfamily	SUPERFAMILY	158230	PRP4-like	coord: 121..177
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 459..473
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 375..389
IPR019775	WD40 repeat, conserved site	PROSITE	PS00678	WD_REPEATS_1	coord: 417..431
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 274..556

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G152920.1	CcUC08G152920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0000398	mRNA splicing, via spliceosome
cellular_component	GO:0046540	U4/U6 x U5 tri-snRNP complex
molecular_function	GO:0005515	protein binding
molecular_function	GO:0030621	U4 snRNA binding
molecular_function	GO:0017070	U6 snRNA binding