CcUC08G147200 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G147200
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	E3 ubiquitin-protein ligase RNF126-like
Location	CicolChr08: 5276752 .. 5277420 (-)
RNA-Seq Expression	CcUC08G147200
Synteny	CcUC08G147200

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCCGTAACAGTCTGTCCCTTCGATATTGGATCCGCAGCGACCCCAACGGCAGCGTCGCTACCGACGATCAACCATTGCAATTCGTCCAACTTCGATTGGGGAGTTTCAGTGAATTAGTGCTTGCACCTTCTCACCAAATCCTCCAACAAACTTCCCCAACTCTAATTTCCGATGCTCTGTTTCCATTCCCTCTGCGGGAGCTTGAAGACCCACCATTCCTCGCCCACTACTTCCTCCTTCGTTTTCTCTCTTCCTTCAACCTCTCCGCCGCCGCCTGTGACGCCATCTTCCACAAGATCGCCTCCTTCGCCCTCCGAATGGCCGCCGGAAACCTGAATCTCAACTTCCACATCATCGCCGCTGTGGATTTGGTGCACACGATCTGGGTGGACCTGGACCCAGCACTGCTTCTTCCACAAGATTCGGAGCCGGTGAGGAAAGCGGCGCCGGCGTCGGTGATGGAGCGGTTAATGAAGGAGAAGTATGATGGGAATGGGCGGGAAGAGACGGGAGATCAGTGCAGCGTTTGTTACGAGGATCTCCATGGGGAAAAGGAGTTGGCAAGAATCTCCTGTGGACATGTGTATCATAAACCCTGCATCCTCAAATGGCTTAAAATCAACAATTCATGTCCTTTGTGCAGAAGGGAATTAGAAGAATAA

mRNA sequence

ATGTCTTTCCGTAACAGTCTGTCCCTTCGATATTGGATCCGCAGCGACCCCAACGGCAGCGTCGCTACCGACGATCAACCATTGCAATTCGTCCAACTTCGATTGGGGAGTTTCAGTGAATTAGTGCTTGCACCTTCTCACCAAATCCTCCAACAAACTTCCCCAACTCTAATTTCCGATGCTCTGTTTCCATTCCCTCTGCGGGAGCTTGAAGACCCACCATTCCTCGCCCACTACTTCCTCCTTCGTTTTCTCTCTTCCTTCAACCTCTCCGCCGCCGCCTGTGACGCCATCTTCCACAAGATCGCCTCCTTCGCCCTCCGAATGGCCGCCGGAAACCTGAATCTCAACTTCCACATCATCGCCGCTGTGGATTTGGTGCACACGATCTGGGTGGACCTGGACCCAGCACTGCTTCTTCCACAAGATTCGGAGCCGGTGAGGAAAGCGGCGCCGGCGTCGGTGATGGAGCGGTTAATGAAGGAGAAGTATGATGGGAATGGGCGGGAAGAGACGGGAGATCAGTGCAGCGTTTGTTACGAGGATCTCCATGGGGAAAAGGAGTTGGCAAGAATCTCCTGTGGACATGTGTATCATAAACCCTGCATCCTCAAATGGCTTAAAATCAACAATTCATGTCCTTTGTGCAGAAGGGAATTAGAAGAATAA

Coding sequence (CDS)

ATGTCTTTCCGTAACAGTCTGTCCCTTCGATATTGGATCCGCAGCGACCCCAACGGCAGCGTCGCTACCGACGATCAACCATTGCAATTCGTCCAACTTCGATTGGGGAGTTTCAGTGAATTAGTGCTTGCACCTTCTCACCAAATCCTCCAACAAACTTCCCCAACTCTAATTTCCGATGCTCTGTTTCCATTCCCTCTGCGGGAGCTTGAAGACCCACCATTCCTCGCCCACTACTTCCTCCTTCGTTTTCTCTCTTCCTTCAACCTCTCCGCCGCCGCCTGTGACGCCATCTTCCACAAGATCGCCTCCTTCGCCCTCCGAATGGCCGCCGGAAACCTGAATCTCAACTTCCACATCATCGCCGCTGTGGATTTGGTGCACACGATCTGGGTGGACCTGGACCCAGCACTGCTTCTTCCACAAGATTCGGAGCCGGTGAGGAAAGCGGCGCCGGCGTCGGTGATGGAGCGGTTAATGAAGGAGAAGTATGATGGGAATGGGCGGGAAGAGACGGGAGATCAGTGCAGCGTTTGTTACGAGGATCTCCATGGGGAAAAGGAGTTGGCAAGAATCTCCTGTGGACATGTGTATCATAAACCCTGCATCCTCAAATGGCTTAAAATCAACAATTCATGTCCTTTGTGCAGAAGGGAATTAGAAGAATAA

Protein sequence

MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISDALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFALRMAAGNLNLNFHIIAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCYEDLHGEKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE

Homology

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BLAST of CcUC08G147200 vs. NCBI nr
Match: XP_011650219.1 (RING-H2 finger protein ATL16 [Cucumis sativus] >KGN63362.1 hypothetical protein Csa_022479 [Cucumis sativus])

HSP 1 Score: 305.8 bits (782), Expect = 3.0e-79
Identity = 154/225 (68.44%), Postives = 179/225 (79.56%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           MS   + S R  IR + NGS AT+ QPLQFV+LRLG FS+LVL+PSHQILQQTSP LISD
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFALRMAAGNLNLNFHI 120
            L  FPLRELEDPPF++H  L RFLSS+N+S A CDAIF KI+SFA ++ AGNLN NFHI
Sbjct: 61  TLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHI 120

Query: 121 IAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCY 180
           IAA+D V+T WVDLDPA    +D+  VR+ AP S +ERLMKEKYDGNG EE  D+CSVCY
Sbjct: 121 IAALDFVYTHWVDLDPA----EDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCY 180

Query: 181 EDLHG----EKELARISCGHVYHKPCILKWLKINNSCPLCRRELE 222
           EDLHG    EKE++RI CGH++HK CILKWLKI+NSCPLCR ELE
Sbjct: 181 EDLHGKTEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGELE 221

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BLAST of CcUC08G147200 vs. NCBI nr
Match: XP_031740500.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucumis sativus])

HSP 1 Score: 281.2 bits (718), Expect = 7.8e-72
Identity = 149/235 (63.40%), Postives = 176/235 (74.89%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           MS   + S +  IR +   S+ATD QPLQFVQLRL  F +LV  PS QILQQTSPTLISD
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFA---LRMAAGNLNLN 120
            L PF L ELEDPPF++++FL RFLSS+++SAA CDAIF+ I+SFA   L  A  N+N+N
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FHIIAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREET--GDQ 180
           FHIIA VD+V+T WVDLDPA    +D+  VRK A  SV+ER+MKEKYDGNG EE    DQ
Sbjct: 121 FHIIADVDIVYTHWVDLDPA----EDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQ 180

Query: 181 CSVCYEDLHG--------EKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE 223
           CSVCYE L+G        EKE++RI CGH+YHK CILKWLKI+NSCPLCRRELEE
Sbjct: 181 CSVCYEQLYGKRENENEKEKEVSRIPCGHMYHKSCILKWLKISNSCPLCRRELEE 231

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BLAST of CcUC08G147200 vs. NCBI nr
Match: XP_023006824.1 (RING-H2 finger protein ATL16-like [Cucurbita maxima])

HSP 1 Score: 248.4 bits (633), Expect = 5.6e-62
Identity = 120/222 (54.05%), Postives = 164/222 (73.87%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           ++F +SLS ++ IR++  G++A+ + P+QFV+LRLG  S L+   S QILQQ+  T + +
Sbjct: 3   LTFGDSLSFQFSIRTNTTGTLASHEHPMQFVELRLGHSSHLISRSSRQILQQSPSTPLGE 62

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFALRMAAGNLNLNFHI 120
           +LFPF LR+LE PPFL +Y +L FLSSF++  AACD I+ +I+SFALR+ A N++LNFHI
Sbjct: 63  SLFPFILRDLEHPPFLPNYHVLHFLSSFSIPVAACDIIYQEISSFALRLTADNVDLNFHI 122

Query: 121 IAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCY 180
           +  VD +  IWVDLDP  L+ + S P    APAS +ERL ++K+DG   EE    CSVC 
Sbjct: 123 VVDVDAIEMIWVDLDP-FLVEEYSPPAMNGAPASAIERLQRQKFDGLREEEEEGDCSVCC 182

Query: 181 EDLHGEKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE 223
           E L GE+E++RI CGHVYHK CILKWL+I+NSCPLCR +LE+
Sbjct: 183 EALRGEEEVSRIPCGHVYHKCCILKWLQISNSCPLCRTKLEQ 223

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BLAST of CcUC08G147200 vs. NCBI nr
Match: XP_022947933.1 (E3 ubiquitin-protein ligase RNF126-like [Cucurbita moschata] >XP_023532920.1 E3 ubiquitin-protein ligase RNF126-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 245.4 bits (625), Expect = 4.8e-61
Identity = 119/222 (53.60%), Postives = 167/222 (75.23%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           ++F + LS +  I+S  NG+VA+D QP+Q ++LRLG+ + L+   S QILQQT  T + D
Sbjct: 3   LTFHDYLSFQCSIQSTCNGTVASDQQPMQLLELRLGNSTHLISRSSRQILQQTPTTPMGD 62

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFALRMAAGNLNLNFHI 120
           ALFPF LR+L+ PPFL++ ++L+FLSSF++  AACD I+ +I+SFAL++AAGN++LNFHI
Sbjct: 63  ALFPFVLRDLQHPPFLSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNVDLNFHI 122

Query: 121 IAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCY 180
           +  VD++  IWVDLDP  L+ + S      APAS +ERL ++++DG   EE    CSVC 
Sbjct: 123 VVEVDVIEMIWVDLDP-FLVEEYSPAEMNGAPASAIERLQRQEFDGLREEEEEGDCSVCC 182

Query: 181 EDLHGEKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE 223
           E L GE+E++RI CGHVYHK CILKWL+++NSCPLCR +LE+
Sbjct: 183 EALKGEEEVSRIPCGHVYHKCCILKWLQMSNSCPLCRTKLEQ 223

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BLAST of CcUC08G147200 vs. NCBI nr
Match: KAG6605221.1 (E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 244.6 bits (623), Expect = 8.1e-61
Identity = 119/222 (53.60%), Postives = 167/222 (75.23%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           ++F + LS +  I+S  NG+VA+D QP+Q ++LRLG+ + L+   S QILQQT  T + D
Sbjct: 3   LTFHDYLSFQCSIQSTCNGTVASDQQPMQLLELRLGNSTHLISRSSRQILQQTPTTPMGD 62

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFALRMAAGNLNLNFHI 120
           ALFPF LR+L+ PPFL++ ++L+FLSSF++  AACD I+ +I+SFAL++AAGN++LNFHI
Sbjct: 63  ALFPFVLRDLQHPPFLSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNVDLNFHI 122

Query: 121 IAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCY 180
           +  VD++  IWVDLDP  L+ + S      APAS +ERL ++++DG   EE    CSVC 
Sbjct: 123 VVEVDVIEMIWVDLDP-FLVEEYSPAEMNGAPASAIERLQRQEFDGLRDEEEEGDCSVCC 182

Query: 181 EDLHGEKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE 223
           E L GE+E++RI CGHVYHK CILKWL+++NSCPLCR +LE+
Sbjct: 183 EALKGEEEVSRIPCGHVYHKCCILKWLQMSNSCPLCRTKLEQ 223

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BLAST of CcUC08G147200 vs. ExPASy Swiss-Prot
Match: P0CH30 (E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV=1)

HSP 1 Score: 65.1 bits (157), Expect = 1.2e-09
Identity = 29/81 (35.80%), Postives = 45/81 (55.56%), Query Frame = 0


Query: 143 DSEPVRKAAP---ASVMERLMKEKYDGNGREETGDQCSVCYEDLHGEKELARISCGHVYH 202
           +++P R   P    S +E L       +      +QC+VC +D     E  ++ C H+YH
Sbjct: 188 ENDPNRYGTPPASKSAIEALPLVNITKSNLNSEFNQCAVCMDDFEEGTEAKQMPCKHLYH 247

Query: 203 KPCILKWLKINNSCPLCRREL 221
           K C+L WL+++NSCP+CR EL
Sbjct: 248 KDCLLPWLELHNSCPVCRHEL 268

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BLAST of CcUC08G147200 vs. ExPASy Swiss-Prot
Match: Q9VHI7 (E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 18/48 (37.50%), Postives = 36/48 (75.00%), Query Frame = 0


Query: 175 QCSVCYEDLHGEKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE 223
           QCS+C++D   ++ + ++ C H+YH+ CI+ WL ++++CP+CR+ L +
Sbjct: 252 QCSICWDDFKIDETVRKLPCSHLYHENCIVPWLNLHSTCPICRKSLAD 299

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BLAST of CcUC08G147200 vs. ExPASy Swiss-Prot
Match: Q8LPN7 (E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19950 PE=1 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 1.7e-08
Identity = 26/81 (32.10%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 143 DSEPVRKAAP---ASVMERLMKEKYDGNGREETGDQCSVCYEDLHGEKELARISCGHVYH 202
           +++P R   P    S ++ L   K   +  +   +QC+VC ++     ++ ++ C HV+H
Sbjct: 180 ENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFH 239

Query: 203 KPCILKWLKINNSCPLCRREL 221
           + C+L WL+++NSCP+CR EL
Sbjct: 240 QDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of CcUC08G147200 vs. ExPASy Swiss-Prot
Match: Q9VE61 (E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN=CG7694 PE=2 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 27/53 (50.94%), Postives = 34/53 (64.15%), Query Frame = 0


Query: 170 EETGD-QCSVCYEDLHGEKELARISCGHVYHKPCILKWLKINNSCPLCRRELE 222
           +E GD +CSVC E     ++   + C H +H+ CIL WLK  NSCPLCR ELE
Sbjct: 63  DEGGDLECSVCKEPAEEGQKYRILPCKHEFHEECILLWLKKTNSCPLCRYELE 115

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BLAST of CcUC08G147200 vs. ExPASy Swiss-Prot
Match: Q94AK4 (E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV=1)

HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08
Identity = 25/70 (35.71%), Postives = 39/70 (55.71%), Query Frame = 0


Query: 151 APASVMERLMKEKYDGNGREETGDQCSVCYEDLHGEKELARISCGHVYHKPCILKWLKIN 210
           AP S ++ L   K      + +   C VC ++   + E  ++ C H+YH  CI+ WL  +
Sbjct: 161 APKSSIDALPTIKITQKHLKSSDSHCPVCKDEFELKSEAKQMPCHHIYHSDCIVPWLVQH 220

Query: 211 NSCPLCRREL 221
           NSCP+CR+EL
Sbjct: 221 NSCPVCRKEL 230

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BLAST of CcUC08G147200 vs. ExPASy TrEMBL
Match: A0A0A0LRB0 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 PE=4 SV=1)

HSP 1 Score: 305.8 bits (782), Expect = 1.4e-79
Identity = 154/225 (68.44%), Postives = 179/225 (79.56%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           MS   + S R  IR + NGS AT+ QPLQFV+LRLG FS+LVL+PSHQILQQTSP LISD
Sbjct: 1   MSSPTTFSFRCSIRCNANGSAATNGQPLQFVELRLGHFSQLVLSPSHQILQQTSPILISD 60

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFALRMAAGNLNLNFHI 120
            L  FPLRELEDPPF++H  L RFLSS+N+S A CDAIF KI+SFA ++ AGNLN NFHI
Sbjct: 61  TLIRFPLRELEDPPFISHSSLCRFLSSYNISDAVCDAIFLKISSFAFQLVAGNLNSNFHI 120

Query: 121 IAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCY 180
           IAA+D V+T WVDLDPA    +D+  VR+ AP S +ERLMKEKYDGNG EE  D+CSVCY
Sbjct: 121 IAALDFVYTHWVDLDPA----EDAAAVRQGAPRSAIERLMKEKYDGNGGEEMEDECSVCY 180

Query: 181 EDLHG----EKELARISCGHVYHKPCILKWLKINNSCPLCRRELE 222
           EDLHG    EKE++RI CGH++HK CILKWLKI+NSCPLCR ELE
Sbjct: 181 EDLHGKTEKEKEVSRIPCGHMFHKSCILKWLKISNSCPLCRGELE 221

[Close]

BLAST of CcUC08G147200 vs. ExPASy TrEMBL
Match: A0A0A0L3Z2 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 3.8e-72
Identity = 149/235 (63.40%), Postives = 176/235 (74.89%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           MS   + S +  IR +   S+ATD QPLQFVQLRL  F +LV  PS QILQQTSPTLISD
Sbjct: 1   MSLPITFSFQCSIRRNGKSSLATDGQPLQFVQLRLRHFGQLVHTPSQQILQQTSPTLISD 60

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFA---LRMAAGNLNLN 120
            L PF L ELEDPPF++++FL RFLSS+++SAA CDAIF+ I+SFA   L  A  N+N+N
Sbjct: 61  TLIPFSLWELEDPPFISYFFLFRFLSSYDISAAVCDAIFYNISSFAGQILLAADSNINVN 120

Query: 121 FHIIAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREET--GDQ 180
           FHIIA VD+V+T WVDLDPA    +D+  VRK A  SV+ER+MKEKYDGNG EE    DQ
Sbjct: 121 FHIIADVDIVYTHWVDLDPA----EDAPAVRKGASTSVIERVMKEKYDGNGGEEKEGDDQ 180

Query: 181 CSVCYEDLHG--------EKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE 223
           CSVCYE L+G        EKE++RI CGH+YHK CILKWLKI+NSCPLCRRELEE
Sbjct: 181 CSVCYEQLYGKRENENEKEKEVSRIPCGHMYHKSCILKWLKISNSCPLCRRELEE 231

[Close]

BLAST of CcUC08G147200 vs. ExPASy TrEMBL
Match: A0A6J1L387 (RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499493 PE=4 SV=1)

HSP 1 Score: 248.4 bits (633), Expect = 2.7e-62
Identity = 120/222 (54.05%), Postives = 164/222 (73.87%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           ++F +SLS ++ IR++  G++A+ + P+QFV+LRLG  S L+   S QILQQ+  T + +
Sbjct: 3   LTFGDSLSFQFSIRTNTTGTLASHEHPMQFVELRLGHSSHLISRSSRQILQQSPSTPLGE 62

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFALRMAAGNLNLNFHI 120
           +LFPF LR+LE PPFL +Y +L FLSSF++  AACD I+ +I+SFALR+ A N++LNFHI
Sbjct: 63  SLFPFILRDLEHPPFLPNYHVLHFLSSFSIPVAACDIIYQEISSFALRLTADNVDLNFHI 122

Query: 121 IAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCY 180
           +  VD +  IWVDLDP  L+ + S P    APAS +ERL ++K+DG   EE    CSVC 
Sbjct: 123 VVDVDAIEMIWVDLDP-FLVEEYSPPAMNGAPASAIERLQRQKFDGLREEEEEGDCSVCC 182

Query: 181 EDLHGEKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE 223
           E L GE+E++RI CGHVYHK CILKWL+I+NSCPLCR +LE+
Sbjct: 183 EALRGEEEVSRIPCGHVYHKCCILKWLQISNSCPLCRTKLEQ 223

[Close]

BLAST of CcUC08G147200 vs. ExPASy TrEMBL
Match: A0A6J1G7Z5 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC111451666 PE=4 SV=1)

HSP 1 Score: 245.4 bits (625), Expect = 2.3e-61
Identity = 119/222 (53.60%), Postives = 167/222 (75.23%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           ++F + LS +  I+S  NG+VA+D QP+Q ++LRLG+ + L+   S QILQQT  T + D
Sbjct: 3   LTFHDYLSFQCSIQSTCNGTVASDQQPMQLLELRLGNSTHLISRSSRQILQQTPTTPMGD 62

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFALRMAAGNLNLNFHI 120
           ALFPF LR+L+ PPFL++ ++L+FLSSF++  AACD I+ +I+SFAL++AAGN++LNFHI
Sbjct: 63  ALFPFVLRDLQHPPFLSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNVDLNFHI 122

Query: 121 IAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCY 180
           +  VD++  IWVDLDP  L+ + S      APAS +ERL ++++DG   EE    CSVC 
Sbjct: 123 VVEVDVIEMIWVDLDP-FLVEEYSPAEMNGAPASAIERLQRQEFDGLREEEEEGDCSVCC 182

Query: 181 EDLHGEKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE 223
           E L GE+E++RI CGHVYHK CILKWL+++NSCPLCR +LE+
Sbjct: 183 EALKGEEEVSRIPCGHVYHKCCILKWLQMSNSCPLCRTKLEQ 223

[Close]

BLAST of CcUC08G147200 vs. ExPASy TrEMBL
Match: A0A6J1KYV1 (E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499496 PE=4 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 2.0e-60
Identity = 120/222 (54.05%), Postives = 164/222 (73.87%), Query Frame = 0


Query: 1   MSFRNSLSLRYWIRSDPNGSVATDDQPLQFVQLRLGSFSELVLAPSHQILQQTSPTLISD 60
           ++F + LS +  I+S  NG+VA+  QP+Q ++LRLG  + L+   S QILQQT  T I D
Sbjct: 3   LTFHDYLSFQCSIQSTCNGTVASGQQPIQLLELRLGHSTHLISRSSRQILQQTPSTPIGD 62

Query: 61  ALFPFPLRELEDPPFLAHYFLLRFLSSFNLSAAACDAIFHKIASFALRMAAGNLNLNFHI 120
           ALFPF LR+L+ PPFL++ ++L+FLSSF++  AACD I+ +I+SFAL++AAGN++LNFHI
Sbjct: 63  ALFPFVLRDLQHPPFLSNCYVLQFLSSFSIPIAACDIIYEEISSFALQLAAGNMDLNFHI 122

Query: 121 IAAVDLVHTIWVDLDPALLLPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCY 180
           +  VD+   IWVDLDP  L+ + S      APAS +ERL ++K+DG   EE    CSVC 
Sbjct: 123 VVEVDVNEMIWVDLDP-FLVEEYSPAEMNGAPASAIERLQRQKFDGLREEEEEGDCSVCC 182

Query: 181 EDLHGEKELARISCGHVYHKPCILKWLKINNSCPLCRRELEE 223
           E L GE+E++RI CGHVYHK CILKWL+++NSCPLCR +LE+
Sbjct: 183 EALKGEEEVSRIPCGHVYHKFCILKWLQMSNSCPLCRTKLEQ 223

[Close]

BLAST of CcUC08G147200 vs. TAIR 10
Match: AT1G60360.1 (RING/U-box superfamily protein )

HSP 1 Score: 67.0 bits (162), Expect = 2.2e-11
Identity = 30/81 (37.04%), Postives = 41/81 (50.62%), Query Frame = 0


Query: 140 LPQDSEPVRKAAPASVMERLMKEKYDGNGREETGDQCSVCYEDLHGEKELARISCGHVYH 199
           L QD  P    A    +  L   K           QC+VC E+     +   + C H+YH
Sbjct: 188 LTQDDRPGPPPASEPTINSLPSVKITPQHLTNDMSQCTVCMEEFIVGGDATELPCKHIYH 247

Query: 200 KPCILKWLKINNSCPLCRREL 221
           K CI+ WL++NNSCP+CRR+L
Sbjct: 248 KDCIVPWLRLNNSCPICRRDL 268

[Close]

BLAST of CcUC08G147200 vs. TAIR 10
Match: AT5G67120.1 (RING/U-box superfamily protein )

HSP 1 Score: 64.7 bits (156), Expect = 1.1e-10
Identity = 25/64 (39.06%), Postives = 40/64 (62.50%), Query Frame = 0


Query: 157 ERLMKEKYDGNGREETGDQCSVCYEDLHGEKELARISCGHVYHKPCILKWLKINNSCPLC 216
           E L++ KY+    +ET  +C +C + L   +E++++ CGH +H  CI  WL + N CPLC
Sbjct: 209 ENLIRRKYEKRSDDET-KRCVICQQKLKDNEEVSKLGCGHDFHFGCIKNWLMVTNKCPLC 268

Query: 217 RREL 221
            RE+
Sbjct: 269 NREV 271

[Close]

BLAST of CcUC08G147200 vs. TAIR 10
Match: AT1G45180.1 (RING/U-box superfamily protein )

HSP 1 Score: 63.2 bits (152), Expect = 3.1e-10
Identity = 25/65 (38.46%), Postives = 40/65 (61.54%), Query Frame = 0


Query: 154 SVMERLMKEKYDGNGR-EETGDQCSVCYEDLHGEKELARISCGHVYHKPCILKWLKINNS 213
           ++  RL ++KY  + R  +  + C VC E+   E+E+ R+ CGH +H  CI +WLK  N 
Sbjct: 569 TISNRLKQQKYKSSTRSSQEVEPCCVCQEEYKEEEEIGRLECGHDFHSQCIKEWLKQKNL 628

Query: 214 CPLCR 218
           CP+C+
Sbjct: 629 CPICK 633

[Close]

BLAST of CcUC08G147200 vs. TAIR 10
Match: AT3G19950.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 26/81 (32.10%), Postives = 48/81 (59.26%), Query Frame = 0


Query: 143 DSEPVRKAAP---ASVMERLMKEKYDGNGREETGDQCSVCYEDLHGEKELARISCGHVYH 202
           +++P R   P    S ++ L   K   +  +   +QC+VC ++     ++ ++ C HV+H
Sbjct: 180 ENDPNRYGTPPASKSAIDALPTVKVTKDMLKSEMNQCAVCMDEFEDGSDVKQMPCKHVFH 239

Query: 203 KPCILKWLKINNSCPLCRREL 221
           + C+L WL+++NSCP+CR EL
Sbjct: 240 QDCLLPWLELHNSCPVCRFEL 260

[Close]

BLAST of CcUC08G147200 vs. TAIR 10
Match: AT4G12210.1 (RING/U-box superfamily protein )

HSP 1 Score: 61.2 bits (147), Expect = 1.2e-09
Identity = 25/50 (50.00%), Postives = 35/50 (70.00%), Query Frame = 0


Query: 174 DQCSVCYEDL-HGEK--ELARISCGHVYHKPCILKWLKINNSCPLCRREL 221
           + CS+C E+L  G K  +L R++C HV+H PC+L+W    N+CPLCR EL
Sbjct: 151 ESCSICLENLVSGPKPSDLTRMTCSHVFHNPCLLEWFMRKNTCPLCRTEL 200

The following BLAST results are available for this feature:

BLAST of CcUC08G147200 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011650219.1	3.0e-79	68.44	RING-H2 finger protein ATL16 [Cucumis sativus] >KGN63362.1 hypothetical protein ...	[more]
XP_031740500.1	7.8e-72	63.40	E3 ubiquitin-protein ligase At1g63170-like [Cucumis sativus]	[more]
XP_023006824.1	5.6e-62	54.05	RING-H2 finger protein ATL16-like [Cucurbita maxima]	[more]
XP_022947933.1	4.8e-61	53.60	E3 ubiquitin-protein ligase RNF126-like [Cucurbita moschata] >XP_023532920.1 E3 ...	[more]
KAG6605221.1	8.1e-61	53.60	E3 ubiquitin-protein ligase, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CcUC08G147200 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P0CH30	1.2e-09	35.80	E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum OX=3635 GN=RING1 PE=1 SV...	[more]
Q9VHI7	1.3e-08	37.50	E3 ubiquitin-protein ligase Iruka OS=Drosophila melanogaster OX=7227 GN=Iru PE=1...	[more]
Q8LPN7	1.7e-08	32.10	E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana OX=3702 GN=At3g19...	[more]
Q9VE61	4.9e-08	50.94	E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila melanogaster OX=7227 GN...	[more]
Q94AK4	4.9e-08	35.71	E3 ubiquitin-protein ligase RZF1 OS=Arabidopsis thaliana OX=3702 GN=RZF1 PE=1 SV...	[more]

BLAST of CcUC08G147200 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LRB0	1.4e-79	68.44	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G432790 P...	[more]
A0A0A0L3Z2	3.8e-72	63.40	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G551140 P...	[more]
A0A6J1L387	2.7e-62	54.05	RING-H2 finger protein ATL16-like OS=Cucurbita maxima OX=3661 GN=LOC111499493 PE...	[more]
A0A6J1G7Z5	2.3e-61	53.60	E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]
A0A6J1KYV1	2.0e-60	54.05	E3 ubiquitin-protein ligase RNF126-like OS=Cucurbita maxima OX=3661 GN=LOC111499...	[more]

BLAST of CcUC08G147200 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G60360.1	2.2e-11	37.04	RING/U-box superfamily protein	[more]
AT5G67120.1	1.1e-10	39.06	RING/U-box superfamily protein	[more]
AT1G45180.1	3.1e-10	38.46	RING/U-box superfamily protein	[more]
AT3G19950.1	1.2e-09	32.10	RING/U-box superfamily protein	[more]
AT4G12210.1	1.2e-09	50.00	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 176..216 e-value: 1.3E-6 score: 37.9
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 174..217 e-value: 5.5E-13 score: 49.1
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 176..217 score: 12.976127
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 152..222 e-value: 2.6E-20 score: 73.4
None	No IPR available	PANTHER	PTHR45931:SF9	E3 UBIQUITIN-PROTEIN LIGASE RNF12-B-LIKE	coord: 80..221
None	No IPR available	PANTHER	PTHR45931	SI:CH211-59O9.10	coord: 80..221
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 175..220

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G147200.1	CcUC08G147200.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
molecular_function	GO:0061630	ubiquitin protein ligase activity