CcUC08G147210 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G147210
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr08: 5280423 .. 5281868 (+)
RNA-Seq ExpressionCcUC08G147210
SyntenyCcUC08G147210
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTAAGTTTAAAGAGGAGAGAGGAGAATATTGCGAAATATGGAAAATTTGTATGAGTAAATTATTAGTAATTATAAAATAAAATAAAAAGTAGGCAAATATTGTACACGTGTTGCAGAGTTATAATCACTTCAACACATGGACACACACTCATCAAGAAACTAACGCAACTTCATTACTTCACCAAAAATTCACTTTCCTTATTTCTTACTTTTCTCTTTATTCACATGCAGAATATTAATCAAAAAGAAGAATTCAGAATGAAAGAAAAAAAATCAAGAACTCCCCTGGATCATCAATCGAAATTCAAAGATTAACAACAAAATTAACTCCGTTTTCCTGTAATTCCCAAGAGCACCCATACAATGGAAGCTTCATTCAAGGTAAGATTAGTTGTATTGCCATCTAATTTTAATTTTCTTTACAAAAATTATATTCATTAAAAAAAAAAAAAAACGTTGAATTTTGTGTCTTATCCTTCTAATTCCCTTCTACACAAAGGACATGAATTGTTGATGTTGAGCCATTTGAGAATACATGACTTATGATACACATGCCCGCAGGGTATTCTGACCACCTCCTTCTCTTTTTCCCCGTTGAGATCCTCAAAACAAACACTGCACTGATTTCCCACCTCATCTTCCCGCCCAATCCCATCATAGTTCTCCTTCATCAGCCGCTCGATCGCCGACACCGGTGGCGCATCTTGTGTTGGGTCCAGGTCCACCCAGTGCGTGTACACAAAATCAACAGCGGCGGTGATGTGAAAGTTGAGATTGAGGTTGCCGGCGGCCAATCGAAGGGCGAAGGAGGTGATTTTGTGGAAGATGGCGTCGCAAGCGGCGACGGAGAGGTTGAAGGAAGAGAGAAAGCGGAGGAGGAAGTAGTGGGAGAGGAATGGTGGGTGTTGAAGCTCCCGCAGAGGGAACGGAAACAGAGCATCGGAAATTAGCGTCGGGGAAGTTTGTTGGAGGATTTGATGGGAAGGTGTAGCCACCAATTGGCTGTAATGCCCTAATCGGAGTTCCACAAATTGCAATGGTTGATCGTCGGTGGCCACACTGCCGTTGCGGTTGCTGCGAATACAATATCGGAGGGACAGAGTTGTAAGGGAAGACATGGTGATGAATTAGAGAGGTTGATCAAAACAAAGGAAAGATCAGAATTGAATTTGTGCGGGAGCGCCGGAGCGGGGTCTGATTTATAGGCAAAGTTTAAGACCGTTGTAATTTCAATTTTGAATAATTTCCACGGCATCGGAAAATCCTTCTACCGGATCTTTCCGATACGACGATGATCTCAACGGCTGATGTTCGTCGTCACTCGGATTTAACCAACGGCTTTTTTCACCTTCCTCCGTTCATGTGCAAACGCCCACCGCCTCACTAACATTTCGCATTTTACTTAAAATAAACATATTTTTTGTTTTTCTTTTTATTCAAGAG

mRNA sequence

ATGGTAAGGTATTCTGACCACCTCCTTCTCTTTTTCCCCGTTGAGATCCTCAAAACAAACACTGCACTGATTTCCCACCTCATCTTCCCGCCCAATCCCATCATAGTTCTCCTTCATCAGCCGCTCGATCGCCGACACCGGTGGCGCATCTTGTGTTGGGTCCAGGTCCACCCAGTGCGTGTACACAAAATCAACAGCGGCGGTGATGTGAAAGTTGAGATTGAGGTTGCCGGCGGCCAATCGAAGGGCGAAGGAGGTGATTTTGTGGAAGATGGCGTCGCAAGCGGCGACGGAGAGGTTGAAGGAAGAGAGAAAGCGGAGGAGGAAGTAGTGGGAGAGGAATGGTGGGTGTTGAAGCTCCCGCAGAGGGAACGGAAACAGAGCATCGGAAATTAGCGTCGGGGAAGTTTGTTGGAGGATTTGATGGGAAGGTGTAGCCACCAATTGGCTGTAATGCCCTAATCGGAGTTCCACAAATTGCAATGGTTGATCGTCGGTGGCCACACTGCCGTTGCGGTTGCTGCGAATACAATATCGGAGGGACAGAGTTGTAAGGGAAGACATGGTGATGAATTAGAGAGGTTGATCAAAACAAAGGAAAGATCAGAATTGAATTTGTGCGGGAGCGCCGGAGCGGGGTCTGATTTATAGGCAAAGTTTAAGACCGTTGTAATTTCAATTTTGAATAATTTCCACGGCATCGGAAAATCCTTCTACCGGATCTTTCCGATACGACGATGATCTCAACGGCTGATGTTCGTCGTCACTCGGATTTAACCAACGGCTTTTTTCACCTTCCTCCGTTCATGTGCAAACGCCCACCGCCTCACTAACATTTCGCATTTTACTTAAAATAAACATATTTTTTGTTTTTCTTTTTATTCAAGAG

Coding sequence (CDS)

ATGGTAAGGTATTCTGACCACCTCCTTCTCTTTTTCCCCGTTGAGATCCTCAAAACAAACACTGCACTGATTTCCCACCTCATCTTCCCGCCCAATCCCATCATAGTTCTCCTTCATCAGCCGCTCGATCGCCGACACCGGTGGCGCATCTTGTGTTGGGTCCAGGTCCACCCAGTGCGTGTACACAAAATCAACAGCGGCGGTGATGTGAAAGTTGAGATTGAGGTTGCCGGCGGCCAATCGAAGGGCGAAGGAGGTGATTTTGTGGAAGATGGCGTCGCAAGCGGCGACGGAGAGGTTGAAGGAAGAGAGAAAGCGGAGGAGGAAGTAGTGGGAGAGGAATGGTGGGTGTTGAAGCTCCCGCAGAGGGAACGGAAACAGAGCATCGGAAATTAG

Protein sequence

MVRYSDHLLLFFPVEILKTNTALISHLIFPPNPIIVLLHQPLDRRHRWRILCWVQVHPVRVHKINSGGDVKVEIEVAGGQSKGEGGDFVEDGVASGDGEVEGREKAEEEVVGEEWWVLKLPQRERKQSIGN
Homology
The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 81..104

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G147210.1CcUC08G147210.1mRNA