CcUC08G151120 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G151120
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	proline-rich proteoglycan 2-like
Location	CicolChr08: 19345450 .. 19346063 (-)
RNA-Seq Expression	CcUC08G151120
Synteny	CcUC08G151120

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTATGCTTCTAGTTTCAATATGATTTGTGTATTCTTGTTGTTTTCTTTAGTTTTTGTGGCGTCATATCTAAATAATGTGGAAGCAAAGAGGGATGAAAGGGGTGATATGCTTTCCTTAGGCTTCAAAAGACTCGTCCCAACTGGCCCAAATCCAGCAACATCTCCTGAAAGTCCTCCATTATCGTTGGGCACAAAGAGACTCGTCCCAACCGGCCCAAATCCAGCAACATCTCAGGAAAGTCCTCCACTAACTTTAGGCACAAAACGACTCGTTCCAACTGGCCCAAATCCAACAAAATCTCCTGAAAGCCCTCCATTGATTTTAGGCATAAAGCGGCTTGGTTCCAACCGACTCAAATCCAACAACATCTCCTCAAAGCCCTCCATTATTTTTGCGCACCAAGAGGCTTGTTCCAACTGGCTCAAACCCAGCAACATTTTCCAAAAGTCCTCCATTGACTTTAGGGACGAAACGACTCGTTCCAACCGGCCCAAATCCAGCAACATCTGCAGAAAGCCCTCTAATAACTTTAGGCACAAAGCGACTTGTCCCAACTGGCCCAAATCCAGCAACATCTCCAAAAAGTCCTCCATTATGATTAGGCACTAA

mRNA sequence

ATGGTTTTTGTGGCGTCATATCTAAATAATGTGGAAGCAAAGAGGGATGAAAGGGGTGATATGCTTTCCTTAGGCTTCAAAAGACTCGTCCCAACTGGCCCAAATCCAGCAACATCTCCTGAAAGTCCTCCATTATCGTTGGGCACAAAGAGACTCGTCCCAACCGGCCCAAATCCAGCAACATCTCAGGAAAGTCCTCCACTAACTTTAGGCACAAAACGACTCGTTCCAACTGGCCCAAATCCAACAAAATCTCCTGAAAGCCCTCCATTGATTTTAGGCATAAAGCGGCTTGGTTCCAACCGACTCAAATCCAACAACATCTCCTCAAAGCCCTCCATTATTTTTGCGCACCAAGAGGCTTGTTCCAACTGGCTCAAACCCAGCAACATTTTCCAAAAGTCCTCCATTGACTTTAGGGACGAAACGACTCGTTCCAACCGGCCCAAATCCAGCAACATCTGCAGAAAGCCCTCTAATAACTTTAGGCACAAAGCGACTTGTCCCAACTGGCCCAAATCCAGCAACATCTCCAAAAAGTCCTCCATTATGATTAGGCACTAA

Coding sequence (CDS)

ATGGTTTTTGTGGCGTCATATCTAAATAATGTGGAAGCAAAGAGGGATGAAAGGGGTGATATGCTTTCCTTAGGCTTCAAAAGACTCGTCCCAACTGGCCCAAATCCAGCAACATCTCCTGAAAGTCCTCCATTATCGTTGGGCACAAAGAGACTCGTCCCAACCGGCCCAAATCCAGCAACATCTCAGGAAAGTCCTCCACTAACTTTAGGCACAAAACGACTCGTTCCAACTGGCCCAAATCCAACAAAATCTCCTGAAAGCCCTCCATTGATTTTAGGCATAAAGCGGCTTGGTTCCAACCGACTCAAATCCAACAACATCTCCTCAAAGCCCTCCATTATTTTTGCGCACCAAGAGGCTTGTTCCAACTGGCTCAAACCCAGCAACATTTTCCAAAAGTCCTCCATTGACTTTAGGGACGAAACGACTCGTTCCAACCGGCCCAAATCCAGCAACATCTGCAGAAAGCCCTCTAATAACTTTAGGCACAAAGCGACTTGTCCCAACTGGCCCAAATCCAGCAACATCTCCAAAAAGTCCTCCATTATGATTAGGCACTAA

Protein sequence

MVFVASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSNRLKSNNISSKPSIIFAHQEACSNWLKPSNIFQKSSIDFRDETTRSNRPKSSNICRKPSNNFRHKATCPNWPKSSNISKKSSIMIRH

Homology

[Close]

BLAST of CcUC08G151120 vs. NCBI nr
Match: XP_022159163.1 (proline-rich proteoglycan 2-like [Momordica charantia])

HSP 1 Score: 126.7 bits (317), Expect = 2.1e-25
Identity = 74/184 (40.22%), Postives = 94/184 (51.09%), Query Frame = 0


Query: 2   VFVASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPAT 61
           V + S  N VEA+RD  GD+L+L  KR VP GPNPATSPE PP +LG KR VPT PNP T
Sbjct: 19  VAILSDANTVEARRDANGDVLALDLKRRVPMGPNPATSPERPPFTLGLKRHVPTDPNPTT 78

Query: 62  SQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSNRLKSNNISSKPSIIFAHQEA 121
           S + PPLTLG KR VPTGPNP  SPESPP I G+KR             +P   F+ +  
Sbjct: 79  SPDRPPLTLGLKRRVPTGPNPATSPESPPFIFGLKRRVPTGPNPATSPERPPFTFSLKRR 138

Query: 122 CSNWLKPSNIFQKSSIDFRDETTRSNRPKSSNICRKPSNNFRHKATCPNWPKSSNISKKS 181
                 P+   ++    F  +      P  +    +P      K   P  P  +   ++ 
Sbjct: 139 VPTGPNPATSPERLPFTFSLKRRVPTGPNPATSPERPPFTLGLKRRVPTGPNPATSPERP 198

Query: 182 SIMI 186
            I +
Sbjct: 199 PITL 202

[Close]

BLAST of CcUC08G151120 vs. NCBI nr
Match: XP_022930205.1 (proline-rich proteoglycan 2-like [Cucurbita moschata])

HSP 1 Score: 107.5 bits (267), Expect = 1.3e-19
Identity = 56/84 (66.67%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 14  KRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTK 73
           K       L+LG KR VPTGPN ATSP++PPL LGTKR V TGPNPATS +SPP +LGTK
Sbjct: 68  KTSPESPRLNLGTKRRVPTGPNRATSPKTPPLGLGTKRCVSTGPNPATSPQSPPSSLGTK 127

Query: 74  RLVPTGPNPTKSPESPPLILGIKR 98
           R VP GPNP  S ESPPL L  KR
Sbjct: 128 RRVPKGPNPATSSESPPLNLVTKR 151

[Close]

BLAST of CcUC08G151120 vs. NCBI nr
Match: XP_042505653.1 (sporozoite surface protein 2-like [Macadamia integrifolia])

HSP 1 Score: 92.4 bits (228), Expect = 4.3e-15
Identity = 52/98 (53.06%), Postives = 59/98 (60.20%), Query Frame = 0


Query: 22  LSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPN 81
           LS G KR VPTGPN A SP  PP S G KR VPTGPN A S + PP + G KR VPTGPN
Sbjct: 125 LSFGLKRRVPTGPNHAESPNKPPSSFGLKRRVPTGPNHAESPDKPPSSFGLKRRVPTGPN 184

Query: 82  PTKSPESPPLILGIKR---LGSNRLKSNNISSKPSIIF 117
             +SP+ PP   G+KR    G N  +S     KP + F
Sbjct: 185 HAESPDKPPSSFGLKRRVPTGPNHAES---PDKPPLSF 219

[Close]

BLAST of CcUC08G151120 vs. NCBI nr
Match: KAF8101604.1 (hypothetical protein N665_0203s0016 [Sinapis alba])

HSP 1 Score: 88.6 bits (218), Expect = 6.3e-14
Identity = 58/119 (48.74%), Postives = 73/119 (61.34%), Query Frame = 0


Query: 4   VASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSL---GTKRLVPTGPNPA 63
           V S LNN  +       ++++G +RLVP+GPN  TSP SPP S+   G KRLVP+GPN  
Sbjct: 46  VPSGLNNKMSLSSPPDSIVTVGVERLVPSGPNNETSPPSPPHSIANFGMKRLVPSGPNNE 105

Query: 64  TSQESPPLTL---GTKRLVPTGPNPTKSPESPPLIL---GIKRLGSNRLKSNNISSKPS 114
           TS  SPP ++   G KRLVP+GPN   SP SPP  +   G+KRL  N    NN +S PS
Sbjct: 106 TSPPSPPHSIAGVGVKRLVPSGPNNETSPPSPPHFITKFGVKRLVPN--GPNNETSPPS 162

[Close]

BLAST of CcUC08G151120 vs. NCBI nr
Match: XP_010489947.1 (PREDICTED: leucine-rich repeat extensin-like protein 5 [Camelina sativa])

HSP 1 Score: 87.4 bits (215), Expect = 1.4e-13
Identity = 54/108 (50.00%), Postives = 64/108 (59.26%), Query Frame = 0


Query: 25  GFKRLVPTGPNPATSPESPPLS---LGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPN 84
           G KRL P+GPN ATSP SP  S   +G KRLVP+GPN  TS  SP   +G KRLVP+GPN
Sbjct: 159 GTKRLAPSGPNNATSPPSPSFSKVDIGVKRLVPSGPNNETSPPSPSSYIGVKRLVPSGPN 218

Query: 85  PTKSPESPPLILGIKRLGSNRLKSNNISSKPSIIFAHQEACSNWLKPS 130
              SP SP    G KRL  +    NN +S PS  F+  +  +  L PS
Sbjct: 219 SETSPPSPSSFFGAKRLVPS--GPNNETSPPSPSFSRADIVTKRLVPS 264

[Close]

BLAST of CcUC08G151120 vs. ExPASy TrEMBL
Match: A0A6J1DY20 (proline-rich proteoglycan 2-like OS=Momordica charantia OX=3673 GN=LOC111025587 PE=4 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.0e-25
Identity = 74/184 (40.22%), Postives = 94/184 (51.09%), Query Frame = 0


Query: 2   VFVASYLNNVEAKRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPAT 61
           V + S  N VEA+RD  GD+L+L  KR VP GPNPATSPE PP +LG KR VPT PNP T
Sbjct: 19  VAILSDANTVEARRDANGDVLALDLKRRVPMGPNPATSPERPPFTLGLKRHVPTDPNPTT 78

Query: 62  SQESPPLTLGTKRLVPTGPNPTKSPESPPLILGIKRLGSNRLKSNNISSKPSIIFAHQEA 121
           S + PPLTLG KR VPTGPNP  SPESPP I G+KR             +P   F+ +  
Sbjct: 79  SPDRPPLTLGLKRRVPTGPNPATSPESPPFIFGLKRRVPTGPNPATSPERPPFTFSLKRR 138

Query: 122 CSNWLKPSNIFQKSSIDFRDETTRSNRPKSSNICRKPSNNFRHKATCPNWPKSSNISKKS 181
                 P+   ++    F  +      P  +    +P      K   P  P  +   ++ 
Sbjct: 139 VPTGPNPATSPERLPFTFSLKRRVPTGPNPATSPERPPFTLGLKRRVPTGPNPATSPERP 198

Query: 182 SIMI 186
            I +
Sbjct: 199 PITL 202

[Close]

BLAST of CcUC08G151120 vs. ExPASy TrEMBL
Match: A0A6J1EWC0 (proline-rich proteoglycan 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436722 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 6.3e-20
Identity = 56/84 (66.67%), Postives = 61/84 (72.62%), Query Frame = 0


Query: 14  KRDERGDMLSLGFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTK 73
           K       L+LG KR VPTGPN ATSP++PPL LGTKR V TGPNPATS +SPP +LGTK
Sbjct: 68  KTSPESPRLNLGTKRRVPTGPNRATSPKTPPLGLGTKRCVSTGPNPATSPQSPPSSLGTK 127

Query: 74  RLVPTGPNPTKSPESPPLILGIKR 98
           R VP GPNP  S ESPPL L  KR
Sbjct: 128 RRVPKGPNPATSSESPPLNLVTKR 151

[Close]

BLAST of CcUC08G151120 vs. ExPASy TrEMBL
Match: A0A6J0NTX1 (leucine-rich repeat extensin-like protein 5 OS=Raphanus sativus OX=3726 GN=LOC108858878 PE=4 SV=1)

HSP 1 Score: 87.4 bits (215), Expect = 6.8e-14
Identity = 56/100 (56.00%), Postives = 62/100 (62.00%), Query Frame = 0


Query: 23  SLGFKRLVPTGPNPATSPESPP---LSLGTKRLVPTGPNPATSQESPP---LTLGTKRLV 82
           S+G KRLVPTGPN  TSP SPP   +  G KRLVPTGPN  TS  SPP      G KRLV
Sbjct: 143 SIGVKRLVPTGPNNETSPPSPPHSTVDFGVKRLVPTGPNNETSPPSPPHFIADFGVKRLV 202

Query: 83  PTGPNPTKSPESPPLIL---GIKRLGSNRLKSNNISSKPS 114
           PTGPN   SP SPP  +   G+KRL  +    NN +S PS
Sbjct: 203 PTGPNNETSPPSPPHFIADFGVKRLVPS--GPNNETSPPS 240

[Close]

BLAST of CcUC08G151120 vs. ExPASy TrEMBL
Match: A0A2N9H747 (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35804 PE=4 SV=1)

HSP 1 Score: 86.3 bits (212), Expect = 1.5e-13
Identity = 53/93 (56.99%), Postives = 61/93 (65.59%), Query Frame = 0


Query: 25  GFKRLVPTGPNPATSPESPPLSLGTKRLVPTGPNPATSQESPPLTLGTKRLVPTGPNPTK 84
           G KRLVP+GPNP    ESPP   G+KRLVP+GPNP    ESPP   G+KRLVP+GPNP  
Sbjct: 33  GSKRLVPSGPNPI---ESPPSLYGSKRLVPSGPNPI---ESPPSLYGSKRLVPSGPNPI- 92

Query: 85  SPESPPLILGIKRL---GSNRLKSNNISSKPSI 115
             ESPP + G KRL   G N +  N I S PS+
Sbjct: 93  --ESPPSLYGSKRLVPSGPNPIGPNPIESPPSL 116

[Close]

BLAST of CcUC08G151120 vs. ExPASy TrEMBL
Match: A0A7J7C9Z9 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00351 PE=4 SV=1)

HSP 1 Score: 85.9 bits (211), Expect = 2.0e-13
Identity = 48/92 (52.17%), Postives = 62/92 (67.39%), Query Frame = 0


Query: 22  LSLGFKRLVPTGPNPATSPESPP-----LSLGTKRLVPTGPNPATSQESPP-----LTLG 81
           L +G KRLVP+GPNP  SP+ PP     L +G+KRLVP+GPNP  S + PP     L +G
Sbjct: 472 LWIGSKRLVPSGPNPEESPDVPPFDKKSLWIGSKRLVPSGPNPEESPDVPPSEKKSLWIG 531

Query: 82  TKRLVPTGPNPTKSPESPPLILGIKRLGSNRL 104
           +KRLVP+GPNP +SP+ PP    +  +GS RL
Sbjct: 532 SKRLVPSGPNPEESPDVPPFDEKLLWIGSKRL 563

The following BLAST results are available for this feature:

BLAST of CcUC08G151120 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022159163.1	2.1e-25	40.22	proline-rich proteoglycan 2-like [Momordica charantia]	[more]
XP_022930205.1	1.3e-19	66.67	proline-rich proteoglycan 2-like [Cucurbita moschata]	[more]
XP_042505653.1	4.3e-15	53.06	sporozoite surface protein 2-like [Macadamia integrifolia]	[more]
KAF8101604.1	6.3e-14	48.74	hypothetical protein N665_0203s0016 [Sinapis alba]	[more]
XP_010489947.1	1.4e-13	50.00	PREDICTED: leucine-rich repeat extensin-like protein 5 [Camelina sativa]	[more]

BLAST of CcUC08G151120 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC08G151120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1DY20	1.0e-25	40.22	proline-rich proteoglycan 2-like OS=Momordica charantia OX=3673 GN=LOC111025587 ...	[more]
A0A6J1EWC0	6.3e-20	66.67	proline-rich proteoglycan 2-like OS=Cucurbita moschata OX=3662 GN=LOC111436722 P...	[more]
A0A6J0NTX1	6.8e-14	56.00	leucine-rich repeat extensin-like protein 5 OS=Raphanus sativus OX=3726 GN=LOC10...	[more]
A0A2N9H747	1.5e-13	56.99	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35804 PE=4 SV=1	[more]
A0A7J7C9Z9	2.0e-13	52.17	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW19G00351 ...	[more]

BLAST of CcUC08G151120 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 148..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 142..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 55..69

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G151120.1	CcUC08G151120.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016020	membrane