CcUC08G149760 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G149760
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionTLC domain-containing protein
LocationCicolChr08: 17546246 .. 17550334 (-)
RNA-Seq ExpressionCcUC08G149760
SyntenyCcUC08G149760
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTCTCCTGTCTCCGGTCTCTTCATTTCTGTTTCTGTCAATCCTCGTCTTCTCCAGCCGATACAGAACAGACGATTGAGCTCCACAGCGAATCAATGGCGGGAAGGACAGTGTTGAAGGAGAAGAGCAGGGCAGCAAGCTTCTTCTCCGCGACATTAGTGCCTTGGTCAGTCTCTCTATGGTTCGAAATTCTCTTCGACCGGCGCTTCGAGCTGCTCTACGTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTGTTTCCAAGGATCCTCTCTTAGTCAACACCTCCGTCTCTCTCCTTCATTCCACTATCACCTCTGCTTCAGGTTCTCTGCCGCTCTTTTACCCTCGCGTTGATTGTTCTCTTTTTTTTTTTTTTTCTTTTTTTTTTTTTTTTTCTTTTAATTCTACTTCTTTGTGAGTGATCTTATATCTTCCTTGCTCACTGTTTGATTCTTTGTTTGGGAGTTACTTCTTCGACTTGCTTGAAGGTTTTACTGATTGGAATAAGAAACTTTATTTGCACTTTAAGAAAGACTGAGAGTAGTTCGTGCTTCGTTATTGCAAGTTGTGTTGTAAATTGTATGAATTATTAGTTATTGATGTGGTTTAGTGCGTATGCTACGGTGGGTTGTTGAGCGGATGAACCGAGCACGGATGAATTATTTTGGAGTTCTTTTCCATTGCTAAGAATATCAAGAATTTGTTCTTTACTCCTATAGACCTTGGTCAAATTATAAAATTGAACCCCAGTTTTTAAGTTTTAGTTCTTGTATTTGTAACAGTTTCAGTTACATATCTGAATTTTAGATTATCTTTCTATTTATTCCATTAGAATGCAGGGCATGTTTAGCAGTGAAACACATGTTTCAAAATTAATTTTAATAGTATAAAAATCGTGTTCGAAAGTGTAAAATCAAACCTCAAATTGGTTTTGAATGATTAAAGTATTTTTTCGAAATGATCTTAAATATTACAAGTGATCTTAAAGTCACTCTCAAACGTGTCCGGGCCTTCACCTAATATGCATTCTGTTAAAATTAATTCAATGGACAAAGGCTAAACAAAATACAGTTTAAAATTCAGAGATAGGAATTGCTCTTTTTTTTTTTTTTTCTTTTTAAGCTTTAAGATTATATAAACACCGTGCTTCCTTCCTCTCCACTCTCTTACATGTCGTACCCCTTTTTTTTGCGGAGATTCTGTTCTCCTATGTTTTCATGAAGTTTAAAACAAGGTGAAAAAATAGACTGTCTTAATTGATAGGCAAGAAAAGAAAGGTTGCGAATCGATAAACAGATGGAGTGTTGTCGATAAAGGATGTTTTAGGAAAAGAAAGCTTCAGTTGTTTCCCATATTAGTCTAGGAAAAGAAATCTTAGTAACATAGACAAGGGCCGTCCATTTGACCTGTTAGGATTAATGAAGATCTCTAACCTCAACATGTCTCTAAAATCAAACAAGTCAGTTTTGTTTTGCTATACTAGAATTCTGCTTGCTTCCTCTCCTTTCTGTACCTATCTTTGCATTGTATGCTTATCGATGCATAAGCTAAGGGAAAAAAGATGTTATTGTTGGGTTGATGGAGAGAACAGAAAATGGGGGGATCTTGTATTATAAAGATGCTTGCTAAAAGAATCCGGACTATTATGCGAGTAAAGGCTGTCTGCCGACCAAGATGTCTAAAATTTGTTAATGATGTGAGAGATTTTCTCTTGGCTCCATCAGCAACTTCTTTATATTGTTGAAGGTTGAGGAAATAAGGTTGAGGAAATGAGGTTCAAAGCCTAAAGGTAAACTAACTTTTTAATTGTAAGGTTTGAACAGATGTATTATTAATTCCTATTGTTCAAGATAGAGGAAGGCTGCTACATCGGCCTTGGTTACCACATGATTTTAACCCGAAGCGTTTCGATGGCTCAATATTTTTTGAATTTCAATAGGTTATCCTATTCTTTGGGCCATCTAGTTAAGTCATCTCTGCAATGATTTAATTACAGTGCTGTTTGTTTTGGTGAATCGGTGGCTGAGTTATGGTTCGGAGGGGATGTTTGAGCATTCACAATTGTTTGGAGGAACATGGCCGTGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCGTATGATCAGTGGGATATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCGATCTTAGTTCATCATCTGGTTCTTCTCATTTGCTTTACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGGTATGCATTAGTTTCTTCTTGCAAGATGTGCCTTATGAATATGCTGCTTTCTTTGTTTATGTTTCCGGTCCTTTCTGGATTTATGCATTTCTGTTATCCCCATCGACATGGACAATTGCGACGTCCCCTTTAACGACTTTGACACAGGCACAAGGATAAGATCTCCAAGAATTTACAACGATTTCGGATTTAAGTTGTTTTTCAAAGAAACGTAATAGATAGTTACTTTATGTTGTGCTTTCAGATTACGGTCTAACTTAATCTCCTGTGGCACCCAGATTCTTTTCTGACGTCTTTCTCTATGCACTTTCTTAAACTAACTTCTCTTTGCATTCACCCTTTCACATTGATCTTCTCCTTTACACAATTTTTGACACTTTTCTCTTAGTTAACCGTTCTCTTACTAGCTCTTTTCTATGCACATCTTCTCTCCATGTGTACACTTTCCATGACTAGTCTCTCGTTGTATACATCTTTGCTTATTGGTTAAATTACAAGTTTAGTCTCTAAGTTTTGACCTTTTTGTGTATTTAGTCTCTGAACTTTCAAAATTGTCAATAAGTCTTTAAATTTTTATTTCGTGTTTATGTTTGAATTTTTTATAATTAATTGGTTTATTGGTTATAAATTTGGATTTTATGTCACATGAAACTCTAAATTTTCAATATTTTGTTTAGTAGATATATGAATTTAAAAAATATACATATCAAACAGGTCAAGCATCTATTAGACACAAAATTAAAAATTTGAGGATCTCTTGAATACAAATATGCAAGTTTAAAGAGTTATTAAATACTTTTTAAAAGTTTAGAGACTTGTTGAATACAAAATTGCAATTTAGGGACTTAGGATTTACTAAACACTTTTGAAAGTTCATAGGATGACACAACCTAAAAAAATGTTTAGTGATTAAACTTGTAATTTAACTGTCTATTTCTACACAATCTCTCTCTGTTTTTATTCTCTCTTTTTCATAAGTCAATTCTACGCAATCTCTCTTAATATGTCTCCCCCACACACCACCTCTCACTTGTTTTCTTGGTTTATTTATTGATCTGATTATACACACACGTACACCCATTATAATGCTCAAATCAAAGAACATGCCTTTAGGGGAAAAATAGTCATCTTATTTAGCAAATGAGAGAAAACGAACTTTTACTTTCTATGCCCGTTTAGAAGGACTCTGGAAGCCAGTCAGATCTATTCTTAGAACAACCATACTCTATTAGAAGCAAACCAAGTTTTCTTGTCATTTTTTACTTCCATCTTTTGATATGCAAAACTGAAACAAGAATCGTTTTTGATGTCCCAGATGCATTCTATTTTTCTCCATGTAAGGCGATTACGAAGGATGGCAGGTGTTCGTGACGCTAAGAGTGTTATCGTTAAAGTCGAATGGATTCTCAACTGGCTAACATTCGTTTTCGCAAGGTTTGTTCCACACATTCTCATTACTGCGAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCATCGAGCTGCCACTTGCACTGTCTGGGATGGCTGGCATGAACCTGCTGAATGCTTTGCTTGGCATTGATCTCTTAAACGCCGTAAGGAAAGAGAGTAATTACCAGAAAACTGATCAATCTCATCATGAATGAAGGAGGACCAACTTTGGTGGAAATTGTATTTGTTCTTTTTATTATATTGTAGGAAAAGAATGAATAGAAAACGATTCAGGAGAAATTTATGTAACACGGAAGAAAAATTTGTGTAATATTAGTTTAATATTTAGTTAAAGAAACTTATTACTATTAATATTTATT

mRNA sequence

GTCTCCTGTCTCCGGTCTCTTCATTTCTGTTTCTGTCAATCCTCGTCTTCTCCAGCCGATACAGAACAGACGATTGAGCTCCACAGCGAATCAATGGCGGGAAGGACAGTGTTGAAGGAGAAGAGCAGGGCAGCAAGCTTCTTCTCCGCGACATTAGTGCCTTGGTCAGTCTCTCTATGGTTCGAAATTCTCTTCGACCGGCGCTTCGAGCTGCTCTACGTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTGTTTCCAAGGATCCTCTCTTAGTCAACACCTCCGTCTCTCTCCTTCATTCCACTATCACCTCTGCTTCAGTGCTGTTTGTTTTGGTGAATCGGTGGCTGAGTTATGGTTCGGAGGGGATGTTTGAGCATTCACAATTGTTTGGAGGAACATGGCCGTGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCGTATGATCAGTGGGATATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCGATCTTAGTTCATCATCTGGTTCTTCTCATTTGCTTTACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGATGCATTCTATTTTTCTCCATGTAAGGCGATTACGAAGGATGGCAGGTGTTCGTGACGCTAAGAGTGTTATCGTTAAAGTCGAATGGATTCTCAACTGGCTAACATTCGTTTTCGCAAGGTTTGTTCCACACATTCTCATTACTGCGAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCATCGAGCTGCCACTTGCACTGTCTGGGATGGCTGGCATGAACCTGCTGAATGCTTTGCTTGGCATTGATCTCTTAAACGCCGTAAGGAAAGAGAGTAATTACCAGAAAACTGATCAATCTCATCATGAATGAAGGAGGACCAACTTTGGTGGAAATTGTATTTGTTCTTTTTATTATATTGTAGGAAAAGAATGAATAGAAAACGATTCAGGAGAAATTTATGTAACACGGAAGAAAAATTTGTGTAATATTAGTTTAATATTTAGTTAAAGAAACTTATTACTATTAATATTTATT

Coding sequence (CDS)

ATGGCGGGAAGGACAGTGTTGAAGGAGAAGAGCAGGGCAGCAAGCTTCTTCTCCGCGACATTAGTGCCTTGGTCAGTCTCTCTATGGTTCGAAATTCTCTTCGACCGGCGCTTCGAGCTGCTCTACGTCGTATTCGGAGCTCTGTTCTACCAATCCGCCAATTCGGCCATTCGATTTCTTGTTTCCAAGGATCCTCTCTTAGTCAACACCTCCGTCTCTCTCCTTCATTCCACTATCACCTCTGCTTCAGTGCTGTTTGTTTTGGTGAATCGGTGGCTGAGTTATGGTTCGGAGGGGATGTTTGAGCATTCACAATTGTTTGGAGGAACATGGCCGTGGGCTTATGCAGCTTTGTGCTTCTCATGTGGTTATTTTGCGTATGATCAGTGGGATATGCTGCAATACCGATTATACAGTGGCTGGATCCCTGCGATCTTAGTTCATCATCTGGTTCTTCTCATTTGCTTTACGCTTGCTTTGTATAGGAATGTCACCATCAATTATCTCATTCTCACTCTCATTTGCGAGATGCATTCTATTTTTCTCCATGTAAGGCGATTACGAAGGATGGCAGGTGTTCGTGACGCTAAGAGTGTTATCGTTAAAGTCGAATGGATTCTCAACTGGCTAACATTCGTTTTCGCAAGGTTTGTTCCACACATTCTCATTACTGCGAAGCTCATCATGGATGCTTCCAAGTTTGATAAAGGCATCGAGCTGCCACTTGCACTGTCTGGGATGGCTGGCATGAACCTGCTGAATGCTTTGCTTGGCATTGATCTCTTAAACGCCGTAAGGAAAGAGAGTAATTACCAGAAAACTGATCAATCTCATCATGAATGA

Protein sequence

MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFLVSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGMFEHSQLFGGTWPWAYAALCFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSIFLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIELPLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE
Homology
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BLAST of CcUC08G149760 vs. NCBI nr
Match: XP_038884583.1 (TLC domain-containing protein 2 [Benincasa hispida])

HSP 1 Score: 523.1 bits (1346), Expect = 1.5e-144
Identity = 270/280 (96.43%), Postives = 273/280 (97.50%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGRTVLKEK RA SFFSATLV WSVSL FEILFDRRFELLYVVFGALFYQSANSAIRFL
Sbjct: 1   MAGRTVLKEKRRAGSFFSATLVLWSVSLCFEILFDRRFELLYVVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGMFEHSQLFGGTWPWAYAALCF 120
           VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEG+FEHSQLFGGTWPWAYAALCF
Sbjct: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGIFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI 180
           SCGYFAYDQWDMLQY LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI
Sbjct: 121 SCGYFAYDQWDMLQYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI 180

Query: 181 FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL 240
           FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL
Sbjct: 181 FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL 240

Query: 241 PLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           PLALSGMAGMNLLNALLG+DLL+AVRKES YQKTD SHHE
Sbjct: 241 PLALSGMAGMNLLNALLGMDLLSAVRKESYYQKTDHSHHE 280

[Close]
BLAST of CcUC08G149760 vs. NCBI nr
Match: XP_008466713.1 (PREDICTED: TLC domain-containing protein 2 [Cucumis melo])

HSP 1 Score: 507.3 bits (1305), Expect = 8.5e-140
Identity = 258/282 (91.49%), Postives = 269/282 (95.39%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGRT+LKEKSRA SFFSATL+ WSVSLWFEILFDRRF LLYVVFGALFYQSANS+IR L
Sbjct: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSY--GSEGMFEHSQLFGGTWPWAYAAL 120
           VSKDPLLVNTSVSLLHS +TSASVLFVLVNRWLSY   SEGMFEHSQLFGGTWPWAYAAL
Sbjct: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CEMH
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGI 240
           SIFLHVRRLRRMAGVRDAKS+IVKVEWILNWLTFVFARFVPHILIT KLI+DA KFDKG+
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240

Query: 241 ELPLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           ELPLALSGM GMNLLNALLGIDLLNAVRKESNY+KTD +HHE
Sbjct: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282

[Close]
BLAST of CcUC08G149760 vs. NCBI nr
Match: XP_004150440.1 (TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical protein Csa_018230 [Cucumis sativus])

HSP 1 Score: 506.9 bits (1304), Expect = 1.1e-139
Identity = 259/282 (91.84%), Postives = 271/282 (96.10%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGRT+LKEKSRA SFFSATL+ WSVSLWFEILFDRRF LLYVVFGALFYQSANS+IR L
Sbjct: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSY--GSEGMFEHSQLFGGTWPWAYAAL 120
           +SKDPLLVNTSVSLLHS ITSASVLFVLVNRWLSY  GSEGMFEHSQLFGGTWPWA+AAL
Sbjct: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120

Query: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICEMH
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGI 240
           SIFLHVRRLRRMAGVRDAKS+IVKVEWILNWLTFVFARFVPHILIT KLI+DASKFDKG+
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGV 240

Query: 241 ELPLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           ELPLALSGMAGMNLLNALLGIDLLNAV+KESNY+KTD +HHE
Sbjct: 241 ELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE 282

[Close]
BLAST of CcUC08G149760 vs. NCBI nr
Match: XP_022939854.1 (TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-containing protein 2, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016488.1 TLC domain-containing protein 2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 503.8 bits (1296), Expect = 9.4e-139
Identity = 253/280 (90.36%), Postives = 265/280 (94.64%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGRTVLKEKSRA SFFSATLV W+VSLWFEILFDRRFELLY+VFGALFYQSANSAIRFL
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGMFEHSQLFGGTWPWAYAALCF 120
           +SK+PL+VNT+VSLLHS ITSASVLFVL NRWLS+GS+GMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGSDGMFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI 180
           SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE+HSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL 240
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF FARFVPHILITAKLIMDASKFDKG+EL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFTFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 241 PLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           PLAL GMA MNLLN  LGIDL NAV+KESNYQK D  HHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHHE 280

[Close]
BLAST of CcUC08G149760 vs. NCBI nr
Match: XP_023550889.1 (TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 502.7 bits (1293), Expect = 2.1e-138
Identity = 252/280 (90.00%), Postives = 267/280 (95.36%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGRT+LKEKSRA SFFSATLV W+VSLWFEILFDRRFELLY+VFGALFYQSANSAIRFL
Sbjct: 1   MAGRTMLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGMFEHSQLFGGTWPWAYAALCF 120
           +SK+PL+VNT+VSLLHS ITSASVLFVLVNRWLS+GS+GMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLVNRWLSHGSDGMFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI 180
           SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE+HSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL 240
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILITAKLIMDASKFDKG+EL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 241 PLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           PLAL GMA MNLLN  LGIDL NAV+KESNYQK D  H+E
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHNE 280

[Close]
BLAST of CcUC08G149760 vs. ExPASy Swiss-Prot
Match: A8WGS4 (TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 8.0e-08
Identity = 56/207 (27.05%), Postives = 106/207 (51.21%), Query Frame = 0 

Query: 69  NTSVSLLHSTITSA-SVLFVLVNRWLSYGSEGMFEHSQLFGGTWPWAYAALCFSCGYFAY 128
           N S S +HS IT   SVL   ++  +   +E + E   +F      ++A +  S GYF Y
Sbjct: 42  NISTSFVHSLITGVWSVLCFCMHPQM---AEDLIETHSVF------SHALVSVSIGYFIY 101

Query: 129 DQWDM-LQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSIFLHVRR 188
           D  DM +  ++   W   +L HH+V++ CF +++     + + ++ L+ E++S+FLH+R+
Sbjct: 102 DFLDMVINQKIIHSW--ELLFHHVVVITCFGISVLTCRYVGFAVVALLVEINSVFLHLRQ 161

Query: 189 LRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIELPLALSG 248
           + RMA +  AKS   +V  ++N  T+V  R      +T  L+++           +   G
Sbjct: 162 VLRMANL--AKSTFYRVNSMINLGTYVVFRINTLAWMTRWLVLNRDLIPL-FSYTIGSVG 221

Query: 249 MAGMNLLNALLGIDLLNAVRKESNYQK 274
           +A M  +N +L   L+ +   +++ +K
Sbjct: 222 LAIMTAMNIVLFYRLMRSDFMKASREK 234

[Close]
BLAST of CcUC08G149760 vs. ExPASy TrEMBL
Match: A0A1S3CRX5 (TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=1)

HSP 1 Score: 507.3 bits (1305), Expect = 4.1e-140
Identity = 258/282 (91.49%), Postives = 269/282 (95.39%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGRT+LKEKSRA SFFSATL+ WSVSLWFEILFDRRF LLYVVFGALFYQSANS+IR L
Sbjct: 1   MAGRTLLKEKSRAGSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRVL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSY--GSEGMFEHSQLFGGTWPWAYAAL 120
           VSKDPLLVNTSVSLLHS +TSASVLFVLVNRWLSY   SEGMFEHSQLFGGTWPWAYAAL
Sbjct: 61  VSKDPLLVNTSVSLLHSIVTSASVLFVLVNRWLSYDSSSEGMFEHSQLFGGTWPWAYAAL 120

Query: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTL+CEMH
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLVCEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGI 240
           SIFLHVRRLRRMAGVRDAKS+IVKVEWILNWLTFVFARFVPHILIT KLI+DA KFDKG+
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDAYKFDKGV 240

Query: 241 ELPLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           ELPLALSGM GMNLLNALLGIDLLNAVRKESNY+KTD +HHE
Sbjct: 241 ELPLALSGMTGMNLLNALLGIDLLNAVRKESNYKKTDDTHHE 282

[Close]
BLAST of CcUC08G149760 vs. ExPASy TrEMBL
Match: A0A0A0KH54 (TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 5.4e-140
Identity = 259/282 (91.84%), Postives = 271/282 (96.10%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGRT+LKEKSRA SFFSATL+ WSVSLWFEILFDRRF LLYVVFGALFYQSANS+IR L
Sbjct: 1   MAGRTLLKEKSRAWSFFSATLLLWSVSLWFEILFDRRFRLLYVVFGALFYQSANSSIRLL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSY--GSEGMFEHSQLFGGTWPWAYAAL 120
           +SKDPLLVNTSVSLLHS ITSASVLFVLVNRWLSY  GSEGMFEHSQLFGGTWPWA+AAL
Sbjct: 61  LSKDPLLVNTSVSLLHSIITSASVLFVLVNRWLSYGSGSEGMFEHSQLFGGTWPWAFAAL 120

Query: 121 CFSCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMH 180
           CFSCGYFAYDQWDML+Y LYSGWIPAILVHHLVLLICFTLALYRNVTINYL LTLICEMH
Sbjct: 121 CFSCGYFAYDQWDMLRYGLYSGWIPAILVHHLVLLICFTLALYRNVTINYLNLTLICEMH 180

Query: 181 SIFLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGI 240
           SIFLHVRRLRRMAGVRDAKS+IVKVEWILNWLTFVFARFVPHILIT KLI+DASKFDKG+
Sbjct: 181 SIFLHVRRLRRMAGVRDAKSIIVKVEWILNWLTFVFARFVPHILITVKLIIDASKFDKGV 240

Query: 241 ELPLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           ELPLALSGMAGMNLLNALLGIDLLNAV+KESNY+KTD +HHE
Sbjct: 241 ELPLALSGMAGMNLLNALLGIDLLNAVKKESNYKKTDDTHHE 282

[Close]
BLAST of CcUC08G149760 vs. ExPASy TrEMBL
Match: A0A6J1FID3 (TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE=4 SV=1)

HSP 1 Score: 503.8 bits (1296), Expect = 4.5e-139
Identity = 253/280 (90.36%), Postives = 265/280 (94.64%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGRTVLKEKSRA SFFSATLV W+VSLWFEILFDRRFELLY+VFGALFYQSANSAIRFL
Sbjct: 1   MAGRTVLKEKSRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGMFEHSQLFGGTWPWAYAALCF 120
           +SK+PL+VNT+VSLLHS ITSASVLFVL NRWLS+GS+GMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFVLANRWLSHGSDGMFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI 180
           SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE+HSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL 240
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF FARFVPHILITAKLIMDASKFDKG+EL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFTFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 241 PLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           PLAL GMA MNLLN  LGIDL NAV+KESNYQK D  HHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHLHHE 280

[Close]
BLAST of CcUC08G149760 vs. ExPASy TrEMBL
Match: A0A6J1K0R9 (TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.3e-138
Identity = 251/280 (89.64%), Postives = 266/280 (95.00%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGRTVLKE+SRA SFFSATLV W+VSLWFEILFDRRFELLY+VFGALFYQSANSAIRFL
Sbjct: 1   MAGRTVLKEESRAGSFFSATLVLWTVSLWFEILFDRRFELLYLVFGALFYQSANSAIRFL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGMFEHSQLFGGTWPWAYAALCF 120
           +SK+PL+VNT+VSLLHS ITSASVLF+LVNRWLS+G +GMFEHSQLFGGTWPWAYAALCF
Sbjct: 61  ISKEPLVVNTAVSLLHSIITSASVLFILVNRWLSHGLDGMFEHSQLFGGTWPWAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI 180
           SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE+HSI
Sbjct: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL 240
           FLHVRRLRRMAGVRDA+S IVKVEW LNWLTF+FARFVPHILITAKLIMDASKFDKG+EL
Sbjct: 181 FLHVRRLRRMAGVRDAESFIVKVEWTLNWLTFIFARFVPHILITAKLIMDASKFDKGVEL 240

Query: 241 PLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           PLAL GMA MNLLN  LGIDL NAV+KESNYQK D  HHE
Sbjct: 241 PLALFGMAAMNLLNVFLGIDLFNAVKKESNYQKNDHFHHE 280

[Close]
BLAST of CcUC08G149760 vs. ExPASy TrEMBL
Match: A0A6J1CKF5 (TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011955 PE=4 SV=1)

HSP 1 Score: 471.5 bits (1212), Expect = 2.5e-129
Identity = 241/280 (86.07%), Postives = 256/280 (91.43%), Query Frame = 0 

Query: 1   MAGRTVLKEKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFL 60
           MAGR V KEKSRA SFFSATLV W VS+WFEILF RR ELLYVVFGALFYQSAN  +R L
Sbjct: 1   MAGRRVPKEKSRAGSFFSATLVLWIVSIWFEILFYRRSELLYVVFGALFYQSANWTVRAL 60

Query: 61  VSKDPLLVNTSVSLLHSTITSASVLFVLVNRWLSYGSEGMFEHSQLFGGTWPWAYAALCF 120
           VSKDPL VNTSVSLLHSTITSASVLF+LV++WLSYGS GMFEHSQL GGTW  AYAALCF
Sbjct: 61  VSKDPLFVNTSVSLLHSTITSASVLFILVSQWLSYGSHGMFEHSQLVGGTWSGAYAALCF 120

Query: 121 SCGYFAYDQWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSI 180
           SCGYFAYDQWDML Y+LYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICE+HSI
Sbjct: 121 SCGYFAYDQWDMLLYQLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICELHSI 180

Query: 181 FLHVRRLRRMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIEL 240
           FLHVRRLRRMAGVRDAKS++VKVEWILNWLTFVFAR VPHILITAKL++DASKFD+G+EL
Sbjct: 181 FLHVRRLRRMAGVRDAKSIVVKVEWILNWLTFVFARVVPHILITAKLVVDASKFDRGVEL 240

Query: 241 PLALSGMAGMNLLNALLGIDLLNAVRKESNYQKTDQSHHE 281
           PLALSGMAGMNLLNA LGIDL+NAV+KES YQK D    E
Sbjct: 241 PLALSGMAGMNLLNAFLGIDLINAVKKESKYQKRDHPRRE 280

[Close]
BLAST of CcUC08G149760 vs. TAIR 10
Match: AT1G21790.1 (TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein )

HSP 1 Score: 370.2 bits (949), Expect = 1.5e-102
Identity = 183/269 (68.03%), Postives = 224/269 (83.27%), Query Frame = 0 

Query: 9   EKSRAASFFSATLVPWSVSLWFEILFDRRFELLYVVFGALFYQSANSAIRFLVSKDPLLV 68
           +K+ A  FF ATL+ W VS+ FEI F+ R ELL+V+ G  F+Q  N  +R  +S+DP+ V
Sbjct: 12  KKNGAGQFFLATLLLWLVSVVFEIAFNLRTELLWVICGGCFFQLMNWVVRSWISRDPIFV 71

Query: 69  NTSVSLLHSTITSASVLFVLVNRWLSYGSEGMFEHSQLFGGTWPWAYAALCFSCGYFAYD 128
           NTSVSLLHS ITSASV+F+L+N+ L+ G + MF+HS+L GGTW WAY ALCFSCGYFAYD
Sbjct: 72  NTSVSLLHSIITSASVVFILLNQCLAKGLDEMFDHSELVGGTWKWAYPALCFSCGYFAYD 131

Query: 129 QWDMLQYRLYSGWIPAILVHHLVLLICFTLALYRNVTINYLILTLICEMHSIFLHVRRLR 188
           QWDMLQYRLYSG IP+ILVHHLVLL+CFTLALYRNVTINYLILTLICEMHSIFLHVR+LR
Sbjct: 132 QWDMLQYRLYSGLIPSILVHHLVLLVCFTLALYRNVTINYLILTLICEMHSIFLHVRKLR 191

Query: 189 RMAGVRDAKSVIVKVEWILNWLTFVFARFVPHILITAKLIMDASKFDKGIELPLALSGMA 248
           RMAG+RD+ + +VK+EW+LNW  FVFAR +PHILIT KLI DA KF KG+ELPLALSGMA
Sbjct: 192 RMAGIRDSNTALVKLEWVLNWTAFVFARCIPHILITIKLIKDAHKFGKGVELPLALSGMA 251

Query: 249 GMNLLNALLGIDLLNAVRKESNYQKTDQS 278
           GMN+LN  LG+DL +A R+E ++++  ++
Sbjct: 252 GMNILNVGLGLDLFHAFRRERSHRRNQEN 280

The following BLAST results are available for this feature:
BLAST of CcUC08G149760 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_038884583.11.5e-14496.43TLC domain-containing protein 2 [Benincasa hispida][more]
XP_008466713.18.5e-14091.49PREDICTED: TLC domain-containing protein 2 [Cucumis melo][more]
XP_004150440.11.1e-13991.84TLC domain-containing protein 2 [Cucumis sativus] >KGN47727.1 hypothetical prote... [more]
XP_022939854.19.4e-13990.36TLC domain-containing protein 2 [Cucurbita moschata] >KAG6578966.1 TLC domain-co... [more]
XP_023550889.12.1e-13890.00TLC domain-containing protein 2 [Cucurbita pepo subsp. pepo][more]
BLAST of CcUC08G149760 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
A8WGS48.0e-0827.05TLC domain-containing protein 2 OS=Danio rerio OX=7955 GN=tlcd2 PE=2 SV=1[more]
BLAST of CcUC08G149760 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A1S3CRX54.1e-14091.49TLC domain-containing protein 2 OS=Cucumis melo OX=3656 GN=LOC103504058 PE=4 SV=... [more]
A0A0A0KH545.4e-14091.84TLC domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G385110 PE=4 SV... [more]
A0A6J1FID34.5e-13990.36TLC domain-containing protein 2 OS=Cucurbita moschata OX=3662 GN=LOC111445599 PE... [more]
A0A6J1K0R91.3e-13889.64TLC domain-containing protein 2 OS=Cucurbita maxima OX=3661 GN=LOC111489133 PE=4... [more]
A0A6J1CKF52.5e-12986.07TLC domain-containing protein 2 isoform X2 OS=Momordica charantia OX=3673 GN=LOC... [more]
BLAST of CcUC08G149760 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G21790.11.5e-10268.03TRAM, LAG1 and CLN8 (TLC) lipid-sensing domain containing protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006634TRAM/LAG1/CLN8 homology domainSMARTSM00724lag1_27coord: 62..267
e-value: 8.2E-32
score: 121.7
IPR006634TRAM/LAG1/CLN8 homology domainPFAMPF03798TRAM_LAG1_CLN8coord: 69..255
e-value: 3.1E-18
score: 66.2
IPR006634TRAM/LAG1/CLN8 homology domainPROSITEPS50922TLCcoord: 62..270
score: 14.182445
NoneNo IPR availablePANTHERPTHR13439:SF4TLC DOMAIN-CONTAINING PROTEIN FLD-1coord: 16..277
NoneNo IPR availablePANTHERPTHR13439CT120 PROTEINcoord: 16..277

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G149760.1CcUC08G149760.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0071709 membrane assembly
biological_process GO:0055091 phospholipid homeostasis
biological_process GO:0007009 plasma membrane organization
biological_process GO:0097035 regulation of membrane lipid distribution
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0005886 plasma membrane