CcUC08G152310 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G152310
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Mitochondrial ATPase inhibitor
Location	CicolChr08: 20586762 .. 20587554 (+)
RNA-Seq Expression	CcUC08G152310
Synteny	CcUC08G152310

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCGAGAACTGAACCGAAGAAACCACGCTGTCACTCTCTCGAACATTTCAATCATATCGCAAATGGCCATGCGATCGGTGCTCAGTCGTTCATCGCTTACTCCCTGGACAGCGCGTGCCGCCGGCGCCGGTGGATTCCAATTCTTCTCCGACGGCAAAGGTCGAGTACTTAGTGAGGAGGAGCGTGCTGCCGAGAACGTCTACATCCAGGTTGAATTATTAGTTTCAAATGTTCGAGAAAAATGTGTAGAAATTAGTAGAACTCCGATTATCGACCTGTTTCTTTTGAATGTTCACTTGTTAGATACTCAGATAGAAATGAACTGGAGCGAGAGCAAAGTTACTGTTTCGATATTTTCTTTTTGTGCGCGGAGTTTGCGTTCTACGATTTATAATAGCAACGATCATCAAACTGTTGGATCGAATGTTCACTTATTCGAAACTCCAATAGAAATAGACTTGAGCGGGAGCATATTTAGTGTTTATATCAGATGGTATTTTCTTTTTGTGCGAGGTGGTTACGTTCTTCGATCTACTGTAGTAGGAGTTGTTTTATCGAATTTCCACTTGGTCGAAACTTTAATTGAAATGCACAGGACTGTAAATGAAGTTATGAACTCTGTGTTCTCCGATTTGTAGTTATTGTTTTTCTAACTTTTGTAGAAAATGGAAAGAGAAAGGCTGGAGAAGCTGAGGCTTAAGGCAGAGAAAGAAAAGGCCGAAAAGGAGAAAGAACAGTCTGAGAAGGTATTCATCACTGTTATGATTTTGGTTGAGCTATTATTTATTAGTTGA

mRNA sequence

CCGAGAACTGAACCGAAGAAACCACGCTGTCACTCTCTCGAACATTTCAATCATATCGCAAATGGCCATGCGATCGGTGCTCAGTCGTTCATCGCTTACTCCCTGGACAGCGCGTGCCGCCGGCGCCGGTGGATTCCAATTCTTCTCCGACGGCAAAGGTCGAGTACTTAGTGAGGAGGAGCGTGCTGCCGAGAACGTCTACATCCAGAAAATGGAAAGAGAAAGGCTGGAGAAGCTGAGGCTTAAGGCAGAGAAAGAAAAGGCCGAAAAGGAGAAAGAACAGTCTGAGAAGGTATTCATCACTGTTATGATTTTGGTTGAGCTATTATTTATTAGTTGA

Coding sequence (CDS)

ATGGCCATGCGATCGGTGCTCAGTCGTTCATCGCTTACTCCCTGGACAGCGCGTGCCGCCGGCGCCGGTGGATTCCAATTCTTCTCCGACGGCAAAGGTCGAGTACTTAGTGAGGAGGAGCGTGCTGCCGAGAACGTCTACATCCAGAAAATGGAAAGAGAAAGGCTGGAGAAGCTGAGGCTTAAGGCAGAGAAAGAAAAGGCCGAAAAGGAGAAAGAACAGTCTGAGAAGGTATTCATCACTGTTATGATTTTGGTTGAGCTATTATTTATTAGTTGA

Protein sequence

MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLRLKAEKEKAEKEKEQSEKVFITVMILVELLFIS

Homology

[Close]

BLAST of CcUC08G152310 vs. NCBI nr
Match: TYK11773.1 (putative uncharacterized transmembrane protein [Cucumis melo var. makuwa])

HSP 1 Score: 132.9 bits (333), Expect = 1.4e-27
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSVLSRSSLTP TARAAGAGGF+F SDGKGRVLSEEERAAENVYIQKMERERLEKLR
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKEKAEKEKEQSEKV 79
          LKAEKEKAEKEKEQSEKV
Sbjct: 61 LKAEKEKAEKEKEQSEKV 78

[Close]

BLAST of CcUC08G152310 vs. NCBI nr
Match: XP_008456607.1 (PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo])

HSP 1 Score: 131.3 bits (329), Expect = 4.2e-27
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSVLSRSSLTP TARAAGAGGF+F SDGKGRVLSEEERAAENVYIQKMERERLEKLR
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKEKAEKEKEQSEK 78
          LKAEKEKAEKEKEQSEK
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of CcUC08G152310 vs. NCBI nr
Match: XP_038884176.1 (uncharacterized protein LOC120075086 [Benincasa hispida])

HSP 1 Score: 129.4 bits (324), Expect = 1.6e-26
Identity = 72/77 (93.51%), Postives = 74/77 (96.10%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSVL RSSLTP TARAAGAGGF+F SDGKGR+LSEEERAAENVYIQKMERERLEKLR
Sbjct: 1  MAMRSVLGRSSLTPLTARAAGAGGFRFLSDGKGRILSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKEKAEKEKEQSEK 78
          LKAEKEKAEKEKEQSEK
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of CcUC08G152310 vs. NCBI nr
Match: XP_022992706.1 (beta-mannosyltransferase 4-like [Cucurbita maxima])

HSP 1 Score: 121.3 bits (303), Expect = 4.3e-24
Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSVLSR S TP T RA+G GGF++FSDGKGRVLSEEERAAENVYIQKMERE+LEKLR
Sbjct: 1  MAMRSVLSRISPTPLTMRASGPGGFRYFSDGKGRVLSEEERAAENVYIQKMEREKLEKLR 60

Query: 61 LKAEKEKAEKEKEQSEK 78
          LKAEKEKAEKEKEQSEK
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of CcUC08G152310 vs. NCBI nr
Match: XP_022939365.1 (beta-mannosyltransferase 4-like [Cucurbita moschata] >XP_023550939.1 beta-mannosyltransferase 4-like [Cucurbita pepo subsp. pepo] >KAG6578822.1 putative protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016349.1 putative protein, mitochondrial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 119.0 bits (297), Expect = 2.1e-23
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSVLSR S TP T RA+G GGF++FSDGKGRVLSEEERAAENVYIQKMERE+LEK R
Sbjct: 1  MAMRSVLSRISPTPLTMRASGPGGFRYFSDGKGRVLSEEERAAENVYIQKMEREKLEKQR 60

Query: 61 LKAEKEKAEKEKEQSEK 78
          LKAEKEKAEKEKEQSEK
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of CcUC08G152310 vs. ExPASy TrEMBL
Match: A0A5D3CIM5 (Uncharacterized transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold304G001000 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 6.9e-28
Identity = 75/78 (96.15%), Postives = 76/78 (97.44%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSVLSRSSLTP TARAAGAGGF+F SDGKGRVLSEEERAAENVYIQKMERERLEKLR
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKEKAEKEKEQSEKV 79
          LKAEKEKAEKEKEQSEKV
Sbjct: 61 LKAEKEKAEKEKEQSEKV 78

[Close]

BLAST of CcUC08G152310 vs. ExPASy TrEMBL
Match: A0A1S3C383 (uncharacterized protein LOC103496516 OS=Cucumis melo OX=3656 GN=LOC103496516 PE=3 SV=1)

HSP 1 Score: 131.3 bits (329), Expect = 2.0e-27
Identity = 74/77 (96.10%), Postives = 75/77 (97.40%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSVLSRSSLTP TARAAGAGGF+F SDGKGRVLSEEERAAENVYIQKMERERLEKLR
Sbjct: 1  MAMRSVLSRSSLTPCTARAAGAGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60

Query: 61 LKAEKEKAEKEKEQSEK 78
          LKAEKEKAEKEKEQSEK
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of CcUC08G152310 vs. ExPASy TrEMBL
Match: A0A6J1JUA9 (beta-mannosyltransferase 4-like OS=Cucurbita maxima OX=3661 GN=LOC111488968 PE=3 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 2.1e-24
Identity = 68/77 (88.31%), Postives = 72/77 (93.51%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSVLSR S TP T RA+G GGF++FSDGKGRVLSEEERAAENVYIQKMERE+LEKLR
Sbjct: 1  MAMRSVLSRISPTPLTMRASGPGGFRYFSDGKGRVLSEEERAAENVYIQKMEREKLEKLR 60

Query: 61 LKAEKEKAEKEKEQSEK 78
          LKAEKEKAEKEKEQSEK
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of CcUC08G152310 vs. ExPASy TrEMBL
Match: A0A6J1FMH8 (beta-mannosyltransferase 4-like OS=Cucurbita moschata OX=3662 GN=LOC111445304 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.0e-23
Identity = 67/77 (87.01%), Postives = 71/77 (92.21%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSVLSR S TP T RA+G GGF++FSDGKGRVLSEEERAAENVYIQKMERE+LEK R
Sbjct: 1  MAMRSVLSRISPTPLTMRASGPGGFRYFSDGKGRVLSEEERAAENVYIQKMEREKLEKQR 60

Query: 61 LKAEKEKAEKEKEQSEK 78
          LKAEKEKAEKEKEQSEK
Sbjct: 61 LKAEKEKAEKEKEQSEK 77

[Close]

BLAST of CcUC08G152310 vs. ExPASy TrEMBL
Match: A0A6J1JS80 (uncharacterized protein LOC111487345 OS=Cucurbita maxima OX=3661 GN=LOC111487345 PE=4 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-23
Identity = 66/77 (85.71%), Postives = 70/77 (90.91%), Query Frame = 0


Query: 1  MAMRSVLSRSSLTPWTARAAGAGGFQFFSDGKGRVLSEEERAAENVYIQKMERERLEKLR 60
          MAMRSV  RSSLTP T RAAG GGF+F SDGKGRVLSEEERAAENVYIQKMERERLEK R
Sbjct: 1  MAMRSVFGRSSLTPSTVRAAGVGGFRFLSDGKGRVLSEEERAAENVYIQKMERERLEKQR 60

Query: 61 LKAEKEKAEKEKEQSEK 78
          LKAEKE+AEK++EQSEK
Sbjct: 61 LKAEKERAEKKEEQSEK 77

[Close]

BLAST of CcUC08G152310 vs. TAIR 10
Match: AT5G04750.1 (F1F0-ATPase inhibitor protein, putative )

HSP 1 Score: 55.5 bits (132), Expect = 2.7e-08
Identity = 33/52 (63.46%), Postives = 42/52 (80.77%), Query Frame = 0


Query: 26 QFFSDGKGRVLSEEERAAENVYIQKMERERLEKLRLKAEKEKAEKEKEQSEK 78
          ++FSD KGRVLSEEERA E++YIQKMERERLEK + K E++K + EK  + K
Sbjct: 37 RYFSDDKGRVLSEEERAKESMYIQKMERERLEK-KKKLEQDKLDGEKGSANK 87

[Close]

BLAST of CcUC08G152310 vs. TAIR 10
Match: AT2G27730.1 (copper ion binding )

HSP 1 Score: 42.4 bits (98), Expect = 2.4e-04
Identity = 23/36 (63.89%), Postives = 31/36 (86.11%), Query Frame = 0


Query: 33 GRVLSEEERAAENVYIQKMERERLEKLRLKAEKEKA 69
          G+VLSEEERAAENV+I+KME+E+L+KL  +   E+A
Sbjct: 17 GKVLSEEERAAENVFIKKMEQEKLQKLARQGPGEQA 52

The following BLAST results are available for this feature:

BLAST of CcUC08G152310 vs. NCBI nr


Match Name	E-value	Identity	Description
TYK11773.1	1.4e-27	96.15	putative uncharacterized transmembrane protein [Cucumis melo var. makuwa]	[more]
XP_008456607.1	4.2e-27	96.10	PREDICTED: uncharacterized protein LOC103496516 [Cucumis melo]	[more]
XP_038884176.1	1.6e-26	93.51	uncharacterized protein LOC120075086 [Benincasa hispida]	[more]
XP_022992706.1	4.3e-24	88.31	beta-mannosyltransferase 4-like [Cucurbita maxima]	[more]
XP_022939365.1	2.1e-23	87.01	beta-mannosyltransferase 4-like [Cucurbita moschata] >XP_023550939.1 beta-mannos...	[more]

BLAST of CcUC08G152310 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC08G152310 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CIM5	6.9e-28	96.15	Uncharacterized transmembrane protein OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3C383	2.0e-27	96.10	uncharacterized protein LOC103496516 OS=Cucumis melo OX=3656 GN=LOC103496516 PE=...	[more]
A0A6J1JUA9	2.1e-24	88.31	beta-mannosyltransferase 4-like OS=Cucurbita maxima OX=3661 GN=LOC111488968 PE=3...	[more]
A0A6J1FMH8	1.0e-23	87.01	beta-mannosyltransferase 4-like OS=Cucurbita moschata OX=3662 GN=LOC111445304 PE...	[more]
A0A6J1JS80	1.8e-23	85.71	uncharacterized protein LOC111487345 OS=Cucurbita maxima OX=3661 GN=LOC111487345...	[more]

BLAST of CcUC08G152310 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G04750.1	2.7e-08	63.46	F1F0-ATPase inhibitor protein, putative	[more]
AT2G27730.1	2.4e-04	63.89	copper ion binding	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 48..78
None	No IPR available	GENE3D	1.20.5.500	Single helix bin	coord: 19..78 e-value: 3.3E-5 score: 25.5
None	No IPR available	PANTHER	PTHR33878:SF4	OS02G0533800 PROTEIN	coord: 1..77
None	No IPR available	PANTHER	PTHR33878	OS08G0559000 PROTEIN	coord: 1..77
IPR007648	Mitochondrial ATPase inhibitor	PFAM	PF04568	IATP	coord: 21..71 e-value: 1.3E-5 score: 25.5

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G152310.1	CcUC08G152310.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032780	negative regulation of ATP-dependent activity
cellular_component	GO:0005747	mitochondrial respiratory chain complex I
cellular_component	GO:0005739	mitochondrion
molecular_function	GO:0042030	ATPase inhibitor activity
molecular_function	GO:0016757	glycosyltransferase activity