CcUC08G151910 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G151910
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	ras-related protein RABC2a-like
Location	CicolChr08: 20187693 .. 20191538 (-)
RNA-Seq Expression	CcUC08G151910
Synteny	CcUC08G151910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AACCAATTCTTTCTTTTCCCAACCATTTTCATTTCTTCTTCTTCTTCTTTCTGAAAAAGGGATTTTTCTCAGAGAAACTTGAAAAGGAGGGAAGAGAAAAGGCTGTTTGTTTTGATTGCTTGTGAGTTGAGAAAAAAAGAATGATGGGTTCTTCTTCCAAAGGAAGATGCAGTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGACCTTTCTCCCACCATCGGTTTTTTCTCTTTCTCTTTCTCTCCATGCATGTTTTGATGGTTAATTCTCATAAAATCGATTTTTTTTCCTTGAAAACCCAGGTTCTCCATTCAGAGTTTTGTTCTTATTTTAATCCTCAAAGAATTCTTGACAGTTCTCTTGGTTGGTTGAACATATGTTGATCAGATACTCTTGTTTTTTTTTTCTTCTCCTTTGTGGTTGGTTTGCTGATCATAATTTTTTTGATTGATTTCCGGAGTCTCAAGTGCTAATTATTGAATTGGGAGTGTTATATGCTTGAATGGTTTCTGGAACTTCAAGGGCTGAAGTGTTGTTGTAGTGTGAGATAGTGGCTTTGTACCAACTTTGTAGTTTAGCAAATTTGTTCCCACATACAGGATTAGTTTAACTGGTATTGAGATGATTAAATTTACCATAGCCCATTTGGGCTTTTAGGTTCATTGGTGAACTAAAATGGATCAAAGCAGGAGGTCTAGTGTTTGAATTTTCTACCTGATTAATATTGATTTTCACTTGTTGGCCACTCTACAAATTCTCAGGAGTGTGAAGAGTGTTAACATATTGATATAACTAAATTTACCATAACCTATCAGTTTTGAGTTCATGGGTGATTTAGCAATTTAAGACAGGAGTTAAGGAGAGTCAATTATACTTGGTGATGCAGGTGCGAGGTGCCCTTAAAGGTTTTCATTGTTGAAGAGTTTGTAGAGACAATTAAAAGGTCGCCTAGAGAGAGTTTTTTTTTTTTCCTTTTATTTTCTTGCTTTTGAAAATGCTACATATAACGTAGAAGAAATTCGAACCTGTAACCTATAAGATGATGTTAGTGTCTAATCACTTGAGCGACACTAAACTTGGTGAGAGCATAGGGTTTTTTTTGCTCAAACAATTAAATTCTGAGAGAGAAGCTTGTGATTTTTCATGACTTATGGATTGGACAGTGACTTGGGTATTACATATGTTTGTAATGCTGCTCATCACTTTTCATTTTAGTCACCATTGCACAATATTCCATATCCCATTTAAATTTAAAAAATTGTTGCAACAAAATGCAATGATATTATGTACGATGGATTGGATGATTGATGCTATTTTAACCTTATAATTCCTCCCTTCCCCGTTTAAGTGTGCTGGGAGAAGCAGCCTCCATTAACTTCTCGAGTAATCTCCGTTTTGGCATTGCTCCAGGTGTGGATTTCAAGATCAAGATGGTGACAGTTGGTGGGAAAAGATTGAAGCTAACAATTTGGGACACAGGTAACTGGATGATTGACTAGTTCTTTCACAGGATATTTTATGAAGTGTTCTTTTTTGCGTCGATTGTGAGAAAATAACAATTGTTCAGGTGTAATAAAAAAGTAACTATCGTGGATTAAATATTCTTTGTTGAGGATTATTTATTTATTTATTTATTGTCATTTCATATATGGCACTTGCTAGTTTGATGCTTTCGTCCACGGTTTTATTCCATGTTCTTGTATGCAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGGTATGATAGAGAGGAGACAAAAATTCTCTGTTCACAATTGTCCTGAAAAACAATCTATGAAATTCTTTTATCTCCTGGAAACATCGATAAGCTTACCTTTCACAAGTTGCTCATTTCATTTTAACTTTCTTGATGGCTTTGTAATTTTAATGAAGACTGTTAAATGATATCAAATGAAAAATGTTCAGCAATTGAGAGCATGTGGAAACTTTTTTCTTGCTAACTAAGACAACGAGAATTGCAAATTGAGATATTAGAAACAGAGCTAAAAAGACGAGGCTTGTGAGCAAGGAAGTAAATCAGTATTTACCTCACCTTCATCTTTTATATTCTCTCATATGTTCTCGTCCACATGTCCAATTCAAGCTGTATTGACAACAAAAGCTCCATTCAAAATGTTTAGCTGTTTTCTTTCCTCCTCATTCGTGGTGTGCTCTTGTTCCTGTGTTTTCTTTCTTGCGTATTATTAGTATATCCAATACCTTTTTATTTTGGAAACTAGCTCTCATGGCATGTTTTTTTCACGCTTGAGTGCATTTGAATTTAGTTTGAACTTTACGAGGCCTGATAGTGATCTATGTTTTGCCAAAAGTGTATGATGTTACCCGACGGGAGACATTTACAAACTTGATGGATGTATGGGCAAAGGAAGTAGAGCTGTATTTAACCAATCGGGAGTGCATAAAGATTCTAGTTGGAAATAAAGTCGATCGAGTAAGTTTGTACTACTATTCAACATTCTGTTGCCATGCTGACTTAATTAGCTTACATTACATTGGGCAACATTGATAATCTTCAAACCTTTAACCCTTCATTCCAACTTACATCAAATTAGGAGAAAACTTTTAAATCATGTTCTTAAATGTGGCGTCGTGTTCTCGAAATCTTATTATTGACAGGGTAGTGAAAGAGCAGTAACAACAGAGGAAGGCATGGAAGTTGCCAAGGAGCATAAAAGTTTGTTTCTTGAGTGTAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAGAGAACTCTCTTCAAAGGTAACTCTCTTAACACTAAGAAGCTCACGTTTTACATGAATCATCTTCCAAACTTCATTGTGTAAGTGTTATTGTGGGACTAGTGACTCCTAAGAATGGCCACTACACATAGTACACCTTTACACTCAAGTATTAGTTTAGAAGCTATAATCAGGATTAGTTGTAATCTTTCTGAACAAAAGCACATAATCTTAATTTCCCTTAAACTCAAAGAAAGCCAAAAGAAAAAAAAAACAACCCATCTGCGCGACGGTTCCATACTTCGAATGTATGATAGTTTGTTGGGGCATTTTCTCTTAACATAGAATCAAAAGTGGCTCTGGCAGTGGCCAAAAACTTTCATTTATTTTCAATGTGAGGTTGGCTGTAAAGTTTCAATCCCGATCCTCGACGTTGAATGTATTTTATCTCATGGCTTTTTAGCATGGTCTAAACTCTAAATTGGTTTAATTATAATCCAGATACTGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACTAGCACGCAAAGAAGCGAACAACGGGGGTTGTTGCCACTGACACAACCGTGCCATACATTACGGATCAAAACAGAACACACAGAAACAGATTTAGAAGATCTCAAGATACTGCTGATGGAAGTTCTTGCCAGAAAAAGATACAAAGGGGCCATCCAAGTTCCAAGGTGATCACATGATCTTTTGCAATTCCATTTGGCCATCACTGTTTTCATCAGTTTTTTCTCCTCTTATCTTACAAAAGGATTAAAAATGCATTTCAATAGTATCTTTGAGATCACTGTATATGGTTGGTTATATTTTGCATTTTGGTTATATATATAAATATATCTAACATCCCATTTGGGCTGTTTGAGGACATGTAAAGAAGTGAGTGGCTGAATTTTGTTGAGTTTATGATTTTGAGTGAAAAAAAAAAATGTAATAAAATATCTCTGTAGATAATGTGAAT

mRNA sequence

AACCAATTCTTTCTTTTCCCAACCATTTTCATTTCTTCTTCTTCTTCTTTCTGAAAAAGGGATTTTTCTCAGAGAAACTTGAAAAGGAGGGAAGAGAAAAGGCTGTTTGTTTTGATTGCTTGTGAGTTGAGAAAAAAAGAATGATGGGTTCTTCTTCCAAAGGAAGATGCAGTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGACCTTTCTCCCACCATCGGTGTGGATTTCAAGATCAAGATGGTGACAGTTGGTGGGAAAAGATTGAAGCTAACAATTTGGGACACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGTGATCTATGTTTTGCCAAAAGTGTATGATGTTACCCGACGGGAGACATTTACAAACTTGATGGATGTATGGGCAAAGGAAGTAGAGCTGTATTTAACCAATCGGGAGTGCATAAAGATTCTAGTTGGAAATAAAGTCGATCGAGGTAGTGAAAGAGCAGTAACAACAGAGGAAGGCATGGAAGTTGCCAAGGAGCATAAAAGTTTGTTTCTTGAGTGTAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAGAGAACTCTCTTCAAAGATACTGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACTAGCACGCAAAGAAGCGAACAACGGGGGTTGTTGCCACTGACACAACCGTGCCATACATTACGGATCAAAACAGAACACACAGAAACAGATTTAGAAGATCTCAAGATACTGCTGATGGAAGTTCTTGCCAGAAAAAGATACAAAGGGGCCATCCAAGTTCCAAGGTGATCACATGATCTTTTGCAATTCCATTTGGCCATCACTGTTTTCATCAGTTTTTTCTCCTCTTATCTTACAAAAGGATTAAAAATGCATTTCAATAGTATCTTTGAGATCACTGTATATGGTTGGTTATATTTTGCATTTTGGTTATATATATAAATATATCTAACATCCCATTTGGGCTGTTTGAGGACATGTAAAGAAGTGAGTGGCTGAATTTTGTTGAGTTTATGATTTTGAGTGAAAAAAAAAAATGTAATAAAATATCTCTGTAGATAATGTGAAT

Coding sequence (CDS)

ATGATGGGTTCTTCTTCCAAAGGAAGATGCAGTAGTTACGATTACTCTTTCAAGATTTTGTTGATTGGGGATTCTGGTGTTGGAAAAAGCAGTATTCTCCTTAGCTACATCTCCAATTTTGTTCATGACCTTTCTCCCACCATCGGTGTGGATTTCAAGATCAAGATGGTGACAGTTGGTGGGAAAAGATTGAAGCTAACAATTTGGGACACAGCTGGACAAGAGAGATTTGGAACATTGACAAGCTCTTACTACAGAGGTGCACATGGAATCATCCTAGTGATCTATGTTTTGCCAAAAGTGTATGATGTTACCCGACGGGAGACATTTACAAACTTGATGGATGTATGGGCAAAGGAAGTAGAGCTGTATTTAACCAATCGGGAGTGCATAAAGATTCTAGTTGGAAATAAAGTCGATCGAGGTAGTGAAAGAGCAGTAACAACAGAGGAAGGCATGGAAGTTGCCAAGGAGCATAAAAGTTTGTTTCTTGAGTGTAGTGCTCGAACTCGAGAAAATGTCGACAGATGCTTTAGAGAACTCTCTTCAAAGATACTGGAAGTTCCAAGTCTACTGGAAAATGGATCTGTTGTTGTGAAACAGAAAATTTTGGACAAAACACTAGCACGCAAAGAAGCGAACAACGGGGGTTGTTGCCACTGA

Protein sequence

MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGGKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEVELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCCH

Homology

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BLAST of CcUC08G151910 vs. NCBI nr
Match: XP_038885704.1 (ras-related protein RABC2a-like [Benincasa hispida])

HSP 1 Score: 408.7 bits (1049), Expect = 3.2e-110
Identity = 208/220 (94.55%), Postives = 210/220 (95.45%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL       VYDVTRRETFTNLMDVWAKE
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL-------VYDVTRRETFTNLMDVWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VE+YLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE
Sbjct: 121 VEMYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCCH 221
           LSSKILEVPSLLENGSVVVKQKILD T ARKEAN+ GCCH
Sbjct: 181 LSSKILEVPSLLENGSVVVKQKILDNTRARKEANDRGCCH 213

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BLAST of CcUC08G151910 vs. NCBI nr
Match: XP_008456546.1 (PREDICTED: ras-related protein RABC2a-like [Cucumis melo])

HSP 1 Score: 396.0 bits (1016), Expect = 2.2e-106
Identity = 202/222 (90.99%), Postives = 208/222 (93.69%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL       VYDVTRRETFTNL+++WAKE
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL-------VYDVTRRETFTNLINIWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VELYLTNRECIKILVGNKVDRGSERAVTTEEGME+AKEHKSLFLECSARTRENVDRCFRE
Sbjct: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRE 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARK--EANNGGCCH 221
           LSSKILEVPSLLENGS+VVKQKILDKT A K  E N+ GCCH
Sbjct: 181 LSSKILEVPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

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BLAST of CcUC08G151910 vs. NCBI nr
Match: XP_022952871.1 (ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related protein RABC2a-like [Cucurbita moschata] >XP_023514704.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >XP_023514780.1 ras-related protein RABC2a-like [Cucurbita pepo subsp. pepo] >KAG6602284.1 Ras-related protein RABC2a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 392.9 bits (1008), Expect = 1.8e-105
Identity = 201/219 (91.78%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R SSYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL       VYDVTRRETFTNLMDVWAKE
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL-------VYDVTRRETFTNLMDVWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VE+YLTN ECIKILVGNKVDRGSERAV+TEEGM VAKEH+SLFLECSARTRENVDRCF+E
Sbjct: 121 VEMYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKE 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           LSSKILEVPSLLENGSVVVKQKILDKT ARKEAN+GGCC
Sbjct: 181 LSSKILEVPSLLENGSVVVKQKILDKTRARKEANDGGCC 212

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BLAST of CcUC08G151910 vs. NCBI nr
Match: XP_004150373.1 (ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Csa_006823 [Cucumis sativus])

HSP 1 Score: 392.1 bits (1006), Expect = 3.1e-105
Identity = 200/222 (90.09%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIIL       VYDVTRRETFTNL++VWAKE
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIIL-------VYDVTRRETFTNLINVWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VELYLTNRECIKILVGNKVDRGS+RAVTTEEGMEVAK+HKSLFLECSARTRENVDRCF+E
Sbjct: 121 VELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKE 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARK--EANNGGCCH 221
           LSSK++EVPSLLENGSVVVKQKILDKT ARK  E N+ GCCH
Sbjct: 181 LSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

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BLAST of CcUC08G151910 vs. NCBI nr
Match: XP_022990456.1 (ras-related protein RABC2a-like [Cucurbita maxima])

HSP 1 Score: 387.5 bits (994), Expect = 7.7e-104
Identity = 199/219 (90.87%), Postives = 204/219 (93.15%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R SSYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL       VYDVTRRETFTNLM VWAKE
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL-------VYDVTRRETFTNLMGVWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VE+YLTN ECIKILVGNKVDRGSERAV+TEEGM VAKEH+SLFLECSARTRENVDRCF+E
Sbjct: 121 VEMYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKE 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           LSSKILEVPSLLENGSVVVKQKILDKT A KEAN+GGCC
Sbjct: 181 LSSKILEVPSLLENGSVVVKQKILDKTRALKEANDGGCC 212

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BLAST of CcUC08G151910 vs. ExPASy Swiss-Prot
Match: O49841 (Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 4.4e-78
Identity = 152/218 (69.72%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEV 121
           KRLKLTIWDTAGQERF TLTSSYYRGA GIIL       VYDVTRRETFTNL+DVW KE+
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIIL-------VYDVTRRETFTNLVDVWGKEI 120

Query: 122 ELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFREL 181
           ELY TN+EC+++LVGNKVDR SER V+ EEG+ +AKE   +FLECSARTR+NV++CF EL
Sbjct: 121 ELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEEL 180

Query: 182 SSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           + KI+EVPSLLE GS  VK+ IL +    +     GCC
Sbjct: 181 ALKIMEVPSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

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BLAST of CcUC08G151910 vs. ExPASy Swiss-Prot
Match: Q9SF92 (Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.7e-72
Identity = 148/218 (67.89%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEV 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIIL       VYDVT+RETF NL D+WAKE+
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIIL-------VYDVTKRETFLNLADIWAKEI 120

Query: 122 ELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFREL 181
           ELY TN +CIK+LVGNKVDR SER V+ EEGM +AK+   LF ECSARTRENV+ CF EL
Sbjct: 121 ELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEEL 180

Query: 182 SSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           + KI+EVPSLLE GS  VK+K          A+ G CC
Sbjct: 181 ALKIMEVPSLLEEGSSSVKRK------PDYRAHQGRCC 203

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BLAST of CcUC08G151910 vs. ExPASy Swiss-Prot
Match: O23657 (Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1)

HSP 1 Score: 262.3 bits (669), Expect = 4.9e-69
Identity = 136/218 (62.39%), Postives = 168/218 (77.06%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSS-GQ-PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEV 121
           K+LKL IWDTAGQERF TLTSSYYRGA GII+       VYDVTRR+TFTNL D+WAKE+
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM-------VYDVTRRDTFTNLSDIWAKEI 120

Query: 122 ELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFREL 181
           +LY TN++CIK+LVGNKVD+ SERAV+ +EG++ A+E+  LFLECSA+TR NV++CF EL
Sbjct: 121 DLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL 180

Query: 182 SSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
             KILE PSL   GS   K+ I  +  A+  + +   C
Sbjct: 181 VLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

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BLAST of CcUC08G151910 vs. ExPASy Swiss-Prot
Match: P36862 (GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.6e-48
Identity = 103/187 (55.08%), Postives = 128/187 (68.45%), Query Frame = 0


Query: 12  SYDYSFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTVGGKRLKLTIWD 71
           S+DY+FK+LL+GDSGVGKS IL  + S  F    + TIGVDFK+K +T  GKR KLTIWD
Sbjct: 5   SHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWD 64

Query: 72  TAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEVELYLTNREC 131
           TAGQERF TLTSSYYRGA GII        VYDVTRR+TF +L   W +E ++Y T    
Sbjct: 65  TAGQERFRTLTSSYYRGAQGIIF-------VYDVTRRDTFESLEANWMREFDIYSTVESA 124

Query: 132 IKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELSSKILEVPS 191
           IK++V NKVD  ++R V++EEG + A+ H  LF+E SAR    V + F EL  KIL+ P 
Sbjct: 125 IKMVVANKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPL 184

Query: 192 LLENGSV 198
           LLE  +V
Sbjct: 185 LLETTAV 184

[Close]

BLAST of CcUC08G151910 vs. ExPASy Swiss-Prot
Match: Q5ZLG1 (Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.7e-45
Identity = 101/205 (49.27%), Postives = 135/205 (65.85%), Query Frame = 0


Query: 16  SFKILLIGDSGVGKSSILLSYISN-FVHDLSPTIGVDFKIKMVTVGGKRLKLTIWDTAGQ 75
           + KIL+IG+SGVGKSS+LL +  + F  +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8   TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67

Query: 76  ERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEVELYLTNRECIKIL 135
           ERF TLT SYYRGA G+IL       VYDVTRR+TF  L D W  E+E Y T  + +K+L
Sbjct: 68  ERFRTLTPSYYRGAQGVIL-------VYDVTRRDTFVKL-DNWLNELETYCTRNDIVKML 127

Query: 136 VGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRELSSKILEVPSLLEN 195
           VGNK+D+   R V   EG++ A++H  LF+E SA+T + V   F EL  KI++ P L E+
Sbjct: 128 VGNKIDK-ENREVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWES 187

Query: 196 GSVVVKQKILDKTLARKEANNGGCC 220
            S     K+ +K    +E + GG C
Sbjct: 188 ESQNKGVKLSNK----EEGHGGGAC 199

[Close]

BLAST of CcUC08G151910 vs. ExPASy TrEMBL
Match: A0A1S3C3K9 (ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=1)

HSP 1 Score: 396.0 bits (1016), Expect = 1.0e-106
Identity = 202/222 (90.99%), Postives = 208/222 (93.69%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL       VYDVTRRETFTNL+++WAKE
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL-------VYDVTRRETFTNLINIWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VELYLTNRECIKILVGNKVDRGSERAVTTEEGME+AKEHKSLFLECSARTRENVDRCFRE
Sbjct: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEIAKEHKSLFLECSARTRENVDRCFRE 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARK--EANNGGCCH 221
           LSSKILEVPSLLENGS+VVKQKILDKT A K  E N+ GCCH
Sbjct: 181 LSSKILEVPSLLENGSIVVKQKILDKTRAHKEVEVNDRGCCH 215

[Close]

BLAST of CcUC08G151910 vs. ExPASy TrEMBL
Match: A0A6J1GLE8 (ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE=4 SV=1)

HSP 1 Score: 392.9 bits (1008), Expect = 8.9e-106
Identity = 201/219 (91.78%), Postives = 206/219 (94.06%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R SSYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL       VYDVTRRETFTNLMDVWAKE
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL-------VYDVTRRETFTNLMDVWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VE+YLTN ECIKILVGNKVDRGSERAV+TEEGM VAKEH+SLFLECSARTRENVDRCF+E
Sbjct: 121 VEMYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKE 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           LSSKILEVPSLLENGSVVVKQKILDKT ARKEAN+GGCC
Sbjct: 181 LSSKILEVPSLLENGSVVVKQKILDKTRARKEANDGGCC 212

[Close]

BLAST of CcUC08G151910 vs. ExPASy TrEMBL
Match: A0A0A0LN27 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1)

HSP 1 Score: 392.1 bits (1006), Expect = 1.5e-105
Identity = 200/222 (90.09%), Postives = 209/222 (94.14%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGRC SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GK+LKLTIWDTAGQERFGTLTSSYYRGAHGIIL       VYDVTRRETFTNL++VWAKE
Sbjct: 61  GKKLKLTIWDTAGQERFGTLTSSYYRGAHGIIL-------VYDVTRRETFTNLINVWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VELYLTNRECIKILVGNKVDRGS+RAVTTEEGMEVAK+HKSLFLECSARTRENVDRCF+E
Sbjct: 121 VELYLTNRECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKE 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARK--EANNGGCCH 221
           LSSK++EVPSLLENGSVVVKQKILDKT ARK  E N+ GCCH
Sbjct: 181 LSSKMMEVPSLLENGSVVVKQKILDKTQARKEVEVNDRGCCH 215

[Close]

BLAST of CcUC08G151910 vs. ExPASy TrEMBL
Match: A0A6J1JMZ9 (ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4 SV=1)

HSP 1 Score: 387.5 bits (994), Expect = 3.7e-104
Identity = 199/219 (90.87%), Postives = 204/219 (93.15%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSK R SSYDYSFKILLIGDSGVGKSSILLSYISNFV DLSPTIGVDFKIKMVTVG
Sbjct: 1   MMGSSSKARSSSYDYSFKILLIGDSGVGKSSILLSYISNFVQDLSPTIGVDFKIKMVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL       VYDVTRRETFTNLM VWAKE
Sbjct: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIIL-------VYDVTRRETFTNLMGVWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VE+YLTN ECIKILVGNKVDRGSERAV+TEEGM VAKEH+SLFLECSARTRENVDRCF+E
Sbjct: 121 VEMYLTNHECIKILVGNKVDRGSERAVSTEEGMAVAKEHQSLFLECSARTRENVDRCFKE 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           LSSKILEVPSLLENGSVVVKQKILDKT A KEAN+GGCC
Sbjct: 181 LSSKILEVPSLLENGSVVVKQKILDKTRALKEANDGGCC 212

[Close]

BLAST of CcUC08G151910 vs. ExPASy TrEMBL
Match: A0A6J1BW00 (ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 PE=4 SV=1)

HSP 1 Score: 372.5 bits (955), Expect = 1.2e-99
Identity = 188/220 (85.45%), Postives = 199/220 (90.45%), Query Frame = 0


Query: 1   MMGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVG 60
           MMGSSSKGR  SYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIK VTVG
Sbjct: 1   MMGSSSKGRWFSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKTVTVG 60

Query: 61  GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKE 120
           GKRLKLTIWDTAGQERFG LTSSYYRGAHGIIL       VYDVTRRETFTNL+++WAKE
Sbjct: 61  GKRLKLTIWDTAGQERFGMLTSSYYRGAHGIIL-------VYDVTRRETFTNLLNIWAKE 120

Query: 121 VELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFRE 180
           VELYLTN ECIKILVGNKVDRGSER V+TEEGM VA EHKS+FLECSA+TRENVDRCFR+
Sbjct: 121 VELYLTNHECIKILVGNKVDRGSERVVSTEEGMAVAAEHKSMFLECSAKTRENVDRCFRD 180

Query: 181 LSSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCCH 221
           L  KIL+VPSLLENGSV +KQ+ILDKT ARK A +GGCCH
Sbjct: 181 LCLKILKVPSLLENGSVAMKQQILDKTRARKAAEDGGCCH 213

[Close]

BLAST of CcUC08G151910 vs. TAIR 10
Match: AT5G03530.1 (RAB GTPase homolog C2A )

HSP 1 Score: 292.4 bits (747), Expect = 3.1e-79
Identity = 152/218 (69.72%), Postives = 177/218 (81.19%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+L+S+IS+ V DL+PTIGVDFKIK +TVGG
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEV 121
           KRLKLTIWDTAGQERF TLTSSYYRGA GIIL       VYDVTRRETFTNL+DVW KE+
Sbjct: 61  KRLKLTIWDTAGQERFRTLTSSYYRGAQGIIL-------VYDVTRRETFTNLVDVWGKEI 120

Query: 122 ELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFREL 181
           ELY TN+EC+++LVGNKVDR SER V+ EEG+ +AKE   +FLECSARTR+NV++CF EL
Sbjct: 121 ELYSTNQECVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEEL 180

Query: 182 SSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           + KI+EVPSLLE GS  VK+ IL +    +     GCC
Sbjct: 181 ALKIMEVPSLLEEGSSAVKRNILKQKPEHQTNTQSGCC 209

[Close]

BLAST of CcUC08G151910 vs. TAIR 10
Match: AT3G09910.1 (RAB GTPase homolog C2B )

HSP 1 Score: 272.3 bits (695), Expect = 3.4e-73
Identity = 148/218 (67.89%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEV 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIIL       VYDVT+RETF NL D+WAKE+
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIIL-------VYDVTKRETFLNLADIWAKEI 120

Query: 122 ELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFREL 181
           ELY TN +CIK+LVGNKVDR SER V+ EEGM +AK+   LF ECSARTRENV+ CF EL
Sbjct: 121 ELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEEL 180

Query: 182 SSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           + KI+EVPSLLE GS  VK+K          A+ G CC
Sbjct: 181 ALKIMEVPSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]

BLAST of CcUC08G151910 vs. TAIR 10
Match: AT3G09910.2 (RAB GTPase homolog C2B )

HSP 1 Score: 272.3 bits (695), Expect = 3.4e-73
Identity = 148/218 (67.89%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEV 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIIL       VYDVT+RETF NL D+WAKE+
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIIL-------VYDVTKRETFLNLADIWAKEI 120

Query: 122 ELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFREL 181
           ELY TN +CIK+LVGNKVDR SER V+ EEGM +AK+   LF ECSARTRENV+ CF EL
Sbjct: 121 ELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEEL 180

Query: 182 SSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           + KI+EVPSLLE GS  VK+K          A+ G CC
Sbjct: 181 ALKIMEVPSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]

BLAST of CcUC08G151910 vs. TAIR 10
Match: AT3G09910.3 (RAB GTPase homolog C2B )

HSP 1 Score: 272.3 bits (695), Expect = 3.4e-73
Identity = 148/218 (67.89%), Postives = 170/218 (77.98%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+ S YD SFKILLIGDSGVGKSS+LLS+IS+ V DL+PTIGVDFKIK + V G
Sbjct: 1   MGSSS-GQ-SGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRG 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEV 121
           KRLKLTIWDTAGQE+F TLTSSY+RG+ GIIL       VYDVT+RETF NL D+WAKE+
Sbjct: 61  KRLKLTIWDTAGQEKFRTLTSSYFRGSQGIIL-------VYDVTKRETFLNLADIWAKEI 120

Query: 122 ELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFREL 181
           ELY TN +CIK+LVGNKVDR SER V+ EEGM +AK+   LF ECSARTRENV+ CF EL
Sbjct: 121 ELYSTNHDCIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEEL 180

Query: 182 SSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
           + KI+EVPSLLE GS  VK+K          A+ G CC
Sbjct: 181 ALKIMEVPSLLEEGSSSVKRK------PDYRAHQGRCC 203

[Close]

BLAST of CcUC08G151910 vs. TAIR 10
Match: AT1G43890.1 (RAB GTPASE HOMOLOG B18 )

HSP 1 Score: 262.3 bits (669), Expect = 3.5e-70
Identity = 136/218 (62.39%), Postives = 168/218 (77.06%), Query Frame = 0


Query: 2   MGSSSKGRCSSYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
           MGSSS G+   +DY FK+LLIGDSGVGKSS+LLS+ SN   DLSPTIGVDFK+K +T+G 
Sbjct: 1   MGSSS-GQ-PEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGE 60

Query: 62  KRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVIYVLPKVYDVTRRETFTNLMDVWAKEV 121
           K+LKL IWDTAGQERF TLTSSYYRGA GII+       VYDVTRR+TFTNL D+WAKE+
Sbjct: 61  KKLKLAIWDTAGQERFRTLTSSYYRGAQGIIM-------VYDVTRRDTFTNLSDIWAKEI 120

Query: 122 ELYLTNRECIKILVGNKVDRGSERAVTTEEGMEVAKEHKSLFLECSARTRENVDRCFREL 181
           +LY TN++CIK+LVGNKVD+ SERAV+ +EG++ A+E+  LFLECSA+TR NV++CF EL
Sbjct: 121 DLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL 180

Query: 182 SSKILEVPSLLENGSVVVKQKILDKTLARKEANNGGCC 220
             KILE PSL   GS   K+ I  +  A+  + +   C
Sbjct: 181 VLKILETPSLTAEGSSGGKKNIFKQNPAQTTSTSSSYC 209

The following BLAST results are available for this feature:

BLAST of CcUC08G151910 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885704.1	3.2e-110	94.55	ras-related protein RABC2a-like [Benincasa hispida]	[more]
XP_008456546.1	2.2e-106	90.99	PREDICTED: ras-related protein RABC2a-like [Cucumis melo]	[more]
XP_022952871.1	1.8e-105	91.78	ras-related protein RABC2a-like [Cucurbita moschata] >XP_022952881.1 ras-related...	[more]
XP_004150373.1	3.1e-105	90.09	ras-related protein RABC2a [Cucumis sativus] >KGN62197.1 hypothetical protein Cs...	[more]
XP_022990456.1	7.7e-104	90.87	ras-related protein RABC2a-like [Cucurbita maxima]	[more]

BLAST of CcUC08G151910 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O49841	4.4e-78	69.72	Ras-related protein RABC2a OS=Arabidopsis thaliana OX=3702 GN=RABC2A PE=1 SV=1	[more]
Q9SF92	4.7e-72	67.89	Ras-related protein RABC2b OS=Arabidopsis thaliana OX=3702 GN=RABC2B PE=2 SV=1	[more]
O23657	4.9e-69	62.39	Ras-related protein RABC1 OS=Arabidopsis thaliana OX=3702 GN=RABC1 PE=1 SV=1	[more]
P36862	3.6e-48	55.08	GTP-binding protein yptV3 OS=Volvox carteri OX=3067 GN=YPTV3 PE=3 SV=1	[more]
Q5ZLG1	1.7e-45	49.27	Ras-related protein Rab-18 OS=Gallus gallus OX=9031 GN=RAB18 PE=2 SV=1	[more]

BLAST of CcUC08G151910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3C3K9	1.0e-106	90.99	ras-related protein RABC2a-like OS=Cucumis melo OX=3656 GN=LOC103496466 PE=4 SV=...	[more]
A0A6J1GLE8	8.9e-106	91.78	ras-related protein RABC2a-like OS=Cucurbita moschata OX=3662 GN=LOC111455431 PE...	[more]
A0A0A0LN27	1.5e-105	90.09	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G326500 PE=4 SV=1	[more]
A0A6J1JMZ9	3.7e-104	90.87	ras-related protein RABC2a-like OS=Cucurbita maxima OX=3661 GN=LOC111487310 PE=4...	[more]
A0A6J1BW00	1.2e-99	85.45	ras-related protein RABC2a-like OS=Momordica charantia OX=3673 GN=LOC111006017 P...	[more]

BLAST of CcUC08G151910 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G03530.1	3.1e-79	69.72	RAB GTPase homolog C2A	[more]
AT3G09910.1	3.4e-73	67.89	RAB GTPase homolog C2B	[more]
AT3G09910.2	3.4e-73	67.89	RAB GTPase homolog C2B	[more]
AT3G09910.3	3.4e-73	67.89	RAB GTPase homolog C2B	[more]
AT1G43890.1	3.5e-70	62.39	RAB GTPASE HOMOLOG B18	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00449	RASTRNSFRMNG	coord: 17..38 score: 47.48 coord: 128..141 score: 42.24 coord: 57..79 score: 50.93 coord: 39..55 score: 34.91 coord: 163..185 score: 36.81
None	No IPR available	SMART	SM00175	rab_sub_5	coord: 17..188 e-value: 1.3E-83 score: 293.8
None	No IPR available	SMART	SM00176	ran_sub_2	coord: 22..219 e-value: 0.0072 score: -7.1
None	No IPR available	SMART	SM00173	ras_sub_4	coord: 14..188 e-value: 1.3E-21 score: 87.8
None	No IPR available	PANTHER	PTHR24073	DRAB5-RELATED	coord: 3..220
None	No IPR available	PANTHER	PTHR24073:SF643	SMALL GTPASE SUPERFAMILY, P-LOOP CONTAINING NUCLEOSIDE TRIPHOSPHATE HYDROLASE-RELATED	coord: 3..220
None	No IPR available	PROSITE	PS51420	RHO	coord: 10..186 score: 9.209312
None	No IPR available	PROSITE	PS51419	RAB	coord: 12..219 score: 28.334055
IPR001806	Small GTPase	SMART	SM00174	rho_sub_3	coord: 19..188 e-value: 3.3E-11 score: 24.1
IPR001806	Small GTPase	PFAM	PF00071	Ras	coord: 18..186 e-value: 1.3E-49 score: 167.9
IPR001806	Small GTPase	PROSITE	PS51421	RAS	coord: 6..209 score: 11.344457
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 10..219 e-value: 4.1E-58 score: 198.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 12..200
IPR005225	Small GTP-binding protein domain	TIGRFAM	TIGR00231	TIGR00231	coord: 15..180 e-value: 3.8E-24 score: 83.3

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G151910.1	CcUC08G151910.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006886	intracellular protein transport
cellular_component	GO:0012505	endomembrane system
molecular_function	GO:0003924	GTPase activity
molecular_function	GO:0005525	GTP binding