CcUC08G145840 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G145840
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionRING/U-box superfamily protein
LocationCicolChr08: 1557636 .. 1558295 (+)
RNA-Seq ExpressionCcUC08G145840
SyntenyCcUC08G145840
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAACAATAATAATAATAATAATGAAACTACTTGCAAGATCTGTACGGACGAGAAAGCCTTGGTGGACATGTTCACAAGCGGCGAGTGCTCCCATTTCTTCTGCAAGGATTGCATCTCTATTCACATCGCGGCTAAAGTGGAAGATAATATAGCCAACGTCAAGTGTCCACAACCAGGTTGCGAGACAGTGCTAGAGCCGAACAACTGCCATTCAATCCTTCCCAAAGACGTGTTGGATCTGTGGGGAGATGTGTTATGCGAGGCCGCCATTGTTGGCATCCAAAAACTCTACTGCCCCTTCGTGGACTGCTCGGTGACGCTTATCGATGATGGAGGCGAGGCAGTGACAGAGGCGGAGTGTCCAAGCTGTAAGAGAATGTTCTGCGCCAAGTGTAATGTGGAGTGGCATGGGGAAGTAGAATGCGAGGAGTTTCAAAAGCTGCGTTTGGAGGAAGATGATGATTTCATAGCAATCAAGTTTGCGGAGCAGATGAATTGGAAGAGATGCCCACATTGTAGGATTTATGTGGACAGGATTGAGGGTTGCCCTTATATAAACTGTAGGTGTGGATCTCAATTTTGCTATAGTTGTGGAGATAAGTGGGGCGGCGACCATGCGTGCTCCGAATCTACTGATGCACGTAGGTATCATTAA

mRNA sequence

ATGGCAAACAATAATAATAATAATAATGAAACTACTTGCAAGATCTGTACGGACGAGAAAGCCTTGGTGGACATGTTCACAAGCGGCGAGTGCTCCCATTTCTTCTGCAAGGATTGCATCTCTATTCACATCGCGGCTAAAGTGGAAGATAATATAGCCAACGTCAAGTGTCCACAACCAGGTTGCGAGACAGTGCTAGAGCCGAACAACTGCCATTCAATCCTTCCCAAAGACGTGTTGGATCTGTGGGGAGATGTGTTATGCGAGGCCGCCATTGTTGGCATCCAAAAACTCTACTGCCCCTTCGTGGACTGCTCGGTGACGCTTATCGATGATGGAGGCGAGGCAGTGACAGAGGCGGAGTGTCCAAGCTGTAAGAGAATGTTCTGCGCCAAGTGTAATGTGGAGTGGCATGGGGAAGTAGAATGCGAGGAGTTTCAAAAGCTGCGTTTGGAGGAAGATGATGATTTCATAGCAATCAAGTTTGCGGAGCAGATGAATTGGAAGAGATGCCCACATTGTAGGATTTATGTGGACAGGATTGAGGGTTGCCCTTATATAAACTGTAGGTGTGGATCTCAATTTTGCTATAGTTGTGGAGATAAGTGGGGCGGCGACCATGCGTGCTCCGAATCTACTGATGCACGTAGGTATCATTAA

Coding sequence (CDS)

ATGGCAAACAATAATAATAATAATAATGAAACTACTTGCAAGATCTGTACGGACGAGAAAGCCTTGGTGGACATGTTCACAAGCGGCGAGTGCTCCCATTTCTTCTGCAAGGATTGCATCTCTATTCACATCGCGGCTAAAGTGGAAGATAATATAGCCAACGTCAAGTGTCCACAACCAGGTTGCGAGACAGTGCTAGAGCCGAACAACTGCCATTCAATCCTTCCCAAAGACGTGTTGGATCTGTGGGGAGATGTGTTATGCGAGGCCGCCATTGTTGGCATCCAAAAACTCTACTGCCCCTTCGTGGACTGCTCGGTGACGCTTATCGATGATGGAGGCGAGGCAGTGACAGAGGCGGAGTGTCCAAGCTGTAAGAGAATGTTCTGCGCCAAGTGTAATGTGGAGTGGCATGGGGAAGTAGAATGCGAGGAGTTTCAAAAGCTGCGTTTGGAGGAAGATGATGATTTCATAGCAATCAAGTTTGCGGAGCAGATGAATTGGAAGAGATGCCCACATTGTAGGATTTATGTGGACAGGATTGAGGGTTGCCCTTATATAAACTGTAGGTGTGGATCTCAATTTTGCTATAGTTGTGGAGATAAGTGGGGCGGCGACCATGCGTGCTCCGAATCTACTGATGCACGTAGGTATCATTAA

Protein sequence

MANNNNNNNETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEPNNCHSILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTLIDDGGEAVTEAECPSCKRMFCAKCNVEWHGEVECEEFQKLRLEEDDDFIAIKFAEQMNWKRCPHCRIYVDRIEGCPYINCRCGSQFCYSCGDKWGGDHACSESTDARRYH
Homology
[Close]
BLAST of CcUC08G145840 vs. NCBI nr
Match: XP_004141646.1 (probable E3 ubiquitin-protein ligase ARI3 [Cucumis sativus])

HSP 1 Score: 349.4 bits (895), Expect = 2.3e-92
Identity = 158/219 (72.15%), Postives = 177/219 (80.82%), Query Frame = 0 

Query: 5   NNNNNETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCET 64
           +++   T C ICTD+KALV+MFT+ ECSH FCKDCIS HIAAK+EDNIANVKCPQPGCE 
Sbjct: 3   DDDKTTTNCNICTDDKALVNMFTNHECSHSFCKDCISNHIAAKLEDNIANVKCPQPGCEA 62

Query: 65  VLEPNNCHSILPKDVLDLWGDVLCEAAIVGIQKL-YCPFVDCSVTLIDDGGEAVTEAECP 124
           VL P+ CHS +PK+VLD WG VLCEA I+G  +L YCPF+DCSV LIDDG EA  EAECP
Sbjct: 63  VLHPDVCHSFVPKNVLDRWGYVLCEAFILGNHRLIYCPFMDCSVALIDDGDEATKEAECP 122

Query: 125 SCKRMFCAKCNVEWHGEVECEEFQKLRLEE---DDDFIAIKFAEQMNWKRCPHCRIYVDR 184
            C RMFCAKCNV WHG VECEEFQKL LEE   DD  +AIK AEQ NWKRCPHCR YV+ 
Sbjct: 123 GCNRMFCAKCNVVWHGGVECEEFQKLCLEEKERDDHLLAIKLAEQENWKRCPHCRTYVEM 182

Query: 185 IEGCPYINCRCGSQFCYSCGDKWGGDHACSESTDARRYH 220
           IEGCPYI CRC ++FCYSCG KWGG HAC ES +AR+YH
Sbjct: 183 IEGCPYIICRCRTKFCYSCGAKWGGSHACPESAEARKYH 221

[Close]
BLAST of CcUC08G145840 vs. NCBI nr
Match: KAE8649011.1 (hypothetical protein Csa_009107 [Cucumis sativus])

HSP 1 Score: 342.8 bits (878), Expect = 2.2e-90
Identity = 156/216 (72.22%), Postives = 174/216 (80.56%), Query Frame = 0 

Query: 5   NNNNNETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCET 64
           +++   T C ICTD+KALV+MFT+ ECSH FCKDCIS HIAAK+EDNIANVKCPQPGCE 
Sbjct: 14  DDDKTTTNCNICTDDKALVNMFTNHECSHSFCKDCISNHIAAKLEDNIANVKCPQPGCEA 73

Query: 65  VLEPNNCHSILPKDVLDLWGDVLCEAAIVGIQKL-YCPFVDCSVTLIDDGGEAVTEAECP 124
           VL P+ CHS +PK+VLD WG VLCEA I+G  +L YCPF+DCSV LIDDG EA  EAECP
Sbjct: 74  VLHPDVCHSFVPKNVLDRWGYVLCEAFILGNHRLIYCPFMDCSVALIDDGDEATKEAECP 133

Query: 125 SCKRMFCAKCNVEWHGEVECEEFQKLRLEE---DDDFIAIKFAEQMNWKRCPHCRIYVDR 184
            C RMFCAKCNV WHG VECEEFQKL LEE   DD  +AIK AEQ NWKRCPHCR YV+ 
Sbjct: 134 GCNRMFCAKCNVVWHGGVECEEFQKLCLEEKERDDHLLAIKLAEQENWKRCPHCRTYVEM 193

Query: 185 IEGCPYINCRCGSQFCYSCGDKWGGDHACSESTDAR 217
           IEGCPYI CRC ++FCYSCG KWGG HAC ES +AR
Sbjct: 194 IEGCPYIICRCRTKFCYSCGAKWGGSHACPESAEAR 229

[Close]
BLAST of CcUC08G145840 vs. NCBI nr
Match: KAA0039247.1 (putative E3 ubiquitin-protein ligase RNF217 isoform X2 [Cucumis melo var. makuwa] >TYK00433.1 putative E3 ubiquitin-protein ligase RNF217 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 339.3 bits (869), Expect = 2.4e-89
Identity = 149/218 (68.35%), Postives = 176/218 (80.73%), Query Frame = 0 

Query: 5   NNNNNETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCET 64
           +++   TTC ICTD+KA ++MFT+ ECSH FCKDCIS HIAAK+EDNIANVKCPQ  C+ 
Sbjct: 3   DDDKTTTTCNICTDDKASMNMFTNHECSHSFCKDCISSHIAAKLEDNIANVKCPQTDCQA 62

Query: 65  VLEPNNCHSILPKDVLDLWGDVLCEAAIVGIQKL-YCPFVDCSVTLIDDGGEAVTEAECP 124
           +L P+ CHS +PK++ D WGDVLCEA I+G  +L YCPF+DCSV LIDDG E   EAEC 
Sbjct: 63  LLHPDICHSFIPKNLFDRWGDVLCEAFILGNHRLIYCPFMDCSVALIDDGDEPAKEAECT 122

Query: 125 SCKRMFCAKCNVEWHGEVECEEFQKLRLEED--DDFIAIKFAEQMNWKRCPHCRIYVDRI 184
            C RMFCAKCNV+WH  VECEEFQKL LEE+  DD +A+K AEQ NWKRCPHCRIYV+ I
Sbjct: 123 RCNRMFCAKCNVKWHAGVECEEFQKLCLEENGRDDLLAMKLAEQQNWKRCPHCRIYVEMI 182

Query: 185 EGCPYINCRCGSQFCYSCGDKWGGDHACSESTDARRYH 220
           EGCPY+ CRCG++FCYSCG KWGG HAC ES +AR+YH
Sbjct: 183 EGCPYVICRCGTKFCYSCGAKWGGRHACPESAEARKYH 220

[Close]
BLAST of CcUC08G145840 vs. NCBI nr
Match: XP_030968567.1 (E3 ubiquitin-protein ligase RNF144A-like [Quercus lobata])

HSP 1 Score: 265.0 bits (676), Expect = 5.7e-67
Identity = 104/203 (51.23%), Postives = 143/203 (70.44%), Query Frame = 0 

Query: 9   NETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEP 68
           ++T C IC D K   +MFT+  C+H FC  CIS ++A K++DNI++VKCP P C  +LEP
Sbjct: 90  SQTLCMICMDGKLTGEMFTNNSCTHSFCAGCISQYVATKLQDNISSVKCPDPKCRGLLEP 149

Query: 69  NNCHSILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTLIDDGGEAVTEAECPSCKRM 128
             C  I+P++V D WGD LCE+ I+G QK YCP+ DCS  L+DDGGE VT +ECP C+R+
Sbjct: 150 QCCRDIIPQEVFDRWGDALCESLILGSQKFYCPYKDCSAMLVDDGGEVVTASECPDCRRL 209

Query: 129 FCAKCNVEWHGEVECEEFQKLRLE--EDDDFIAIKFAEQMNWKRCPHCRIYVDRIEGCPY 188
           FCA+C V WH  +EC EFQ +  +  E +D + ++ A++ NW+RCPHC+ YVD+++GC +
Sbjct: 210 FCAQCRVSWHAGIECREFQNINKDEREREDIMVMELAKKKNWRRCPHCKFYVDKVQGCLH 269

Query: 189 INCRCGSQFCYSCGDKWGGDHAC 210
           I CRCG  FCY CG +W   H C
Sbjct: 270 IACRCGFHFCYGCGSEWDEVHQC 292

[Close]
BLAST of CcUC08G145840 vs. NCBI nr
Match: XP_030968608.1 (E3 ubiquitin-protein ligase RNF144A-like [Quercus lobata])

HSP 1 Score: 265.0 bits (676), Expect = 5.7e-67
Identity = 104/202 (51.49%), Postives = 142/202 (70.30%), Query Frame = 0 

Query: 10  ETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEPN 69
           +T C IC D K   +MFT+  C+H FC  CIS ++A K++DNI++VKCP P C  +LEP 
Sbjct: 91  QTLCMICMDGKLTGEMFTNNSCTHSFCAGCISQYVATKLQDNISSVKCPDPKCRGLLEPQ 150

Query: 70  NCHSILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTLIDDGGEAVTEAECPSCKRMF 129
            C  I+P++V D WGD LCE+ I+G QK YCP+ DCS  L+DDGGE VT +ECP C+R+F
Sbjct: 151 CCRDIIPQEVFDRWGDALCESLILGSQKFYCPYKDCSAMLVDDGGEVVTASECPDCRRLF 210

Query: 130 CAKCNVEWHGEVECEEFQKLRLE--EDDDFIAIKFAEQMNWKRCPHCRIYVDRIEGCPYI 189
           CA+C V WH  +EC EFQ +  +  E +D + ++ A++ NW+RCPHC+ YVD+++GC +I
Sbjct: 211 CAQCRVSWHAGIECREFQNINKDEREREDIMVMELAKKKNWRRCPHCKFYVDKVQGCLHI 270

Query: 190 NCRCGSQFCYSCGDKWGGDHAC 210
            CRCG  FCY CG +W   H C
Sbjct: 271 ACRCGFHFCYGCGSEWDEVHQC 292

[Close]
BLAST of CcUC08G145840 vs. ExPASy Swiss-Prot
Match: Q7Z419 (E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens OX=9606 GN=RNF144B PE=1 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 3.8e-21
Identity = 60/196 (30.61%), Postives = 92/196 (46.94%), Query Frame = 0 

Query: 12  TCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIAN-VKCPQPGC--ETVLEP 71
           TCK+C  E++L  M T  EC   FC  C+  ++   + +   + + CP   C     L+ 
Sbjct: 29  TCKLCLCEQSLDKMTTLQECQCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQE 88

Query: 72  NNCHSILPKDVLDLWGDVLCEAAI-VGIQKLYCPFVDCSV---TLIDDGGEAVTEAECPS 131
                ++P D   L+  +  E  + +   + +CP  DC         D G+ V   ECPS
Sbjct: 89  AEIACLVPVDQFQLYQRLKFEREVHLDPYRTWCPVADCQTVCPVASSDPGQPVL-VECPS 148

Query: 132 CKRMFCAKCNVEWHGEVECEEFQKLRLEEDDDFIAIKFAEQMNWKRCPHCRIYVDRIEGC 191
           C   FC+ C   WH EV C + Q + L  +   +    AE    K+CP CR+Y++R EGC
Sbjct: 149 CHLKFCSCCKDAWHAEVSCRDSQPIVLPTEHRALFGTDAE-APIKQCPVCRVYIERNEGC 208

Query: 192 PYINCR-CGSQFCYSC 200
             + C+ C   FC+ C
Sbjct: 209 AQMMCKNCKHTFCWYC 222

[Close]
BLAST of CcUC08G145840 vs. ExPASy Swiss-Prot
Match: A5PK27 (E3 ubiquitin-protein ligase RNF144B OS=Bos taurus OX=9913 GN=RNF144B PE=2 SV=1)

HSP 1 Score: 98.6 bits (244), Expect = 9.3e-20
Identity = 59/198 (29.80%), Postives = 92/198 (46.46%), Query Frame = 0 

Query: 12  TCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIAN-VKCPQPGC--ETVLEP 71
           TCK+C  E++L  M T  EC   FC  C+  ++   + +   + + CP   C     L+ 
Sbjct: 30  TCKLCLCEQSLDKMTTLQECRCIFCTACLKQYMQLAIREGCGSPITCPDMVCLNHGTLQE 89

Query: 72  NNCHSILPKDVLDLWGDVLCEAAI-VGIQKLYCPFVDCSV---TLIDDGGEAVTEAECPS 131
                ++P D   L+  +  E  + +   + +CP  DC         D G+ V   ECPS
Sbjct: 90  AEIACLVPVDQFQLYQRLKFEREVHLDPCRTWCPVADCQTVCPVATSDPGQPVL-VECPS 149

Query: 132 CKRMFCAKCNVEWHGEVECEEFQKLRLEEDDDFIAIKFAEQMN--WKRCPHCRIYVDRIE 191
           C   FC+ C   WH EV C + Q   L  +   +   F  + +   K+CP CR+Y++R E
Sbjct: 150 CHLKFCSCCKDAWHAEVSCRDSQPGILPTEHGTL---FGTETDAPIKQCPVCRVYIERNE 209

Query: 192 GCPYINCR-CGSQFCYSC 200
           GC  + C+ C   FC+ C
Sbjct: 210 GCAQMMCKNCKHTFCWYC 223

[Close]
BLAST of CcUC08G145840 vs. ExPASy Swiss-Prot
Match: Q8TC41 (Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens OX=9606 GN=RNF217 PE=2 SV=4)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19
Identity = 61/223 (27.35%), Postives = 108/223 (48.43%), Query Frame = 0 

Query: 13  CKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGC-----ETVLE 72
           C++C ++K +  +     C    C++C+ ++++A+V+     +KCP   C     ET + 
Sbjct: 263 CRVCLEDKPIKPLPC---CKKAVCEECLKVYLSAQVQLGQVEIKCPITECFEFLEETTVV 322

Query: 73  PNNCH--SILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTLIDDGGEAVTEAECPSC 132
            N  H  SI  K  L+L G +          K +  F            E+  + +CP+C
Sbjct: 323 YNLTHEDSIKYKYFLEL-GRIDSSTKPCPQCKHFTTFKKKGHIPTPSRSESKYKIQCPTC 382

Query: 133 KRMFCAKCNVEWHGEVECEEFQKLRLEEDDDFIAIKFAE----QMNWKRCPHCRIYVDRI 192
           + ++C KC+  WH  V C+E++K      D  +    +E    Q N ++CP C+I++ R 
Sbjct: 383 QFVWCFKCHSPWHEGVNCKEYKK-----GDKLLRHWASEIEHGQRNAQKCPKCKIHIQRT 442

Query: 193 EGCPYINC-RCGSQFCYSCGDKWG-----GDHACSESTDARRY 219
           EGC ++ C +C + FCY CG+++      GDH  + S    +Y
Sbjct: 443 EGCDHMTCSQCNTNFCYRCGERYRQLRFFGDHTSNLSIFGCKY 476

[Close]
BLAST of CcUC08G145840 vs. ExPASy Swiss-Prot
Match: D3YYI7 (Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus OX=10090 GN=Rnf217 PE=3 SV=2)

HSP 1 Score: 97.8 bits (242), Expect = 1.6e-19
Identity = 61/223 (27.35%), Postives = 108/223 (48.43%), Query Frame = 0 

Query: 13  CKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGC-----ETVLE 72
           C++C ++K +  +     C    C++C+ I+++++V+     +KCP   C     ET + 
Sbjct: 236 CRVCLEDKPIKPLPC---CKKAVCEECLKIYLSSQVQLGQVEIKCPVTECFEFLEETTVV 295

Query: 73  PNNCH--SILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTLIDDGGEAVTEAECPSC 132
            N  H  SI  K  L+L G +          K +  F            E+  + +CP+C
Sbjct: 296 YNLTHEDSIKYKYFLEL-GRIDSSTKPCPQCKHFTTFKKKGHIPTPSRSESRYKIQCPTC 355

Query: 133 KRMFCAKCNVEWHGEVECEEFQKLRLEEDDDFIAIKFAE----QMNWKRCPHCRIYVDRI 192
           + ++C KC+  WH  V C+E++K      D  +    +E    Q N ++CP C+I++ R 
Sbjct: 356 QLIWCFKCHSPWHEGVNCKEYKK-----GDKLLRHWASEIEHGQRNAQKCPKCKIHIQRT 415

Query: 193 EGCPYINC-RCGSQFCYSCGDKWG-----GDHACSESTDARRY 219
           EGC ++ C +C + FCY CG+++      GDH  + S    +Y
Sbjct: 416 EGCDHMTCSQCNTNFCYRCGERYRQLRFFGDHTSNLSIFGCKY 449

[Close]
BLAST of CcUC08G145840 vs. ExPASy Swiss-Prot
Match: Q8BKD6 (E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 GN=Rnf144b PE=2 SV=2)

HSP 1 Score: 97.1 bits (240), Expect = 2.7e-19
Identity = 59/196 (30.10%), Postives = 87/196 (44.39%), Query Frame = 0 

Query: 12  TCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIAN-VKCPQPGC--ETVLEP 71
           TCK+C  E++L  M    EC   FC  C+  ++   + +   + + CP   C     L+ 
Sbjct: 29  TCKLCLCEQSLDKMTMLQECQCIFCTPCLKQYMVLSIREGCGSPITCPDMVCLNHGTLQE 88

Query: 72  NNCHSILPKDVLDLWGDVLCEAAI-VGIQKLYCPFVDCSVTL---IDDGGEAVTEAECPS 131
                ++P D   L+  +  E  + +   + +CP  DC         D G+ V   ECPS
Sbjct: 89  TEIACLVPLDEFQLYQRLKFEREVHMDPLRTWCPVADCQTVCHISAGDPGQPVL-VECPS 148

Query: 132 CKRMFCAKCNVEWHGEVECEEFQKLRLEEDDDFIAIKFAEQMNWKRCPHCRIYVDRIEGC 191
           C   FC+ C   WH E  C + Q    E    F     A     K+CP CRIY++R EGC
Sbjct: 149 CHLKFCSCCKDAWHEESSCRDSQSAMPEHGALFGTDADAP---IKQCPVCRIYIERNEGC 208

Query: 192 PYINCR-CGSQFCYSC 200
             + C+ C   FC+ C
Sbjct: 209 AQMMCKNCKHTFCWYC 220

[Close]
BLAST of CcUC08G145840 vs. ExPASy TrEMBL
Match: A0A0A0KSV5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650600 PE=3 SV=1)

HSP 1 Score: 349.4 bits (895), Expect = 1.1e-92
Identity = 158/219 (72.15%), Postives = 177/219 (80.82%), Query Frame = 0 

Query: 5   NNNNNETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCET 64
           +++   T C ICTD+KALV+MFT+ ECSH FCKDCIS HIAAK+EDNIANVKCPQPGCE 
Sbjct: 3   DDDKTTTNCNICTDDKALVNMFTNHECSHSFCKDCISNHIAAKLEDNIANVKCPQPGCEA 62

Query: 65  VLEPNNCHSILPKDVLDLWGDVLCEAAIVGIQKL-YCPFVDCSVTLIDDGGEAVTEAECP 124
           VL P+ CHS +PK+VLD WG VLCEA I+G  +L YCPF+DCSV LIDDG EA  EAECP
Sbjct: 63  VLHPDVCHSFVPKNVLDRWGYVLCEAFILGNHRLIYCPFMDCSVALIDDGDEATKEAECP 122

Query: 125 SCKRMFCAKCNVEWHGEVECEEFQKLRLEE---DDDFIAIKFAEQMNWKRCPHCRIYVDR 184
            C RMFCAKCNV WHG VECEEFQKL LEE   DD  +AIK AEQ NWKRCPHCR YV+ 
Sbjct: 123 GCNRMFCAKCNVVWHGGVECEEFQKLCLEEKERDDHLLAIKLAEQENWKRCPHCRTYVEM 182

Query: 185 IEGCPYINCRCGSQFCYSCGDKWGGDHACSESTDARRYH 220
           IEGCPYI CRC ++FCYSCG KWGG HAC ES +AR+YH
Sbjct: 183 IEGCPYIICRCRTKFCYSCGAKWGGSHACPESAEARKYH 221

[Close]
BLAST of CcUC08G145840 vs. ExPASy TrEMBL
Match: A0A5A7TCD1 (Putative E3 ubiquitin-protein ligase RNF217 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G00360 PE=3 SV=1)

HSP 1 Score: 339.3 bits (869), Expect = 1.2e-89
Identity = 149/218 (68.35%), Postives = 176/218 (80.73%), Query Frame = 0 

Query: 5   NNNNNETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCET 64
           +++   TTC ICTD+KA ++MFT+ ECSH FCKDCIS HIAAK+EDNIANVKCPQ  C+ 
Sbjct: 3   DDDKTTTTCNICTDDKASMNMFTNHECSHSFCKDCISSHIAAKLEDNIANVKCPQTDCQA 62

Query: 65  VLEPNNCHSILPKDVLDLWGDVLCEAAIVGIQKL-YCPFVDCSVTLIDDGGEAVTEAECP 124
           +L P+ CHS +PK++ D WGDVLCEA I+G  +L YCPF+DCSV LIDDG E   EAEC 
Sbjct: 63  LLHPDICHSFIPKNLFDRWGDVLCEAFILGNHRLIYCPFMDCSVALIDDGDEPAKEAECT 122

Query: 125 SCKRMFCAKCNVEWHGEVECEEFQKLRLEED--DDFIAIKFAEQMNWKRCPHCRIYVDRI 184
            C RMFCAKCNV+WH  VECEEFQKL LEE+  DD +A+K AEQ NWKRCPHCRIYV+ I
Sbjct: 123 RCNRMFCAKCNVKWHAGVECEEFQKLCLEENGRDDLLAMKLAEQQNWKRCPHCRIYVEMI 182

Query: 185 EGCPYINCRCGSQFCYSCGDKWGGDHACSESTDARRYH 220
           EGCPY+ CRCG++FCYSCG KWGG HAC ES +AR+YH
Sbjct: 183 EGCPYVICRCGTKFCYSCGAKWGGRHACPESAEARKYH 220

[Close]
BLAST of CcUC08G145840 vs. ExPASy TrEMBL
Match: A0A7N2LM99 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.8e-67
Identity = 104/203 (51.23%), Postives = 143/203 (70.44%), Query Frame = 0 

Query: 9   NETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEP 68
           ++T C IC D K   +MFT+  C+H FC  CIS ++A K++DNI++VKCP P C  +LEP
Sbjct: 90  SQTLCMICMDGKLTGEMFTNNSCTHSFCAGCISQYVATKLQDNISSVKCPDPKCRGLLEP 149

Query: 69  NNCHSILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTLIDDGGEAVTEAECPSCKRM 128
             C  I+P++V D WGD LCE+ I+G QK YCP+ DCS  L+DDGGE VT +ECP C+R+
Sbjct: 150 QCCRDIIPQEVFDRWGDALCESLILGSQKFYCPYKDCSAMLVDDGGEVVTASECPDCRRL 209

Query: 129 FCAKCNVEWHGEVECEEFQKLRLE--EDDDFIAIKFAEQMNWKRCPHCRIYVDRIEGCPY 188
           FCA+C V WH  +EC EFQ +  +  E +D + ++ A++ NW+RCPHC+ YVD+++GC +
Sbjct: 210 FCAQCRVSWHAGIECREFQNINKDEREREDIMVMELAKKKNWRRCPHCKFYVDKVQGCLH 269

Query: 189 INCRCGSQFCYSCGDKWGGDHAC 210
           I CRCG  FCY CG +W   H C
Sbjct: 270 IACRCGFHFCYGCGSEWDEVHQC 292

[Close]
BLAST of CcUC08G145840 vs. ExPASy TrEMBL
Match: A0A7N2R445 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.8e-67
Identity = 104/202 (51.49%), Postives = 142/202 (70.30%), Query Frame = 0 

Query: 10  ETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEPN 69
           +T C IC D K   +MFT+  C+H FC  CIS ++A K++DNI++VKCP P C  +LEP 
Sbjct: 91  QTLCMICMDGKLTGEMFTNNSCTHSFCAGCISQYVATKLQDNISSVKCPDPKCRGLLEPQ 150

Query: 70  NCHSILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTLIDDGGEAVTEAECPSCKRMF 129
            C  I+P++V D WGD LCE+ I+G QK YCP+ DCS  L+DDGGE VT +ECP C+R+F
Sbjct: 151 CCRDIIPQEVFDRWGDALCESLILGSQKFYCPYKDCSAMLVDDGGEVVTASECPDCRRLF 210

Query: 130 CAKCNVEWHGEVECEEFQKLRLE--EDDDFIAIKFAEQMNWKRCPHCRIYVDRIEGCPYI 189
           CA+C V WH  +EC EFQ +  +  E +D + ++ A++ NW+RCPHC+ YVD+++GC +I
Sbjct: 211 CAQCRVSWHAGIECREFQNINKDEREREDIMVMELAKKKNWRRCPHCKFYVDKVQGCLHI 270

Query: 190 NCRCGSQFCYSCGDKWGGDHAC 210
            CRCG  FCY CG +W   H C
Sbjct: 271 ACRCGFHFCYGCGSEWDEVHQC 292

[Close]
BLAST of CcUC08G145840 vs. ExPASy TrEMBL
Match: A0A5A7UED3 (E3 ubiquitin-protein ligase RNF144B-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold522G00700 PE=3 SV=1)

HSP 1 Score: 258.1 bits (658), Expect = 3.4e-65
Identity = 118/221 (53.39%), Postives = 150/221 (67.87%), Query Frame = 0 

Query: 5   NNNNNETTCKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCET 64
           +++ ++  C ICTD K+   MFT+  C+H FC DCIS HIAAK+E  +A VKCP+P C T
Sbjct: 48  HSSTSQVLCSICTDAKSHSQMFTNRVCTHTFCTDCISKHIAAKLEVTMA-VKCPEPNCGT 107

Query: 65  VLEPNNCHSILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTLIDDGG-EAVTEAECP 124
           VLEP  C S +PK VL+ W D L EA I+  ++L CPF DC   +ID+G  E VT  EC 
Sbjct: 108 VLEPEMCGSFVPKRVLERWADALFEAMILKSKRLNCPFKDCGAAMIDEGDEEGVTAVECG 167

Query: 125 SCKRMFCAKCNVEWHGEVECEEFQKLRLE-----EDDDFIAIKFAEQMNWKRCPHCRIYV 184
           SC R+FCA+C V WHGE++C EFQ+LR E     + DD + +K AE   W+RCPHC+IYV
Sbjct: 168 SCWRLFCAECRVGWHGEMKCGEFQRLRKEAGVSGDKDDAMTVKLAENKKWRRCPHCKIYV 227

Query: 185 DRIEGCPYINCRCGSQFCYSCGDKWGGDHACSESTDARRYH 220
           ++  GC +I CRCGS+FCYSCG KWGG HAC  S   R  H
Sbjct: 228 EKTVGCVHILCRCGSEFCYSCGGKWGGAHACRGSAYERTVH 267

[Close]
BLAST of CcUC08G145840 vs. TAIR 10
Match: AT3G53690.1 (RING/U-box superfamily protein )

HSP 1 Score: 232.3 bits (591), Expect = 3.8e-61
Identity = 92/191 (48.17%), Postives = 130/191 (68.06%), Query Frame = 0 

Query: 13  CKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEPNNCH 72
           C+IC D K++++ F  G CSHF+C DC+S +IAAK++DNI +++CP  GC   LEP+ C 
Sbjct: 115 CEICVDSKSIIESFRIGGCSHFYCNDCVSKYIAAKLQDNILSIECPVSGCSGRLEPDQCR 174

Query: 73  SILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCS-VTLIDDGGEAVTEAECPSCKRMFCA 132
            ILPK+V D WGD LCEA ++  +K YCP+ DCS +  +++    + ++ECP C RM C 
Sbjct: 175 QILPKEVFDRWGDALCEAVVMRSKKFYCPYKDCSALVFLEESEVKMKDSECPHCHRMVCV 234

Query: 133 KCNVEWHGEVECEEFQKLRLEE--DDDFIAIKFAEQMNWKRCPHCRIYVDRIEGCPYINC 192
           +C  +WH E+ CEEFQKL   E   DD +    A+Q  WKRCP C+ Y+++ +GC Y+ C
Sbjct: 235 ECGTQWHPEMTCEEFQKLAANERGRDDILLATMAKQKKWKRCPSCKFYIEKSQGCLYMKC 294

Query: 193 RCGSQFCYSCG 201
           RCG  FCY+CG
Sbjct: 295 RCGLAFCYNCG 305

[Close]
BLAST of CcUC08G145840 vs. TAIR 10
Match: AT3G14250.1 (RING/U-box superfamily protein )

HSP 1 Score: 222.6 bits (566), Expect = 3.0e-58
Identity = 90/205 (43.90%), Postives = 127/205 (61.95%), Query Frame = 0 

Query: 13  CKICTDEKALVDMFT-SGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEPNNC 72
           C IC DEK   D+F  +  C+H +C DC   ++A K+++N + +KCP   C  ++EP  C
Sbjct: 95  CMICMDEKPSSDIFRGTTNCTHAYCTDCTVRYVATKIKENASRIKCPDVECTRLIEPYTC 154

Query: 73  HSILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTLI--DDGGEAVTEAECPSCKRMF 132
             ++PKDV D W  +LCE+ I    K YCPF DCS  ++  ++G   VT+ EC SC R+F
Sbjct: 155 RDLIPKDVFDRWEKILCESLISSWDKFYCPFKDCSAMMVNNENGDANVTQTECRSCHRLF 214

Query: 133 CAKCNVEWHGEVECEEFQ-----KLRLEEDDDFIAIKFAEQMNWKRCPHCRIYVDRIEGC 192
           C +C V WH  + C+EFQ     K +  ++DD + I+ A+   W+RCP C+ YVD++EGC
Sbjct: 215 CVQCKVTWHAGIGCDEFQRFGNTKKKSSDEDDALLIQMAKNKQWRRCPSCKFYVDKVEGC 274

Query: 193 PYINCRCGSQFCYSCGDKWGGDHAC 210
            +I CRCG QFCY CG  W   HAC
Sbjct: 275 QHIKCRCGYQFCYGCGSVWSSSHAC 299

[Close]
BLAST of CcUC08G145840 vs. TAIR 10
Match: AT5G60250.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 143.7 bits (361), Expect = 1.8e-34
Identity = 67/203 (33.00%), Postives = 104/203 (51.23%), Query Frame = 0 

Query: 13  CKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEPNNCH 72
           C IC ++     MF+  +C H FC  C+  H+  K+   +A  KCP  GC++ L  + C 
Sbjct: 301 CAICFNDIVAEGMFSVDKCRHRFCFQCVKQHVEVKLLHGMA-PKCPHDGCKSELVIDACG 360

Query: 73  SILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSV----TLIDDGGEAVTE-------AE 132
            +L   +  LW   L E AI   +++YCP+  CS     T I +  +++           
Sbjct: 361 KLLTPKLSKLWQQRLQENAIPVTERVYCPYPRCSALMSKTKISESAKSLLSLYPKSGVRR 420

Query: 133 CPSCKRMFCAKCNVEWHGEVECEEFQKLRLEEDDDFIAIK-FAEQMNWKRCPHCRIYVDR 192
           C  C+ +FC  C V WHG + C E++KL  E   D + +K  A    W++C  C+  ++ 
Sbjct: 421 CVECRGLFCVDCKVPWHGNLSCTEYKKLHPEPPADDVKLKSLANNKMWRQCGKCQHMIEL 480

Query: 193 IEGCPYINCRCGSQFCYSCGDKW 204
            +GC +I CRCG +FCY+CG  W
Sbjct: 481 SQGCNHITCRCGHEFCYNCGGGW 502

[Close]
BLAST of CcUC08G145840 vs. TAIR 10
Match: AT4G19670.1 (RING/U-box superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 5.2e-34
Identity = 70/215 (32.56%), Postives = 109/215 (50.70%), Query Frame = 0 

Query: 13  CKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEPNNCH 72
           C IC +++   +M  S +C+H FC  C+  ++  KV+ +   ++CPQ  C+  L    C 
Sbjct: 207 CSICCEDRQ-SEMMLSLKCTHKFCSHCMKTYVEGKVKTSEVPIRCPQVQCKHYLSAAECK 266

Query: 73  SILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTL-----IDDGGEAVTEA------- 132
           S LP      + +    +   G  K+YCP+ +CS  L     +  G  + + +       
Sbjct: 267 SFLPVTTFKSFEEANVCSKNNG--KIYCPYPNCSFLLDPQECLSSGRASSSSSTQSENSC 326

Query: 133 --ECPSCKRMFCAKCNVEWHGEVECEEFQKLRLEE--DDDFIAIKFAEQMNWKRCPHCRI 192
             ECP C+R  C  C V WH  + CEEFQ L ++E   DD    + A    W+RC  CRI
Sbjct: 327 CVECPVCERFVCVDCGVPWHASMSCEEFQILPVDERYPDDITLHRLARYKRWRRCQQCRI 386

Query: 193 YVDRIEGCPYINCRCGSQFCYSCGDKW-GGDHACS 211
            ++  +GC ++ CRCG +FCYSCG ++  G   C+
Sbjct: 387 MIELAQGCNHMTCRCGHEFCYSCGAEYREGQQTCT 418

[Close]
BLAST of CcUC08G145840 vs. TAIR 10
Match: AT4G19670.2 (RING/U-box superfamily protein )

HSP 1 Score: 142.1 bits (357), Expect = 5.2e-34
Identity = 70/215 (32.56%), Postives = 109/215 (50.70%), Query Frame = 0 

Query: 13  CKICTDEKALVDMFTSGECSHFFCKDCISIHIAAKVEDNIANVKCPQPGCETVLEPNNCH 72
           C IC +++   +M  S +C+H FC  C+  ++  KV+ +   ++CPQ  C+  L    C 
Sbjct: 207 CSICCEDRQ-SEMMLSLKCTHKFCSHCMKTYVEGKVKTSEVPIRCPQVQCKHYLSAAECK 266

Query: 73  SILPKDVLDLWGDVLCEAAIVGIQKLYCPFVDCSVTL-----IDDGGEAVTEA------- 132
           S LP      + +    +   G  K+YCP+ +CS  L     +  G  + + +       
Sbjct: 267 SFLPVTTFKSFEEANVCSKNNG--KIYCPYPNCSFLLDPQECLSSGRASSSSSTQSENSC 326

Query: 133 --ECPSCKRMFCAKCNVEWHGEVECEEFQKLRLEE--DDDFIAIKFAEQMNWKRCPHCRI 192
             ECP C+R  C  C V WH  + CEEFQ L ++E   DD    + A    W+RC  CRI
Sbjct: 327 CVECPVCERFVCVDCGVPWHASMSCEEFQILPVDERYPDDITLHRLARYKRWRRCQQCRI 386

Query: 193 YVDRIEGCPYINCRCGSQFCYSCGDKW-GGDHACS 211
            ++  +GC ++ CRCG +FCYSCG ++  G   C+
Sbjct: 387 MIELAQGCNHMTCRCGHEFCYSCGAEYREGQQTCT 418

The following BLAST results are available for this feature:
BLAST of CcUC08G145840 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_004141646.12.3e-9272.15probable E3 ubiquitin-protein ligase ARI3 [Cucumis sativus][more]
KAE8649011.12.2e-9072.22hypothetical protein Csa_009107 [Cucumis sativus][more]
KAA0039247.12.4e-8968.35putative E3 ubiquitin-protein ligase RNF217 isoform X2 [Cucumis melo var. makuwa... [more]
XP_030968567.15.7e-6751.23E3 ubiquitin-protein ligase RNF144A-like [Quercus lobata][more]
XP_030968608.15.7e-6751.49E3 ubiquitin-protein ligase RNF144A-like [Quercus lobata][more]
BLAST of CcUC08G145840 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q7Z4193.8e-2130.61E3 ubiquitin-protein ligase RNF144B OS=Homo sapiens OX=9606 GN=RNF144B PE=1 SV=1[more]
A5PK279.3e-2029.80E3 ubiquitin-protein ligase RNF144B OS=Bos taurus OX=9913 GN=RNF144B PE=2 SV=1[more]
Q8TC411.2e-1927.35Probable E3 ubiquitin-protein ligase RNF217 OS=Homo sapiens OX=9606 GN=RNF217 PE... [more]
D3YYI71.6e-1927.35Probable E3 ubiquitin-protein ligase RNF217 OS=Mus musculus OX=10090 GN=Rnf217 P... [more]
Q8BKD62.7e-1930.10E3 ubiquitin-protein ligase RNF144B OS=Mus musculus OX=10090 GN=Rnf144b PE=2 SV=... [more]
BLAST of CcUC08G145840 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KSV51.1e-9272.15Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650600 PE=3 SV=1[more]
A0A5A7TCD11.2e-8968.35Putative E3 ubiquitin-protein ligase RNF217 isoform X2 OS=Cucumis melo var. maku... [more]
A0A7N2LM992.8e-6751.23Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1[more]
A0A7N2R4452.8e-6751.49Uncharacterized protein OS=Quercus lobata OX=97700 PE=3 SV=1[more]
A0A5A7UED33.4e-6553.39E3 ubiquitin-protein ligase RNF144B-like protein OS=Cucumis melo var. makuwa OX=... [more]
BLAST of CcUC08G145840 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G53690.13.8e-6148.17RING/U-box superfamily protein [more]
AT3G14250.13.0e-5843.90RING/U-box superfamily protein [more]
AT5G60250.11.8e-3433.00zinc finger (C3HC4-type RING finger) family protein [more]
AT4G19670.15.2e-3432.56RING/U-box superfamily protein [more]
AT4G19670.25.2e-3432.56RING/U-box superfamily protein [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002867IBR domainSMARTSM00647ibrneu5coord: 81..143
e-value: 3.9E-11
score: 53.0
coord: 152..209
e-value: 0.14
score: 11.3
IPR002867IBR domainPFAMPF01485IBRcoord: 97..143
e-value: 5.2E-9
score: 36.2
coord: 160..209
e-value: 4.2E-7
score: 30.1
NoneNo IPR availableGENE3D1.20.120.1750coord: 141..219
e-value: 8.3E-16
score: 60.6
NoneNo IPR availablePANTHERPTHR11685:SF309RBR-TYPE E3 UBIQUITIN TRANSFERASEcoord: 10..209
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 88..148
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 156..209
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 7..90
IPR013083Zinc finger, RING/FYVE/PHD-typeGENE3D3.30.40.10Zinc/RING finger domain, C3HC4 (zinc finger)coord: 6..94
e-value: 2.9E-21
score: 77.2
IPR031127E3 ubiquitin ligase RBR familyPANTHERPTHR11685RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAININGcoord: 10..209
IPR017907Zinc finger, RING-type, conserved sitePROSITEPS00518ZF_RING_1coord: 31..40
IPR001841Zinc finger, RING-typePROSITEPS50089ZF_RING_2coord: 13..58
score: 9.405901
IPR044066TRIAD supradomainPROSITEPS51873TRIADcoord: 9..218
score: 25.984949

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G145840.1CcUC08G145840.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0032436 positive regulation of proteasomal ubiquitin-dependent protein catabolic process
biological_process GO:0000209 protein polyubiquitination
biological_process GO:0016567 protein ubiquitination
cellular_component GO:0005737 cytoplasm
cellular_component GO:0000151 ubiquitin ligase complex
molecular_function GO:0046872 metal ion binding
molecular_function GO:0031624 ubiquitin conjugating enzyme binding
molecular_function GO:0061630 ubiquitin protein ligase activity
molecular_function GO:0004842 ubiquitin-protein transferase activity