CcUC08G149540 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G149540
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	selenoprotein K
Location	CicolChr08: 17128208 .. 17131065 (-)
RNA-Seq Expression	CcUC08G149540
Synteny	CcUC08G149540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGTAGCTTAGCCAATCAAAATTCGCAAAAATCATAGTAAAATAGGAAGCGGAAATTAGTCGATCCAGCTTTTAGAATATCGCCTCTTTCGTTTCGACCCCGAGAAAGCTCTGGAAAGTCTCCCATGGCGTACGTTGAACGAGGTTCTATCTCAATTTCCATTTGGTTCTATTTCGATTTCACTGCTAAGAGATTGGTTGATCACTTTTGGATTAGGAACTAGTCTAGATTTTGTTTCCCTGGTTGATCACTTTTGGTTCTCCTCTTGTTTTCATATATGATCCTTGTGTGTTTGGGTTGTACATGTATTATCTTTGAATCCTTTCCCTATTTCCTTGGTATTATGCATTTCGTGATTCTGATTTCGATTTTGGGCTTAATAGGTTAGATCCAATAAAATTTTCTGCAAGGCGTGGTATTTCTGAGGAACAATTTTCTGATTGCATATCTCTTGGTCTAATTTTTCTAACCATTTGTCAGAAACTTCCTGAATTTTATGTTATCATATATCAAATGAACCAAATGGAAAAATCGTACACAAAAGATAAAACCACAGGAATGGAAGTAAACCTAGGTCACGAATTTAATAATGAAGAGGGTAAAACCCCTCGAATTCGGGTTAAAGAGAGAGCGATGTTCTACGACCTAATGGAATGACAGGGAAAATAGAGAAATGCGGCGATGAGGTCGGGAAATTTCTTGCCATTATTTGATAAGTTAGATAAGATACATACCTTAACGGTCTTATTATGTTGTATGAGTTGAATCCCTATTTCCTTACCCTAAACTTCAAATTTGGTGGTGCCATTTTTACAAGCTGTTACTGACACTTTAAGGATGAAGGGATTTGGTTATTTCTTTGAGTGTGTGGTTGAAGTGACAGTTTTTCTAATTCCTCCTCTCTGTTTCCAGTTCTACACTGTGTTTATCATCTCTATGGTTTTAGCGAAATGATCCGAGGATAAAAATGTCAGGAAAATGGCTCTTCACTTAAAAAGTTATCACTCAATTAAGAGGATTTTTTTGTTTCCTCCTTATGAAATGCAACTGCTCAATATAAAATATAAAATTGTATTGTAGATTGCAGTTCATAGTGGAAAACATAAATATCAGTGCTTGTGAAAATTTGATGAATAAACAGGTATATTTTCTTTTAAACCTGTTTTATTTGCTTTATGTCTGCCTGGCTCTTCAGTATTAGTGATCAATATTAGGTCCATGTTCTAAATCAAAGTGTAGAGGTATTCATACCCGCGTTTTGTTAACCACTCCCTGATTGCGATAAACACCTTGTTAAATTTTGTGAAATTACCATAGCCATATAGAGAGAAGATATTATGAGTTTTAAATCTTAACGAGCATCATAACTTTGTTTTTCATAACTTTATATTATTCCCATGGTTTAGCAGTTTTTATGCACTTTCTTCAAATGCTGGTTAAGAAATTGATGTTTTATGGAGTCTTCTTTATCATACACCCTTCAAAATGTGTCGACCTAAGCATGTTATTAGGAAGAGTGTAATTTTATCAACACGTGGTTGGAGTTTTTTGGTTGTCTGTTTAGCAGGATGATCTAGATCTGTAGATTTCTTAGATTGTAACTAGGCTTTGGTATTCCTTTTGGTTGCTTGAACTGGTGAAATCTCTCACATTTAATCATGGGGGTTGTTCATGTTTCCGAAGCATAAATTGATTCTAAATTTGCCGGTATTAAACAGCTCTGTGTAATTTCCTACTGCACTCTGCTACCTGTCTCCTGGTACACCCGTTTTACATCTTTGTCAGAGTGCTTTGATAGAAGAACCGTTTGTGTGTTAAGTTATCGAGTATTGATCTGTGTTTTTTTTCACTTTCGTTTGCTTATCATCTTGTCTACATTAATGACCTGTTTCAACTCTTCTCTACTTACTGCTGTCTGTGTGACATTGTTTTTTCAATTATCTATTTCAATTGATTGTATGTTCAAAAGTTTTAAGAGGAGTTAAATTCCCTTCACGTTGCACAGTGTCCCATCATATCTGAATTGCCATCTTCAGATTGGTAAACTTGGGGCTATTCTTATGTGGGTTGGACATGTTACTATTCTTGAATACTTGGAACTCTGAAGTTGGATGCTTCCGTGTTATTGATTTTGTTGAGCATGTACTGACCAACTATGCATTTGCGGTGATATCTTGTAGGTGTAGTGAAATCTCAAAGATCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATCATAAACGTTATCGGTGTGTTTTTTACCACATTGTTCTCGGTAAGTTGCTTATTGCGTTGAAAGAAAACGTTAGCATTCAGAACCGTCATGTTGGGAAGGAAGCTAAATTCCCATGCTTCTTTGTAGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCTGGGAAGAAATGGGACGGTGGTGGCCCCGGAGGTCCTGGGTCTGGCCCCTATGGTGGTCGTCCCCGTGGTCCACCTCGCGGTCTAGACAATGTTCGAGGGATTGATCACAGTATGTTGAATGCTGATTTTTGAACTTATTTTCTCCATGCTTTCATTTGATTTATTTACTGATATGTGATCTGAATTTGATGGCAATCAGGTTCATTACCTGCCTGTGGCTCGTGCTGTGGCTAAGTTTTGGCTGCTTCCATGGTGCGTCTACATATAGCTGTCTCTCTAAACAATGTTATTTCAATTTAAAATTGTGGGACGTGCTGTAAATGTTGATGGAATGTTAACTGCGACTATATATTATTATATTATATGCCAAAGAAAAACGTAAATCCTTCATAGATCAACAAGGTTCTCTCATCATCTCATCTTTCGGCATACTTTTACATATAAT

mRNA sequence

ATGACGAAGCGGAAATTAGTCGATCCAGCTTTTAGAATATCGCCTCTTTCGTTTCGACCCCGAGAAAGCTCTGGAAAGTCTCCCATGGCGTACGTTGAACGAGGTGTAGTGAAATCTCAAAGATCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATCATAAACGTTATCGGTGTGTTTTTTACCACATTGTTCTCGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCTGGGAAGAAATGGGACGGTGGTGGCCCCGGAGGTCCTGGGTCTGGCCCCTATGGTGGTCGTCCCCGTGGTCCACCTCGCGGTCTAGACAATGTTCGAGGGATTGATCACAGTTCATTACCTGCCTGTGGCTCGTGCTGTGGCTAAGTTTTGGCTGCTTCCATGGTGCGTCTACATATAGCTGTCTCTCTAAACAATGTTATTTCAATTTAAAATTGTGGGACGTGCTGTAAATGTTGATGGAATGTTAACTGCGACTATATATTATTATATTATATGCCAAAGAAAAACGTAAATCCTTCATAGATCAACAAGGTTCTCTCATCATCTCATCTTTCGGCATACTTTTACATATAAT

Coding sequence (CDS)

ATGACGAAGCGGAAATTAGTCGATCCAGCTTTTAGAATATCGCCTCTTTCGTTTCGACCCCGAGAAAGCTCTGGAAAGTCTCCCATGGCGTACGTTGAACGAGGTGTAGTGAAATCTCAAAGATCATTTTGGCGTCTCAAAACTATAACTGATTTCTTTTGGGCCATCATAAACGTTATCGGTGTGTTTTTTACCACATTGTTCTCGATGGAAAAATCAGAGGCATATAGAAAAGGATCCGGTTCTGGGAAGAAATGGGACGGTGGTGGCCCCGGAGGTCCTGGGTCTGGCCCCTATGGTGGTCGTCCCCGTGGTCCACCTCGCGGTCTAGACAATGTTCGAGGGATTGATCACAGTTCATTACCTGCCTGTGGCTCGTGCTGTGGCTAA

Protein sequence

MTKRKLVDPAFRISPLSFRPRESSGKSPMAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG

Homology

[Close]

BLAST of CcUC08G149540 vs. NCBI nr
Match: XP_004140863.1 (selenoprotein K isoform X1 [Cucumis sativus])

HSP 1 Score: 208.4 bits (529), Expect = 3.7e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAI+NVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CcUC08G149540 vs. NCBI nr
Match: XP_008445670.1 (PREDICTED: selenoprotein K [Cucumis melo])

HSP 1 Score: 208.4 bits (529), Expect = 3.7e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAIIN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CcUC08G149540 vs. NCBI nr
Match: XP_022964558.1 (selenoprotein K-like [Cucurbita moschata] >XP_022964567.1 selenoprotein K-like [Cucurbita moschata] >XP_022989819.1 selenoprotein K [Cucurbita maxima] >XP_023516420.1 selenoprotein K-like [Cucurbita pepo subsp. pepo] >KAG6602082.1 Selenoprotein K, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 208.0 bits (528), Expect = 4.9e-50
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CcUC08G149540 vs. NCBI nr
Match: XP_022993311.1 (selenoprotein K-like [Cucurbita maxima])

HSP 1 Score: 205.7 bits (522), Expect = 2.4e-49
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CcUC08G149540 vs. NCBI nr
Match: XP_022938384.1 (selenoprotein K-like [Cucurbita moschata] >XP_023551149.1 selenoprotein K-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 203.4 bits (516), Expect = 1.2e-48
Identity = 99/102 (97.06%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPY-GGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPY GGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 102

[Close]

BLAST of CcUC08G149540 vs. ExPASy Swiss-Prot
Match: Q6S9C4 (Selenoprotein K OS=Chinchilla lanigera OX=34839 GN=SELENOK PE=3 SV=3)

HSP 1 Score: 47.0 bits (110), Expect = 1.9e-04
Identity = 35/98 (35.71%), Postives = 44/98 (44.90%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSF--WRLKTITDFFWAIINVIGVFFTTLF--SMEKSEAYRKGSGSGK 88
           M Y+  G V   RS   WRL  ITDFFW I   + +FF TL    ++K   YR  S S +
Sbjct: 1   MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKGRGYRNSSDS-R 60

Query: 89  KWDGGGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLP 123
             DG GP           P  PPR +  +  +   S P
Sbjct: 61  YDDGRGP-----------PGNPPRRMGRISHLHGPSPP 86

[Close]

BLAST of CcUC08G149540 vs. ExPASy Swiss-Prot
Match: Q9Y6D0 (Selenoprotein K OS=Homo sapiens OX=9606 GN=SELENOK PE=1 SV=3)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 32/89 (35.96%), Postives = 44/89 (49.44%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSF--WRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW 88
           M Y+  G V   RS   WRL  ITDFFW I   + +FF TL   +  +    G+ S  ++
Sbjct: 1   MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKRRSYGNSSDSRY 60

Query: 89  DGGGPGGPGSGPYGGRPRGPPRGLDNVRG 116
           D       G GP G  PR   R ++++RG
Sbjct: 61  D------DGRGPPGNPPRRMGR-INHLRG 82

[Close]

BLAST of CcUC08G149540 vs. ExPASy Swiss-Prot
Match: Q4R8M1 (Selenoprotein K OS=Macaca fascicularis OX=9541 GN=SELENOK PE=3 SV=3)

HSP 1 Score: 46.6 bits (109), Expect = 2.5e-04
Identity = 32/89 (35.96%), Postives = 44/89 (49.44%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSF--WRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW 88
           M Y+  G V   RS   WRL  ITDFFW I   + +FF TL   +  +    G+ S  ++
Sbjct: 1   MVYISNGQVLDSRSQSPWRLSLITDFFWGIAEFVVLFFKTLLQQDVKKRRSYGNSSDSRY 60

Query: 89  DGGGPGGPGSGPYGGRPRGPPRGLDNVRG 116
           D       G GP G  PR   R ++++RG
Sbjct: 61  D------DGRGPPGNPPRRMGR-INHLRG 82

[Close]

BLAST of CcUC08G149540 vs. ExPASy Swiss-Prot
Match: Q32PE3 (Selenoprotein K OS=Bos taurus OX=9913 GN=SELENOK PE=3 SV=3)

HSP 1 Score: 45.8 bits (107), Expect = 4.2e-04
Identity = 31/89 (34.83%), Postives = 43/89 (48.31%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSF--WRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW 88
           M Y+  G V   RS   WRL  ITDFFW I   + +FF TL   +  +    GS S  ++
Sbjct: 1   MVYISNGQVLDSRSQSPWRLSFITDFFWGIAEFVVLFFRTLLQQDVKKRRGYGSSSDSRY 60

Query: 89  DGGGPGGPGSGPYGGRPRGPPRGLDNVRG 116
           D       G GP G  PR     +++++G
Sbjct: 61  D------DGRGPPGNPPRRRMGRINHLQG 83

[Close]

BLAST of CcUC08G149540 vs. ExPASy TrEMBL
Match: A0A0A0KDW6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040550 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.8e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAI+NVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CcUC08G149540 vs. ExPASy TrEMBL
Match: A0A1S3BE45 (selenoprotein K OS=Cucumis melo OX=3656 GN=LOC103488629 PE=4 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 1.8e-50
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAIIN+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIINIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CcUC08G149540 vs. ExPASy TrEMBL
Match: A0A6J1HI52 (selenoprotein K-like OS=Cucurbita moschata OX=3662 GN=LOC111464545 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CcUC08G149540 vs. ExPASy TrEMBL
Match: A0A6J1JQF6 (selenoprotein K OS=Cucurbita maxima OX=3661 GN=LOC111486892 PE=4 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 2.4e-50
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CcUC08G149540 vs. ExPASy TrEMBL
Match: A0A6J1JVZ4 (selenoprotein K-like OS=Cucurbita maxima OX=3661 GN=LOC111489356 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.2e-49
Identity = 98/101 (97.03%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 88
           MAYVERGVVKSQRSFWRLKTITDFFWAI+N+IGVFFTTLFSMEKSEAYRKGSGSGKKWDG
Sbjct: 1   MAYVERGVVKSQRSFWRLKTITDFFWAIVNIIGVFFTTLFSMEKSEAYRKGSGSGKKWDG 60

Query: 89  GGPGGPGSGPYGGRPRGPPRGLDNVRGIDHSSLPACGSCCG 130
           GGPGGPGSGPYGGRPRGPPR LDNVRGIDHSSLPACGSCCG
Sbjct: 61  GGPGGPGSGPYGGRPRGPPRSLDNVRGIDHSSLPACGSCCG 101

[Close]

BLAST of CcUC08G149540 vs. TAIR 10
Match: AT4G08230.1 (glycine-rich protein )

HSP 1 Score: 127.9 bits (320), Expect = 6.0e-30
Identity = 73/113 (64.60%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 29  MAYVERGVVKSQRSFWRLKTITDFFWAIINVIGVFFTTLFSMEKSEAYRKGSGSGKKW-- 88
           MAYVE GVVK++R  WRL+TI DFF +IIN+I VFF T+FSMEKS+AYRKGS   KKW  
Sbjct: 1   MAYVEGGVVKAKRPIWRLRTIKDFFLSIINLIQVFFVTMFSMEKSDAYRKGSKPNKKWGG 60

Query: 89  ---DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------DHSSLPACGSCCG 130
               GGG GG   G  GGR  GPPR GLDNVRG+      DH+SLPACGSCCG
Sbjct: 61  GMGGGGGGGGGSGGGGGGRGGGPPRGGLDNVRGLNDIRGADHNSLPACGSCCG 113

[Close]

BLAST of CcUC08G149540 vs. TAIR 10
Match: AT4G08230.2 (glycine-rich protein )

HSP 1 Score: 72.4 bits (176), Expect = 3.0e-13
Identity = 45/72 (62.50%), Postives = 48/72 (66.67%), Query Frame = 0


Query: 70  MEKSEAYRKGSGSGKKW-----DGGGPGGPGSGPYGGRPRGPPR-GLDNVRGI------D 129
           MEKS+AYRKGS   KKW      GGG GG   G  GGR  GPPR GLDNVRG+      D
Sbjct: 1   MEKSDAYRKGSKPNKKWGGGMGGGGGGGGGSGGGGGGRGGGPPRGGLDNVRGLNDIRGAD 60

The following BLAST results are available for this feature:

BLAST of CcUC08G149540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140863.1	3.7e-50	99.01	selenoprotein K isoform X1 [Cucumis sativus]	[more]
XP_008445670.1	3.7e-50	99.01	PREDICTED: selenoprotein K [Cucumis melo]	[more]
XP_022964558.1	4.9e-50	98.02	selenoprotein K-like [Cucurbita moschata] >XP_022964567.1 selenoprotein K-like [...	[more]
XP_022993311.1	2.4e-49	97.03	selenoprotein K-like [Cucurbita maxima]	[more]
XP_022938384.1	1.2e-48	97.06	selenoprotein K-like [Cucurbita moschata] >XP_023551149.1 selenoprotein K-like [...	[more]

BLAST of CcUC08G149540 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6S9C4	1.9e-04	35.71	Selenoprotein K OS=Chinchilla lanigera OX=34839 GN=SELENOK PE=3 SV=3	[more]
Q9Y6D0	2.5e-04	35.96	Selenoprotein K OS=Homo sapiens OX=9606 GN=SELENOK PE=1 SV=3	[more]
Q4R8M1	2.5e-04	35.96	Selenoprotein K OS=Macaca fascicularis OX=9541 GN=SELENOK PE=3 SV=3	[more]
Q32PE3	4.2e-04	34.83	Selenoprotein K OS=Bos taurus OX=9913 GN=SELENOK PE=3 SV=3	[more]

BLAST of CcUC08G149540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDW6	1.8e-50	99.01	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G040550 PE=4 SV=1	[more]
A0A1S3BE45	1.8e-50	99.01	selenoprotein K OS=Cucumis melo OX=3656 GN=LOC103488629 PE=4 SV=1	[more]
A0A6J1HI52	2.4e-50	98.02	selenoprotein K-like OS=Cucurbita moschata OX=3662 GN=LOC111464545 PE=4 SV=1	[more]
A0A6J1JQF6	2.4e-50	98.02	selenoprotein K OS=Cucurbita maxima OX=3661 GN=LOC111486892 PE=4 SV=1	[more]
A0A6J1JVZ4	1.2e-49	97.03	selenoprotein K-like OS=Cucurbita maxima OX=3661 GN=LOC111489356 PE=4 SV=1	[more]

BLAST of CcUC08G149540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G08230.1	6.0e-30	64.60	glycine-rich protein	[more]
AT4G08230.2	3.0e-13	62.50	glycine-rich protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR024491	Selenoprotein SelK/SelG	PFAM	PF10961	SelK_SelG	coord: 30..106 e-value: 1.5E-21 score: 76.9
IPR024491	Selenoprotein SelK/SelG	PANTHER	PTHR16875	SELENOPROTEIN K	coord: 29..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 77..119

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G149540.1	CcUC08G149540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006816	calcium ion transport
biological_process	GO:0032469	endoplasmic reticulum calcium ion homeostasis
cellular_component	GO:0005789	endoplasmic reticulum membrane
cellular_component	GO:0005794	Golgi apparatus
cellular_component	GO:0016021	integral component of membrane