CcUC08G145600 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC08G145600
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionSodium channel protein type 4 subunit alpha
LocationCicolChr08: 1012017 .. 1014986 (-)
RNA-Seq ExpressionCcUC08G145600
SyntenyCcUC08G145600
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
AATCGCCACCACCTGAAACGGCGTAACGTAGATGAAAACCGCCCACATCAACGCGAAGATTATGAACAGTGCTGTGGCCCTCGGATCTCTCCACCCCAGAATCGCCTGTGCTCTTTCCCCTTGCGTCGCCAAATCTCCCACCACAGTCTGCACTTTTCCGGCCACACTCCTCAGCCGGTCGTATCTCATCCTCACCGTGTCAATGTGCTTCGTCGTCGGAAAGTTGTCGAACTCTTCATCCAGCTCGTCCGGGTGAGTGTGCTCCGCCTGCGACAATCTCGCATCCATGTGCGGCGGATACCTCGGCCGGAACCGGTAATTCCAAATTCCAATCACGAATAGGTAGAGGAAGACGGTCGGGAGGATTAATTCGGGGTAACAAACAAGAATCAAGAACAGGACATGGACGAGGCAGGTCGTGATAGGGTTTTTCCAGATGCACACATCGTTGAACCATCGGTAAATCCCGGTGATTCCTGAGAGAAGCGACATTATGCGATTGAAATTCGCTTTGCTTCTTCTGAGGCTAAACATGTGGTAATCGACATCCAGCATGTACTCCACCGCTTCTCGCCGGAGTGGGGGCTCGGCCCGGGCCAGCCTCGCCGCCACTATGTTCATCGCGTGGAAGCGGAGTAGATCGATGTGGCGGACTGGGATTGGTTGCAGGTAGTGCATTTTGGGGAGCAATGGCTTGCCGTACTGTGTGAGCATGTTGGCCCAGGCGGTGCAGGTGAATCTCAAAGCCAATTGAAGCTCTCCGTGCTTTTTCAGGCCAGAGGGCTGAAGAACCAATAGAGGATAATAATGCGTATATACTTTGTCTGTCTCTAATGTGGATAATCGAATCCTTACTTTTCCAATTCTCTGGTCTTTTGCGTCTTCTTTGCTTCCGTTTGTGTGAGCGTTGTCGAAAACCCCAATTGTGATTACAGTGCAAGGATCGTAAACTTCCCATGTGTACTGTTCGTTCCAGCGAGGGGCGAGGGTGTCTAAAAGAGTTCTGGTTCGAACCCATTTGTTGCCGTATTTGGCCACACAGTAAGCATCCGTGGTTCTTCCTTCTTTGCTCTTCATTGGAAGCAGATTCCGAGCGCTCAAAATCCCTAATTCCAGTACTCCGATGCTGTCTTTTCTGAGGATTTTGGAGGATGGTTGAAGATCGCTGCTGAAGTGGGTTGATTCGTCTAGGACATGGTACCCCGAGTCGATCCAGAGACGCACATGGATCTTGCTGGAGAATTTCTCCTTCTTTTTCTCTGTTTCCTCTAATTGAGCGATGAATGGGCGGTGGAGATTGTACCAGCGGGCGTCTGGGAGTTTTGTGGACTCGATTCTCTGTGGAACTTCTCTTGATGGTACGATCACTCTTCCCAGAATCTCCCCTGTTCCTCTATCTTCAACAGAGATGATGATGAAATCTTCAAATGGTTCGGATGCTACAAACATTAGCTCCTCGTTCCAAACTGGGTTGATCACTCGCATCTGAGAAGGTTTGGTTACTTTACCCTGATTGGAGAATTGTATTCTTACGAATGTATCTGGGGGTTTGGATTTGTCTGATGGAATGAGGTCTTGAGCTTCGATCACTTGGGCTCTTAGATAGTAGAGTTTAGGAGAGAAATAGACCTTTGATCTTGTGTTGGCAAGGTTGCCATGGCTGATACTGTGAGCATCAGAATGCCAAGCATCAGGGAAGGACTCATCAGCCTGAGTTCCCATCCAAACAGCAAGCATCACTTCCCCTTTTGCTTTGATCCCCTTCTTGTCTACTAGTTTGTACCATTGAGGAGCCAATGGACTATCAGGAGGAACTCTCAACGGAACTTCAGGGATATCAAAGAAAACTCTCCCCACAAAATCATCCTTCCCCAAATCCTTGTCCTTCACAGTCACTTCCAGTAAGCTTGATTGCAATCTCTCTTTTGAGAAGGCAAAGATCTGCTTCCAAACTGGGTTTTGGTTCTTCTCCAAGTGCTTTGTAACCCCTTTGTAGTTCCCCACTTTCACTTCCACATAAGGGTCTAAACTCCCTGAAACATCCATGACAGGGAGATCTTTAGCTTTAACTACATTTACATACAGAAAATGCATCTGCTCCACCATGTCGTAGGTGCTGATGATCTTATCTTTTCCTCTGTAGCCGTACCGCAATCTTGCTGCCAATGGAGGGCTAGTCTCCACCAATGCGAACTCTGGATTTTGCTTTGGAACTGGCAAATGCATTACTGTCGCCGGAGATGGACCTGCTTGAGCGAAGTCCATCCGGGTTGCCATTGGCGGTGGCCGCTTGAATTCTGTCGGTGGTGGAGCCACTGACGCCGCAGCCGCAGCCGGAGCTGTTCCTATGGAGTGGAAGGTCTTGACGTCCTTTTCCTTCTTCTTTACCTTCACACTCTCGTAACCATTACTGGGGACATGTAGTTCCTCCCGATCGAAAATGTTGGGATTAATTTCTTGCAGGGGGGTTTCGAAATGGGGAGGTTGTGGCGGCGCCGGATGAGTAGGAGGTGGAGAAGAAAAAGAAGAGGAATCATCATCATCGTGAATTATATACATTCGAAACCCAATATCGCCTTTGATATGAGAGAAAAGGCCACGTTTGTCAAGTGGGTATCTCTGGATATTAGCTTCCTGTTCAGAAAGAGGCACCGACATGCCGGAGATTCTGACACGGCCGAGAAAATCCCGGCGGTGGCCGGATTTCCTCTCGTTAAAAACAACGACATCGATGGTCTTATTGGGAAAATCTTTAGGGTGGGAGATGTTGAAGAGGAGCTTCTCGTTCCAATAAGGATTGAGGTCTCTGTGTTTGGTATGAGTCCTCTGTTTTTGGTCGTCAAAATCGACCTCCACAAAGGGGTTGGCAGAGTCGCCGTCTTTGGGCATGAGGTCGCCGGCGTCGAGGATTTCGACGACGAGCTTGGTCATGGCGGAAGAAAGGGGAGGGATTGGGGTCTGAATCTGTGA

mRNA sequence

AATCGCCACCACCTGAAACGGCGTAACGTAGATGAAAACCGCCCACATCAACGCGAAGATTATGAACAGTGCTGTGGCCCTCGGATCTCTCCACCCCAGAATCGCCTGTGCTCTTTCCCCTTGCGTCGCCAAATCTCCCACCACAGTCTGCACTTTTCCGGCCACACTCCTCAGCCGGTCGTATCTCATCCTCACCGTGTCAATGTGCTTCGTCGTCGGAAAGTTGTCGAACTCTTCATCCAGCTCGTCCGGGTGAGTGTGCTCCGCCTGCGACAATCTCGCATCCATGTGCGGCGGATACCTCGGCCGGAACCGAATCAAGAACAGGACATGGACGAGGCAGGTCGTGATAGGGTTTTTCCAGATGCACACATCGTTGAACCATCGCGACATTATGCGATTGAAATTCGCTTTGCTTCTTCTGAGGCTAAACATGTGGTAATCGACATCCAGCATGTACTCCACCGCTTCTCGCCGGAGTGGGGGCTCGGCCCGGGCCAGCCTCGCCGCCACTATGTTCATCGCGTGGAAGCGGAATTCCGAGCGCTCAAAATCCCTAATTCCAGTACTCCGATGCTGTCTTTTCTGAGGATTTTGGAGGATGCGATGAATGGGCGGTGGAGATTGTACCAGCGGGCGTCTGGGAGTTTTGTGGACTCGATTCTCTGTGGAACTTCTCTTGATGGTACGATCACTCTTCCCAGAATCTCCCCTCCGTACCGCAATCTTGCTGCCAATGGAGGGCTAGTCTCCACCAATGCGAACTCTGGATTTTGCTTTGGAACTGGCAAATGCATTACTTCCATCCGGGTTGCCATTGGCGGTGGCCGCTTGAATTCTGTCGGTGGTGGAGCCACTGACGCCGCAGCCGCAGCCGGAGCTGTTCCTATGGAGTGGAAGGGGGGTTTCGAAATGGGGAGGTTGTGGCGGCGCCGGATGAGTAGGAGGTGGAGAAGAAAAAGAAGAGGAATCATCATCATCGTGAATTATATACATTCGAAACCCAATATCGCCTTTGATATGAGAGAAAAGGCCACGTTTGTCAAGTGGGTATCTCTGGATATTAGCTTCCTGTTCAGAAAGAGGCACCGACATGCCGGAGATTCTGACACGGCCGAGAAAATCCCGGCGGTGGCCGGATTTCCTCTCGTTAAAAACAACGACATCGATGGTCTTATTGGGAAAATCTTTAGGGTGGGAGATGTTGAAGAGGAGCTTCTCGTTCCAATAAGGATTGAGGTCTCTGTGTTTGGTATGAGTCCTCTGTTTTTGGTCGTCAAAATCGACCTCCACAAAGGGGTTGGCAGAGTCGCCGTCTTTGGGCATGAGGTCGCCGGCGTCGAGGATTTCGACGACGAGCTTGGTCATGGCGGAAGAAAGGGGAGGGATTGGGGTCTGAATCTGTGA

Coding sequence (CDS)

AATCGCCACCACCTGAAACGGCGTAACGTAGATGAAAACCGCCCACATCAACGCGAAGATTATGAACAGTGCTGTGGCCCTCGGATCTCTCCACCCCAGAATCGCCTGTGCTCTTTCCCCTTGCGTCGCCAAATCTCCCACCACAGTCTGCACTTTTCCGGCCACACTCCTCAGCCGGTCGTATCTCATCCTCACCGTGTCAATGTGCTTCGTCGTCGGAAAGTTGTCGAACTCTTCATCCAGCTCGTCCGGGTGAGTGTGCTCCGCCTGCGACAATCTCGCATCCATGTGCGGCGGATACCTCGGCCGGAACCGAATCAAGAACAGGACATGGACGAGGCAGGTCGTGATAGGGTTTTTCCAGATGCACACATCGTTGAACCATCGCGACATTATGCGATTGAAATTCGCTTTGCTTCTTCTGAGGCTAAACATGTGGTAATCGACATCCAGCATGTACTCCACCGCTTCTCGCCGGAGTGGGGGCTCGGCCCGGGCCAGCCTCGCCGCCACTATGTTCATCGCGTGGAAGCGGAATTCCGAGCGCTCAAAATCCCTAATTCCAGTACTCCGATGCTGTCTTTTCTGAGGATTTTGGAGGATGCGATGAATGGGCGGTGGAGATTGTACCAGCGGGCGTCTGGGAGTTTTGTGGACTCGATTCTCTGTGGAACTTCTCTTGATGGTACGATCACTCTTCCCAGAATCTCCCCTCCGTACCGCAATCTTGCTGCCAATGGAGGGCTAGTCTCCACCAATGCGAACTCTGGATTTTGCTTTGGAACTGGCAAATGCATTACTTCCATCCGGGTTGCCATTGGCGGTGGCCGCTTGAATTCTGTCGGTGGTGGAGCCACTGACGCCGCAGCCGCAGCCGGAGCTGTTCCTATGGAGTGGAAGGGGGGTTTCGAAATGGGGAGGTTGTGGCGGCGCCGGATGAGTAGGAGGTGGAGAAGAAAAAGAAGAGGAATCATCATCATCGTGAATTATATACATTCGAAACCCAATATCGCCTTTGATATGAGAGAAAAGGCCACGTTTGTCAAGTGGGTATCTCTGGATATTAGCTTCCTGTTCAGAAAGAGGCACCGACATGCCGGAGATTCTGACACGGCCGAGAAAATCCCGGCGGTGGCCGGATTTCCTCTCGTTAAAAACAACGACATCGATGGTCTTATTGGGAAAATCTTTAGGGTGGGAGATGTTGAAGAGGAGCTTCTCGTTCCAATAAGGATTGAGGTCTCTGTGTTTGGTATGAGTCCTCTGTTTTTGGTCGTCAAAATCGACCTCCACAAAGGGGTTGGCAGAGTCGCCGTCTTTGGGCATGAGGTCGCCGGCGTCGAGGATTTCGACGACGAGCTTGGTCATGGCGGAAGAAAGGGGAGGGATTGGGGTCTGAATCTGTGA

Protein sequence

NRHHLKRRNVDENRPHQREDYEQCCGPRISPPQNRLCSFPLRRQISHHSLHFSGHTPQPVVSHPHRVNVLRRRKVVELFIQLVRVSVLRLRQSRIHVRRIPRPEPNQEQDMDEAGRDRVFPDAHIVEPSRHYAIEIRFASSEAKHVVIDIQHVLHRFSPEWGLGPGQPRRHYVHRVEAEFRALKIPNSSTPMLSFLRILEDAMNGRWRLYQRASGSFVDSILCGTSLDGTITLPRISPPYRNLAANGGLVSTNANSGFCFGTGKCITSIRVAIGGGRLNSVGGGATDAAAAAGAVPMEWKGGFEMGRLWRRRMSRRWRRKRRGIIIIVNYIHSKPNIAFDMREKATFVKWVSLDISFLFRKRHRHAGDSDTAEKIPAVAGFPLVKNNDIDGLIGKIFRVGDVEEELLVPIRIEVSVFGMSPLFLVVKIDLHKGVGRVAVFGHEVAGVEDFDDELGHGGRKGRDWGLNL
Homology
BLAST of CcUC08G145600 vs. NCBI nr
Match: KAG7025207.1 (hypothetical protein SDJN02_14030, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 328.9 bits (842), Expect = 6.9e-86
Identity = 180/283 (63.60%), Postives = 201/283 (71.02%), Query Frame = 0

Query: 203 MNGRWRLYQRASGSFVDSILCGTSLDGTITLPRI-----SPPYRNLAANGGLVSTNANSG 262
           MNGRWRLYQRASGSFVDSILCGTS DGTITLPRI     S     + ++ G  +TN +S 
Sbjct: 1   MNGRWRLYQRASGSFVDSILCGTSRDGTITLPRISAVPLSSTVMMMKSSNGSGATNISSS 60

Query: 263 FCFGTGKCI------------------TSIRVAIGGGRLNSVGGGATDAAAAAGAVPMEW 322
           F  G    +                   SIRVAIG G LNSVGGGATDAA AAGA PMEW
Sbjct: 61  FQTGRTAILLLMGGWSPPMRTLDFALELSIRVAIGCGHLNSVGGGATDAAVAAGAAPMEW 120

Query: 323 KGGFEMGRLWRRRMSRRWRRKRRGIIIIVNYIHSKPNIAFDMREKATFVKWVSLDISFLF 382
           KG FEMG LWRRR            IIIV+ IHSKPNIAFDMREK TF+KWVSLD+S LF
Sbjct: 121 KGSFEMGSLWRRRR-----------IIIVSQIHSKPNIAFDMREKTTFIKWVSLDVSVLF 180

Query: 383 RKRHRHAGDSDTAEKIPAVAGFPLVKNNDIDGLIGKIFRVGDVEEELLVPIRIEVSVFGM 442
           R  HRHAGDSDTAEKI AVAGFP+V N+DIDG +G++ RVGDVE E+L+P RIE+ V+G 
Sbjct: 181 RTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGVYGT 240

Query: 443 SPLFLVVKIDLHKGVGRVAVFGHEVAGVEDFDDELGHGGRKGR 463
           SPLFLV K+DL KGVGRVAV GH+VAGVED  +ELGH   K R
Sbjct: 241 SPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLKQR 272

BLAST of CcUC08G145600 vs. NCBI nr
Match: KAG6592392.1 (hypothetical protein SDJN03_14738, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 227.3 bits (578), Expect = 2.8e-55
Identity = 113/164 (68.90%), Postives = 129/164 (78.66%), Query Frame = 0

Query: 297 MEWKGGFEMGRLWRRRMSRRWRRKRRGIIIIVNYIHSKPNIAFDMREKATFVKWVSLDIS 356
           MEWKG FE+G LWRRR            IIIV+ IHSKPNIAFDMREK TF+KWVSLD+S
Sbjct: 1   MEWKGSFEIGSLWRRRR-----------IIIVSQIHSKPNIAFDMREKTTFIKWVSLDVS 60

Query: 357 FLFRKRHRHAGDSDTAEKIPAVAGFPLVKNNDIDGLIGKIFRVGDVEEELLVPIRIEVSV 416
            LFR  HRHAGDSDTAEKI AVAGFP+V N+DIDG +G++ RVGDVE E+L+P RIE+ V
Sbjct: 61  VLFRTGHRHAGDSDTAEKIAAVAGFPVVINHDIDGGVGELSRVGDVENEILIPARIEIGV 120

Query: 417 FGMSPLFLVVKIDLHKGVGRVAVFGHEVAGVEDFDDELGHGGRK 461
           +G SPLFLV K+DL KGVGRVAV GH+VAGVED  +ELGH   K
Sbjct: 121 YGTSPLFLVAKVDLDKGVGRVAVLGHKVAGVEDLYNELGHRNLK 153

BLAST of CcUC08G145600 vs. NCBI nr
Match: KAB8097662.1 (hypothetical protein EE612_026448, partial [Oryza sativa] >BAS91789.1 Os04g0691750, partial [Oryza sativa Japonica Group])

HSP 1 Score: 148.7 bits (374), Expect = 1.3e-31
Identity = 87/214 (40.65%), Postives = 123/214 (57.48%), Query Frame = 0

Query: 1   NRHHLKRRNVDENRPHQREDYEQCCGPRISPPQNRLCSFPLRRQISHHSLHFSGHTPQPV 60
           +RHHL+RR+V+ +R  +RE  E   G  ++P + RL + PLR Q++HH LH  GH PQPV
Sbjct: 20  HRHHLERRDVEHHRDDEREQDEDGGGTGVAPAEQRLGALPLRGQVTHHRLHPPGHAPQPV 79

Query: 61  VSHPHRVNVLRRRKVVELFIQLVRVSVLRL--RQSRIHVRRIPRPEP------------- 120
           V HPH V  L   + VEL +QLVRV +LRL  RQ R+HVRR+PRP P             
Sbjct: 80  VPHPHHVPGLAGGERVELLVQLVRVHLLRLRVRQRRVHVRRLPRPPPVVPHPDDEQVEED 139

Query: 121 -----------NQEQDMDEAGRDRVFPDAHIVEPSRH---------YAIEIRFASSEAKH 180
                      ++EQ + + G  RV P A  + P RH         + +E+  A ++A+H
Sbjct: 140 GGEDQLRVAHQDEEQHVHQDGGHRVLPLADPIHPPRHRHRPGEERRHPLEVGLAPTQAEH 199

BLAST of CcUC08G145600 vs. NCBI nr
Match: RCV14735.1 (hypothetical protein SETIT_3G002300v2 [Setaria italica])

HSP 1 Score: 137.5 bits (345), Expect = 2.9e-28
Identity = 85/212 (40.09%), Postives = 116/212 (54.72%), Query Frame = 0

Query: 3   HHLKRRNVDENRPHQREDYEQCCGPRISPPQNRLCSFPLRRQISHHSLHFSGHTPQPVVS 62
           HHL+ R+V  +R HQR+D E    PR++P Q RL + PLR Q++ H L  +G   Q VV+
Sbjct: 52  HHLEGRHVQHHRHHQRQDEEDGRRPRVAPAQQRLRALPLRGQVADHRLDAAGDAAQAVVA 111

Query: 63  HPHRVNVLRRRKVVELFIQLVRVSV--LRLRQSRIHVRRIPRPEP--------------- 122
           HPH V  L R + VEL +QLV V    LR+RQ R+HVRR+ RP P               
Sbjct: 112 HPHHVPRLARGEGVELLVQLVGVHQPGLRVRQHRVHVRRLARPPPVVPHADHEQVQEHRR 171

Query: 123 ---------NQEQDMDEAGRDRVFPDAHIVEPSRHY---------AIEIRFASSEAKHVV 180
                    ++EQ + +  R RV P A  V P  H          A+E+  A  +A+HV 
Sbjct: 172 EDQLRVAHQDEEQHVHQHRRQRVLPLADAVHPLAHRHRAGEERRDAVEVGLAPPQAEHVR 231

BLAST of CcUC08G145600 vs. NCBI nr
Match: KAB8103102.1 (hypothetical protein EE612_035329, partial [Oryza sativa])

HSP 1 Score: 129.8 bits (325), Expect = 6.1e-26
Identity = 82/211 (38.86%), Postives = 110/211 (52.13%), Query Frame = 0

Query: 2   RHHLKRRNVDENRPHQREDYEQCCGPRISPPQNRLCSFPLRRQISHHSLHFSGHTPQPVV 61
           RHH +RR+V+ +   + ED E+   PR+ PPQ RL   PLRR ++ H L+  G  PQPVV
Sbjct: 38  RHHPERRHVEHDGGDEAEDDEEARRPRVPPPQQRLQPLPLRRHVADHRLYPPGDAPQPVV 97

Query: 62  SHPHRVNVLRRRKVVELFIQLVRVSVLRLRQSRIHVRRIPRPEP---------------- 121
            H H V + RRR+ VEL +QLV V  LR R  R+HVRR+ RP P                
Sbjct: 98  PHVHHVLLPRRRERVELLVQLVGVHRLRPRHLRVHVRRVARPPPVVPQPDHEHVEEHRGE 157

Query: 122 --------NQEQDMDEAGRDRVFPDAHIVEPSRHY---------AIEIRFASSEAKHVVI 180
                   ++E+D+ +  R  V P AH+ EP R           A E+  A   A HV +
Sbjct: 158 DQLRVPHEDEEEDVHQRRRRNVLPVAHVGEPPRRRGGPREERDGAEEVGLAPPHAPHVGL 217

BLAST of CcUC08G145600 vs. ExPASy TrEMBL
Match: A0A0A0KSX0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G652215 PE=4 SV=1)

HSP 1 Score: 261.5 bits (667), Expect = 6.6e-66
Identity = 135/164 (82.32%), Postives = 147/164 (89.63%), Query Frame = 0

Query: 300 KGGFEMGRLWRRRMSRRWRRKRRGIIIIVNYIHSKPNIAFDMREKATFVKWVSLDISFLF 359
           +G FEMGRLW R M RR RRK R  IIIVN+IHSK NIAFDMREKATFVKWVSL+ISFLF
Sbjct: 82  QGRFEMGRLWWRWMGRRRRRKGRR-IIIVNHIHSKSNIAFDMREKATFVKWVSLNISFLF 141

Query: 360 RKRHRHAGDSDTAEKIPAVAGFPLVKNNDIDGLIGKIFRVGDVEEELLVPIRIEVSVFGM 419
           RKRHRHAGDS+TAEKIPAVAGFPLV N++IDGL+GKIFRVGDVEEELL+P+RIE+S+FGM
Sbjct: 142 RKRHRHAGDSNTAEKIPAVAGFPLVINHNIDGLVGKIFRVGDVEEELLIPVRIEISMFGM 201

Query: 420 SPLFLVVKIDLHKGVGRVAVFGHEVAGVEDFDDELGHGGRKGRD 464
           S LFLVVKI+L KG GRVAVFGHEVAGVEDF  ELGHGG K RD
Sbjct: 202 SSLFLVVKINLDKGAGRVAVFGHEVAGVEDFYYELGHGGGKDRD 244

BLAST of CcUC08G145600 vs. ExPASy TrEMBL
Match: A0A0P0WH06 (Os04g0691750 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0691750 PE=4 SV=1)

HSP 1 Score: 148.7 bits (374), Expect = 6.2e-32
Identity = 87/214 (40.65%), Postives = 123/214 (57.48%), Query Frame = 0

Query: 1   NRHHLKRRNVDENRPHQREDYEQCCGPRISPPQNRLCSFPLRRQISHHSLHFSGHTPQPV 60
           +RHHL+RR+V+ +R  +RE  E   G  ++P + RL + PLR Q++HH LH  GH PQPV
Sbjct: 20  HRHHLERRDVEHHRDDEREQDEDGGGTGVAPAEQRLGALPLRGQVTHHRLHPPGHAPQPV 79

Query: 61  VSHPHRVNVLRRRKVVELFIQLVRVSVLRL--RQSRIHVRRIPRPEP------------- 120
           V HPH V  L   + VEL +QLVRV +LRL  RQ R+HVRR+PRP P             
Sbjct: 80  VPHPHHVPGLAGGERVELLVQLVRVHLLRLRVRQRRVHVRRLPRPPPVVPHPDDEQVEED 139

Query: 121 -----------NQEQDMDEAGRDRVFPDAHIVEPSRH---------YAIEIRFASSEAKH 180
                      ++EQ + + G  RV P A  + P RH         + +E+  A ++A+H
Sbjct: 140 GGEDQLRVAHQDEEQHVHQDGGHRVLPLADPIHPPRHRHRPGEERRHPLEVGLAPTQAEH 199

BLAST of CcUC08G145600 vs. ExPASy TrEMBL
Match: A0A368Q9S6 (Uncharacterized protein OS=Setaria italica OX=4555 GN=SETIT_3G002300v2 PE=4 SV=1)

HSP 1 Score: 137.5 bits (345), Expect = 1.4e-28
Identity = 85/212 (40.09%), Postives = 116/212 (54.72%), Query Frame = 0

Query: 3   HHLKRRNVDENRPHQREDYEQCCGPRISPPQNRLCSFPLRRQISHHSLHFSGHTPQPVVS 62
           HHL+ R+V  +R HQR+D E    PR++P Q RL + PLR Q++ H L  +G   Q VV+
Sbjct: 52  HHLEGRHVQHHRHHQRQDEEDGRRPRVAPAQQRLRALPLRGQVADHRLDAAGDAAQAVVA 111

Query: 63  HPHRVNVLRRRKVVELFIQLVRVSV--LRLRQSRIHVRRIPRPEP--------------- 122
           HPH V  L R + VEL +QLV V    LR+RQ R+HVRR+ RP P               
Sbjct: 112 HPHHVPRLARGEGVELLVQLVGVHQPGLRVRQHRVHVRRLARPPPVVPHADHEQVQEHRR 171

Query: 123 ---------NQEQDMDEAGRDRVFPDAHIVEPSRHY---------AIEIRFASSEAKHVV 180
                    ++EQ + +  R RV P A  V P  H          A+E+  A  +A+HV 
Sbjct: 172 EDQLRVAHQDEEQHVHQHRRQRVLPLADAVHPLAHRHRAGEERRDAVEVGLAPPQAEHVR 231

BLAST of CcUC08G145600 vs. ExPASy TrEMBL
Match: A0A0P0WYN8 (Os06g0614050 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os06g0614050 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 3.0e-26
Identity = 82/211 (38.86%), Postives = 110/211 (52.13%), Query Frame = 0

Query: 2   RHHLKRRNVDENRPHQREDYEQCCGPRISPPQNRLCSFPLRRQISHHSLHFSGHTPQPVV 61
           RHH +RR+V+ +   + ED E+   PR+ PPQ RL   PLRR ++ H L+  G  PQPVV
Sbjct: 38  RHHPERRHVEHDGGDEAEDDEEARRPRVPPPQQRLQPLPLRRHVADHRLYPPGDAPQPVV 97

Query: 62  SHPHRVNVLRRRKVVELFIQLVRVSVLRLRQSRIHVRRIPRPEP---------------- 121
            H H V + RRR+ VEL +QLV V  LR R  R+HVRR+ RP P                
Sbjct: 98  PHVHHVLLPRRRERVELLVQLVGVHRLRPRHLRVHVRRVARPPPVVPQPDHEHVEEHRGE 157

Query: 122 --------NQEQDMDEAGRDRVFPDAHIVEPSRHY---------AIEIRFASSEAKHVVI 180
                   ++E+D+ +  R  V P AH+ EP R           A E+  A   A HV +
Sbjct: 158 DQLRVPHEDEEEDVHQRRRRNVLPVAHVGEPPRRRGGPREERDGAEEVGLAPPHAPHVGL 217

BLAST of CcUC08G145600 vs. ExPASy TrEMBL
Match: A0A5A7P4U5 (Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Striga asiatica OX=4170 GN=STAS_03246 PE=3 SV=1)

HSP 1 Score: 115.5 bits (288), Expect = 5.8e-22
Identity = 68/183 (37.16%), Postives = 99/183 (54.10%), Query Frame = 0

Query: 27  PRISPPQNRLCSFPLRRQISHHSLHFSGHTPQPVVSHPHRVNVLRRRKVVELFIQLVRVS 86
           P ISP Q   C  PL R +S HSL+ + HTPQP+V HPH+V      + ++   + +RV 
Sbjct: 719 PWISPVQQGKCPLPLIRHVSCHSLNSTRHTPQPIVPHPHKVARFSSGERIKFLFEFIRVG 778

Query: 87  VLRLRQSRIHVRRIPRP------------------------EPNQEQDMDEAGRDRVFPD 146
           +LRLR+ R+HV RIP P                        +  QEQDM++  R+RVFP 
Sbjct: 779 ILRLRKIRVHVERIPGPKTVIPKPDCEKIKKNRGENQLGIADEYQEQDMNKDCRNRVFPL 838

Query: 147 AHIVEP---------SRHYAIEIRFASSEAKHVVIDIQHVLHRFSPEWGLGPGQPRRHYV 177
            + +EP         +RH+ ++I FA  +A+ +V+ ++HVL   SP+  L P Q  RH +
Sbjct: 839 TYPLEPRARVLNSRDNRHHTMKIGFAPPQAEQLVVHVKHVLDDLSPKRRLSPRQLSRHNI 898

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
KAG7025207.16.9e-8663.60hypothetical protein SDJN02_14030, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG6592392.12.8e-5568.90hypothetical protein SDJN03_14738, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAB8097662.11.3e-3140.65hypothetical protein EE612_026448, partial [Oryza sativa] >BAS91789.1 Os04g06917... [more]
RCV14735.12.9e-2840.09hypothetical protein SETIT_3G002300v2 [Setaria italica][more]
KAB8103102.16.1e-2638.86hypothetical protein EE612_035329, partial [Oryza sativa][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A0A0KSX06.6e-6682.32Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G652215 PE=4 SV=1[more]
A0A0P0WH066.2e-3240.65Os04g0691750 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os04... [more]
A0A368Q9S61.4e-2840.09Uncharacterized protein OS=Setaria italica OX=4555 GN=SETIT_3G002300v2 PE=4 SV=1[more]
A0A0P0WYN83.0e-2638.86Os06g0614050 protein (Fragment) OS=Oryza sativa subsp. japonica OX=39947 GN=Os06... [more]
A0A5A7P4U55.8e-2237.16Threonylcarbamoyladenosine tRNA methylthiotransferase OS=Striga asiatica OX=4170... [more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 8..23
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..27

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC08G145600.1CcUC08G145600.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0003824 catalytic activity