CcUC08G150640 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G150640
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	VQ domain-containing protein
Location	CicolChr08: 18827083 .. 18827526 (+)
RNA-Seq Expression	CcUC08G150640
Synteny	CcUC08G150640

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCTGAAAGAAAAGAGGTTCAACTCCAAGGCCCCCGCCCCGCCGCCCTCAAAATCACCAAAGACTCCCACAAGATCAAAAAGCCGCCACTCCCGCCACCGCACCGGCCCGTCATCATTTACACCGTCTCCCCCAAGATCATCCACATCGATCCTACCGAGTTCAAGGACTTGGTCCAACGCCTCACCGGCTGCCAACCCTCTTCGTCCTCCAATGATGCCCTCGACCATCCATCGCATACGACTATGTCGATGCCGATGATTGCGAATAGTACAGATCAAGGAATGGAGAGGGTAGGCCATGGGATATTATCGCCAACGCCGGGGTTGCTGCCTCCGATTTCGCCAAATATTTTCACTCCGCCGCCACAAGCCGCCACTGATCTCAGCCCTTTTGCACACTTTTTCCAAGACTTTAGCCCTNACTTTGAGATGGGACATTAG

mRNA sequence

ATGCCTGAAAGAAAAGAGGTTCAACTCCAAGGCCCCCGCCCCGCCGCCCTCAAAATCACCAAAGACTCCCACAAGATCAAAAAGCCGCCACTCCCGCCACCGCACCGGCCCGTCATCATTTACACCGTCTCCCCCAAGATCATCCACATCGATCCTACCGAGTTCAAGGACTTGGTCCAACGCCTCACCGGCTGCCAACCCTCTTCGTCCTCCAATGATGCCCTCGACCATCCATCGCATACGACTATGTCGATGCCGATGATTGCGAATAGTACAGATCAAGGAATGGAGAGGGTAGGCCATGGGATATTATCGCCAACGCCGGGGTTGCTGCCTCCGATTTCGCCAAATATTTTCACTCCGCCGCCACAAGCCGCCACTGATCTCAGCCCTTTTGCACACTTTTTCCAAGACTTTAGCCCTNACTTTGAGATGGGACATTAG

Coding sequence (CDS)

ATGCCTGAAAGAAAAGAGGTTCAACTCCAAGGCCCCCGCCCCGCCGCCCTCAAAATCACCAAAGACTCCCACAAGATCAAAAAGCCGCCACTCCCGCCACCGCACCGGCCCGTCATCATTTACACCGTCTCCCCCAAGATCATCCACATCGATCCTACCGAGTTCAAGGACTTGGTCCAACGCCTCACCGGCTGCCAACCCTCTTCGTCCTCCAATGATGCCCTCGACCATCCATCGCATACGACTATGTCGATGCCGATGATTGCGAATAGTACAGATCAAGGAATGGAGAGGGTAGGCCATGGGATATTATCGCCAACGCCGGGGTTGCTGCCTCCGATTTCGCCAAATATTTTCACTCCGCCGCCACAAGCCGCCACTGATCTCAGCCCTTTTGCACACTTTTTCCAAGACTTTAGCCCTNACTTTGAGATGGGACATTAG

Protein sequence

MPERKEVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHIDPTEFKDLVQRLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGHGILSPTPGLLPPISPNIFTPPPQAATDLSPFAHFFQDFSPXFEMGH

Homology

[Close]

BLAST of CcUC08G150640 vs. NCBI nr
Match: XP_038885910.1 (protein MKS1-like [Benincasa hispida])

HSP 1 Score: 226.9 bits (577), Expect = 1.2e-55
Identity = 123/150 (82.00%), Postives = 127/150 (84.67%), Query Frame = 0


Query: 1   MPERKEVQLQGPRPAALKITKDSHKIKKPPL----PPPHRPVIIYTVSPKIIHIDPTEFK 60
           MPERKEV LQGPRPAALKITKDSHKIKKPPL    PPPHRPVIIYTVSPKIIH +PTEFK
Sbjct: 1   MPERKEVHLQGPRPAALKITKDSHKIKKPPLPPPHPPPHRPVIIYTVSPKIIHTEPTEFK 60

Query: 61  DLVQRLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGHGILSPTPGLLPPISP 120
           DLVQRLTG +P SSSNDALDHP  T+MSM M  NS DQG+ERVGHGILSPTPGLLPPIS 
Sbjct: 61  DLVQRLTGLRP-SSSNDALDHP--TSMSMSMNTNSIDQGVERVGHGILSPTPGLLPPISS 120

Query: 121 NIFTPPPQ-----AATDLSPFAHFFQDFSP 142
           NIFTPPPQ     AATD SPF  FFQDFSP
Sbjct: 121 NIFTPPPQAAMAAAATDPSPFTQFFQDFSP 147

[Close]

BLAST of CcUC08G150640 vs. NCBI nr
Match: XP_023551504.1 (protein MKS1-like [Cucurbita pepo subsp. pepo] >XP_023551505.1 protein MKS1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 186.4 bits (472), Expect = 1.7e-43
Identity = 98/141 (69.50%), Postives = 108/141 (76.60%), Query Frame = 0


Query: 1   MPERKEVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHIDPTEFKDLVQ 60
           M ERKEVQLQGPRPAALKITKDSHKI K    PPHRPVIIYTVSPK+IH DPT+FKDLVQ
Sbjct: 1   MAERKEVQLQGPRPAALKITKDSHKIGK----PPHRPVIIYTVSPKVIHTDPTQFKDLVQ 60

Query: 61  RLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGHGILSPTPGLLPPISPNIFT 120
           RLTG +PSS       H SH + +  MI ++  QG ERVGHGILSPTPGLLPPI  NIFT
Sbjct: 61  RLTGHKPSS-------HDSHHSPNTTMIMSTNHQGAERVGHGILSPTPGLLPPIPTNIFT 120

Query: 121 PPPQAATDLSPFAHFFQDFSP 142
           P P  + +LSP  HFF+D SP
Sbjct: 121 PTPPQSAELSPLTHFFRDLSP 130

[Close]

BLAST of CcUC08G150640 vs. NCBI nr
Match: KAA0058915.1 (protein MKS1-like [Cucumis melo var. makuwa])

HSP 1 Score: 185.3 bits (469), Expect = 3.9e-43
Identity = 108/155 (69.68%), Postives = 119/155 (76.77%), Query Frame = 0


Query: 1   MPERKEVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHIDPTEFKDL 60
           MPE+KE+QLQGPRP+ALKITKDSHKIKKPPLPP  PHRPVIIYTVSPKIIH DPT+FKDL
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTQFKDL 60

Query: 61  VQRLTGCQ--PSSSSNDAL--DHPSHTTMSMPMIANSTDQ--GMER-VGHGILSPTPGLL 120
           VQRLTG    PSSSSN AL  DHP    +S+P+     DQ  G++R + HGILSPTPGLL
Sbjct: 61  VQRLTGHHQPPSSSSNHALVHDHPPPDPISIPITDAIDDQAGGVDRIIAHGILSPTPGLL 120

Query: 121 PPISPNIF-TPPPQAAT----DLSPFAHFFQDFSP 142
           PPISP IF TPPPQAA     DL+    FF D SP
Sbjct: 121 PPISPTIFSTPPPQAAAAATGDLTSLTQFFHDLSP 155

[Close]

BLAST of CcUC08G150640 vs. NCBI nr
Match: XP_022939148.1 (protein MKS1-like [Cucurbita moschata])

HSP 1 Score: 184.5 bits (467), Expect = 6.6e-43
Identity = 97/141 (68.79%), Postives = 107/141 (75.89%), Query Frame = 0


Query: 1   MPERKEVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHIDPTEFKDLVQ 60
           M ERKE+QLQGPRPAALKITKDSHKI K    PPHRPVIIYTVSPK+IH DPT+FKDLVQ
Sbjct: 1   MAERKELQLQGPRPAALKITKDSHKIGK----PPHRPVIIYTVSPKVIHTDPTQFKDLVQ 60

Query: 61  RLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGHGILSPTPGLLPPISPNIFT 120
           RLTG +PSS       H SH   +  MI ++  QG ERVGHGILSPTPGLLPPI  NIFT
Sbjct: 61  RLTGHKPSS-------HDSHHPPNTTMIMSTNHQGTERVGHGILSPTPGLLPPIPANIFT 120

Query: 121 PPPQAATDLSPFAHFFQDFSP 142
           P P  + +LSP  HFF+D SP
Sbjct: 121 PTPPQSAELSPLTHFFRDLSP 130

[Close]

BLAST of CcUC08G150640 vs. NCBI nr
Match: KAG6578908.1 (Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016429.1 Protein MKS1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 184.5 bits (467), Expect = 6.6e-43
Identity = 97/141 (68.79%), Postives = 107/141 (75.89%), Query Frame = 0


Query: 1   MPERKEVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHIDPTEFKDLVQ 60
           M ERKE+QLQGPRPAALKITKDSHKI K    PPHRPVIIYTVSPK+IH DPT+FKDLVQ
Sbjct: 13  MAERKELQLQGPRPAALKITKDSHKIGK----PPHRPVIIYTVSPKVIHTDPTQFKDLVQ 72

Query: 61  RLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGHGILSPTPGLLPPISPNIFT 120
           RLTG +PSS       H SH   +  MI ++  QG ERVGHGILSPTPGLLPPI  NIFT
Sbjct: 73  RLTGHKPSS-------HDSHHPPNTTMIMSTNHQGAERVGHGILSPTPGLLPPIPANIFT 132

Query: 121 PPPQAATDLSPFAHFFQDFSP 142
           P P  + +LSP  HFF+D SP
Sbjct: 133 PTPPQSAELSPLTHFFRDLSP 142

[Close]

BLAST of CcUC08G150640 vs. ExPASy Swiss-Prot
Match: Q8LGD5 (Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2)

HSP 1 Score: 81.3 bits (199), Expect = 1.0e-14
Identity = 58/158 (36.71%), Postives = 78/158 (49.37%), Query Frame = 0


Query: 3   ERKEVQLQGPRPAALKITKDSHKIKKP---PLPPPHR----------PVIIYTVSPKIIH 62
           +++++Q+ GPRP+ L + KDSHKIKKP   P PPP+R          PV+IY VSPK++H
Sbjct: 18  QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVH 77

Query: 63  IDPTEFKDLVQRLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGH-------- 122
              +EF ++VQRLTG     SS   L+      +S      ST+    R G         
Sbjct: 78  ATASEFMNVVQRLTGI----SSGVFLESGGGGDVSPAARLASTENASPRGGKEPAARDET 137

[Close]

BLAST of CcUC08G150640 vs. ExPASy Swiss-Prot
Match: F4HWF9 (Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 9.0e-11
Identity = 48/121 (39.67%), Postives = 57/121 (47.11%), Query Frame = 0


Query: 11  GPRPAALKITKDSHK-IKKPPLPPPH--------------------RPVIIYTVSPKIIH 70
           GP+P  LK+  DSHK IKKPPL PPH                     PV IYTV+P+IIH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 71  IDPTEFKDLVQRLTG----CQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGHGILS 107
             P  F  LVQRLTG       SSSS+ +   P  T+             M    HG++S
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTST------------MVDTSHGLIS 121

[Close]

BLAST of CcUC08G150640 vs. ExPASy Swiss-Prot
Match: Q9LS54 (VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1)

HSP 1 Score: 63.5 bits (153), Expect = 2.2e-09
Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 12  PRPAALKITKDSHKIKKPPLP-------PPHRPVIIYTVSPKIIHIDPTEFKDLVQRLTG 65
           P P  LK+ KDSH IKKPP P        P  PVIIYT +P+IIH +P +F  LVQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]

BLAST of CcUC08G150640 vs. ExPASy Swiss-Prot
Match: Q9CA36 (VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=VQ8 PE=1 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 1.1e-05
Identity = 44/126 (34.92%), Postives = 60/126 (47.62%), Query Frame = 0


Query: 8   QLQGPRPAALKITKDSHKIKK----PPLPPPH---RPVIIYTVSPKIIHIDPTEFKDLVQ 67
           ++ G RP++LK+  +SH IKK       P PH    PVIIY  SPK+IH    +F  LVQ
Sbjct: 8   EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 67

Query: 68  RLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQ--GMERVGHGILSPTPGLLPPISPNI 125
           RLTG       N +    S  T  + +  ++T      +R     L+  P L  P S  +
Sbjct: 68  RLTGLDEIIRRNTSESSSSVVTEEVNVGDDNTAAPFSQDRTQRQKLTDMP-LFTPSSMTL 127

[Close]

BLAST of CcUC08G150640 vs. ExPASy TrEMBL
Match: A0A5A7UZA1 (Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G00830 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.9e-43
Identity = 108/155 (69.68%), Postives = 119/155 (76.77%), Query Frame = 0


Query: 1   MPERKEVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHIDPTEFKDL 60
           MPE+KE+QLQGPRP+ALKITKDSHKIKKPPLPP  PHRPVIIYTVSPKIIH DPT+FKDL
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTQFKDL 60

Query: 61  VQRLTGCQ--PSSSSNDAL--DHPSHTTMSMPMIANSTDQ--GMER-VGHGILSPTPGLL 120
           VQRLTG    PSSSSN AL  DHP    +S+P+     DQ  G++R + HGILSPTPGLL
Sbjct: 61  VQRLTGHHQPPSSSSNHALVHDHPPPDPISIPITDAIDDQAGGVDRIIAHGILSPTPGLL 120

Query: 121 PPISPNIF-TPPPQAAT----DLSPFAHFFQDFSP 142
           PPISP IF TPPPQAA     DL+    FF D SP
Sbjct: 121 PPISPTIFSTPPPQAAAAATGDLTSLTQFFHDLSP 155

[Close]

BLAST of CcUC08G150640 vs. ExPASy TrEMBL
Match: A0A6J1FKV1 (protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111445144 PE=4 SV=1)

HSP 1 Score: 184.5 bits (467), Expect = 3.2e-43
Identity = 97/141 (68.79%), Postives = 107/141 (75.89%), Query Frame = 0


Query: 1   MPERKEVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHIDPTEFKDLVQ 60
           M ERKE+QLQGPRPAALKITKDSHKI K    PPHRPVIIYTVSPK+IH DPT+FKDLVQ
Sbjct: 1   MAERKELQLQGPRPAALKITKDSHKIGK----PPHRPVIIYTVSPKVIHTDPTQFKDLVQ 60

Query: 61  RLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGHGILSPTPGLLPPISPNIFT 120
           RLTG +PSS       H SH   +  MI ++  QG ERVGHGILSPTPGLLPPI  NIFT
Sbjct: 61  RLTGHKPSS-------HDSHHPPNTTMIMSTNHQGTERVGHGILSPTPGLLPPIPANIFT 120

Query: 121 PPPQAATDLSPFAHFFQDFSP 142
           P P  + +LSP  HFF+D SP
Sbjct: 121 PTPPQSAELSPLTHFFRDLSP 130

[Close]

BLAST of CcUC08G150640 vs. ExPASy TrEMBL
Match: A0A6J1JW33 (protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111489392 PE=4 SV=1)

HSP 1 Score: 182.2 bits (461), Expect = 1.6e-42
Identity = 96/141 (68.09%), Postives = 106/141 (75.18%), Query Frame = 0


Query: 1   MPERKEVQLQGPRPAALKITKDSHKIKKPPLPPPHRPVIIYTVSPKIIHIDPTEFKDLVQ 60
           M ERKEVQLQGPRPAALKITKDSHKI K    PPHRPVIIY+VSPK+IH DPT+FKDLVQ
Sbjct: 1   MAERKEVQLQGPRPAALKITKDSHKIGK----PPHRPVIIYSVSPKVIHTDPTQFKDLVQ 60

Query: 61  RLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGHGILSPTPGLLPPISPNIFT 120
           RLTG +PSS       H SH   +  MI ++   G ERVGHGILSPTPGLLPPI  NIFT
Sbjct: 61  RLTGHKPSS-------HDSHHPPNTTMIMSTNPHGAERVGHGILSPTPGLLPPIPANIFT 120

Query: 121 PPPQAATDLSPFAHFFQDFSP 142
           P P  + +LSP  HFF+D SP
Sbjct: 121 PTPPQSAELSPLTHFFRDLSP 130

[Close]

BLAST of CcUC08G150640 vs. ExPASy TrEMBL
Match: A0A0A0KI80 (VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G338080 PE=4 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.6e-42
Identity = 105/156 (67.31%), Postives = 115/156 (73.72%), Query Frame = 0


Query: 1   MPERKEVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHIDPTEFKDL 60
           MPE+KE+QLQGPRP+ALKITKDSHKIKKPPLPP  PHRPVIIYTVSPKIIH DPTEFKDL
Sbjct: 1   MPEKKELQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTEFKDL 60

Query: 61  VQRLTGCQ--PSSSSNDALDHPSHTT---MSMPMIANSTDQ--GMER-VGHGILSPTPGL 120
           VQRLTG    PSSSSN AL H  H     +S+P   +  D   G++R + HGILSPTPGL
Sbjct: 61  VQRLTGHHQPPSSSSNHALVHDHHPPPDHISIPTTDDPIDDQAGVDRIIAHGILSPTPGL 120

Query: 121 LPPISPNIFTPPPQ-----AATDLSPFAHFFQDFSP 142
           LPPIS  IF PPPQ     AA DL+    FF D SP
Sbjct: 121 LPPISSTIFNPPPQAPAAAAAGDLTSLTQFFHDLSP 156

[Close]

BLAST of CcUC08G150640 vs. ExPASy TrEMBL
Match: A0A1S3B4N1 (protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103485735 PE=4 SV=1)

HSP 1 Score: 176.8 bits (447), Expect = 6.7e-41
Identity = 103/153 (67.32%), Postives = 117/153 (76.47%), Query Frame = 0


Query: 3   ERKEVQLQGPRPAALKITKDSHKIKKPPLPP--PHRPVIIYTVSPKIIHIDPTEFKDLVQ 62
           +++++QLQGPRP+ALKITKDSHKIKKPPLPP  PHRPVIIYTVSPKIIH DPT+FKDLVQ
Sbjct: 35  KKRKLQLQGPRPSALKITKDSHKIKKPPLPPPQPHRPVIIYTVSPKIIHTDPTQFKDLVQ 94

Query: 63  RLTGCQ--PSSSSNDAL--DHPSHTTMSMPMIANSTDQ--GMER-VGHGILSPTPGLLPP 122
           RLTG    PSSSSN AL  DHP    +S+P+     DQ  G++R + HGILSPTPGLLPP
Sbjct: 95  RLTGHHQPPSSSSNHALVHDHPPPDPISIPITDAIDDQAGGVDRIIAHGILSPTPGLLPP 154

Query: 123 ISPNIF-TPPPQAAT----DLSPFAHFFQDFSP 142
           ISP IF TPPPQAA     DL+    FF D SP
Sbjct: 155 ISPTIFSTPPPQAAAAATGDLTSLTQFFHDLSP 187

[Close]

BLAST of CcUC08G150640 vs. TAIR 10
Match: AT3G18690.1 (MAP kinase substrate 1 )

HSP 1 Score: 81.3 bits (199), Expect = 7.3e-16
Identity = 58/158 (36.71%), Postives = 78/158 (49.37%), Query Frame = 0


Query: 3   ERKEVQLQGPRPAALKITKDSHKIKKP---PLPPPHR----------PVIIYTVSPKIIH 62
           +++++Q+ GPRP+ L + KDSHKIKKP   P PPP+R          PV+IY VSPK++H
Sbjct: 18  QKRQLQICGPRPSPLSVHKDSHKIKKPPKHPAPPPNRDQPPPYIPREPVVIYAVSPKVVH 77

Query: 63  IDPTEFKDLVQRLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGH-------- 122
              +EF ++VQRLTG     SS   L+      +S      ST+    R G         
Sbjct: 78  ATASEFMNVVQRLTGI----SSGVFLESGGGGDVSPAARLASTENASPRGGKEPAARDET 137

[Close]

BLAST of CcUC08G150640 vs. TAIR 10
Match: AT1G21326.1 (VQ motif-containing protein )

HSP 1 Score: 73.2 bits (178), Expect = 2.0e-13
Identity = 71/204 (34.80%), Postives = 83/204 (40.69%), Query Frame = 0


Query: 11  GPRPAALKITKDSHK-IKKPPLPPPH--------------------RPVIIYTVSPKIIH 70
           GPRP  LK+  DSHK IKKPPL PPH                     PVIIYTVSP+IIH
Sbjct: 13  GPRPIPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVIIYTVSPRIIH 72

Query: 71  IDPTEFKDLVQRLTG----CQPSSSSNDALDHP---------SHTTMS---------MPM 130
             P  F  LVQRLTG       SSS + +   P         SH  +S            
Sbjct: 73  THPNNFMTLVQRLTGKTSTSTTSSSYSSSTSAPKDASTMVDTSHGLISPAARFAVTEKAN 132

Query: 131 IANS----------------------------TDQGMERVGH---GILSPTPGLLPPISP 141
           I+N                              +QG ER      GILSP P  LP +SP
Sbjct: 133 ISNELGTFVGGEGTMDQYYHYHHHHHHQEQQHQNQGFERPSFHHAGILSPGPNSLPSVSP 192

[Close]

BLAST of CcUC08G150640 vs. TAIR 10
Match: AT1G21320.1 (nucleotide binding;nucleic acid binding )

HSP 1 Score: 68.2 bits (165), Expect = 6.4e-12
Identity = 48/121 (39.67%), Postives = 57/121 (47.11%), Query Frame = 0


Query: 11  GPRPAALKITKDSHK-IKKPPLPPPH--------------------RPVIIYTVSPKIIH 70
           GP+P  LK+  DSHK IKKPPL PPH                     PV IYTV+P+IIH
Sbjct: 13  GPKPTPLKVRGDSHKIIKKPPLAPPHPQPQPPQTHQQEPSQSRPPPGPVNIYTVTPRIIH 72

Query: 71  IDPTEFKDLVQRLTG----CQPSSSSNDALDHPSHTTMSMPMIANSTDQGMERVGHGILS 107
             P  F  LVQRLTG       SSSS+ +   P  T+             M    HG++S
Sbjct: 73  THPNNFMTLVQRLTGQTSTSTTSSSSSSSTSEPKDTST------------MVDTSHGLIS 121

[Close]

BLAST of CcUC08G150640 vs. TAIR 10
Match: AT3G18360.1 (VQ motif-containing protein )

HSP 1 Score: 63.5 bits (153), Expect = 1.6e-10
Identity = 33/60 (55.00%), Postives = 39/60 (65.00%), Query Frame = 0


Query: 12  PRPAALKITKDSHKIKKPPLP-------PPHRPVIIYTVSPKIIHIDPTEFKDLVQRLTG 65
           P P  LK+ KDSH IKKPP P        P  PVIIYT +P+IIH +P +F  LVQ+LTG
Sbjct: 41  PSPPTLKVNKDSHVIKKPPSPSSFSSAAKPRHPVIIYTHTPRIIHTNPKDFMALVQKLTG 100

[Close]

BLAST of CcUC08G150640 vs. TAIR 10
Match: AT1G68450.1 (VQ motif-containing protein )

HSP 1 Score: 51.2 bits (121), Expect = 8.1e-07
Identity = 44/126 (34.92%), Postives = 60/126 (47.62%), Query Frame = 0


Query: 8   QLQGPRPAALKITKDSHKIKK----PPLPPPH---RPVIIYTVSPKIIHIDPTEFKDLVQ 67
           ++ G RP++LK+  +SH IKK       P PH    PVIIY  SPK+IH    +F  LVQ
Sbjct: 8   EINGSRPSSLKLAGESHTIKKTSSCKSKPRPHGRASPVIIYAHSPKVIHTRAEDFMALVQ 67

Query: 68  RLTGCQPSSSSNDALDHPSHTTMSMPMIANSTDQ--GMERVGHGILSPTPGLLPPISPNI 125
           RLTG       N +    S  T  + +  ++T      +R     L+  P L  P S  +
Sbjct: 68  RLTGLDEIIRRNTSESSSSVVTEEVNVGDDNTAAPFSQDRTQRQKLTDMP-LFTPSSMTL 127

The following BLAST results are available for this feature:

BLAST of CcUC08G150640 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038885910.1	1.2e-55	82.00	protein MKS1-like [Benincasa hispida]	[more]
XP_023551504.1	1.7e-43	69.50	protein MKS1-like [Cucurbita pepo subsp. pepo] >XP_023551505.1 protein MKS1-like...	[more]
KAA0058915.1	3.9e-43	69.68	protein MKS1-like [Cucumis melo var. makuwa]	[more]
XP_022939148.1	6.6e-43	68.79	protein MKS1-like [Cucurbita moschata]	[more]
KAG6578908.1	6.6e-43	68.79	Protein MKS1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016429.1 Prot...	[more]

BLAST of CcUC08G150640 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LGD5	1.0e-14	36.71	Protein MKS1 OS=Arabidopsis thaliana OX=3702 GN=MKS1 PE=1 SV=2	[more]
F4HWF9	9.0e-11	39.67	Nuclear speckle RNA-binding protein B OS=Arabidopsis thaliana OX=3702 GN=NSRB PE...	[more]
Q9LS54	2.2e-09	55.00	VQ motif-containing protein 20 OS=Arabidopsis thaliana OX=3702 GN=VQ20 PE=2 SV=1	[more]
Q9CA36	1.1e-05	34.92	VQ motif-containing protein 8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=...	[more]

BLAST of CcUC08G150640 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7UZA1	1.9e-43	69.68	Protein MKS1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G008...	[more]
A0A6J1FKV1	3.2e-43	68.79	protein MKS1-like OS=Cucurbita moschata OX=3662 GN=LOC111445144 PE=4 SV=1	[more]
A0A6J1JW33	1.6e-42	68.09	protein MKS1-like OS=Cucurbita maxima OX=3661 GN=LOC111489392 PE=4 SV=1	[more]
A0A0A0KI80	4.6e-42	67.31	VQ domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G338080 PE=4 SV=...	[more]
A0A1S3B4N1	6.7e-41	67.32	protein MKS1-like OS=Cucumis melo OX=3656 GN=LOC103485735 PE=4 SV=1	[more]

BLAST of CcUC08G150640 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G18690.1	7.3e-16	36.71	MAP kinase substrate 1	[more]
AT1G21326.1	2.0e-13	34.80	VQ motif-containing protein	[more]
AT1G21320.1	6.4e-12	39.67	nucleotide binding;nucleic acid binding	[more]
AT3G18360.1	1.6e-10	55.00	VQ motif-containing protein	[more]
AT1G68450.1	8.1e-07	34.92	VQ motif-containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008889	VQ	PFAM	PF05678	VQ	coord: 42..67 e-value: 2.6E-11 score: 42.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..33
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..91
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 63..107
None	No IPR available	PANTHER	PTHR33143:SF6	F16F4.1 PROTEIN	coord: 90..144 coord: 4..72
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 4..72
IPR039607	VQ motif-containing protein 8/17/18/20/21/25	PANTHER	PTHR33143	F16F4.1 PROTEIN-RELATED	coord: 90..144

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G150640.1	CcUC08G150640.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005886	plasma membrane