CcUC08G145800 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC08G145800
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Agamous-like MADS-box protein AGL12
Location	CicolChr08: 1496541 .. 1498418 (-)
RNA-Seq Expression	CcUC08G145800
Synteny	CcUC08G145800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TAAAAAGGAAAGAAAATGGAGGAGGAAGAGAAGTATAAGAAGGGGTTTAGAATGGGATAGAGTGGTTTAATTAAGGAATTAAGTTGGTGAGTTTTAGAAGAAGAATTATTATTATTATTATTATTATTGCAGCGACCTGAAGCTAGTTCAAACTAGTGGAAGGTTGTGTGCTGGGGTTGGAAAGGTTTATTAATTATGGCTCGTGGGAAGGTTCAAATGAAGAGGATTGAGAATCCAGTGCATAGACAAGTTACTTTCTGTAAGCGTCGAGCTGGTCTCCTTAAGAAGGCTAAGGAGCTCTCTGTCCTTTGCGATGCTCAAATTGGAGTTTTCATTTTCTCTGCTCATGGAAAGCTCTATGAACTTGCCACTAAAGGGTATATTTTTCATTACCTCCCATACAATTCCTAATATTTTTTTTTTTAATTTTATTAATTGAGTAATACGTACTTGGGTGAAAGTCTATCCACGATTGTGATATACTCGACTCACACAACTAGATTTCACTTTTGCTATATCTATGAACTCTTTTGCATTGTGTTATATCTACGTATTGGATTTCACATGTCGATCTGTCACTAAGTAAAGACATGTATTACTGTTCTTAAAATGAGAGTGGTTGGATTGATCATGTATATCACATTTGACATTAAAAAAAAAAAAAAAAGCGCTTTGGTGGTGTATAGAATATATGTATATATTCTTCTTTGAGTATTGGTTTGATTTCTGTGTCTCATTCCATGTTGGAGGATATAGAACCATGCAAGGGCTTATTGAAAGGTACATGAAGCACACCAATGGGAATCAGCCACCAGACCCACCTATTGATCACCAAACTCTGGTACACTCTCTCTCCTTTTTCTTATTTTAATTTGATATGACAAAAGGGTCAATTGTTTTTTCTATGGATAACAACCATATATTACTAATGAAATCAAATTTGCACTCCCACTATAATTCTTTTTAAATTGTTAAGTTAAAATACAGAATACAAAGAAAAGAAAGGCATCTCCCAAACAAAAGGTCCTTAGTTTTTTAAGTGAATTTTGTTTACAAGTGATATGCTGAATCTGATGCTACTTCTATATATATTTTTATATATATATGTTTACAAAATTTTAAAACTAAACAAAGAACGGCTTTAAAAATAAGAAAACAAATATAATCCTGTTTTTTTTATTTCTTTTCTGATTTTCATTTTCTTTTAAAAACAAGAAAGCAAAAACCATACATTTTTATAGTCGTTTTAAATTTTGTGTTTCTAGAAACTAGAAAGCAACGGAGTATTATAAACATATAACTATTTCTCTTTTTTTTTTTTTTTTTATTTTTTTATTTAAAAAAAAAAAAAAAAAAATTATATATTTATAAAAATCTGTTTTTTTTTTTTTTTTTTATAATCTTTTTGAAATTAGAAAGTCAAAGAGATATGTTAGAAGGGTAAAAAATATGTGAAGATATGAAAATAAAAACTTCATAAAAGATAATTTTATTTAAGGCAAAGTTAAAAAGAGTAGATTTGAAAAGATTAAAAAACTATATTTAGACCTCATTATTAATTTCTTTTTTATTTTAAAAAATTGGACTTGTTTTCTTACATCATATTTTATAATAGTTTGCATCTTTCATAAAAATGATTTTTTTAGGTATCTTTTAGGAAAGAAAACAAAGAAATCAATTAATGGGAGGGAATAGTGTTTATAAATTCATTTTTAAAATCTAAATAATTATTGTCGGGAACTTAGTATTTTGTATTTGTTTTTTTTTTCAATGAACAGAAAATATATTTCCATACCTGTTTTTGGTTTTATCTAGGAAGTAAAGGATGAGGTCATCAGGCTGAAGCAAGAAATTGAAGTTCTAAAGGGTCTCAGGTAA

mRNA sequence

TAAAAAGGAAAGAAAATGGAGGAGGAAGAGAAGTATAAGAAGGGGTTTAGAATGGGATAGAGTGGTTTAATTAAGGAATTAAGTTGGTGAGTTTTAGAAGAAGAATTATTATTATTATTATTATTATTGCAGCGACCTGAAGCTAGTTCAAACTAGTGGAAGGTTGTGTGCTGGGGTTGGAAAGGTTTATTAATTATGGCTCGTGGGAAGGTTCAAATGAAGAGGATTGAGAATCCAGTGCATAGACAAGTTACTTTCTGTAAGCGTCGAGCTGGTCTCCTTAAGAAGGCTAAGGAGCTCTCTGTCCTTTGCGATGCTCAAATTGGAGTTTTCATTTTCTCTGCTCATGGAAAGCTCTATGAACTTGCCACTAAAGGAACCATGCAAGGGCTTATTGAAAGGTACATGAAGCACACCAATGGGAATCAGCCACCAGACCCACCTATTGATCACCAAACTCTGGAAGTAAAGGATGAGGTCATCAGGCTGAAGCAAGAAATTGAAGTTCTAAAGGGTCTCAGGTAA

Coding sequence (CDS)

ATGGCTCGTGGGAAGGTTCAAATGAAGAGGATTGAGAATCCAGTGCATAGACAAGTTACTTTCTGTAAGCGTCGAGCTGGTCTCCTTAAGAAGGCTAAGGAGCTCTCTGTCCTTTGCGATGCTCAAATTGGAGTTTTCATTTTCTCTGCTCATGGAAAGCTCTATGAACTTGCCACTAAAGGAACCATGCAAGGGCTTATTGAAAGGTACATGAAGCACACCAATGGGAATCAGCCACCAGACCCACCTATTGATCACCAAACTCTGGAAGTAAAGGATGAGGTCATCAGGCTGAAGCAAGAAATTGAAGTTCTAAAGGGTCTCAGGTAA

Protein sequence

MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATKGTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR

Homology

[Close]

BLAST of CcUC08G145800 vs. NCBI nr
Match: XP_038891170.1 (agamous-like MADS-box protein AGL12 [Benincasa hispida])

HSP 1 Score: 217.6 bits (553), Expect = 5.2e-53
Identity = 106/109 (97.25%), Postives = 109/109 (100.00%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVK+E+IRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. NCBI nr
Match: XP_011656111.1 (agamous-like MADS-box protein AGL12 [Cucumis sativus] >KGN52697.1 hypothetical protein Csa_008811 [Cucumis sativus])

HSP 1 Score: 213.8 bits (543), Expect = 7.5e-52
Identity = 104/109 (95.41%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPI HQTLEVK+E+IRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTLEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. NCBI nr
Match: KAA0039245.1 (agamous-like MADS-box protein AGL12 [Cucumis melo var. makuwa])

HSP 1 Score: 211.5 bits (537), Expect = 3.7e-51
Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPI HQT EVK+E+IRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. NCBI nr
Match: XP_016902413.1 (PREDICTED: agamous-like MADS-box protein AGL12 [Cucumis melo])

HSP 1 Score: 209.9 bits (533), Expect = 1.1e-50
Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPI HQT E K+E+IRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. NCBI nr
Match: XP_022925494.1 (agamous-like MADS-box protein AGL12 [Cucurbita moschata] >XP_023536341.1 agamous-like MADS-box protein AGL12 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 206.1 bits (523), Expect = 1.6e-49
Identity = 101/109 (92.66%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYM HTNG+QPP+PPID+QTLEVK+EV RLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. ExPASy Swiss-Prot
Match: Q38841 (Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=1 SV=2)

HSP 1 Score: 141.7 bits (356), Expect = 4.8e-33
Identity = 73/113 (64.60%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGK+Q+KRIENPVHRQVTFCKRR GLLKKAKELSVLCDA+IGV IFS  GKL+ELATK
Sbjct: 1   MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATK 60

Query: 61  GTMQGLIERYMKHTNGNQ-------PPDPPIDHQTLEVKDEVIRLKQEIEVLK 107
           GTM+G+I++YMK T G +            +    L+ KDE+  LKQEIE+L+
Sbjct: 61  GTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQ 113

[Close]

BLAST of CcUC08G145800 vs. ExPASy Swiss-Prot
Match: A2YQK9 (MADS-box transcription factor 26 OS=Oryza sativa subsp. indica OX=39946 GN=MADS26 PE=2 SV=2)

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-31
Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQ++RIENPVHRQVTFCKRRAGLLKKA+ELS+LC+A IG+ IFSAHGKLY+LAT 
Sbjct: 1   MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVL-KGLR 110
           GTM+ LIERY K  +G Q        Q ++ K E + LKQEI +L KGLR
Sbjct: 61  GTMEELIERY-KSASGEQA--NACGDQRMDPKQEAMVLKQEINLLQKGLR 107

[Close]

BLAST of CcUC08G145800 vs. ExPASy Swiss-Prot
Match: Q0J8G8 (MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS26 PE=2 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 1.2e-31
Identity = 74/110 (67.27%), Postives = 87/110 (79.09%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQ++RIENPVHRQVTFCKRRAGLLKKA+ELS+LC+A IG+ IFSAHGKLY+LAT 
Sbjct: 1   MARGKVQLRRIENPVHRQVTFCKRRAGLLKKARELSILCEADIGIIIFSAHGKLYDLATT 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVL-KGLR 110
           GTM+ LIERY K  +G Q        Q ++ K E + LKQEI +L KGLR
Sbjct: 61  GTMEELIERY-KSASGEQA--NACGDQRMDPKQEAMVLKQEINLLQKGLR 107

[Close]

BLAST of CcUC08G145800 vs. ExPASy Swiss-Prot
Match: Q2QW55 (MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica OX=39947 GN=MADS33 PE=2 SV=2)

HSP 1 Score: 127.5 bits (319), Expect = 9.3e-29
Identity = 65/110 (59.09%), Postives = 81/110 (73.64%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           M RGKVQM+RIENPVHRQVTFCKRR GLLKKA+ELSVLCDA +GV IFS+ GKL+ELAT 
Sbjct: 1   MVRGKVQMRRIENPVHRQVTFCKRRGGLLKKARELSVLCDADVGVIIFSSQGKLHELATN 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVL-KGLR 110
           G M  L+ERY  +  G Q     +  Q +  +  +  L++EI++L +GLR
Sbjct: 61  GNMHNLVERYQSNVAGGQMEPGALQRQQV-AEQGIFLLREEIDLLQRGLR 109

[Close]

BLAST of CcUC08G145800 vs. ExPASy Swiss-Prot
Match: O64645 (MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1)

HSP 1 Score: 102.1 bits (253), Expect = 4.2e-21
Identity = 55/106 (51.89%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           M RGK QMKRIEN   RQVTF KRR GLLKKA ELSVLCDA++ + IFS  GKLYE A+ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFAS- 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLK 107
             MQ  I+RY++HT       P  +     +K E   + ++IE L+
Sbjct: 61  SNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLE 105

[Close]

BLAST of CcUC08G145800 vs. ExPASy TrEMBL
Match: A0A0A0KW77 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650620 PE=4 SV=1)

HSP 1 Score: 213.8 bits (543), Expect = 3.7e-52
Identity = 104/109 (95.41%), Postives = 108/109 (99.08%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPI HQTLEVK+E+IRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTLEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. ExPASy TrEMBL
Match: A0A5A7TCW0 (Agamous-like MADS-box protein AGL12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G00340 PE=4 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.8e-51
Identity = 103/109 (94.50%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPI HQT EVK+E+IRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEVKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. ExPASy TrEMBL
Match: A0A1S4E2G4 (agamous-like MADS-box protein AGL12 OS=Cucumis melo OX=3656 GN=LOC103498765 PE=4 SV=1)

HSP 1 Score: 209.9 bits (533), Expect = 5.3e-51
Identity = 102/109 (93.58%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IG+FIFSAHGKLYELATK
Sbjct: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGLFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYMKHTNGNQPPDPPI HQT E K+E+IRLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMKHTNGNQPPDPPIHHQTSEAKEEIIRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. ExPASy TrEMBL
Match: A0A6J1ECC1 (agamous-like MADS-box protein AGL12 OS=Cucurbita moschata OX=3662 GN=LOC111432780 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 7.6e-50
Identity = 101/109 (92.66%), Postives = 107/109 (98.17%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYM HTNG+QPP+PPID+QTLEVK+EV RLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPPIDNQTLEVKEEVNRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. ExPASy TrEMBL
Match: A0A6J1IA69 (agamous-like MADS-box protein AGL12 OS=Cucurbita maxima OX=3661 GN=LOC111472603 PE=4 SV=1)

HSP 1 Score: 202.6 bits (514), Expect = 8.4e-49
Identity = 100/109 (91.74%), Postives = 106/109 (97.25%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGKVQ+KRIENPVHRQVTFCKRRAGLLKKAKELSVLCDA+IGVFIFSAHGKLYELATK
Sbjct: 1   MARGKVQLKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAEIGVFIFSAHGKLYELATK 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLKGLR 110
           GTMQGLIERYM HTNG+QPP+P ID+QTLEVK+EV RLKQEIEVLKGLR
Sbjct: 61  GTMQGLIERYMNHTNGSQPPEPRIDNQTLEVKEEVNRLKQEIEVLKGLR 109

[Close]

BLAST of CcUC08G145800 vs. TAIR 10
Match: AT1G71692.1 (AGAMOUS-like 12 )

HSP 1 Score: 141.7 bits (356), Expect = 3.4e-34
Identity = 73/113 (64.60%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           MARGK+Q+KRIENPVHRQVTFCKRR GLLKKAKELSVLCDA+IGV IFS  GKL+ELATK
Sbjct: 1   MARGKIQLKRIENPVHRQVTFCKRRTGLLKKAKELSVLCDAEIGVVIFSPQGKLFELATK 60

Query: 61  GTMQGLIERYMKHTNGNQ-------PPDPPIDHQTLEVKDEVIRLKQEIEVLK 107
           GTM+G+I++YMK T G +            +    L+ KDE+  LKQEIE+L+
Sbjct: 61  GTMEGMIDKYMKCTGGGRGSSSATFTAQEQLQPPNLDPKDEINVLKQEIEMLQ 113

[Close]

BLAST of CcUC08G145800 vs. TAIR 10
Match: AT2G45660.1 (AGAMOUS-like 20 )

HSP 1 Score: 102.1 bits (253), Expect = 3.0e-22
Identity = 55/106 (51.89%), Postives = 68/106 (64.15%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           M RGK QMKRIEN   RQVTF KRR GLLKKA ELSVLCDA++ + IFS  GKLYE A+ 
Sbjct: 1   MVRGKTQMKRIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVSLIIFSPKGKLYEFAS- 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLK 107
             MQ  I+RY++HT       P  +     +K E   + ++IE L+
Sbjct: 61  SNMQDTIDRYLRHTKDRVSTKPVSEENMQHLKYEAANMMKKIEQLE 105

[Close]

BLAST of CcUC08G145800 vs. TAIR 10
Match: AT1G24260.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 100.5 bits (249), Expect = 8.7e-22
Identity = 52/108 (48.15%), Postives = 71/108 (65.74%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           M RG+V++KRIEN ++RQVTF KRR GLLKKA ELSVLCDA++ + IFS  GKLYE  + 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEV--KDEVIRLKQEIEVLK 107
            +M   +ERY K   G   P+ P      E+  + E ++LK+  + L+
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAELSSQQEYLKLKERYDALQ 108

[Close]

BLAST of CcUC08G145800 vs. TAIR 10
Match: AT1G69120.1 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 100.1 bits (248), Expect = 1.1e-21
Identity = 51/106 (48.11%), Postives = 72/106 (67.92%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           M RG+VQ+KRIEN ++RQVTF KRRAGLLKKA E+SVLCDA++ + +FS  GKL+E +T 
Sbjct: 1   MGRGRVQLKRIENKINRQVTFSKRRAGLLKKAHEISVLCDAEVALVVFSHKGKLFEYSTD 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQTLEVKDEVIRLKQEIEVLK 107
             M+ ++ERY +++   +    P          E  RLK +IE+L+
Sbjct: 61  SCMEKILERYERYSYAERQLIAPESDVNTNWSMEYNRLKAKIELLE 106

[Close]

BLAST of CcUC08G145800 vs. TAIR 10
Match: AT1G24260.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 99.0 bits (245), Expect = 2.5e-21
Identity = 52/109 (47.71%), Postives = 70/109 (64.22%), Query Frame = 0


Query: 1   MARGKVQMKRIENPVHRQVTFCKRRAGLLKKAKELSVLCDAQIGVFIFSAHGKLYELATK 60
           M RG+V++KRIEN ++RQVTF KRR GLLKKA ELSVLCDA++ + IFS  GKLYE  + 
Sbjct: 1   MGRGRVELKRIENKINRQVTFAKRRNGLLKKAYELSVLCDAEVALIIFSNRGKLYEFCSS 60

Query: 61  GTMQGLIERYMKHTNGNQPPDPPIDHQ---TLEVKDEVIRLKQEIEVLK 107
            +M   +ERY K   G   P+ P        L  + E ++LK+  + L+
Sbjct: 61  SSMLRTLERYQKCNYGAPEPNVPSREALAVELSSQQEYLKLKERYDALQ 109

The following BLAST results are available for this feature:

BLAST of CcUC08G145800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038891170.1	5.2e-53	97.25	agamous-like MADS-box protein AGL12 [Benincasa hispida]	[more]
XP_011656111.1	7.5e-52	95.41	agamous-like MADS-box protein AGL12 [Cucumis sativus] >KGN52697.1 hypothetical p...	[more]
KAA0039245.1	3.7e-51	94.50	agamous-like MADS-box protein AGL12 [Cucumis melo var. makuwa]	[more]
XP_016902413.1	1.1e-50	93.58	PREDICTED: agamous-like MADS-box protein AGL12 [Cucumis melo]	[more]
XP_022925494.1	1.6e-49	92.66	agamous-like MADS-box protein AGL12 [Cucurbita moschata] >XP_023536341.1 agamous...	[more]

BLAST of CcUC08G145800 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q38841	4.8e-33	64.60	Agamous-like MADS-box protein AGL12 OS=Arabidopsis thaliana OX=3702 GN=AGL12 PE=...	[more]
A2YQK9	1.2e-31	67.27	MADS-box transcription factor 26 OS=Oryza sativa subsp. indica OX=39946 GN=MADS2...	[more]
Q0J8G8	1.2e-31	67.27	MADS-box transcription factor 26 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
Q2QW55	9.3e-29	59.09	MADS-box transcription factor 33 OS=Oryza sativa subsp. japonica OX=39947 GN=MAD...	[more]
O64645	4.2e-21	51.89	MADS-box protein SOC1 OS=Arabidopsis thaliana OX=3702 GN=SOC1 PE=1 SV=1	[more]

BLAST of CcUC08G145800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KW77	3.7e-52	95.41	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G650620 PE=4 SV=1	[more]
A0A5A7TCW0	1.8e-51	94.50	Agamous-like MADS-box protein AGL12 OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]
A0A1S4E2G4	5.3e-51	93.58	agamous-like MADS-box protein AGL12 OS=Cucumis melo OX=3656 GN=LOC103498765 PE=4...	[more]
A0A6J1ECC1	7.6e-50	92.66	agamous-like MADS-box protein AGL12 OS=Cucurbita moschata OX=3662 GN=LOC11143278...	[more]
A0A6J1IA69	8.4e-49	91.74	agamous-like MADS-box protein AGL12 OS=Cucurbita maxima OX=3661 GN=LOC111472603 ...	[more]

BLAST of CcUC08G145800 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71692.1	3.4e-34	64.60	AGAMOUS-like 12	[more]
AT2G45660.1	3.0e-22	51.89	AGAMOUS-like 20	[more]
AT1G24260.1	8.7e-22	48.15	K-box region and MADS-box transcription factor family protein	[more]
AT1G69120.1	1.1e-21	48.11	K-box region and MADS-box transcription factor family protein	[more]
AT1G24260.2	2.5e-21	47.71	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002100	Transcription factor, MADS-box	PRINTS	PR00404	MADSDOMAIN	coord: 3..23 score: 63.09 coord: 23..38 score: 80.42 coord: 38..59 score: 47.64
IPR002100	Transcription factor, MADS-box	SMART	SM00432	madsneu2	coord: 1..60 e-value: 2.7E-35 score: 133.3
IPR002100	Transcription factor, MADS-box	PFAM	PF00319	SRF-TF	coord: 10..56 e-value: 9.0E-23 score: 79.6
IPR002100	Transcription factor, MADS-box	PROSITE	PS50066	MADS_BOX_2	coord: 1..61 score: 29.337921
IPR036879	Transcription factor, MADS-box superfamily	GENE3D	3.40.1810.10		coord: 15..78 e-value: 1.4E-25 score: 90.8
IPR036879	Transcription factor, MADS-box superfamily	SUPERFAMILY	55455	SRF-like	coord: 1..76
None	No IPR available	PANTHER	PTHR48019:SF45	AGAMOUS-LIKE MADS-BOX PROTEIN AGL12	coord: 1..108
None	No IPR available	PANTHER	PTHR48019	SERUM RESPONSE FACTOR HOMOLOG	coord: 1..108
IPR033896	MADS MEF2-like	CDD	cd00265	MADS_MEF2_like	coord: 2..76 e-value: 1.66363E-41 score: 129.594

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC08G145800.1	CcUC08G145800.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding