CcUC07G145270 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G145270
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Structural maintenance of chromosomes protein
Location	CicolChr07: 31382175 .. 31392988 (-)
RNA-Seq Expression	CcUC07G145270
Synteny	CcUC07G145270

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAACTCAAGATTTTTTTTTCCATCTTCAACAAAAATATCTACCATTTTCTTTTCTCATTTTACAAAAACAAAATGTATAGCTTTTCTTTTCTTTGTTTTTTTTCCCTAATATCCATTCTTCTCCACCACCTCTAACATTTCCACGACATATAATCTTTTTGTTCAATTCTAAACTCAAACATACATATCCACCATTTGTAAATTTCTACTTCTTGTGGATTACTCCAATCTCCTATTGTGTTGTTCATGGAGCGACTGCCTCCTATACTTATGCTACTTAGCCCCATTGTTTTCTTTAATTCTATGAAATGTCTTTTCTATAGACTTTATTTATATAACCTAATATTTATTCACTTTTTATTTTTAACAAATATATATATATATATATATATATATATTCATAGGCAGTTTTTTCAGTTAGAAACCCATTCCGTACGGATTTTATTTTAATAAAAATATAATATAGTCTTTCAGACATGTGATACTATTTATGATCATAAAAAGAATAGAATAGAATATAATCTGACAGACAGATGATAGAAGAAGAAGGAATAAAATAGAGTAGAACTTACCAAATAAGCTAAAACATGCACTAAAATGAATAATGAATGGGAAGAAATAAAATTTTATTTGTAGAGTAGTGTATGGTTGTATAGATTAAAGGAGAAAATGAAAGGGGAGAGAGGGGAGAAAGGGAGTAACCTGAAGGAAGGTGGGTTAGAGGGCCAATGGGGTAAGTAGTTGGAGAGAGGATAGCAATGGAGTCTGAGATAATCCCTCCAGTTGTGAAATTTCTCCTTCCGGACATTGAAACTTGTGGAGAGTCTGACGGTCTTGGAAGGGTCGTCGGAATAAAACTTCAACTTCTCCTCCAGCGGCAGCCCAAAGAACTGTTTCCCAACTTCTATCATTCTCTCCACCAATTCCTTGCTCACACCATGGTTGATAACCTATGTAATATAATATAATTAATTAATTAGTAACTTAATTATAAAATACGAATTATAATTAATCTACCTCCCTACCTGGAAAAAGCCGTATGACTTGCAGGCCTCCCCCACTGCCTTCACAATCCTCTCTCTCTCGTCGCATCCCAAGTCGATGATTGGAACGTTGTCCCAAGCGCACACTTCCGACAGCCGCGGCCTCTCGGATTCAGGCCGTTCATACTTCTCCGGCAACTTCTCGTGACGTCCCTCTGAACACAAAAGTTGGATCTCCATTTGTTTACCAAACCCCCCAGTACTCCTTTTTCTTCCCCTCCCACCTCCCAACATCAATCCTATTGCCTATATATAAATCATAAATACTTACCTTCACTCTTCACCTCCTCTTTTTCTTTTTTTTTTTAATATTTTATTTATATATGCGATGCAATGAGAGTGACATGCATAAACATGAGTATCATCCAACTAAATTTCTCTCCCCATCTTCTCCTCTACTCCTCTAAAATTCTTTATTCATCGTTTTAGTCTATTATTTTTTATTTTTCTATTTTACCCTTCATTTACCCATTCTTTTTTTCTATTTTCATTTTCATCGGTTAATCGATCATCAAACTAAATCATATCTATATTAAGGCCCATAGCCCAAAGTTAAAGTTTAATTTTAACAAGAAATGCAAACATAAATTTATGATTGAAATTGAAAAGTCAAAAATGCCCTTGTGTTTTGTTGGATTGCCTTGAATCTAATATAGTGTGGTGTGTTGTATAAACTCTTTAACTCTAATGATGCTTCTATTCTGTAATCTAAATAATTCTCTCTACTAATAAACTATTCTCTCTAATCGTGGACATATCTAATATATTGTTAGTGAACCATGTAAATTTTTGTATTAATTCTCTTCAACTTTACATTTTTTGTTTATATTTCATTATCAATTTTTAACAATTTGGCATCAAAGCCTCATCGTTAATGCTTGAAACTCAGCATCTATTAGACATACAAAGATGTTTGTCATAAACATGAAAATCGAGAAATTTATAGGGAGGAAAATTTTTTGTCTATGGCAGATCAAGATGTGATCCCTACTGAAGCAACAATAACTGTGGGCGTCCATTGGCTGATAAGTCGAAGAAGGTAGTCGTGAATGACAAGAATGGAAAACTCTAGAGGAGAAGGCTCATTCCATCCCATTTTGCTGTAAACGAACAATCTCATTATGATGATGTGTGGGTTCTTAATTATGGAGCGTCTTATCATGTGTGCCTGAACAGAGAGTGGTTTTCAACGTATCAAAAGAGGGAATGTTAGTATGCCTAATAGTATTATGTGCAAGATAGTTGGAATAGGCTCGGCCCTAATACGAAAAATATGATGGTGTCTTCTACACCTTGGATGAGGTTAGACATGTTCCATTAATAATGAAATGCTTGATATGTTAAAAGTGTTTAATTGCAAGGGTTGTAGTTTTAAAGGTAAAAGTCAAATCATGCATGTTTACAAGGGTTCTGAGAGGTGTGTGGGAAGTTTCATCGTATCAAGTTCCCAAGGGTGTTCATCGTAGGACACTTAATTGCAAGGGTTAGTAGTTTTAAAGGTAAAAGTCAAATCAGGCATGTTTACAAGGGTTCTGAGAGGTGTGTGGGAAGTTTCATCGCATCGAGTTCCCAAGAGTGTGTGTTCATCGTAGGACACTTAATTACATCTATTCAAATTGTCGAGGACTTTTCAAAGTTGAGTCTATTAGAGGCAACATGTACTTTATGTCTTTAATTGATATTAGTCAAGAATAACTTTGGTATGTATGATGAACCATAAGCGTGAAAGCTTCCAAAATTTCGAGTGGAAGACCTTGAGACTGGAAAGACGATCAAGCAAACTGCTAACGGTTTGGAATGATGTGGGTGTAAGTTCAATAATTTTGTAAAGCTAAAGGGAATGTCTATCATCATAGATGTTCAAAACTTAATGAGAATGCAAAATGTATAAATCAGATGTGAGTGCGGGGAGCGTGCTCTGTAATGCAGGGTTGGATAGAAGGTTTTGTGTAAAACTTGGTGTGGTCTGGTAACTCACTAGATTATTCTTTTTTTTCTTTTTTCGGGATGGGTTCAAATCCTACGCGACGACGGATTGTTGTTCCGGGTTTCAATCCTCACTTCAATGCAATTACTGGGCTGAACGCTTCTGGAAAGTCCAACATTCTAGATTCCATTTGCTTTGCTCTAGGAATTACTAATTTGCAGGAGTTTCGAGCTTCCAACCTTCAAGAGTTTGTGTGCAAGCAGGGGCAAGCAGGTATTACAGTGACGAGATAGGTTTTGTAACTTCGCAGCTGCCTTTTATGTTGAATTGATTTTCATCTACCCTTAACACATTGGTCTTTTTTTTTTTTTTTTTTTTTTTTTTNCAATTACTGGGCTGAACGCTTCTGGAAAGTCCAACATTCTAGATTCCATTTGCTTTGCTCTAGGAATTACTAATTTGCAGGAGTTTCGAGCTTCCAACCTTCAAGAGTTTGTGTGCAAGCAGGGGCAAGCAGGTATTACAGTGACGAGATAGGTTTTGTAACTTCGCAGCTGCCTTTTATGTTGAATTGATTTTCATCTACCCTTAACACATTTGTTTTTTTTTTTTTTTTTTTTTTTTTGTTACAATTTGATGGAATTTTATTATTTTCAGCAAGTTGATTTTCCGTTACTGTTGCTGCCTAAGTCTAGTTGTGGGATCTTAAACAAACTTTCCATCAGCGTCTGCAACTTCTTAATGATTTGCTGCACAGGTGCTGCGGGTCATATTTTCCCATTAGAATTTATCACTAACTACCTTAGCTGTGCGAAAAATTATTGATATTAGTAATTTGTACAGAATTCGCCTAGGACACCAATTTCTGTTCTAAAGGTCAATGATTTGACGACTTTACTTGAACAGGATCTGTTCTACAACTGTGTCCTTGAGTTCTAAAGGTCAATTATTTGGGCCTACAGAATCCATAGAAATGTACAAACATTCCTGGTCAGATCTAAAATATAACTTGCACTCTCAAGGCGTGGGTTTAAAGTAGTCGGTAGTCGGGTCTCTCTTTTTAGTCTATGGGTTAGTTTGTTGTTGCTGCTGCTGCTATCTCCTTTTCATCTTACGGGGCTTTGCTTCACATACAATATCTAAGACTCTTCCAAGTTAAATTTATTTGTGTTTTCCATTTGCATTTTGATTTGAAGGCATATTTCAATGCTTTAACAACTCAAAATCCTTGGTAGCATTATACTTAAAAGTTCAGAATCTAAAGAATCTACTTTGAACTCTATCACATGCCATATTCTTTTTTGATAATCGTGTGTTGTGTGGTTAACATTTGCACGTTTGGATTAGAGGACAGCCACCACACAACTTAAGTTTCATGCGTTACTTAGAAGTAAGGAGAAAAACATGATTATTCCCTTCCCTCAATCAATGGCTCTTCTTTTGCCAAATTATCAAATTTGATGTTTGAAGCTAATTTAGCACATTTTACAGATTGAGTTGGAGGGAGGAACATGTATCTGATCAATGGGGAGCTTGCGCAGCCTAGTCAAGTTCAACATCTTTTCCACTCAGTGCAACTTAATGTTAATAATCCACACTTTTTTGATTATGTAAGGCCACATCACCAACGTCTTAAATATGAAACCACCGGAAATTTTATTTATGCTTGAGGAAGCTGTTGGGACAAGAATGTACGAGATGAAAAAAGTGGTTGCTTTAAAAACACTTGATAAGAAGCAAAATAAAGTAGATGAGATCAATAATCTTCTTACCCAAAAGATACTGCCGGCTCTAGAGAAGTTGAGGAAAGAACGAATACAATACATGCAATGGTCTAATGGCAATGCTAACTTAGGCTTAAGAGGTTATGCACAGCTTATGAATATTTGCAGGCTGAGAATGTAACGGATAATGCATTCGGTCAGGTAGAACAAATGAGGGCAAAGATTTCTAAGATTTATGACGGTACAGTAAGGATGCAATCGGAAATAAAAGATTTGGAGACAAAAATCACAACTCTGACTGCAGAAAAGGAAGCCAGTATGGGTGGTGAAGTAAAAAGTTTGACAGAGAAAGTAGACCTGCTATTTGAAGATCTGATTAGGGAAACGGCTGTATTAGATAATAAAGAAGACACTCTCAAGGGTGAAAGGAAAATGCTGACAAGGTTTCTGGCTTACAATCTCAAACATGATTTATATTGATCAAACTTCACGAACTTGATAGAAATTCTTAGAGTTATCTTTAGTTCATATAGAATTTCACATCTTTGGCTCGTTATTTAGATAAACTTATTCTAATTTTTAGATGTTGGCTTTGTTAGATGGTCAACAATATAGAAGATTTAAGGAAGTTTGCGGAAGAGAGAGCCTCTGCTGTTGTAGAAAGACAGAAGAAGGAGCATCTGATCTAAGAAAATCAGTTGAAAAGCTGTCTAAGGACATGGAAGGTTATGAGAAAGAATATCAGGTAACAGATGTGTTCATGTGTCAATATCAGGTAAAGCTTGTGTTGGAGTCTCACCCATACAAAGAGGGTCTGTTAGAAGCTTTACAAAAGGTCAGTGATATTTCTTTGATTTTCTGTACTAACTAATTAATGCATCAATATTGATTTGATTGATCATCCTGTTAATCTATATCTTTATGCAGGAACATGCATTTGAATTGGAGAGAGTACGGAAGTTGAAAGATGAGATACACAACCTTTCAGCACAATTATCTAGCCTTGAATTCAAGTAACACGACCCTATACAAAATTTTGATCAGTCAAAGGTCAAAGGCATAGTTGCAAAACTTATCAAAGGATAGCTCTGCAATGGCCGCCTTAGAGGTAGCTTGTTATAATTGTTGCAATTGATACTTATCTACTAGAATATGTGCTCTATTAAAAGCAAACTTACTATTTTCTCTACTATTAACGTACCTCTTTTGCAATCTACAGGTTGCTTTTAATAGAGAAATTCACACCAAAAGTGTTACATTTGAAAGTGACACTTTTCAGCCAAGTGGTTTACCGACTGGAGGAAGTTACAGGTATACCTCTAAACTCTCGTTTATATTTCTAGATTTAGTATGAGCTTTAAAGATTTTGGATCGGCATAAAAAACATGTGTTTCTTTCATACTGAAAATCTCTTGATTAGGTTCAAGGAACACCTTATGCCTCGACATGGGTATATGTTGATTGAAAATAGCATATTTGCCTTCAAGTTTTCATGGCTAAGATCCTTTCAAAATTTGAACTCAGCTTGTCAATTGTTGAGACAGCTTCATGATTTGGCTGGGATGGAAGCAGAACTTTCCACACATCAGAAAAAATTATCTGACATTGAAGCAAAGGTAAACTCTACAGTTTCTCTCGACTCTTATGAAAAGCAAGAAATATAAGCACGCCAATTAGTGGGAGATTTCTGCAAATATCTTTCTGAAGTTCATTGGTTGCACTTTATACCATTTCTTGGTTCTGAAAACAATAATGTCAATAGGTAATGCTTGGCTTTATAACATGATACACAGAATGAGGAATTTCTTAATGTAAACAGACAAATATAGAATGCTTGATTTCTCTCTATCTTTCCCTTTTCTTCTCTCTCAATCTCTCTCTGTGCATATACATACTGCATGACATGACGTATAGGGTCAAGATAAATTGATGTATGTTGATGATGCTGTTTTGAATTTGGAGGCAAGGTGGAAAAGTTTGGCAAGCATGTCCAGAAGTCATGTTTTAAGCTGTTACACAAGTTCTAGGTTGAGTTTTGGCAAGCTTCAAATAGTGGAAATGTTGATAAGTTGAAGTATTATATAATATTGGCAATTTTGTATTATTAACAAATAAGATATAGAGAAATTATTCTTTCAAACAGCGCAAACTTCGATAAGTTCAACTCTCTCCTTTTTAAGTATACAGTTGAAACTTTCTTCAAACTTCTAAAATGCTGAAACGGGTAATCTTGAATTTATTCTTCTTATGTTGAAATAACCAATATTTGTCTTCCTTTATCATGTGATGTTTATCTTAGTATTATTGCCAATTTACCTATCTACTACTTGTTGAAGGTTGCACAATTTTCATTAACACTCATGGATATTTAAAACTATTTCACTACTTCTTGGTGGCTAAATGCTTTTGGAAAGTTGAAGGCTGTTATGGTCATCTACCTATTTCAAAATTCTTATGTTTACTTGTTTTTAATTTGTTGTTTCATATTTCATATTTCAGAGATCCTTCCACTCCAGAAAAAACTTTGCAGACTTAATGCAAAATTAGAGTCTAAAATGCATGAGCTTTTGTTATGAGCAGAGCAAAATGTTCATCATAAGGCTGTATCACTTGTGAACTCTTTAGATAAGTTTAATGTTAGGACTTATGGTTAGATTGTAATTTGATGTTCAAGTCTCCTTATCTTGAACTCAATTTGTTTCGTCTTTTCATTATGTTCTCTTGGTGTCTTTTAAGTTTGGTGAATGGGTGAGGAAGATTGAGCAGGAGCTCGAAGAATTAAACGTTGCTGCTAAAGGAAAGGAACTTGAGTATAAAAATTGTGTAAATGATGTTTCATTGCTTGAAAAATCTATCAAAGAACATGGCAATGATGGAGATGGAACTCTAGAAAACCTCGAGCAAAAGATTAAGGCAACAAAATCTAAACTGCGGTCATATCTAAAGCATTTAAAGGTTCATGGATTCAAAAGAAATTAACAGACTAACTTTGGAAATAGAATGTTAATTGATGTCTAACCTGCAATCCTTTTTAACAAGTGGTTTTACTTGCTTATAGGGGCATGAAAATGAAAGGGAGAAGCTGGTCATGAAAATGGAAGCTGTTGTACAAGAGAAGGCTTTATTAGAGTCTGAATTAGATGCTTTGGAAACATTAGACTTTGGAAATAGAAGAACAGAGGTCAGTTACTTAAGCAAAAGTTAACAAGTGAGTAATTTTGTGTAAATCATTCGCCATCCTATATTAGTTTGTTCATGACTATTTTTCCCCATTGTCACTGAGCATCCTTTTTGATATTATATTTATCCAGTGACTTTGGTTCCACCTTTTCTACATTACTACCTAGGACCACGGTTAAGTTAGAGCCTCCAGAAGGTTGCATTTGGTGGTGTTTGGAGGCAGTCATTATCAGAATTAAGTGGAGGTCAACGATCTTTGTTGGCATTTTCTCTAATTTTAGCATTGCTTCTCTTCAAACCAGCTCCACTTTATATTGGATGAGATTTGTTCGATTTTCTTCACTATACTTGGTAAAATATTATTTACAATTCGATCAATAGATCATGTCTTTTATTTGAGATCTTAGTTTAGAAATTTGACGGAGGGTAGCTCCTCTAATTTACTTACTGGATGATTTACGCCTCTGTTTAGTACCTTTCCTTGATTTTTTTTTTTTTTTTTGTGCTAATTAGAATTTTCCCTTGGTTTCTCTGTCCTTTCCTCTCCTCCTTTTTTGTTTGTTTTTTTGTTTTTTTTTATTTTTTTTTTTTTTTTTGTGCTAATTAGAATTTTCCCTTGGTTTCTCTGTCCTTTCCTCTCCTCCTTTTTTTTTTGTTTTTTTGTTTTTTTTTAATTTTTTTTGGCTGCTCTCCCTTTTATTCCCTGTTTTTTCTTGGGGTTTGGGAATGGGTGCTCGTATGTTAAATATCTCACTGTGCTGCACTTCCCAAGTCTCAAAAGGTAAGAAAAAAGGGAAAGAGATAATCAATGGAAAGTATTCCATGGACAATTAGAAGGCATGGTGGAACTAATGTGATAAATATCATTGTTTTTTTCTTTAGTAGCACAGCTGAAAAGTGAGATGATATATTGTTTGATGATTTTTTATTGAATCAATGGGCTAATTGGAAGCTGAGAAAACTGCTTTTAATGTTTCTTCAGTGATAGTATCCACATGTTTATGTTAAAAAAGTAGCCAAAATAGACTGTTTACCTGTCTGTTTGCTTTCTCTGCTGACAATGACAGACATGGATCTCCCTTGTGGAACTCTCCAGTACTTTCTTTTTATGTCCTAATTGTTGTTTCACATGGTGGAAGCCATTTAAAGGTCTTCTAAATCAATCATTATGAAATTGAGTTCATCTTGAGGATTTATGGACTATGTATGAGCTTGTATCGTTGTTTGACTAAGGCTTGATCTTTCTTGAGTGAGAAATCTTCTTCGTATTTTATGATAAGACATTCTTCCTAATTCTTGAAAAATCCTTTTCCCATTTTTGTGCTAACATGTTCTAATTGTCCTCTATTAATATTTGCAAGCTAGAATTTTTTATTCATTGCGTCTCTTTTGGTTTAGTTTGTTTTACTCACTTCTGTCCCTATGAAGGAGGACATCTAGTCCTCATCAAATTGATATGCAACCATCATACTGCATTTCTTGATTGTCAGGTTGATGCAGCTCTTGATCCAAGCCCACATTCCCAGGTTTCTTTTCTTTTTTTTTTTTTTTTCTTGAAAAAATGTTTACCATACAGTTGCATTTCAGAAATAAAGCTTATAGGTTAATTAGTCATAAAAGAATCAAATTGTGAGATTTGAGATGGGACGACTTAGCATGAAATATTATTGAAACAAATGATTAATATTAGTAAATGTGTGAACTATCTGCTCATTTATATCAAAGCAGACAATGTTATGGTAGCTTATCCTTTTCATTTCACTAATCTTGCAGTTTATCGTGGTTCCACTCAAAGAACTAGAAGGCATGTTTGACAATGCCAGTGTACCTTTCCGGACCAAATTTGTAGACAGTGTTTCCTCTATTCGGAGAACAGTCACCGGTAAGCAAAACAAGTGATCCTCGTAGGTGTACAAGGTTGTCCTTTTGTTTCTTTCTTAATATATATATGTGGAAGCAATTATTTGGTTGTCATCCTGGTTGTCTCGTGTCTTTAATTTCATTAAAAAATCTCCTGACATGCCACTAATAATTCTAAACATTGCAATATCTAGTTTTGTGTTTTTCGTCACTATAAGTTTGTAGTAGTCTTTCATTTTCACAAACTATCATTTTTCTTGTCTTTTCATAACCATATTTTCATCCAAAAGTACTGTTGTTTAGCTGTCCATCAACGTAGTTGGTCATATCATAATCACTATAGATGATGTTGATGAAGTAGTGTCAAGTGTGTGCAGTCTAAATATACAATTAAATTAATTATAATCTAATTATTCCTATTCTATAGCTTCTCTTCATCTCATTCATTTCATTTCAAATAACAATTGAAGTTTTTCTTCATTTTTTTTTTCTGGTCTCTTTTTCTTTTAGGTTCTCTTCGATACTCATTTCAAAGAACATATTTTGAGGTTTCTTTTCTCTTTATTTTTAGTTTTCTCTCTTCGTTTTGTATTTTTATTTAATTTTTGTGTTAACTTCTTAATTATAATGAAGTATATTGCTAACTATTTTAATTTTTTAAATAGTATCCTTTAGTAACGTTCAAAAACTGGCTATAAGAGATAATTTTTTCTTTTTTAATGTTGTATTGTACAAACCATAATTCTTCCCCTTCTTTGTACTTTTAGCAAAATTATAGTTTTCATAATTTAGATGTAAAATACGATAAAACTCTTGCATTGTCTTTCAAAATATAAATATATAAATGAGTTAAATTTTCAAATTTCATATATCATATTAATTATTAATTAATGATTCGCTAATTTGAACTTGTAATACTTAAAAGTTAGTGAAATTGGGAAAAAAAGAATCAGGCAATACCAAATAATAATTATTATAGGATTTTAGGGCTTTGAAAATTTTAATAATTGTGCAACCTTTTTTCTACCTATAACAAGACAAAGAGCTCTAACTATTTCTTTTTCTAAAGAAAACTTTTGG

mRNA sequence

CAACTCAAGATTTTTTTTTCCATCTTCAACAAAAATATCTACCATTTTCTTTTCTCATTTTACAAAAACAAAATATCAAGATGTGATCCCTACTGAAGCAACAATAACTGTGGGCGTCCATTGGCTGATAAGTCGAAGAAGGTAGTCGTGAATGACAAGAATGGAAAACTCTAGAGGAGAAGGCTCATTCCATCCCATTTTGCTGTAAACGAACAATCTCATTATGATGATGTGTGGGTTCTTAATTATGGAGCGTCTTATCATGTGTGCCTGAACAGAGAGTGGTTTTCAACGTATCAAAAGAGGGAATGTTAGTATGCCTAATAGTATTATGTGCAAGATAGTTGGAATAGGCTCGGCCCTAATACGAAAAATATGATGGTGTCTTCTACACCTTGGATGAGGTTAGACATGTTCCATTAATAATGAAATGCTTGATATGTTAAAAGTGTTTAATTGCAAGGGTTGTAGTTTTAAAGGTAAAAGTCAAATCATGCATGTTTACAAGGGTTCTGAGAGGTGTGTGGGAAGTTTCATCGTATCAAGTTCCCAAGGGTGTTCATCGTAGGACACTTAATTGCAAGGGTTAGTAGTTTTAAAGGTAAAAGTCAAATCAGGCATGTTTACAAGGGTTCTGAGAGGTGTGTGGGAAGTTTCATCGCATCGAGTTCCCAAGAGTGTGTGTTCATCGTAGGACACTTAATTACATCTATTCAAATTGTCGAGGACTTTTCAAAGTTGAGTCTATTAGAGGCAACATGTACTTTATGTCTTTAATTGATATTAGTCAAGAATAACTTTGGTATGTATGATGAACCATAAGCGTGAAAGCTTCCAAAATTTCGAGTGGAAGACCTTGAGACTGGAAAGACGATCAAGCAAACTGCTAACGGTTTGGAATGATGTGGGTGTAAGTTCAATAATTTTGTAAAGCTAAAGGGAATGTCTATCATCATAGATGTTCAAAACTTAATGAGAATGCAAAATGTATAAATCAGATGTGAGTGCGGGGAGCGTGCTCTGTAATGCAGGGTTGGATAGAAGGTTTTGTGTAAAACTTGGTGTGGTCTGGTAACTCACTAGATTATTCTTTTTTTTCTTTTTTCGGGATGGGTTCAAATCCTACGCGACGACGGATTGTTGTTCCGGGTTTCAATCCTCACTTCAATGCAATTACTGGGCTGAACGCTTCTGGAAAGTCCAACATTCTAGATTCCATTTGCTTTGCTCTAGGAATTACTAATTTGCAGGAGTTTCGAGCTTCCAACCTTCAAGAGTTTGTGTGCAAGCAGGGGCAAGCAGATTGAGTTGGAGGGAGGAACATGTATCTGATCAATGGGGAGCTTGCGCAGCCTAGTCAAGTTCAACATCTTTTCCACTCAGTGCAACTTAATGTTAATAATCCACACTTTTTTGATTATGTAAGGCCACATCACCAACGTCTTAAATATGAAACCACCGGAAATTTTATTTATGCTTGAGGAAGCTGTTGGGACAAGAATGTACGAGATGAAAAAAGTGGTTGCTTTAAAAACACTTGATAAGAAGCAAAATAAAGTAGATGAGATCAATAATCTTCTTACCCAAAAGATACTGCCGGCTCTAGAGAAGTTGAGGAAAGAACGAATACAATACATGCAATGGTCTAATGGCAATGCTAACTTAGGCTTAAGAGGTTATGCACAGCTTATGAATATTTGCAGGCTGAGAATGTAACGGATAATGCATTCGGTCAGGTAGAACAAATGAGGGCAAAGATTTCTAAGATTTATGACGGTACAGTAAGGATGCAATCGGAAATAAAAGATTTGGAGACAAAAATCACAACTCTGACTGCAGAAAAGGAAGCCAGTATGGGTGGTGAAGTAAAAAGTTTGACAGAGAAAGTAGACCTGCTATTTGAAGATCTGATTAGGGAAACGGCTGTATTAGATAATAAAGAAGACACTCTCAAGGGTGAAAGGAAAATGCTGACAAGATGGTCAACAATATAGAAGATTTAAGGAAGTTTGCGGAAGAGAGAGCCTCTGCTGTTGTAGAAAGACAGAAGAAGGAGCATCTGATCTAAGAAAATCAGTTGAAAAGCTGTCTAAGGACATGGAAGGTTATGAGAAAGAATATCAGGTAACAGATGTGTTCATGTGTCAATATCAGGTAAAGCTTGTGTTGGAGTCTCACCCATACAAAGAGGGTCTGTTAGAAGCTTTACAAAAGGAACATGCATTTGAATTGGAGAGAGTACGGAAGTTGAAAGATGAGATACACAACCTTTCAGCACAATTATCTAGCCTTGAATTCAAGTAACACGACCCTATACAAAATTTTGATCAGTCAAAGGTCAAAGGCATAGTTGCAAAACTTATCAAAGGATAGCTCTGCAATGGCCGCCTTAGAGGTTGCTTTTAATAGAGAAATTCACACCAAAAGTGTTACATTTGAAAGTGACACTTTTCAGCCAAGTGGTTTACCGACTGGAGGAAGTTACAGGTTCAAGGAACACCTTATGCCTCGACATGGGTATATGTTGATTGAAAATAGCATATTTGCCTTCAAGTTTTCATGGCTAAGATCCTTTCAAAATTTGAACTCAGCTTGTCAATTGTTGAGACAGCTTCATGATTTGGCTGGGATGGAAGCAGAACTTTCCACACATCAGAAAAAATTATCTGACATTGAAGCAAAGTTTGGTGAATGGGTGAGGAAGATTGAGCAGGAGCTCGAAGAATTAAACGTTGCTGCTAAAGGAAAGGAACTTGAGTATAAAAATTGTGTAAATGATGTTTCATTGCTTGAAAAATCTATCAAAGAACATGGCAATGATGGAGATGGAACTCTAGAAAACCTCGAGCAAAAGATTAAGGCAACAAAATCTAAACTGCGGTCATATCTAAAGCATTTAAAGGGGCATGAAAATGAAAGGGAGAAGCTGGTCATGAAAATGGAAGCTGTTGTACAAGAGAAGGCTTTATTAGAGTCTGAATTAGATGCTTTGGAAACATTAGACTTTGGAAATAGAAGAACAGAGGTTGATGCAGCTCTTGATCCAAGCCCACATTCCCAGTTTATCGTGGTTCCACTCAAAGAACTAGAAGGCATGTTTGACAATGCCAGTGTACCTTTCCGGACCAAATTTGTAGACAGTGTTTCCTCTATTCGGAGAACAGTCACCGGTTCTCTTCGATACTCATTTCAAAGAACATATTTTGAGGTTTCTTTTCTCTTTATTTTTAGTTTTCTCTCTTCGTTTTGTATTTTTATTTAATTTTTGTGTTAACTTCTTAATTATAATGAAGTATATTGCTAACTATTTTAATTTTTTAAATAGTATCCTTTAGTAACGTTCAAAAACTGGCTATAAGAGATAATTTTTTCTTTTTTAATGTTGTATTGTACAAACCATAATTCTTCCCCTTCTTTGTACTTTTAGCAAAATTATAGTTTTCATAATTTAGATGTAAAATACGATAAAACTCTTGCATTGTCTTTCAAAATATAAATATATAAATGAGTTAAATTTTCAAATTTCATATATCATATTAATTATTAATTAATGATTCGCTAATTTGAACTTGTAATACTTAAAAGTTAGTGAAATTGGGAAAAAAAGAATCAGGCAATACCAAATAATAATTATTATAGGATTTTAGGGCTTTGAAAATTTTAATAATTGTGCAACCTTTTTTCTACCTATAACAAGACAAAGAGCTCTAACTATTTCTTTTTCTAAAGAAAACTTTTGG

Coding sequence (CDS)

ATGGCCGCCTTAGAGGTTGCTTTTAATAGAGAAATTCACACCAAAAGTGTTACATTTGAAAGTGACACTTTTCAGCCAAGTGGTTTACCGACTGGAGGAAGTTACAGGTTCAAGGAACACCTTATGCCTCGACATGGGTATATGTTGATTGAAAATAGCATATTTGCCTTCAAGTTTTCATGGCTAAGATCCTTTCAAAATTTGAACTCAGCTTGTCAATTGTTGAGACAGCTTCATGATTTGGCTGGGATGGAAGCAGAACTTTCCACACATCAGAAAAAATTATCTGACATTGAAGCAAAGTTTGGTGAATGGGTGAGGAAGATTGAGCAGGAGCTCGAAGAATTAAACGTTGCTGCTAAAGGAAAGGAACTTGAGTATAAAAATTGTGTAAATGATGTTTCATTGCTTGAAAAATCTATCAAAGAACATGGCAATGATGGAGATGGAACTCTAGAAAACCTCGAGCAAAAGATTAAGGCAACAAAATCTAAACTGCGGTCATATCTAAAGCATTTAAAGGGGCATGAAAATGAAAGGGAGAAGCTGGTCATGAAAATGGAAGCTGTTGTACAAGAGAAGGCTTTATTAGAGTCTGAATTAGATGCTTTGGAAACATTAGACTTTGGAAATAGAAGAACAGAGGTTGATGCAGCTCTTGATCCAAGCCCACATTCCCAGTTTATCGTGGTTCCACTCAAAGAACTAGAAGGCATGTTTGACAATGCCAGTGTACCTTTCCGGACCAAATTTGTAGACAGTGTTTCCTCTATTCGGAGAACAGTCACCGGTTCTCTTCGATACTCATTTCAAAGAACATATTTTGAGGTTTCTTTTCTCTTTATTTTTAGTTTTCTCTCTTCGTTTTGTATTTTTATTTAA

Protein sequence

MAALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSWLRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEAKFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIKEHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELDALETLDFGNRRTEVDAALDPSPHSQFIVVPLKELEGMFDNASVPFRTKFVDSVSSIRRTVTGSLRYSFQRTYFEVSFLFIFSFLSSFCIFI

Homology

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BLAST of CcUC07G145270 vs. NCBI nr
Match: KAA0067664.1 (structural maintenance of chromosomes protein 2-1-like [Cucumis melo var. makuwa] >TYK23668.1 structural maintenance of chromosomes protein 2-1-like [Cucumis melo var. makuwa])

HSP 1 Score: 211.8 bits (538), Expect = 7.7e-51
Identity = 140/271 (51.66%), Postives = 158/271 (58.30%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREIHT SVT E D FQPSGL TGGS +                         
Sbjct: 633 AAKEVAFNREIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 692

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLAGMEAELSTHQKKLSDIEA                     
Sbjct: 693 --------GGGQLLRQLHDLAGMEAELSTHQKKLSDIEAKISDILPLQKKFADLKTKLEL 752

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K GE V++IEQ+LEE   AAKGKELEYK+ VN VSLLEKSIK
Sbjct: 753 KMHDLSLFQTRAEENVHHKLGELVKRIEQDLEESKAAAKGKELEYKDRVNAVSLLEKSIK 812

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 228
           EH N+ +G L+NLEQKIK TKSKL+S LK LKGHENEREKLVMKMEAV+QEKA LE+EL 
Sbjct: 813 EHDNNREGRLKNLEQKIKTTKSKLQSCLKDLKGHENEREKLVMKMEAVIQEKASLEAELV 870

[Close]

BLAST of CcUC07G145270 vs. NCBI nr
Match: XP_008439082.1 (PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 2-1-like [Cucumis melo])

HSP 1 Score: 211.8 bits (538), Expect = 7.7e-51
Identity = 140/271 (51.66%), Postives = 158/271 (58.30%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREIHT SVT E D FQPSGL TGGS +                         
Sbjct: 633 AAKEVAFNREIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 692

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLAGMEAELSTHQKKLSDIEA                     
Sbjct: 693 --------GGGQLLRQLHDLAGMEAELSTHQKKLSDIEAKISDILPLQKKFADLKTKLEL 752

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K GE V++IEQ+LEE   AAKGKELEYK+ VN VSLLEKSIK
Sbjct: 753 KMHDLSLFQTRAEENVHHKLGELVKRIEQDLEESKAAAKGKELEYKDRVNAVSLLEKSIK 812

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 228
           EH N+ +G L+NLEQKIK TKSKL+S LK LKGHENEREKLVMKMEAV+QEKA LE+EL 
Sbjct: 813 EHDNNREGRLKNLEQKIKTTKSKLQSCLKDLKGHENEREKLVMKMEAVIQEKASLEAELV 870

[Close]

BLAST of CcUC07G145270 vs. NCBI nr
Match: XP_038876915.1 (structural maintenance of chromosomes protein 2-1-like [Benincasa hispida])

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-49
Identity = 141/271 (52.03%), Postives = 156/271 (57.56%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREIHT SVT E D FQPSGL TGGS +                         
Sbjct: 633 AAKEVAFNREIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 692

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLA MEAELSTHQKKLSDIEA                     
Sbjct: 693 --------GGGQLLRQLHDLARMEAELSTHQKKLSDIEAKISDILPLQKKFADLKAKLEL 752

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K GE V++IEQELEE   AAKGKELEYK+ VN VSLLEKSIK
Sbjct: 753 KTYDLSLFQKRAEENVHHKLGESVKRIEQELEESKAAAKGKELEYKDRVNAVSLLEKSIK 812

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 228
           EH N+  G L+ LEQKIKATKSKL+S LK LKGHENEREKLVMKMEAVVQEKA LE+EL 
Sbjct: 813 EHDNNRHGRLKKLEQKIKATKSKLQSCLKDLKGHENEREKLVMKMEAVVQEKASLEAELV 870

[Close]

BLAST of CcUC07G145270 vs. NCBI nr
Match: AKU77090.1 (structural maintenance of chromosomes protein 2, partial [Cucumis sativus])

HSP 1 Score: 208.0 bits (528), Expect = 1.1e-49
Identity = 133/235 (56.60%), Postives = 145/235 (61.70%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNR IHT SVT E D FQPSGL TGGS +                         
Sbjct: 554 AAKEVAFNRGIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 613

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLAGMEAELSTHQKKLSDIEA                     
Sbjct: 614 --------GGGQLLRQLHDLAGMEAELSTHQKKLSDIEAKISDILPLQKKFADLKAKLEL 673

Query: 122 ---------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIKEHGNDGDGT 181
                    K GE V++IEQ+LEE   AAKGKELEYK+ VN V LLEKSIKEH N+ +G 
Sbjct: 674 KMHDENVHHKLGELVKRIEQDLEESKAAAKGKELEYKDRVNAVLLLEKSIKEHDNNREGR 733

Query: 182 LENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELDALET 207
           L+NLEQKIK TKSKL+S LK LKGHENEREKLVMKMEAV+QEKA LE+EL AL+T
Sbjct: 734 LKNLEQKIKGTKSKLQSCLKDLKGHENEREKLVMKMEAVIQEKASLEAELVALKT 755

[Close]

BLAST of CcUC07G145270 vs. NCBI nr
Match: XP_022141054.1 (structural maintenance of chromosomes protein 2-1-like isoform X2 [Momordica charantia])

HSP 1 Score: 206.8 bits (525), Expect = 2.5e-49
Identity = 132/244 (54.10%), Postives = 148/244 (60.66%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREIHT SVT E D FQPSGL TGGS +                         
Sbjct: 633 AAKEVAFNREIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 692

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLAGMEAELS HQ+KLS+IEA                     
Sbjct: 693 --------GGGQLLRQLHDLAGMEAELSIHQRKLSEIEAKISEILPLQKKFVDLKAQLEL 752

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K GE V++IEQELEE   AAKGKELEYK+CVN VSLLEKSIK
Sbjct: 753 KMYDLSLFQTRAEQNEHHKLGESVKRIEQELEEAKAAAKGKELEYKDCVNAVSLLEKSIK 812

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 207
           EH N+ +G L++LEQKIKATKSKL+S LK LKGHENEREKLVM+M+AVVQEKA LE++L 
Sbjct: 813 EHDNNREGRLKDLEQKIKATKSKLQSCLKDLKGHENEREKLVMEMDAVVQEKASLEAQLA 843

[Close]

BLAST of CcUC07G145270 vs. ExPASy Swiss-Prot
Match: Q9SN90 (Structural maintenance of chromosomes protein 2-2 OS=Arabidopsis thaliana OX=3702 GN=SMC2-2 PE=2 SV=1)

HSP 1 Score: 149.4 bits (376), Expect = 6.2e-35
Identity = 103/262 (39.31%), Postives = 134/262 (51.15%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREI T SVT E D FQPSGL TGGS +                         
Sbjct: 630 AAKEVAFNREIRTPSVTLEGDVFQPSGLLTGGSRK------------------------- 689

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                       LLRQLHDLA  E +   HQK LS+IEA                     
Sbjct: 690 --------GGGDLLRQLHDLAEAETKFRAHQKSLSEIEANIKELQPLQTKFTDMKAQLEL 749

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K G+ V+K+E+E+EE+    K KE  YK+C + VS LEKSIK
Sbjct: 750 KMYDMSLFLKRAEQNEHHKLGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIK 809

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 219
           +H  + +G L++LE+ IK  K+++++  K LKGHEN RE+LVM+ EAV QE++ L+S+L 
Sbjct: 810 DHDKNREGRLKDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLT 858

HSP 2 Score: 62.8 bits (151), Expect = 7.6e-09
Identity = 38/62 (61.29%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 215  EVDAALDPS-------------PHSQFIVVPLKELEGMFDNASVPFRTKFVDSVSSIRRT 264
            EVDAALD S             PHSQFIVV LK  EGMF NA V FRTKFVD VS+++RT
Sbjct: 1109 EVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLK--EGMFSNADVLFRTKFVDGVSTVQRT 1168

[Close]

BLAST of CcUC07G145270 vs. ExPASy Swiss-Prot
Match: Q9C5Y4 (Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis thaliana OX=3702 GN=SMC2-1 PE=2 SV=2)

HSP 1 Score: 142.1 bits (357), Expect = 9.8e-33
Identity = 100/261 (38.31%), Postives = 132/261 (50.57%), Query Frame = 0


Query: 3   ALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSWL 62
           A EVAFNR+I T SVT E D FQPSGL TGGS +                          
Sbjct: 634 AKEVAFNRDIRTPSVTLEGDIFQPSGLLTGGSRK-------------------------- 693

Query: 63  RSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA---------------------- 122
                       LR+LHDLA  E+EL  HQK+L+D+E+                      
Sbjct: 694 -------GGGDRLRKLHDLAEAESELQGHQKRLADVESQIKELQPLQMKFTDVYAQLELK 753

Query: 123 -----------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIKE 182
                            K GE V+K+E+ELEE     K KEL YKNC + VS LE SIK+
Sbjct: 754 TYDLSLFLKRAEQNEHHKLGEAVKKLEEELEEAKSQIKEKELAYKNCFDAVSKLENSIKD 813

Query: 183 HGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELDA 219
           H  + +G L++LE+ IK  K+++++  K LK HENE+EKLVM+ EA+ QE++ LES L +
Sbjct: 814 HDKNREGRLKDLEKNIKTIKAQMQAASKDLKSHENEKEKLVMEEEAMKQEQSSLESHLTS 861

HSP 2 Score: 63.5 bits (153), Expect = 4.4e-09
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 215  EVDAALDPS-------------PHSQFIVVPLKELEGMFDNASVPFRTKFVDSVSSIRRT 264
            EVDAALD S             PHSQFIVV LK  EGMF+NA+V FRTKFVD VS+++RT
Sbjct: 1112 EVDAALDLSHTQNIGRMIRAHFPHSQFIVVSLK--EGMFNNANVLFRTKFVDGVSTVQRT 1171

[Close]

BLAST of CcUC07G145270 vs. ExPASy Swiss-Prot
Match: Q90988 (Structural maintenance of chromosomes protein 2 OS=Gallus gallus OX=9031 GN=SMC2 PE=2 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06
Identity = 54/220 (24.55%), Postives = 100/220 (45.45%), Query Frame = 0


Query: 3   ALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMP----------RHGYMLIEN 62
           A +V F++ I  K+VT + D F P G  +GG+     H+ P              + I+ 
Sbjct: 636 AKKVTFDKRIMRKTVTLQGDIFDPQGTLSGGA---SSHVTPILSKLKTMRDAEDELKIKT 695

Query: 63  SIFAFKFSWLRSFQNLNSACQLLRQLHDLAGMEAEL-------STHQKKLSDIEAKFGEW 122
           S        L + +N+    Q L+Q  ++   EAEL       S + K+  D+ A   + 
Sbjct: 696 SQLEATEKELANLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQEDLLA-LKKT 755

Query: 123 VRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIKEHGNDGDGTLENLEQKIKATKSK 182
           + + E+ L++   + +  E EYK        LE  +K    +    ++N +QK+ + K K
Sbjct: 756 IAECEETLKKTEESQRKAEEEYK-------ALENKMKNAEAERGKEIKNAQQKLNSAKKK 815

Query: 183 LRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELDALE 206
                + +K  + E E LV+++E + QE+A  + + +A +
Sbjct: 816 ADDSSRKMKEKQQEVEALVLELEQLKQEQASYKQQSEAAQ 844

[Close]

BLAST of CcUC07G145270 vs. ExPASy Swiss-Prot
Match: P38989 (Structural maintenance of chromosomes protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=SMC2 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 6.0e-06
Identity = 52/212 (24.53%), Postives = 96/212 (45.28%), Query Frame = 0


Query: 3   ALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLM-PRHGYMLIENSIFAFKFSW 62
           A ++ F+ +I  +S+T + D + P G  +GGS    E L+     Y  I+  I   +   
Sbjct: 638 AKKITFHPKIRARSITLQGDVYDPEGTLSGGSRNTSESLLVDIQKYNQIQKQIETIQADL 697

Query: 63  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLS--DIEAKFGEWV----RKIEQELEE 122
               + L +     ++   +   +  LS H+  L+  +++A     +     +I +++ E
Sbjct: 698 NHVTEELQTQYATSQKTKTIQS-DLNLSLHKLDLAKRNLDANPSSQIIARNEEILRDIGE 757

Query: 123 LNVAAKGKELEYKNCVNDVSLLEKSIKEHGNDGDGTLENLEQKIKATKSKLRSYLKHLKG 182
                K K++  K C  +VS +EK +KE+ +D    L  L       K +L+   K L+ 
Sbjct: 758 CENEIKTKQMSLKKCQEEVSTIEKDMKEYDSDKGSKLNEL-------KKELKLLAKELEE 817

Query: 183 HENEREKLVMKMEAVVQEKALLESELDALETL 208
            E+E E+     + +  E   L SELD+ +TL
Sbjct: 818 QESESERKYDLFQNLELETEQLSSELDSNKTL 841

[Close]

BLAST of CcUC07G145270 vs. ExPASy Swiss-Prot
Match: P50533 (Structural maintenance of chromosomes protein 2 OS=Xenopus laevis OX=8355 GN=smc2 PE=1 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 3.9e-05
Identity = 48/210 (22.86%), Postives = 98/210 (46.67%), Query Frame = 0


Query: 3   ALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYML-IENSIFAFKFSW 62
           A +V F++ I TK+VT   DTF P G  +GG+      ++ R   +  +++ + A +   
Sbjct: 637 AKKVTFDKRIMTKTVTLGGDTFDPQGTLSGGARSQNASVLVRLQELKDVQDELKAKETEL 696

Query: 63  ------LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEAKFGEWVRKIEQELEE 122
                 L + +N     + L+Q  ++   EAEL   + + S    K  E +  ++Q +EE
Sbjct: 697 QEVEKELMTLKNTVERYRQLKQQWEMKSEEAELLQTKLQQSSYH-KQQEELDSLKQTIEE 756

Query: 123 LNVAAKGKELEYKNCVNDVSLLEKSIKEHGNDGDGTLENLEQKIKATKSKLRSYLKHLKG 182
                K  +   K       +LE  +K    + +  L+  +QK+   K K  +  K +K 
Sbjct: 757 SEETLKNTKEVQKKAEEKFKVLEHKMKNAEAERERELKEAQQKLDTAKKKADASNKKMKE 816

Query: 183 HENEREKLVMKMEAVVQEKALLESELDALE 206
            + E + LV+++E + +E+   + +++ ++
Sbjct: 817 KQQEVDALVLELEELKREQTTYKQQIETVD 845

[Close]

BLAST of CcUC07G145270 vs. ExPASy TrEMBL
Match: A0A5D3DJK7 (Structural maintenance of chromosomes protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold577G00340 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51
Identity = 140/271 (51.66%), Postives = 158/271 (58.30%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREIHT SVT E D FQPSGL TGGS +                         
Sbjct: 633 AAKEVAFNREIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 692

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLAGMEAELSTHQKKLSDIEA                     
Sbjct: 693 --------GGGQLLRQLHDLAGMEAELSTHQKKLSDIEAKISDILPLQKKFADLKTKLEL 752

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K GE V++IEQ+LEE   AAKGKELEYK+ VN VSLLEKSIK
Sbjct: 753 KMHDLSLFQTRAEENVHHKLGELVKRIEQDLEESKAAAKGKELEYKDRVNAVSLLEKSIK 812

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 228
           EH N+ +G L+NLEQKIK TKSKL+S LK LKGHENEREKLVMKMEAV+QEKA LE+EL 
Sbjct: 813 EHDNNREGRLKNLEQKIKTTKSKLQSCLKDLKGHENEREKLVMKMEAVIQEKASLEAELV 870

[Close]

BLAST of CcUC07G145270 vs. ExPASy TrEMBL
Match: A0A1S3AXY4 (Structural maintenance of chromosomes protein OS=Cucumis melo OX=3656 GN=LOC103483977 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 3.7e-51
Identity = 140/271 (51.66%), Postives = 158/271 (58.30%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREIHT SVT E D FQPSGL TGGS +                         
Sbjct: 633 AAKEVAFNREIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 692

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLAGMEAELSTHQKKLSDIEA                     
Sbjct: 693 --------GGGQLLRQLHDLAGMEAELSTHQKKLSDIEAKISDILPLQKKFADLKTKLEL 752

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K GE V++IEQ+LEE   AAKGKELEYK+ VN VSLLEKSIK
Sbjct: 753 KMHDLSLFQTRAEENVHHKLGELVKRIEQDLEESKAAAKGKELEYKDRVNAVSLLEKSIK 812

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 228
           EH N+ +G L+NLEQKIK TKSKL+S LK LKGHENEREKLVMKMEAV+QEKA LE+EL 
Sbjct: 813 EHDNNREGRLKNLEQKIKTTKSKLQSCLKDLKGHENEREKLVMKMEAVIQEKASLEAELV 870

[Close]

BLAST of CcUC07G145270 vs. ExPASy TrEMBL
Match: A0A0K1NZC9 (Structural maintenance of chromosomes protein 2 (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 208.0 bits (528), Expect = 5.4e-50
Identity = 133/235 (56.60%), Postives = 145/235 (61.70%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNR IHT SVT E D FQPSGL TGGS +                         
Sbjct: 554 AAKEVAFNRGIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 613

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLAGMEAELSTHQKKLSDIEA                     
Sbjct: 614 --------GGGQLLRQLHDLAGMEAELSTHQKKLSDIEAKISDILPLQKKFADLKAKLEL 673

Query: 122 ---------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIKEHGNDGDGT 181
                    K GE V++IEQ+LEE   AAKGKELEYK+ VN V LLEKSIKEH N+ +G 
Sbjct: 674 KMHDENVHHKLGELVKRIEQDLEESKAAAKGKELEYKDRVNAVLLLEKSIKEHDNNREGR 733

Query: 182 LENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELDALET 207
           L+NLEQKIK TKSKL+S LK LKGHENEREKLVMKMEAV+QEKA LE+EL AL+T
Sbjct: 734 LKNLEQKIKGTKSKLQSCLKDLKGHENEREKLVMKMEAVIQEKASLEAELVALKT 755

[Close]

BLAST of CcUC07G145270 vs. ExPASy TrEMBL
Match: A0A6J1CJE8 (Structural maintenance of chromosomes protein OS=Momordica charantia OX=3673 GN=LOC111011547 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 132/244 (54.10%), Postives = 148/244 (60.66%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREIHT SVT E D FQPSGL TGGS +                         
Sbjct: 633 AAKEVAFNREIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 692

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLAGMEAELS HQ+KLS+IEA                     
Sbjct: 693 --------GGGQLLRQLHDLAGMEAELSIHQRKLSEIEAKISEILPLQKKFVDLKAQLEL 752

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K GE V++IEQELEE   AAKGKELEYK+CVN VSLLEKSIK
Sbjct: 753 KMYDLSLFQTRAEQNEHHKLGESVKRIEQELEEAKAAAKGKELEYKDCVNAVSLLEKSIK 812

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 207
           EH N+ +G L++LEQKIKATKSKL+S LK LKGHENEREKLVM+M+AVVQEKA LE++L 
Sbjct: 813 EHDNNREGRLKDLEQKIKATKSKLQSCLKDLKGHENEREKLVMEMDAVVQEKASLEAQLA 843

[Close]

BLAST of CcUC07G145270 vs. ExPASy TrEMBL
Match: A0A6J1CHH2 (structural maintenance of chromosomes protein 2-1-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111011547 PE=3 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 132/244 (54.10%), Postives = 148/244 (60.66%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREIHT SVT E D FQPSGL TGGS +                         
Sbjct: 633 AAKEVAFNREIHTPSVTLEGDIFQPSGLLTGGSRK------------------------- 692

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                      QLLRQLHDLAGMEAELS HQ+KLS+IEA                     
Sbjct: 693 --------GGGQLLRQLHDLAGMEAELSIHQRKLSEIEAKISEILPLQKKFVDLKAQLEL 752

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K GE V++IEQELEE   AAKGKELEYK+CVN VSLLEKSIK
Sbjct: 753 KMYDLSLFQTRAEQNEHHKLGESVKRIEQELEEAKAAAKGKELEYKDCVNAVSLLEKSIK 812

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 207
           EH N+ +G L++LEQKIKATKSKL+S LK LKGHENEREKLVM+M+AVVQEKA LE++L 
Sbjct: 813 EHDNNREGRLKDLEQKIKATKSKLQSCLKDLKGHENEREKLVMEMDAVVQEKASLEAQLA 843

[Close]

BLAST of CcUC07G145270 vs. TAIR 10
Match: AT3G47460.1 (Structural maintenance of chromosomes (SMC) family protein )

HSP 1 Score: 149.4 bits (376), Expect = 4.4e-36
Identity = 103/262 (39.31%), Postives = 134/262 (51.15%), Query Frame = 0


Query: 2   AALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSW 61
           AA EVAFNREI T SVT E D FQPSGL TGGS +                         
Sbjct: 630 AAKEVAFNREIRTPSVTLEGDVFQPSGLLTGGSRK------------------------- 689

Query: 62  LRSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA--------------------- 121
                       LLRQLHDLA  E +   HQK LS+IEA                     
Sbjct: 690 --------GGGDLLRQLHDLAEAETKFRAHQKSLSEIEANIKELQPLQTKFTDMKAQLEL 749

Query: 122 ------------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIK 181
                             K G+ V+K+E+E+EE+    K KE  YK+C + VS LEKSIK
Sbjct: 750 KMYDMSLFLKRAEQNEHHKLGDAVKKLEEEVEEMRSQIKEKEGLYKSCADTVSTLEKSIK 809

Query: 182 EHGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELD 219
           +H  + +G L++LE+ IK  K+++++  K LKGHEN RE+LVM+ EAV QE++ L+S+L 
Sbjct: 810 DHDKNREGRLKDLEKNIKTLKARIQASSKDLKGHENVRERLVMEQEAVTQEQSYLKSQLT 858

HSP 2 Score: 62.8 bits (151), Expect = 5.4e-10
Identity = 38/62 (61.29%), Postives = 41/62 (66.13%), Query Frame = 0


Query: 215  EVDAALDPS-------------PHSQFIVVPLKELEGMFDNASVPFRTKFVDSVSSIRRT 264
            EVDAALD S             PHSQFIVV LK  EGMF NA V FRTKFVD VS+++RT
Sbjct: 1109 EVDAALDLSHTQNIGRMIKSHFPHSQFIVVSLK--EGMFSNADVLFRTKFVDGVSTVQRT 1168

[Close]

BLAST of CcUC07G145270 vs. TAIR 10
Match: AT5G62410.1 (structural maintenance of chromosomes 2 )

HSP 1 Score: 142.1 bits (357), Expect = 7.0e-34
Identity = 100/261 (38.31%), Postives = 132/261 (50.57%), Query Frame = 0


Query: 3   ALEVAFNREIHTKSVTFESDTFQPSGLPTGGSYRFKEHLMPRHGYMLIENSIFAFKFSWL 62
           A EVAFNR+I T SVT E D FQPSGL TGGS +                          
Sbjct: 634 AKEVAFNRDIRTPSVTLEGDIFQPSGLLTGGSRK-------------------------- 693

Query: 63  RSFQNLNSACQLLRQLHDLAGMEAELSTHQKKLSDIEA---------------------- 122
                       LR+LHDLA  E+EL  HQK+L+D+E+                      
Sbjct: 694 -------GGGDRLRKLHDLAEAESELQGHQKRLADVESQIKELQPLQMKFTDVYAQLELK 753

Query: 123 -----------------KFGEWVRKIEQELEELNVAAKGKELEYKNCVNDVSLLEKSIKE 182
                            K GE V+K+E+ELEE     K KEL YKNC + VS LE SIK+
Sbjct: 754 TYDLSLFLKRAEQNEHHKLGEAVKKLEEELEEAKSQIKEKELAYKNCFDAVSKLENSIKD 813

Query: 183 HGNDGDGTLENLEQKIKATKSKLRSYLKHLKGHENEREKLVMKMEAVVQEKALLESELDA 219
           H  + +G L++LE+ IK  K+++++  K LK HENE+EKLVM+ EA+ QE++ LES L +
Sbjct: 814 HDKNREGRLKDLEKNIKTIKAQMQAASKDLKSHENEKEKLVMEEEAMKQEQSSLESHLTS 861

HSP 2 Score: 63.5 bits (153), Expect = 3.2e-10
Identity = 38/62 (61.29%), Postives = 43/62 (69.35%), Query Frame = 0


Query: 215  EVDAALDPS-------------PHSQFIVVPLKELEGMFDNASVPFRTKFVDSVSSIRRT 264
            EVDAALD S             PHSQFIVV LK  EGMF+NA+V FRTKFVD VS+++RT
Sbjct: 1112 EVDAALDLSHTQNIGRMIRAHFPHSQFIVVSLK--EGMFNNANVLFRTKFVDGVSTVQRT 1171

The following BLAST results are available for this feature:

BLAST of CcUC07G145270 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0067664.1	7.7e-51	51.66	structural maintenance of chromosomes protein 2-1-like [Cucumis melo var. makuwa...	[more]
XP_008439082.1	7.7e-51	51.66	PREDICTED: LOW QUALITY PROTEIN: structural maintenance of chromosomes protein 2-...	[more]
XP_038876915.1	1.1e-49	52.03	structural maintenance of chromosomes protein 2-1-like [Benincasa hispida]	[more]
AKU77090.1	1.1e-49	56.60	structural maintenance of chromosomes protein 2, partial [Cucumis sativus]	[more]
XP_022141054.1	2.5e-49	54.10	structural maintenance of chromosomes protein 2-1-like isoform X2 [Momordica cha...	[more]

BLAST of CcUC07G145270 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SN90	6.2e-35	39.31	Structural maintenance of chromosomes protein 2-2 OS=Arabidopsis thaliana OX=370...	[more]
Q9C5Y4	9.8e-33	38.31	Structural maintenance of chromosomes protein 2-1 OS=Arabidopsis thaliana OX=370...	[more]
Q90988	1.6e-06	24.55	Structural maintenance of chromosomes protein 2 OS=Gallus gallus OX=9031 GN=SMC2...	[more]
P38989	6.0e-06	24.53	Structural maintenance of chromosomes protein 2 OS=Saccharomyces cerevisiae (str...	[more]
P50533	3.9e-05	22.86	Structural maintenance of chromosomes protein 2 OS=Xenopus laevis OX=8355 GN=smc...	[more]

BLAST of CcUC07G145270 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3DJK7	3.7e-51	51.66	Structural maintenance of chromosomes protein OS=Cucumis melo var. makuwa OX=119...	[more]
A0A1S3AXY4	3.7e-51	51.66	Structural maintenance of chromosomes protein OS=Cucumis melo OX=3656 GN=LOC1034...	[more]
A0A0K1NZC9	5.4e-50	56.60	Structural maintenance of chromosomes protein 2 (Fragment) OS=Cucumis sativus OX...	[more]
A0A6J1CJE8	1.2e-49	54.10	Structural maintenance of chromosomes protein OS=Momordica charantia OX=3673 GN=...	[more]
A0A6J1CHH2	1.2e-49	54.10	structural maintenance of chromosomes protein 2-1-like isoform X2 OS=Momordica c...	[more]

BLAST of CcUC07G145270 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G47460.1	4.4e-36	39.31	Structural maintenance of chromosomes (SMC) family protein	[more]
AT5G62410.1	7.0e-34	38.31	structural maintenance of chromosomes 2	[more]

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 81..101
None	No IPR available	COILS	Coil	Coil	coord: 152..207
None	No IPR available	COILS	Coil	Coil	coord: 106..126
None	No IPR available	PANTHER	PTHR43941:SF3	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2-2	coord: 224..263 coord: 69..104 coord: 101..218
None	No IPR available	PANTHER	PTHR43941:SF3	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2-2	coord: 2..39
None	No IPR available	PANTHER	PTHR43941	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2	coord: 224..263 coord: 69..104 coord: 101..218
None	No IPR available	PANTHER	PTHR43941	STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 2	coord: 2..39

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G145270.1	CcUC07G145270.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007049	cell cycle
biological_process	GO:0051276	chromosome organization
cellular_component	GO:0005694	chromosome