CcUC08G147230 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G147230
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	E3 ubiquitin-protein ligase RNF126-like
Location	CicolChr08: 5330142 .. 5330795 (+)
RNA-Seq Expression	CcUC08G147230
Synteny	CcUC08G147230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTCCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATCTTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGAGGGAGGCTCTGTTTCCTTTCTCTAATCTGAGGCATCCTCGACAACATCAAGGAATGGAGTTTTCAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTATTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGCTTCAAAATAGAGGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGGGGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGCGAAGATCTAGAAGGGAAGGGGATGGAAGTGAGCAGGATTCCGTGCGGTCATGTATATCACAAATCATGCATCCTCACTTGGCTTCAAATCAACAACTCTTGTCCATTGTGTAGATCACCATTACAGTCATGA

mRNA sequence

ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTCCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATCTTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGAGGGAGGCTCTGTTTCCTTTCTCTAATCTGAGGCATCCTCGACAACATCAAGGAATGGAGTTTTCAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTATTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGCTTCAAAATAGAGGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGGGGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGCGAAGATCTAGAAGGGAAGGGGATGGAAGTGAGCAGGATTCCGTGCGGTCATGTATATCACAAATCATGCATCCTCACTTGGCTTCAAATCAACAACTCTTGTCCATTGTGTAGATCACCATTACAGTCATGA

Coding sequence (CDS)

ATGTCTTTCTCTATTGCTTCATCCCTCGAATATAGTTTTCGCAGCACTCCAAACAGCGATCAAATCCTGGAAGTCCGATTTGGGCATTGCAGCCGCCTGATTTCTCGATCTTCCTCTCCCGGAATCATTCCAGACCAAATACTGCAACATATTCCCTCAACTCTAATGAGGGAGGCTCTGTTTCCTTTCTCTAATCTGAGGCATCCTCGACAACATCAAGGAATGGAGTTTTCAGTGACTGAGTTTCTGCGTTCCTTCAACCTCCATTCCTCTATTTGTCAAATCATGTGTCGAAAGATTCTATCCTTTGCCCGACAGTTTGACGGGAGCTTCAAAATAGAGGCGAAGATCGATTACATGGAGGACTTGATCTGGAATATGGAGGTTGTCCCTGAGCTATTATACCCAATTTCTATTATTTCTGAAGAAGCTGGAGCAGGGGCGCCGGAGTCGGTAATTGAGAGATTAAGGAAGCAGAAATTTGAAGAAGAAGAAGAAGAGATGGAAGAGTGTTGTGTTTGCGAAGATCTAGAAGGGAAGGGGATGGAAGTGAGCAGGATTCCGTGCGGTCATGTATATCACAAATCATGCATCCTCACTTGGCTTCAAATCAACAACTCTTGTCCATTGTGTAGATCACCATTACAGTCATGA

Protein sequence

MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMREALFPFSNLRHPRQHQGMEFSVTEFLRSFNLHSSICQIMCRKILSFARQFDGSFKIEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFEEEEEEMEECCVCEDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQS

Homology

[Close]

BLAST of CcUC08G147230 vs. NCBI nr
Match: XP_038876917.1 (E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida])

HSP 1 Score: 271.6 bits (693), Expect = 6.1e-69
Identity = 151/236 (63.98%), Postives = 175/236 (74.15%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMREAL 60
           MSFS  SS+ Y F  TPNSDQ+L+VRFG CSRLISRS SPGIIPD+ILQ   ST + EAL
Sbjct: 1   MSFSTTSSIAYYFHGTPNSDQVLQVRFGVCSRLISRSPSPGIIPDRILQQTRSTPIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEFSVTEFLRSFNLHSSICQIMCRKILSFARQFD---GSFKIEAKI 120
           FPF+N+R   +   +EF V  FLRSFNLHSS+CQ+M RKILSFA+QFD   GSFKIEA I
Sbjct: 61  FPFTNVRDVGEEAAVEFLVNGFLRSFNLHSSVCQMMSRKILSFAQQFDANNGSFKIEANI 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEEA-------------GAGAPESVIERLRKQKFE-- 180
           DYM++  W ME V   L+P SII EE               AGAPES IER+RKQKF+  
Sbjct: 121 DYMKE-FW-MEAV-SWLHPNSIIGEEGFEINFEEGPPPARRAGAPESAIERVRKQKFDGF 180

Query: 181 EEEEEMEECCV-CEDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQS 218
           +EEEE  ECCV CEDL+ KGMEVSRIPCGHVYHKSCILTWL+ +N+CPLCR  L++
Sbjct: 181 KEEEETGECCVCCEDLKRKGMEVSRIPCGHVYHKSCILTWLERSNTCPLCRRSLEA 233

[Close]

BLAST of CcUC08G147230 vs. NCBI nr
Match: XP_008457277.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger protein 165-like [Cucumis melo var. makuwa] >TYK14831.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 235.0 bits (598), Expect = 6.3e-58
Identity = 132/226 (58.41%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMREAL 60
           MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+ EAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEFSVTEFLRSFNLHSSICQIMCRKILSFARQFDGS---FKIEAKI 120
           F  SNLR P Q Q +++ V EFL SFNL SS+C+I+   ILSFA+QFD +    KIEA +
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQKF----EEEEEEMEEC 180
           D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK     EEEEEE+ +C
Sbjct: 121 DHIKE-YWT-EAPPE-LNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDC 180

Query: 181 CV-CEDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 217
           CV CE+++ KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+
Sbjct: 181 CVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]

BLAST of CcUC08G147230 vs. NCBI nr
Match: XP_004139003.1 (E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical protein Csa_005955 [Cucumis sativus])

HSP 1 Score: 233.0 bits (593), Expect = 2.4e-57
Identity = 128/226 (56.64%), Postives = 161/226 (71.24%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMREAL 60
           MSFS  S ++ SF   PN+DQ L VR   CSRLIS+S +P I+PD IL+  P TL+ EAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEFSVTEFLRSFNLHSSICQIMCRKILSFARQFD---GSFKIEAKI 120
           F  SNL++P Q Q +E+ V EFLRSFNL SS+C+I+   ILSFA+QFD     FKIE  +
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFE----EEEEEMEEC 180
           DY+++  W  E  PE LYPIS + EE     GA ES IER++KQKF+    EEEEE+ +C
Sbjct: 121 DYIKE-YWT-EAAPE-LYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDC 180

Query: 181 CV-CEDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 217
            V CE+++ KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+
Sbjct: 181 SVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]

BLAST of CcUC08G147230 vs. NCBI nr
Match: KAA0043526.1 (RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 229.9 bits (585), Expect = 2.0e-56
Identity = 132/224 (58.93%), Postives = 154/224 (68.75%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMREAL 60
           MS S +SS + SF +TPN+D  L  RFG+ SRL        II DQILQ  PS LM E L
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 154

Query: 61  FPFSNLRHPRQHQGMEFSVTEFLRSFNLHS--SICQIMCRKILSFARQF---DGSFKIEA 120
            PFSNL HP Q Q +EF V EFL SFNLHS  S  + +CRKILSFA QF    GSFKIEA
Sbjct: 155 IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 214

Query: 121 KIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFE--EEEEEMEECCV 180
            ++++EDLI   +   E   P          GAPES IERLRK+KF+   +EEE+ +C V
Sbjct: 215 NVEHVEDLIIGEQGFQETPSP------PRTTGAPESAIERLRKEKFDVLNKEEEIGDCSV 274

Query: 181 C-EDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 217
           C E+L+G+G EVSRIPCGHVYHKSCILTWLQINNSCPLCR+PLQ
Sbjct: 275 CYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQ 304

[Close]

BLAST of CcUC08G147230 vs. NCBI nr
Match: XP_008442291.1 (PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger protein 165-like protein [Cucumis melo var. makuwa] >TYK16021.1 RING finger protein 165-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 189.1 bits (479), Expect = 4.0e-44
Identity = 104/171 (60.82%), Postives = 124/171 (72.51%), Query Frame = 0


Query: 56  MREALFPFSNLRHPRQHQGMEFSVTEFLRSFNLHSSICQIMCRKILSFARQFDG---SFK 115
           M + L PFSNLRHPRQ Q ++F V +FL SFNLHSS+ + +C +ILSFA QF     SFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 116 IEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERL-RKQKFE----EEEEE 175
           IEA ID++EDLI   +   E   P +        GAPES IERL  KQKF+    EEEEE
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRT-------RGAPESAIERLIMKQKFDGFNKEEEEE 120

Query: 176 MEECCVC-EDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQS 218
           + +C VC E+L+GKG EVSRIPCGHVYHKSC+LTWLQINNSCPLCR+PL+S
Sbjct: 121 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 164

[Close]

BLAST of CcUC08G147230 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 63.9 bits (154), Expect = 2.5e-09
Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 148 APESVIERLRKQKFEEE--EEEMEECCVCEDLEGKGMEVSRIPCGHVYHKSCILTWLQIN 207
           A +S I+ L   K  ++  + EM +C VC D    G +V ++PC HV+H+ C+L WL+++
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250

Query: 208 NSCPLCRSPL 216
           NSCP+CR  L
Sbjct: 251 NSCPVCRFEL 260

[Close]

BLAST of CcUC08G147230 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.3e-09
Identity = 29/70 (41.43%), Postives = 41/70 (58.57%), Query Frame = 0


Query: 148 APESVIERLRKQKFEEE--EEEMEECCVCEDLEGKGMEVSRIPCGHVYHKSCILTWLQIN 207
           A +S IE L      +     E  +C VC D   +G E  ++PC H+YHK C+L WL+++
Sbjct: 199 ASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYHKDCLLPWLELH 258

Query: 208 NSCPLCRSPL 216
           NSCP+CR  L
Sbjct: 259 NSCPVCRHEL 268

[Close]

BLAST of CcUC08G147230 vs. ExPASy Swiss-Prot
Match: Q9C1X4 (Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAP32A8.03c PE=4 SV=1)

HSP 1 Score: 62.4 bits (150), Expect = 7.3e-09
Identity = 28/73 (38.36%), Postives = 48/73 (65.75%), Query Frame = 0


Query: 144 AGAGAPESVIERLRKQKFEEE-EEEMEECCVCEDLEGKGMEVSRIPCGHVYHKSCILTWL 203
           A A APE VI +++ QK  +E  +E  EC +C ++     +V ++PC H +H++CI  WL
Sbjct: 368 APAPAPEDVIAKMKVQKPPKELIDEEGECTICMEMFKINDDVIQLPCKHYFHENCIKPWL 427

Query: 204 QINNSCPLCRSPL 216
           ++N +C +CR+P+
Sbjct: 428 RVNGTCAICRAPV 440

[Close]

BLAST of CcUC08G147230 vs. ExPASy Swiss-Prot
Match: O22197 (Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RHC1A PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.8e-08
Identity = 29/72 (40.28%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 148 APESVIERLRKQKFEEEEEEMEE--CCVCEDLEGKGMEVSRIPCGHVYHKSCILTWLQIN 207
           AP S I+ L   K  +      +  C VC+D    G E  ++PC H+YH  CI+ WL  +
Sbjct: 165 APRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQH 224

Query: 208 NSCPLCRSPLQS 218
           NSCP+CR  L S
Sbjct: 225 NSCPVCRQELPS 236

[Close]

BLAST of CcUC08G147230 vs. ExPASy Swiss-Prot
Match: Q9SNB6 (E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 6.2e-08
Identity = 29/79 (36.71%), Postives = 42/79 (53.16%), Query Frame = 0


Query: 140 ISEEAGAGAPESVIERLRKQKFEEEEEEME-ECCVCEDLEGKGMEVSRIPCGHVYHKSCI 199
           I       A +S IE L + +  +   + E  C VC ++   G+E   +PC H++H  CI
Sbjct: 183 IGRSGNPPASKSAIESLPRVEISDCHTKAEANCAVCTEVFEAGIEGREMPCKHIFHGDCI 242

Query: 200 LTWLQINNSCPLCRSPLQS 218
           + WL I NSCP+CR  L S
Sbjct: 243 VPWLSIRNSCPVCRFELPS 261

[Close]

BLAST of CcUC08G147230 vs. ExPASy TrEMBL
Match: A0A5D3CSM6 (RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold472G00260 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 3.0e-58
Identity = 132/226 (58.41%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMREAL 60
           MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+ EAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEFSVTEFLRSFNLHSSICQIMCRKILSFARQFDGS---FKIEAKI 120
           F  SNLR P Q Q +++ V EFL SFNL SS+C+I+   ILSFA+QFD +    KIEA +
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQKF----EEEEEEMEEC 180
           D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK     EEEEEE+ +C
Sbjct: 121 DHIKE-YWT-EAPPE-LNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDC 180

Query: 181 CV-CEDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 217
           CV CE+++ KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+
Sbjct: 181 CVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]

BLAST of CcUC08G147230 vs. ExPASy TrEMBL
Match: A0A1S3C5T8 (RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1)

HSP 1 Score: 235.0 bits (598), Expect = 3.0e-58
Identity = 132/226 (58.41%), Postives = 162/226 (71.68%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMREAL 60
           MSFS  S LE SF   PN+DQ L VRFG CSRLIS+S SP IIPD IL+  P TL+ EAL
Sbjct: 1   MSFSATSCLECSFSGYPNTDQTLIVRFGSCSRLISQSPSPEIIPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEFSVTEFLRSFNLHSSICQIMCRKILSFARQFDGS---FKIEAKI 120
           F  SNLR P Q Q +++ V EFL SFNL SS+C+I+   ILSFA+QFD +    KIEA +
Sbjct: 61  FSLSNLRCPLQQQELQYLVNEFLHSFNLRSSVCRIISHNILSFAQQFDINNEWVKIEANV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEE--AGAGAPESVIERLRKQKF----EEEEEEMEEC 180
           D++++  W  E  PE L PIS + EE  +  GA ES IER++KQK     EEEEEE+ +C
Sbjct: 121 DHIKE-YWT-EAPPE-LNPISTVGEEGLSPRGASESAIERVKKQKLDWFSEEEEEEIGDC 180

Query: 181 CV-CEDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 217
           CV CE+++ KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+
Sbjct: 181 CVCCEEMKRKGEEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]

BLAST of CcUC08G147230 vs. ExPASy TrEMBL
Match: A0A0A0LHS2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 PE=4 SV=1)

HSP 1 Score: 233.0 bits (593), Expect = 1.2e-57
Identity = 128/226 (56.64%), Postives = 161/226 (71.24%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMREAL 60
           MSFS  S ++ SF   PN+DQ L VR   CSRLIS+S +P I+PD IL+  P TL+ EAL
Sbjct: 1   MSFSATSCVQCSFSGYPNTDQTLIVRLRFCSRLISQSLAPEIVPDVILEQTPFTLIGEAL 60

Query: 61  FPFSNLRHPRQHQGMEFSVTEFLRSFNLHSSICQIMCRKILSFARQFD---GSFKIEAKI 120
           F  SNL++P Q Q +E+ V EFLRSFNL SS+C+I+   ILSFA+QFD     FKIE  +
Sbjct: 61  FSLSNLQYPLQQQELEYMVNEFLRSFNLRSSVCRIVSHNILSFAQQFDINNECFKIETNV 120

Query: 121 DYMEDLIWNMEVVPELLYPISIISEEA--GAGAPESVIERLRKQKFE----EEEEEMEEC 180
           DY+++  W  E  PE LYPIS + EE     GA ES IER++KQKF+    EEEEE+ +C
Sbjct: 121 DYIKE-YWT-EAAPE-LYPISTVGEEGLPPRGASESAIERVKKQKFDGFRGEEEEEIGDC 180

Query: 181 CV-CEDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 217
            V CE+++ KG EV RIPCGHVYHKSCIL WL+I+NSCPLCR+ L+
Sbjct: 181 SVCCEEIKRKGGEVRRIPCGHVYHKSCILKWLEISNSCPLCRAALE 223

[Close]

BLAST of CcUC08G147230 vs. ExPASy TrEMBL
Match: A0A5A7TNB0 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold335G00200 PE=4 SV=1)

HSP 1 Score: 229.9 bits (585), Expect = 9.8e-57
Identity = 132/224 (58.93%), Postives = 154/224 (68.75%), Query Frame = 0


Query: 1   MSFSIASSLEYSFRSTPNSDQILEVRFGHCSRLISRSSSPGIIPDQILQHIPSTLMREAL 60
           MS S +SS + SF +TPN+D  L  RFG+ SRL        II DQILQ  PS LM E L
Sbjct: 95  MSLSTSSSFQCSFSATPNTDHFLICRFGYSSRL--------IIVDQILQQTPSILMGETL 154

Query: 61  FPFSNLRHPRQHQGMEFSVTEFLRSFNLHS--SICQIMCRKILSFARQF---DGSFKIEA 120
            PFSNL HP Q Q +EF V EFL SFNLHS  S  + +CRKILSFA QF    GSFKIEA
Sbjct: 155 IPFSNLWHPEQQQSIEFLVNEFLGSFNLHSFASARRTICRKILSFALQFHNVHGSFKIEA 214

Query: 121 KIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLRKQKFE--EEEEEMEECCV 180
            ++++EDLI   +   E   P          GAPES IERLRK+KF+   +EEE+ +C V
Sbjct: 215 NVEHVEDLIIGEQGFQETPSP------PRTTGAPESAIERLRKEKFDVLNKEEEIGDCSV 274

Query: 181 C-EDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQ 217
           C E+L+G+G EVSRIPCGHVYHKSCILTWLQINNSCPLCR+PLQ
Sbjct: 275 CYEELKGQGKEVSRIPCGHVYHKSCILTWLQINNSCPLCRAPLQ 304

[Close]

BLAST of CcUC08G147230 vs. ExPASy TrEMBL
Match: A0A5D3CVT7 (RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold32G00140 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 1.9e-44
Identity = 104/171 (60.82%), Postives = 124/171 (72.51%), Query Frame = 0


Query: 56  MREALFPFSNLRHPRQHQGMEFSVTEFLRSFNLHSSICQIMCRKILSFARQFDG---SFK 115
           M + L PFSNLRHPRQ Q ++F V +FL SFNLHSS+ + +C +ILSFA QF     SFK
Sbjct: 1   MGDTLIPFSNLRHPRQQQSIQFLVNQFLCSFNLHSSVRRTICHEILSFALQFRAILPSFK 60

Query: 116 IEAKIDYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERL-RKQKFE----EEEEE 175
           IEA ID++EDLI   +   E   P +        GAPES IERL  KQKF+    EEEEE
Sbjct: 61  IEANIDHVEDLIIGEQGFQETPPPRT-------RGAPESAIERLIMKQKFDGFNKEEEEE 120

Query: 176 MEECCVC-EDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQS 218
           + +C VC E+L+GKG EVSRIPCGHVYHKSC+LTWLQINNSCPLCR+PL+S
Sbjct: 121 IGDCSVCYEELKGKGKEVSRIPCGHVYHKSCVLTWLQINNSCPLCRAPLES 164

[Close]

BLAST of CcUC08G147230 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.9 bits (154), Expect = 1.8e-10
Identity = 29/70 (41.43%), Postives = 45/70 (64.29%), Query Frame = 0


Query: 148 APESVIERLRKQKFEEE--EEEMEECCVCEDLEGKGMEVSRIPCGHVYHKSCILTWLQIN 207
           A +S I+ L   K  ++  + EM +C VC D    G +V ++PC HV+H+ C+L WL+++
Sbjct: 191 ASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFHQDCLLPWLELH 250

Query: 208 NSCPLCRSPL 216
           NSCP+CR  L
Sbjct: 251 NSCPVCRFEL 260

[Close]

BLAST of CcUC08G147230 vs. TAIR 10
Match: AT1G45180.1 (RING/U-box superfamily protein )

HSP 1 Score: 62.4 bits (150), Expect = 5.2e-10
Identity = 25/67 (37.31%), Postives = 43/67 (64.18%), Query Frame = 0


Query: 150 ESVIERLRKQKFE---EEEEEMEECCVCEDLEGKGMEVSRIPCGHVYHKSCILTWLQINN 209
           E++  RL++QK++      +E+E CCVC++   +  E+ R+ CGH +H  CI  WL+  N
Sbjct: 568 ETISNRLKQQKYKSSTRSSQEVEPCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKN 627

Query: 210 SCPLCRS 214
            CP+C++
Sbjct: 628 LCPICKT 634

[Close]

BLAST of CcUC08G147230 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.8 bits (146), Expect = 1.5e-09
Identity = 28/70 (40.00%), Postives = 40/70 (57.14%), Query Frame = 0


Query: 148 APESVIERLRKQKFEEEE--EEMEECCVCEDLEGKGMEVSRIPCGHVYHKSCILTWLQIN 207
           A E  I  L   K   +    +M +C VC +    G + + +PC H+YHK CI+ WL++N
Sbjct: 199 ASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYHKDCIVPWLRLN 258

Query: 208 NSCPLCRSPL 216
           NSCP+CR  L
Sbjct: 259 NSCPICRRDL 268

[Close]

BLAST of CcUC08G147230 vs. TAIR 10
Match: AT5G60820.1 (RING/U-box superfamily protein )

HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09
Identity = 37/105 (35.24%), Postives = 54/105 (51.43%), Query Frame = 0


Query: 118 DYMEDLIWNMEVVPELLYPISIISEEAGAGAPESVIERLR-----KQKFEEEEEEMEECC 177
           DY ED +   E   E+L+   I S      A +S I+ L+      +   E +++   C 
Sbjct: 317 DY-EDYLHTTEY--EMLFEAEISSGIGKPPASKSFIKNLKVSPLSNEDVMENDDDAVCCA 376

Query: 178 VCEDLEGKGMEVSRIPCGHVYHKSCILTWLQINNSCPLCRSPLQS 218
           VC++    G EV+ +PC H YH  CI+ WL I N+CP+CR  L S
Sbjct: 377 VCKEEMIVGKEVAELPCRHKYHSECIVPWLGIRNTCPVCRFELPS 418

[Close]

BLAST of CcUC08G147230 vs. TAIR 10
Match: AT2G40830.2 (RING-H2 finger C1A )

HSP 1 Score: 59.7 bits (143), Expect = 3.4e-09
Identity = 29/72 (40.28%), Postives = 39/72 (54.17%), Query Frame = 0


Query: 148 APESVIERLRKQKFEEEEEEMEE--CCVCEDLEGKGMEVSRIPCGHVYHKSCILTWLQIN 207
           AP S I+ L   K  +      +  C VC+D    G E  ++PC H+YH  CI+ WL  +
Sbjct: 165 APRSAIDALPTIKIAQRHLRSSDSNCPVCKDEFELGSEAKQMPCNHIYHSDCIVPWLVQH 224

Query: 208 NSCPLCRSPLQS 218
           NSCP+CR  L S
Sbjct: 225 NSCPVCRQELPS 236

The following BLAST results are available for this feature:

BLAST of CcUC08G147230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038876917.1	6.1e-69	63.98	E3 ubiquitin-protein ligase DZIP3-like [Benincasa hispida] >XP_038876930.1 E3 ub...	[more]
XP_008457277.1	6.3e-58	58.41	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0033274.1 RING finger...	[more]
XP_004139003.1	2.4e-57	56.64	E3 ubiquitin-protein ligase RING1 [Cucumis sativus] >KGN61460.1 hypothetical pro...	[more]
KAA0043526.1	2.0e-56	58.93	RING finger protein 165-like protein [Cucumis melo var. makuwa]	[more]
XP_008442291.1	4.0e-44	60.82	PREDICTED: RING finger protein 165-like [Cucumis melo] >KAA0041218.1 RING finger...	[more]

BLAST of CcUC08G147230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LPN7	2.5e-09	41.43	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
P0CH30	7.3e-09	41.43	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9C1X4	7.3e-09	38.36	Uncharacterized RING finger protein P32A8.03c OS=Schizosaccharomyces pombe (stra...	[more]
O22197	4.8e-08	40.28	Probable E3 ubiquitin-protein ligase RHC1A OS=Arabidopsis thaliana OX=3702 GN=RH...	[more]
Q9SNB6	6.2e-08	36.71	E3 ubiquitin-protein ligase RDUF1 OS=Arabidopsis thaliana OX=3702 GN=RDUF1 PE=1 ...	[more]

BLAST of CcUC08G147230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CSM6	3.0e-58	58.41	RING finger protein 165-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A1S3C5T8	3.0e-58	58.41	RING finger protein 165-like OS=Cucumis melo OX=3656 GN=LOC103497006 PE=4 SV=1	[more]
A0A0A0LHS2	1.2e-57	56.64	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G130680 P...	[more]
A0A5A7TNB0	9.8e-57	58.93	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3CVT7	1.9e-44	60.82	RING finger protein 165-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]

BLAST of CcUC08G147230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G19950.1	1.8e-10	41.43	RING/U-box superfamily protein	[more]
AT1G45180.1	5.2e-10	37.31	RING/U-box superfamily protein	[more]
AT1G60360.1	1.5e-09	40.00	RING/U-box superfamily protein	[more]
AT5G60820.1	2.0e-09	35.24	RING/U-box superfamily protein	[more]
AT2G40830.2	3.4e-09	40.28	RING-H2 finger C1A	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 171..211 e-value: 2.5E-6 score: 37.0
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 170..212 e-value: 2.4E-11 score: 43.8
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 171..212 score: 12.194218
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 139..216 e-value: 4.5E-18 score: 66.7
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 53..216
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 53..216
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 153..215

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G147230.1	CcUC08G147230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity