CcUC08G148300 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTACCAAACTTTTGGAGTAGGTCTTGTTTTGTTCCACATGTAAATCATTCTATCTTGCTTCTGAAGCCACCCTTTTCATAACATAACAAACTCTCCCCCTTTTCTTTTTTCTCATTTGCTTACTGTCCATTACCCTTAACTACAACATAATCTTATCATTTGCTTCTCAGCATTCTTCATTTAATCACTTCTACCTTTTCCCTTCTCCACAACATGAGAGCCATTGGAAAATTTGTCGCTCTTCCTTTCTTATCAGGTTGTGCTTCTCGTTCTAGTGTCGCTACGAGTACATCCATTTCTACGACTCAAATCCGAGAGCTTAAAGAAGTAAACCCAAGTGTAGCAAGTAAGATCAATGATTTTCTTTCTCCCATATATTTTTCTTGTTTCCAAGTCCCTTTGGTTTGTTTTTTATTTCTTTCAATAAATAAGGGTTGGGTTATTTATTTATTGATTTTTTAGGAAGAGAAGAAAGTGAAAATAAAACTTCTGAAGTGAGAATGAAAAACCCTTCTGGTTTCTTATTTGTTCTGCCTAATATAACAAATGGAGTTCATAAGTTGGTCAGAAGCCTCAAAACTTTCTCCCAATTATTTGGTAAGGATAAATTTTCTTTTGTTTCCATAATTACATATTTGTTTGAATTATCATTTTTTAAATTAACTATCTTGAAATTTATGTGGCTTCTGAACAATTATAGGATTTGCCTTGAAATCAACCTGCTATAATGTGCTTCTCCATCCATAATGCAATATTATTTATGTTAATTGCAAGTTTATAATTATACTTCCAAAGGATAAAGAAACTCCATCATTTGGCCATTCTAAAGATATCTTGTCTAATGTTTCAAAATCCTCAATTATACTTTCAAGGAATTAAATTCTTTTATAAAATATCTCAACTAAAAAAACATTATTGAAAGACATTTTAAAAATTATTTTCCTATTATGTTAAACTTTTTGAAAGTTAAAAATATCCACCTTATCCAACTTAATTTTTGAAACTCAACCAATTATTCTTCCTAATGAAAAAAGATACAATCCACCCACTCAATATAGTATTGTTTTAAGAACATTTGATTTTTCACTCGATAAAATAAATACTCTCAACTTGGGATTTTCAATGATCCACTATAATATATACACCTACTGCATTGTGTAAACCCTTTCTCTCCTTACTCTTTGGGCACATTTAACCTTTTTTTTTTTTTTTTCCTTTTGCTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTAAAGCATAGATGTTACATGTGTTTGATAACAAGTTTGCTTTAGTAATTTTTTTTTTTATATATAGTTAAACTTATTAAATGATACTTTAACGACAATTTTCTTTGTTATATTATCTACTTTCTCATAGTATATTTAAAATCTAAAGCTAAATTTTAAAAACTAAAAAAAAGTAATTATTAAAAGTGTGTTTTTGTTTATTTTTCCTTTAGCAAAAAGAACTATTTTTATATAATTAGAATTTAATTTAGAATTTACATGTTTACTAAAAGAAGATGAAAATCATGTAAGAAATTGTTAGAGGAAAGAATAACAATTTTAACTAGAACGTAAACAATTATCAAACATAGATTATTTGTTTAGACAAAGTAATAGTAGATACTTAAATAAAGTAATAGTAGATACTTAAATTGTTTCTTTTTAGTAAAAACTCCTTCCTAAACAGGTATTTTCTAATTAATCTTTCTTTTACCCAATGCTTTATTGAAAACTTTCATATTTAATTAGTAAAATTGAAACTTATAAAATTTAAGAATTAAAAATAAGAAGAATATTTTGTACACTTCACTTAATGGTATATTTACCTTAAAAGCAATATTAGTATAGTGTGGAGTTCTATATATATATATATATAGAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAAGGTAGCTGGTCTACCATTTCTTATCTAAATGAAATAACCCCTTCCCAAATTGCGACAATAAATCCCAAGTAATAAACAAAAATAAGTCCCACCCACCAACTAATTTTACCTACCATTCAAAATAACAAAAAACCCCTTCAAATAATCACATGAGCATAGAAAAAAGTACTTAATAGATGAATATCATTGTATAATGATTCTTATCTACAACTATTGAAATACGTTCATATCAACTCATAGATATGTTCATCACACTTACCTGATTGTCATTTTCTTTTGAGACAACTATAAATAAAGCAATCAAGCTCAAAATATTAATAAATATAATACAATATAAAAAAATTTGCAGATATTACAAAATTTAAATCCAACTCTAAAAAATCTACTAGTGATAGACTATATCACTGATACGAGTCTATCAATAATAGAGTCTATCACTAATAGACTTTTCTACATTACAATTATCCTTTTATTTTTTTATGCTTTTTTATCCATGAACATGTATTCTTAAGCAAAAGAAAGCGGAAATTAAACTAAATTTTGATTGCTCTTGTGAAAAAAAAAACCCTAGTTTTGAGAAAAGATGAAGAAGTAGAGGAAGTGGAAATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACACATTGGATTGGATGGCTCTACAACTACAAACCCTAATATTAAGGGTAATCATTGGGAAAATCTCAATAACTTTGTTCCTTCTGAGTTTCTTAATTCTTTTCCTTCCATTTCTTTAAGGCAATTTGAACTTTCAATGGCTGCTCAAGCACAATCTTCTCTTCTAGCGACATGATTTTATTCTTTCTCATTTTGCTTTCTTAATTCTTCCTTTTCTTTTTTTTCCCTTCAAAAAGCTTATACTTTGTGGAGGTAGTTGTTGATGATTTAAGGATCCCCTTCTCCTTATTAAACAATGGTGGTAAGGAGAAAAAAAATGATGTTTGTATCATATATATATATATGGTGGAATTGATGAATTTGTTCATAGCTAAGATCTCTTGCTTGTCTTTTTTTTCTTTACAAAAAAATACCATGGTTCGAATATGAGGATGATACCAAAT GTACCAAACTTTTGGAGTAGGTCTTGTTTTGTTCCACATGTAAATCATTCTATCTTGCTTCTGAAGCCACCCTTTTCATAACATAACAAACTCTCCCCCTTTTCTTTTTTCTCATTTGCTTACTGTCCATTACCCTTAACTACAACATAATCTTATCATTTGCTTCTCAGCATTCTTCATTTAATCACTTCTACCTTTTCCCTTCTCCACAACATGAGAGCCATTGGAAAATTTGTCGCTCTTCCTTTCTTATCAGGTTGTGCTTCTCGTTCTAGTGTCGCTACGAGTACATCCATTTCTACGACTCAAATCCGAGAGCTTAAAGAAGTAAACCCAAGTGTAGCAAGAAGAGAAGAAAGTGAAAATAAAACTTCTGAAGTGAGAATGAAAAACCCTTCTGGTTTCTTATTTGTTCTGCCTAATATAACAAATGGAGTTCATAAGTTGGTCAGAAGCCTCAAAACTTTCTCCCAATTATTTGTTTTGAGAAAAGATGAAGAAGTAGAGGAAGTGGAAATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACACATTGGATTGGATGGCTCTACAACTACAAACCCTAATATTAAGGGTAATCATTGGGAAAATCTCAATAACTTTGTTCCTTCTGAGTTTCTTAATTCTTTTCCTTCCATTTCTTTAAGGCAATTTGAACTTTCAATGGCTGCTCAAGCACAATCTTCTCTTCTAGCGACATGATTTTATTCTTTCTCATTTTGCTTTCTTAATTCTTCCTTTTCTTTTTTTTCCCTTCAAAAAGCTTATACTTTGTGGAGGTAGTTGTTGATGATTTAAGGATCCCCTTCTCCTTATTAAACAATGGTGGTAAGGAGAAAAAAAATGATGTTTGTATCATATATATATATATGGTGGAATTGATGAATTTGTTCATAGCTAAGATCTCTTGCTTGTCTTTTTTTTCTTTACAAAAAAATACCATGGTTCGAATATGAGGATGATACCAAAT ATGAGAGCCATTGGAAAATTTGTCGCTCTTCCTTTCTTATCAGGTTGTGCTTCTCGTTCTAGTGTCGCTACGAGTACATCCATTTCTACGACTCAAATCCGAGAGCTTAAAGAAGTAAACCCAAGTGTAGCAAGAAGAGAAGAAAGTGAAAATAAAACTTCTGAAGTGAGAATGAAAAACCCTTCTGGTTTCTTATTTGTTCTGCCTAATATAACAAATGGAGTTCATAAGTTGGTCAGAAGCCTCAAAACTTTCTCCCAATTATTTGTTTTGAGAAAAGATGAAGAAGTAGAGGAAGTGGAAATGGAGATTGGATATCCAACAGATGTGAAGCATGTGACACACATTGGATTGGATGGCTCTACAACTACAAACCCTAATATTAAGGGTAATCATTGGGAAAATCTCAATAACTTTGTTCCTTCTGAGTTTCTTAATTCTTTTCCTTCCATTTCTTTAAGGCAATTTGAACTTTCAATGGCTGCTCAAGCACAATCTTCTCTTCTAGCGACATGA MRAIGKFVALPFLSGCASRSSVATSTSISTTQIRELKEVNPSVARREESENKTSEVRMKNPSGFLFVLPNITNGVHKLVRSLKTFSQLFVLRKDEEVEEVEMEIGYPTDVKHVTHIGLDGSTTTNPNIKGNHWENLNNFVPSEFLNSFPSISLRQFELSMAAQAQSSLLAT Homology
BLAST of CcUC08G148300 vs. NCBI nr
Match: XP_008464328.1 (PREDICTED: CRIB domain-containing protein RIC4-like [Cucumis melo]) HSP 1 Score: 271.9 bits (694), Expect = 3.7e-69 Identity = 149/180 (82.78%), Postives = 161/180 (89.44%), Query Frame = 0
BLAST of CcUC08G148300 vs. NCBI nr
Match: XP_038886498.1 (CRIB domain-containing protein RIC4-like [Benincasa hispida]) HSP 1 Score: 271.6 bits (693), Expect = 4.8e-69 Identity = 151/181 (83.43%), Postives = 162/181 (89.50%), Query Frame = 0
BLAST of CcUC08G148300 vs. NCBI nr
Match: XP_011656483.1 (CRIB domain-containing protein RIC4 [Cucumis sativus]) HSP 1 Score: 265.4 bits (677), Expect = 3.4e-67 Identity = 146/183 (79.78%), Postives = 160/183 (87.43%), Query Frame = 0
BLAST of CcUC08G148300 vs. NCBI nr
Match: XP_022150356.1 (CRIB domain-containing protein RIC4-like [Momordica charantia]) HSP 1 Score: 249.6 bits (636), Expect = 1.9e-62 Identity = 139/174 (79.89%), Postives = 153/174 (87.93%), Query Frame = 0
BLAST of CcUC08G148300 vs. NCBI nr
Match: KAG6592890.1 (CRIB domain-containing protein RIC4, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 222.2 bits (565), Expect = 3.3e-54 Identity = 132/170 (77.65%), Postives = 143/170 (84.12%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy Swiss-Prot
Match: Q9FFD5 (CRIB domain-containing protein RIC4 OS=Arabidopsis thaliana OX=3702 GN=RIC4 PE=1 SV=1) HSP 1 Score: 80.5 bits (197), Expect = 2.0e-14 Identity = 63/146 (43.15%), Postives = 82/146 (56.16%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy Swiss-Prot
Match: Q8GYU0 (CRIB domain-containing protein RIC2 OS=Arabidopsis thaliana OX=3702 GN=RIC2 PE=1 SV=1) HSP 1 Score: 69.3 bits (168), Expect = 4.7e-11 Identity = 31/59 (52.54%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy Swiss-Prot
Match: F4IVV0 (CRIB domain-containing protein RIC1 OS=Arabidopsis thaliana OX=3702 GN=RIC1 PE=1 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 4.6e-06 Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy Swiss-Prot
Match: Q1G3Y0 (CRIB domain-containing protein RIC9 OS=Arabidopsis thaliana OX=3702 GN=RIC9 PE=1 SV=1) HSP 1 Score: 50.4 bits (119), Expect = 2.3e-05 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy Swiss-Prot
Match: Q9M0Y9 (CRIB domain-containing protein RIC10 OS=Arabidopsis thaliana OX=3702 GN=RIC10 PE=2 SV=1) HSP 1 Score: 49.7 bits (117), Expect = 3.9e-05 Identity = 30/77 (38.96%), Postives = 43/77 (55.84%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy TrEMBL
Match: A0A1S3CMR6 (CRIB domain-containing protein RIC4-like OS=Cucumis melo OX=3656 GN=LOC103502241 PE=4 SV=1) HSP 1 Score: 271.9 bits (694), Expect = 1.8e-69 Identity = 149/180 (82.78%), Postives = 161/180 (89.44%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy TrEMBL
Match: A0A6J1DBA0 (CRIB domain-containing protein RIC4-like OS=Momordica charantia OX=3673 GN=LOC111018544 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 9.4e-63 Identity = 139/174 (79.89%), Postives = 153/174 (87.93%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy TrEMBL
Match: A0A6J1H8M6 (CRIB domain-containing protein RIC4-like OS=Cucurbita moschata OX=3662 GN=LOC111460649 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 8.0e-54 Identity = 131/172 (76.16%), Postives = 144/172 (83.72%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy TrEMBL
Match: A0A6J1KWH2 (CRIB domain-containing protein RIC4-like OS=Cucurbita maxima OX=3661 GN=LOC111498181 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 1.2e-52 Identity = 130/170 (76.47%), Postives = 140/170 (82.35%), Query Frame = 0
BLAST of CcUC08G148300 vs. ExPASy TrEMBL
Match: A0A1U7Z573 (CRIB domain-containing protein RIC4-like OS=Nelumbo nucifera OX=4432 GN=LOC104589361 PE=4 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 6.0e-33 Identity = 94/166 (56.63%), Postives = 117/166 (70.48%), Query Frame = 0
BLAST of CcUC08G148300 vs. TAIR 10
Match: AT5G16490.1 (ROP-interactive CRIB motif-containing protein 4 ) HSP 1 Score: 80.5 bits (197), Expect = 1.5e-15 Identity = 63/146 (43.15%), Postives = 82/146 (56.16%), Query Frame = 0
BLAST of CcUC08G148300 vs. TAIR 10
Match: AT1G27380.2 (ROP-interactive CRIB motif-containing protein 2 ) HSP 1 Score: 69.3 bits (168), Expect = 3.4e-12 Identity = 31/59 (52.54%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of CcUC08G148300 vs. TAIR 10
Match: AT1G27380.1 (ROP-interactive CRIB motif-containing protein 2 ) HSP 1 Score: 69.3 bits (168), Expect = 3.4e-12 Identity = 31/59 (52.54%), Postives = 47/59 (79.66%), Query Frame = 0
BLAST of CcUC08G148300 vs. TAIR 10
Match: AT2G33460.1 (ROP-interactive CRIB motif-containing protein 1 ) HSP 1 Score: 52.8 bits (125), Expect = 3.3e-07 Identity = 27/50 (54.00%), Postives = 36/50 (72.00%), Query Frame = 0
BLAST of CcUC08G148300 vs. TAIR 10
Match: AT1G61795.1 (PAK-box/P21-Rho-binding family protein ) HSP 1 Score: 50.4 bits (119), Expect = 1.6e-06 Identity = 25/48 (52.08%), Postives = 34/48 (70.83%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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