CcUC08G146890 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G146890
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	22.0 kDa class IV heat shock protein
Location	CicolChr08: 4466640 .. 4467206 (-)
RNA-Seq Expression	CcUC08G146890
Synteny	CcUC08G146890

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAAAATTCAAGGCAGTACAAGTCTTCTTGTTCGCAATTTTCATCTCTGCTTTTCTTCTTACCCCATCCGAACCCTCTCTTCTTCCGTTCATCGACCCATTTGGGATTCTGGAACAAACCCCATTTGGGTTACTCGAAAATGAAAACAGAGATGCTCTGCAGCAGCCACTCCCGCCGGCGAGAGTTGACTGGAAAGAGACGCCAGAGAGCCACGTGATCATGCTGGATGTGCCAGGAATGAACAAGGAGGAGATGAAGATCGAATTGGACGAGGAAAACAGGATTCTGAAAGTGATCGGAGAGAGGAAAAGGGAAGAGGAGAAACAGAGTGAGCATTGGCATAGATTGGAACGAAGCTATGGAAAATTCTGGAGGCAGTTTCGACTGCCCAGTAATGCGGATATGGAATCTGTTAAAGCTCAGCTTCAGAATGGGGTTCTTAAGGTGACTTTGTCGAAGCTTTCGCCGGAGAAGATTAAGGGTCCGAGAGTGGTCGGCATTTTGGATGAACAACCGCCGGTCGCGGAGCTGAACAAGTCCGGCGGGCCCAGGCAGGAGCTGTGA

mRNA sequence

ATGGCAAAATTCAAGGCAGTACAAGTCTTCTTGTTCGCAATTTTCATCTCTGCTTTTCTTCTTACCCCATCCGAACCCTCTCTTCTTCCGTTCATCGACCCATTTGGGATTCTGGAACAAACCCCATTTGGGTTACTCGAAAATGAAAACAGAGATGCTCTGCAGCAGCCACTCCCGCCGGCGAGAGTTGACTGGAAAGAGACGCCAGAGAGCCACGTGATCATGCTGGATGTGCCAGGAATGAACAAGGAGGAGATGAAGATCGAATTGGACGAGGAAAACAGGATTCTGAAAGTGATCGGAGAGAGGAAAAGGGAAGAGGAGAAACAGAGTGAGCATTGGCATAGATTGGAACGAAGCTATGGAAAATTCTGGAGGCAGTTTCGACTGCCCAGTAATGCGGATATGGAATCTGTTAAAGCTCAGCTTCAGAATGGGGTTCTTAAGGTGACTTTGTCGAAGCTTTCGCCGGAGAAGATTAAGGGTCCGAGAGTGGTCGGCATTTTGGATGAACAACCGCCGGTCGCGGAGCTGAACAAGTCCGGCGGGCCCAGGCAGGAGCTGTGA

Coding sequence (CDS)

ATGGCAAAATTCAAGGCAGTACAAGTCTTCTTGTTCGCAATTTTCATCTCTGCTTTTCTTCTTACCCCATCCGAACCCTCTCTTCTTCCGTTCATCGACCCATTTGGGATTCTGGAACAAACCCCATTTGGGTTACTCGAAAATGAAAACAGAGATGCTCTGCAGCAGCCACTCCCGCCGGCGAGAGTTGACTGGAAAGAGACGCCAGAGAGCCACGTGATCATGCTGGATGTGCCAGGAATGAACAAGGAGGAGATGAAGATCGAATTGGACGAGGAAAACAGGATTCTGAAAGTGATCGGAGAGAGGAAAAGGGAAGAGGAGAAACAGAGTGAGCATTGGCATAGATTGGAACGAAGCTATGGAAAATTCTGGAGGCAGTTTCGACTGCCCAGTAATGCGGATATGGAATCTGTTAAAGCTCAGCTTCAGAATGGGGTTCTTAAGGTGACTTTGTCGAAGCTTTCGCCGGAGAAGATTAAGGGTCCGAGAGTGGTCGGCATTTTGGATGAACAACCGCCGGTCGCGGAGCTGAACAAGTCCGGCGGGCCCAGGCAGGAGCTGTGA

Protein sequence

MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPVAELNKSGGPRQEL

Homology

[Close]

BLAST of CcUC08G146890 vs. NCBI nr
Match: ADU55793.1 (HSP20.3 [Citrullus lanatus])

HSP 1 Score: 338.2 bits (866), Expect = 4.6e-89
Identity = 171/174 (98.28%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPP 60
           MA FKAVQ+FLFAIFIS+FLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPP
Sbjct: 1   MANFKAVQLFLFAIFISSFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPP 60

Query: 61  ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS 120
           ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS
Sbjct: 61  ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS 120

Query: 121 YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPP 175
           YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPP
Sbjct: 121 YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPP 174

[Close]

BLAST of CcUC08G146890 vs. NCBI nr
Match: XP_008459498.1 (PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo])

HSP 1 Score: 313.2 bits (801), Expect = 1.6e-81
Identity = 156/189 (82.54%), Postives = 173/189 (91.53%), Query Frame = 0


Query: 1   MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDAL-QQPLP 60
           MA+ KA+Q+    +FI AFL+T S+PSLLPFIDPFGILEQTPFGLLENEN+DAL QQPLP
Sbjct: 1   MAESKAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLP 60

Query: 61  PARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLER 120
           PARVDWKET ESH IM+DVPGMNKEE+KIELDEENR+LKVIGERKREEEKQS+HWHRLER
Sbjct: 61  PARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLER 120

Query: 121 SYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPVAELN 180
           SYGKFWRQ RLP NAD+ESVKA+L+NGVLK+TLSKLSPEKIKGPRVVGILDEQPP  E+N
Sbjct: 121 SYGKFWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDEQPPAGEIN 180

Query: 181 KSGGPRQEL 189
           KSG  +QEL
Sbjct: 181 KSGAAKQEL 189

[Close]

BLAST of CcUC08G146890 vs. NCBI nr
Match: XP_038890677.1 (22.0 kDa class IV heat shock protein-like [Benincasa hispida])

HSP 1 Score: 309.7 bits (792), Expect = 1.7e-80
Identity = 161/191 (84.29%), Postives = 171/191 (89.53%), Query Frame = 0


Query: 1   MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQ----Q 60
           MA+ KA+Q     IFI +FL+T S+PSLLPFIDPFGILEQTPFGLLENENRDALQ    Q
Sbjct: 1   MAESKAIQALFSIIFIFSFLVTSSQPSLLPFIDPFGILEQTPFGLLENENRDALQQQQMQ 60

Query: 61  PLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHR 120
           PLPPARVDWKETPESH IMLDVPGMNKEE+KIELDEENRILKVIGERKREEEKQS+HWHR
Sbjct: 61  PLPPARVDWKETPESHQIMLDVPGMNKEELKIELDEENRILKVIGERKREEEKQSDHWHR 120

Query: 121 LERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPVA 180
           +ERSYGKFWRQFRLP NADMESVKAQL NGVLKVTLSKLSPEKI+  RVVGILDEQPP  
Sbjct: 121 MERSYGKFWRQFRLPVNADMESVKAQLSNGVLKVTLSKLSPEKIRS-RVVGILDEQPPEG 180

Query: 181 ELNKSGGPRQE 188
           ELNKSGG RQ+
Sbjct: 181 ELNKSGGARQD 190

[Close]

BLAST of CcUC08G146890 vs. NCBI nr
Match: KAA0039359.1 (22.0 kDa class IV heat shock protein [Cucumis melo var. makuwa] >TYK00542.1 22.0 kDa class IV heat shock protein [Cucumis melo var. makuwa])

HSP 1 Score: 307.4 bits (786), Expect = 8.6e-80
Identity = 154/189 (81.48%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDAL-QQPLP 60
           MA+ KA+Q+    +FI AFL+T S+PSLLPFIDPFGILEQTPFGLLENEN+DAL QQPLP
Sbjct: 1   MAESKAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLP 60

Query: 61  PARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLER 120
           PARVDWKET ESH IM+DVPGMNKEE+KIELDEENR+LKVIGERKREEEKQS+HWHRLER
Sbjct: 61  PARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLER 120

Query: 121 SYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPVAELN 180
           SYGKFWRQ RLP NAD+ESVKA+L+NGVLK+TLSKLSPEKIKGPRVVGILD Q P  E+N
Sbjct: 121 SYGKFWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDGQTPAGEIN 180

Query: 181 KSGGPRQEL 189
           KSG  +QEL
Sbjct: 181 KSGAAKQEL 189

[Close]

BLAST of CcUC08G146890 vs. NCBI nr
Match: XP_004141518.1 (22.0 kDa class IV heat shock protein [Cucumis sativus])

HSP 1 Score: 305.1 bits (780), Expect = 4.3e-79
Identity = 154/189 (81.48%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 1   MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDAL-QQPLP 60
           MA+ KA+Q+    IFI AFLLT S PSLLPFIDPFGILEQTPFGLLENEN+D L QQPLP
Sbjct: 1   MAESKAIQLIFSTIFIFAFLLTSSHPSLLPFIDPFGILEQTPFGLLENENKDVLQQQPLP 60

Query: 61  PARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLER 120
           PARVDWKET ESH IM+DVPGMNKEE+KIELDEENR+LKVIGERKREEEKQS+HWHRLER
Sbjct: 61  PARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLER 120

Query: 121 SYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPVAELN 180
           SYGKFWRQ RLP NAD+ESVKA+L+NGVLK++L KLS EKIKGPRVVGILDEQPP  E+N
Sbjct: 121 SYGKFWRQLRLPVNADLESVKAKLENGVLKISLLKLSQEKIKGPRVVGILDEQPPAGEMN 180

Query: 181 KSGGPRQEL 189
           KSG  +QEL
Sbjct: 181 KSGAAKQEL 189

[Close]

BLAST of CcUC08G146890 vs. ExPASy Swiss-Prot
Match: P30236 (22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1)

HSP 1 Score: 196.4 bits (498), Expect = 2.8e-49
Identity = 99/158 (62.66%), Postives = 121/158 (76.58%), Query Frame = 0


Query: 31  FIDPFGILEQTPFGLLENENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIEL 90
           F DPF +LE  PFG+    ++D     + PARVDWKETPE HVIMLDVPG+ +EE+K+E+
Sbjct: 41  FPDPFRVLEHIPFGV----DKDEASMAMSPARVDWKETPEGHVIMLDVPGLKREEIKVEV 100

Query: 91  DEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKV 150
            EENR+L+V GERK+EEEK+ +HWHR+ERSYGKFWRQFRLP N D++SVKA+L+NGVL +
Sbjct: 101 -EENRVLRVSGERKKEEEKKGDHWHRVERSYGKFWRQFRLPQNVDLDSVKAKLENGVLTL 160

Query: 151 TLSKLSPEKIKGPRVVGILDEQPPVAELNKSGGPRQEL 189
           TL KLSP KIKGPRVV I  E      LN  G  +QEL
Sbjct: 161 TLDKLSPGKIKGPRVVSIAGEDHQQGNLNNDGA-KQEL 192

[Close]

BLAST of CcUC08G146890 vs. ExPASy Swiss-Prot
Match: Q38806 (22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 1.4e-45
Identity = 95/151 (62.91%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 31  FIDPFGILEQTPFGLLENENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIEL 90
           F DPF ILE+ P GL     RD     L PARVDWKET E H IMLD+PG+ K+E+KIE+
Sbjct: 46  FPDPFKILERIPLGL----ERDT-SVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEV 105

Query: 91  DEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKV 150
            EEN +L+V GERKREEEK+ + WHR+ERSYGKFWRQF+LP N DMESVKA+L+NGVL +
Sbjct: 106 -EENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 165

Query: 151 TLSKLSPEKIKGPRVVGILDEQPPVAELNKS 182
            L+KLSPEK+KGPRVV I  E+   A+++ S
Sbjct: 166 NLTKLSPEKVKGPRVVNIAAEEDQTAKISSS 190

[Close]

BLAST of CcUC08G146890 vs. ExPASy Swiss-Prot
Match: P19244 (22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV=1)

HSP 1 Score: 180.3 bits (456), Expect = 2.1e-44
Identity = 97/178 (54.49%), Postives = 129/178 (72.47%), Query Frame = 0


Query: 10  FLFAIFISAFLLTPSEPSLLPFI----------------DPFGILEQTPFGLLENENRDA 69
           FL  I  + F L  ++ SLLPFI                DPF +LEQ P+G+ ++E    
Sbjct: 13  FLLLILAADFPL-KAKASLLPFIDSPNTLLSDLWSDRFPDPFRVLEQIPYGVEKHEPSIT 72

Query: 70  LQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEH 129
           L      ARVDWKETPE HVIM+DVPG+ K+++KIE+ EENR+L+V GERK+EE+K+ +H
Sbjct: 73  LSH----ARVDWKETPEGHVIMVDVPGLKKDDIKIEV-EENRVLRVSGERKKEEDKKGDH 132

Query: 130 WHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDE 172
           WHR+ERSYGKFWRQF+LP N D++SVKA+++NGVL +TL KLS +KIKGPR+V I++E
Sbjct: 133 WHRVERSYGKFWRQFKLPQNVDLDSVKAKMENGVLTLTLHKLSHDKIKGPRMVSIVEE 184

[Close]

BLAST of CcUC08G146890 vs. ExPASy Swiss-Prot
Match: Q7XUW5 (23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 PE=2 SV=2)

HSP 1 Score: 154.5 bits (389), Expect = 1.2e-36
Identity = 80/148 (54.05%), Postives = 107/148 (72.30%), Query Frame = 0


Query: 25  EPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKE 84
           E  LL   DPF ILE  PFG     +RD +   L  ARVDW+ET ++H +++DVPGM KE
Sbjct: 45  ELGLLAAADPFRILEHVPFGF----DRDDVAM-LSMARVDWRETGDAHEVVVDVPGMRKE 104

Query: 85  EMKIELDEENRILKVIGERKREEEKQ----SEHWHRLERSYGKFWRQFRLPSNADMESVK 144
           ++++E+ E+NR+L++ GER+REE  +     +HWHR ERSYG+FWRQ RLP NAD++S+ 
Sbjct: 105 DLRVEV-EDNRVLRISGERRREETTEQKGGGDHWHREERSYGRFWRQLRLPDNADLDSIA 164

Query: 145 AQLQNGVLKVTLSKLSPEKIKGPRVVGI 169
           A L NGVL V   KL+P++IKGPRVVGI
Sbjct: 165 ASLDNGVLTVRFRKLAPDQIKGPRVVGI 186

[Close]

BLAST of CcUC08G146890 vs. ExPASy Swiss-Prot
Match: Q84J50 (17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP17.7 PE=2 SV=1)

HSP 1 Score: 121.3 bits (303), Expect = 1.2e-26
Identity = 68/142 (47.89%), Postives = 90/142 (63.38%), Query Frame = 0


Query: 33  DPFGI-----LEQTPFG----------LLENENRDALQQPLPPARVDWKETPESHVIMLD 92
           DPF +     ++  PFG          L    N DA       AR+DWKETPE HV   D
Sbjct: 11  DPFSLDLWDPVDGFPFGSGGSSSSSGSLFPRANSDA--AAFAGARIDWKETPEVHVFKAD 70

Query: 93  VPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADME 152
           VPG+ KEE+K+E+D+ N IL++ GER RE+E++S+ WHR+ERS GKF R+FRLP N   E
Sbjct: 71  VPGLKKEEVKVEVDDGN-ILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 130

Query: 153 SVKAQLQNGVLKVTLSKLSPEK 160
            +KA ++NGVL VT+ K  P+K
Sbjct: 131 QIKASMENGVLTVTVPKEEPKK 149

[Close]

BLAST of CcUC08G146890 vs. ExPASy TrEMBL
Match: H6TB46 (HSP20.3 OS=Citrullus lanatus OX=3654 PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89
Identity = 171/174 (98.28%), Postives = 173/174 (99.43%), Query Frame = 0


Query: 1   MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPP 60
           MA FKAVQ+FLFAIFIS+FLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPP
Sbjct: 1   MANFKAVQLFLFAIFISSFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPP 60

Query: 61  ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS 120
           ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS
Sbjct: 61  ARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERS 120

Query: 121 YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPP 175
           YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPP
Sbjct: 121 YGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPP 174

[Close]

BLAST of CcUC08G146890 vs. ExPASy TrEMBL
Match: A0A1S3CAU1 (22.0 kDa class IV heat shock protein OS=Cucumis melo OX=3656 GN=LOC103498616 PE=3 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.6e-82
Identity = 156/189 (82.54%), Postives = 173/189 (91.53%), Query Frame = 0


Query: 1   MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDAL-QQPLP 60
           MA+ KA+Q+    +FI AFL+T S+PSLLPFIDPFGILEQTPFGLLENEN+DAL QQPLP
Sbjct: 1   MAESKAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLP 60

Query: 61  PARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLER 120
           PARVDWKET ESH IM+DVPGMNKEE+KIELDEENR+LKVIGERKREEEKQS+HWHRLER
Sbjct: 61  PARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLER 120

Query: 121 SYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPVAELN 180
           SYGKFWRQ RLP NAD+ESVKA+L+NGVLK+TLSKLSPEKIKGPRVVGILDEQPP  E+N
Sbjct: 121 SYGKFWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDEQPPAGEIN 180

Query: 181 KSGGPRQEL 189
           KSG  +QEL
Sbjct: 181 KSGAAKQEL 189

[Close]

BLAST of CcUC08G146890 vs. ExPASy TrEMBL
Match: A0A5A7TDL3 (22.0 kDa class IV heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001530 PE=3 SV=1)

HSP 1 Score: 307.4 bits (786), Expect = 4.2e-80
Identity = 154/189 (81.48%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDAL-QQPLP 60
           MA+ KA+Q+    +FI AFL+T S+PSLLPFIDPFGILEQTPFGLLENEN+DAL QQPLP
Sbjct: 1   MAESKAIQLIFSTVFIFAFLITSSQPSLLPFIDPFGILEQTPFGLLENENKDALQQQPLP 60

Query: 61  PARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLER 120
           PARVDWKET ESH IM+DVPGMNKEE+KIELDEENR+LKVIGERKREEEKQS+HWHRLER
Sbjct: 61  PARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLER 120

Query: 121 SYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPVAELN 180
           SYGKFWRQ RLP NAD+ESVKA+L+NGVLK+TLSKLSPEKIKGPRVVGILD Q P  E+N
Sbjct: 121 SYGKFWRQLRLPVNADLESVKAKLENGVLKITLSKLSPEKIKGPRVVGILDGQTPAGEIN 180

Query: 181 KSGGPRQEL 189
           KSG  +QEL
Sbjct: 181 KSGAAKQEL 189

[Close]

BLAST of CcUC08G146890 vs. ExPASy TrEMBL
Match: A0A0A0KSN3 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G646740 PE=3 SV=1)

HSP 1 Score: 305.1 bits (780), Expect = 2.1e-79
Identity = 154/189 (81.48%), Postives = 169/189 (89.42%), Query Frame = 0


Query: 1   MAKFKAVQVFLFAIFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDAL-QQPLP 60
           MA+ KA+Q+    IFI AFLLT S PSLLPFIDPFGILEQTPFGLLENEN+D L QQPLP
Sbjct: 1   MAESKAIQLIFSTIFIFAFLLTSSHPSLLPFIDPFGILEQTPFGLLENENKDVLQQQPLP 60

Query: 61  PARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLER 120
           PARVDWKET ESH IM+DVPGMNKEE+KIELDEENR+LKVIGERKREEEKQS+HWHRLER
Sbjct: 61  PARVDWKETAESHEIMVDVPGMNKEELKIELDEENRVLKVIGERKREEEKQSDHWHRLER 120

Query: 121 SYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPVAELN 180
           SYGKFWRQ RLP NAD+ESVKA+L+NGVLK++L KLS EKIKGPRVVGILDEQPP  E+N
Sbjct: 121 SYGKFWRQLRLPVNADLESVKAKLENGVLKISLLKLSQEKIKGPRVVGILDEQPPAGEMN 180

Query: 181 KSGGPRQEL 189
           KSG  +QEL
Sbjct: 181 KSGAAKQEL 189

[Close]

BLAST of CcUC08G146890 vs. ExPASy TrEMBL
Match: A0A6J1ID00 (22.0 kDa class IV heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC111471967 PE=3 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 1.8e-62
Identity = 123/175 (70.29%), Postives = 148/175 (84.57%), Query Frame = 0


Query: 14  IFISAFLLTPSEPSLLPFIDPFGILEQTPFGLLENENRDALQQPLPPARVDWKETPESHV 73
           +  +  LLT S  SLLPF DPFGILEQTPF   +NENRDALQ PL P RVDWKETPE HV
Sbjct: 12  LMFTLLLLTSSTASLLPFSDPFGILEQTPFS-FQNENRDALQHPLQPTRVDWKETPERHV 71

Query: 74  IMLDVPGMNKEEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSN 133
           IMLDVPG++K+E+ IELD++NR++KV+GERKRE++KQS+HWHR+ERSYGKFWRQFRLP N
Sbjct: 72  IMLDVPGLSKDELNIELDDQNRVIKVMGERKREDQKQSDHWHRVERSYGKFWRQFRLPRN 131

Query: 134 ADMESVKAQLQNGVLKVTLSKLSPEKIKGPRVVGILDEQPPVAELNKSGGPRQEL 189
           ADMESV+A+L+NGVL VTLSK+SPEK+K P+VV I   + P AE+ KSGG +QEL
Sbjct: 132 ADMESVRARLENGVLTVTLSKVSPEKVKEPKVVSI---EEPRAEMTKSGGAKQEL 182

[Close]

BLAST of CcUC08G146890 vs. TAIR 10
Match: AT4G10250.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 184.1 bits (466), Expect = 1.0e-46
Identity = 95/151 (62.91%), Postives = 116/151 (76.82%), Query Frame = 0


Query: 31  FIDPFGILEQTPFGLLENENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIEL 90
           F DPF ILE+ P GL     RD     L PARVDWKET E H IMLD+PG+ K+E+KIE+
Sbjct: 46  FPDPFKILERIPLGL----ERDT-SVALSPARVDWKETAEGHEIMLDIPGLKKDEVKIEV 105

Query: 91  DEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKV 150
            EEN +L+V GERKREEEK+ + WHR+ERSYGKFWRQF+LP N DMESVKA+L+NGVL +
Sbjct: 106 -EENGVLRVSGERKREEEKKGDQWHRVERSYGKFWRQFKLPDNVDMESVKAKLENGVLTI 165

Query: 151 TLSKLSPEKIKGPRVVGILDEQPPVAELNKS 182
            L+KLSPEK+KGPRVV I  E+   A+++ S
Sbjct: 166 NLTKLSPEKVKGPRVVNIAAEEDQTAKISSS 190

[Close]

BLAST of CcUC08G146890 vs. TAIR 10
Match: AT1G53540.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 120.9 bits (302), Expect = 1.1e-27
Identity = 68/136 (50.00%), Postives = 92/136 (67.65%), Query Frame = 0


Query: 25  EPSLLPFIDPF-GILEQTPFGLLENENRDALQQPLPPARVDWKETPESHVIMLDVPGMNK 84
           +P  L   DPF G L  TP GL      D        A+VDW+ETPE+HV   D+PG+ K
Sbjct: 17  DPFSLDVFDPFEGFL--TPSGLANAPAMDV--AAFTNAKVDWRETPEAHVFKADLPGLRK 76

Query: 85  EEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQL 144
           EE+K+E+++ N IL++ GER  E E++++ WHR+ERS GKF R+FRLP NA ME +KA +
Sbjct: 77  EEVKVEVEDGN-ILQISGERSNENEEKNDKWHRVERSSGKFTRRFRLPENAKMEEIKASM 136

Query: 145 QNGVLKVTLSKLSPEK 160
           +NGVL VT+ K+ PEK
Sbjct: 137 ENGVLSVTVPKV-PEK 146

[Close]

BLAST of CcUC08G146890 vs. TAIR 10
Match: AT2G29500.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 118.6 bits (296), Expect = 5.3e-27
Identity = 60/127 (47.24%), Postives = 86/127 (67.72%), Query Frame = 0


Query: 33  DPFGILEQTPFGLLENENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDE 92
           DPF +    PF  L + +       +  ARVDW+ETPE+HV   D+PG+ KEE+K+E+ E
Sbjct: 18  DPFSLDVWDPFKELTSSSLSRENSAIVNARVDWRETPEAHVFKADLPGLKKEEVKVEI-E 77

Query: 93  ENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTL 152
           E+ +LK+ GER  E+E +++ WHR+ERS G+F R+FRLP N  M+ VKA ++NGVL VT+
Sbjct: 78  EDSVLKISGERHVEKEDKNDTWHRVERSSGQFTRRFRLPENVKMDQVKAAMENGVLTVTV 137

Query: 153 SKLSPEK 160
            K   +K
Sbjct: 138 PKAETKK 143

[Close]

BLAST of CcUC08G146890 vs. TAIR 10
Match: AT5G59720.1 (heat shock protein 18.2 )

HSP 1 Score: 118.6 bits (296), Expect = 5.3e-27
Identity = 60/119 (50.42%), Postives = 85/119 (71.43%), Query Frame = 0


Query: 41  TPFGLLENENRDALQQPLPPARVDWKETPESHVIMLDVPGMNKEEMKIELDEENRILKVI 100
           TP   L N +          ARVDWKETPE+HV   D+PG+ KEE+K+E++++N +L++ 
Sbjct: 32  TPSSALANASTARDVAAFTNARVDWKETPEAHVFKADLPGLKKEEVKVEVEDKN-VLQIS 91

Query: 101 GERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQLQNGVLKVTLSKLSPEK 160
           GER +E E++++ WHR+ER+ GKF R+FRLP NA ME VKA ++NGVL V + K +PEK
Sbjct: 92  GERSKENEEKNDKWHRVERASGKFMRRFRLPENAKMEEVKATMENGVLTVVVPK-APEK 148

[Close]

BLAST of CcUC08G146890 vs. TAIR 10
Match: AT3G46230.1 (heat shock protein 17.4 )

HSP 1 Score: 117.5 bits (293), Expect = 1.2e-26
Identity = 68/136 (50.00%), Postives = 91/136 (66.91%), Query Frame = 0


Query: 25  EPSLLPFIDPF-GILEQTPFGLLENENRDALQQPLPPARVDWKETPESHVIMLDVPGMNK 84
           +P  L   DPF G L  TP GL     +D        A+VDW+ETPE+HV   DVPG+ K
Sbjct: 17  DPFSLDVWDPFEGFL--TP-GLTNAPAKDV--AAFTNAKVDWRETPEAHVFKADVPGLKK 76

Query: 85  EEMKIELDEENRILKVIGERKREEEKQSEHWHRLERSYGKFWRQFRLPSNADMESVKAQL 144
           EE+K+E+++ N IL++ GER  E E++S+ WHR+ERS GKF R+FRLP NA +E VKA +
Sbjct: 77  EEVKVEVEDGN-ILQISGERSSENEEKSDTWHRVERSSGKFMRRFRLPENAKVEEVKASM 136

Query: 145 QNGVLKVTLSKLSPEK 160
           +NGVL VT+ K+   K
Sbjct: 137 ENGVLSVTVPKVQESK 146

The following BLAST results are available for this feature:

BLAST of CcUC08G146890 vs. NCBI nr


Match Name	E-value	Identity	Description
ADU55793.1	4.6e-89	98.28	HSP20.3 [Citrullus lanatus]	[more]
XP_008459498.1	1.6e-81	82.54	PREDICTED: 22.0 kDa class IV heat shock protein [Cucumis melo]	[more]
XP_038890677.1	1.7e-80	84.29	22.0 kDa class IV heat shock protein-like [Benincasa hispida]	[more]
KAA0039359.1	8.6e-80	81.48	22.0 kDa class IV heat shock protein [Cucumis melo var. makuwa] >TYK00542.1 22.0...	[more]
XP_004141518.1	4.3e-79	81.48	22.0 kDa class IV heat shock protein [Cucumis sativus]	[more]

BLAST of CcUC08G146890 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30236	2.8e-49	62.66	22.0 kDa class IV heat shock protein OS=Glycine max OX=3847 GN=HSP22.0 PE=3 SV=1	[more]
Q38806	1.4e-45	62.91	22.0 kDa heat shock protein OS=Arabidopsis thaliana OX=3702 GN=HSP22.0 PE=2 SV=1	[more]
P19244	2.1e-44	54.49	22.7 kDa class IV heat shock protein OS=Pisum sativum OX=3888 GN=HSP22.7 PE=2 SV...	[more]
Q7XUW5	1.2e-36	54.05	23.2 kDa heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=HSP23.2 ...	[more]
Q84J50	1.2e-26	47.89	17.7 kDa class I heat shock protein OS=Oryza sativa subsp. japonica OX=39947 GN=...	[more]

BLAST of CcUC08G146890 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
H6TB46	2.2e-89	98.28	HSP20.3 OS=Citrullus lanatus OX=3654 PE=2 SV=1	[more]
A0A1S3CAU1	7.6e-82	82.54	22.0 kDa class IV heat shock protein OS=Cucumis melo OX=3656 GN=LOC103498616 PE=...	[more]
A0A5A7TDL3	4.2e-80	81.48	22.0 kDa class IV heat shock protein OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A0A0KSN3	2.1e-79	81.48	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G646740 PE=3 S...	[more]
A0A6J1ID00	1.8e-62	70.29	22.0 kDa class IV heat shock protein-like OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of CcUC08G146890 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G10250.1	1.0e-46	62.91	HSP20-like chaperones superfamily protein	[more]
AT1G53540.1	1.1e-27	50.00	HSP20-like chaperones superfamily protein	[more]
AT2G29500.1	5.3e-27	47.24	HSP20-like chaperones superfamily protein	[more]
AT5G59720.1	5.3e-27	50.42	heat shock protein 18.2	[more]
AT3G46230.1	1.2e-26	50.00	heat shock protein 17.4	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002068	Alpha crystallin/Hsp20 domain	PFAM	PF00011	HSP20	coord: 64..168 e-value: 3.2E-28 score: 97.9
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 52..171 score: 26.061831
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 31..167 e-value: 3.2E-36 score: 126.3
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 58..165
IPR031107	Small heat shock protein HSP20	PANTHER	PTHR11527	HEAT-SHOCK PROTEIN 20 FAMILY MEMBER	coord: 27..174
None	No IPR available	PANTHER	PTHR11527:SF267	22.0 KDA HEAT SHOCK PROTEIN	coord: 27..174
None	No IPR available	CDD	cd06472	ACD_ScHsp26_like	coord: 62..154 e-value: 3.39992E-49 score: 152.844
IPR007052	CS domain	PROSITE	PS51203	CS	coord: 58..166 score: 8.728596

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G146890.1	CcUC08G146890.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0051259	protein complex oligomerization
biological_process	GO:0006457	protein folding
biological_process	GO:0009408	response to heat
biological_process	GO:0042542	response to hydrogen peroxide
biological_process	GO:0009651	response to salt stress
molecular_function	GO:0043621	protein self-association
molecular_function	GO:0051082	unfolded protein binding