CcUC07G142390 (gene) Watermelon (PI 537277) v1

Overview
NameCcUC07G142390
Typegene
OrganismCitrullus colocynthis (Watermelon (PI 537277) v1)
DescriptionUnknown protein
LocationCicolChr07: 28507417 .. 28507788 (+)
RNA-Seq ExpressionCcUC07G142390
SyntenyCcUC07G142390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTCAAAGCAATGAGCAGGAGGAAGGGCAGTCAGCGGCAGGATCGCGGTCGGGGATGCGTCAGGGGATTCAATTTCGGAGGCGACGAATGCCGGTGGCACGACTCGGGGGGAAGAGATCGGGGCGGATCATGGCGTGGGGGAGGATGCTGAGGAAGATAAGACTGAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATTAAAAAATACTATACAAAGTTGATGAAGGATATAGTGGAAGGAGGAGTATATGGCTATCCTGACTCATATCAACATAGGCTTCTCTTGGAGACTTCTTTTGCAATTCCAATCCTCGGTGTCTCTTTCTCTACTCATTCCAGTATTCTTGCCACAACTTCTTAA

mRNA sequence

ATGGCTCAAAGCAATGAGCAGGAGGAAGGGCAGTCAGCGGCAGGATCGCGGTCGGGGATGCGTCAGGGGATTCAATTTCGGAGGCGACGAATGCCGGTGGCACGACTCGGGGGGAAGAGATCGGGGCGGATCATGGCGTGGGGGAGGATGCTGAGGAAGATAAGACTGAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATTAAAAAATACTATACAAAGTTGATGAAGGATATAGTGGAAGGAGGAGTATATGGCTATCCTGACTCATATCAACATAGGCTTCTCTTGGAGACTTCTTTTGCAATTCCAATCCTCGGTGTCTCTTTCTCTACTCATTCCAGTATTCTTGCCACAACTTCTTAA

Coding sequence (CDS)

ATGGCTCAAAGCAATGAGCAGGAGGAAGGGCAGTCAGCGGCAGGATCGCGGTCGGGGATGCGTCAGGGGATTCAATTTCGGAGGCGACGAATGCCGGTGGCACGACTCGGGGGGAAGAGATCGGGGCGGATCATGGCGTGGGGGAGGATGCTGAGGAAGATAAGACTGAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATTAAAAAATACTATACAAAGTTGATGAAGGATATAGTGGAAGGAGGAGTATATGGCTATCCTGACTCATATCAACATAGGCTTCTCTTGGAGACTTCTTTTGCAATTCCAATCCTCGGTGTCTCTTTCTCTACTCATTCCAGTATTCTTGCCACAACTTCTTAA

Protein sequence

MAQSNEQEEGQSAAGSRSGMRQGIQFRRRRMPVARLGGKRSGRIMAWGRMLRKIRLRWVKLKCIAMVKKIKKYYTKLMKDIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHSSILATTS
Homology
BLAST of CcUC07G142390 vs. NCBI nr
Match: XP_038891072.1 (uncharacterized protein LOC120080455 [Benincasa hispida])

HSP 1 Score: 201.1 bits (510), Expect = 5.7e-48
Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0

Query: 1   MAQSNEQEEGQSAAGSRSGMRQGIQFRRRRMPVARLGGKRSGRIMAWGRMLRKIRLRWVK 60
           MAQS EQ EGQ AAG R GMR+GIQFRRRRMPVARLGGKRSGRI+AWGRMLRKIRLRWVK
Sbjct: 1   MAQSYEQGEGQPAAGLRWGMRRGIQFRRRRMPVARLGGKRSGRIVAWGRMLRKIRLRWVK 60

Query: 61  LKCIAMVKKIKKYYTKLMKDIVEGGVYGY-PDSYQHRLLLETSFAIPILGVSFSTHSSIL 120
           +KCIAMVKKIKKYYT LMKDI+EGG YGY  DSYQHRLL+ETSFAIPILGVS STHSSIL
Sbjct: 61  VKCIAMVKKIKKYYTSLMKDIMEGGAYGYAADSYQHRLLMETSFAIPILGVSLSTHSSIL 120

Query: 121 ATTS 124
           ATTS
Sbjct: 121 ATTS 124

BLAST of CcUC07G142390 vs. NCBI nr
Match: KAG6581768.1 (hypothetical protein SDJN03_21770, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 179.5 bits (454), Expect = 1.8e-41
Identity = 95/123 (77.24%), Postives = 107/123 (86.99%), Query Frame = 0

Query: 1   MAQSNEQEEGQSAAGSRSGMRQGIQFRRRRMPVARLGGKRSGRIMAWGRMLRKIRLRWVK 60
           M Q  E EEGQ  AG R G R+G++FRRRRMPVARLGGKRSGR++AWGRMLRKIRLRWVK
Sbjct: 1   MGQPYEPEEGQPGAGLRRGTRRGMRFRRRRMPVARLGGKRSGRLVAWGRMLRKIRLRWVK 60

Query: 61  LKCIAMVKKIKKYYTKLMKDIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHSSILA 120
           LKCIAMVKK+K+YYT+LMKDI+E G Y +  SYQHR+LLETSFAIPILGVS STHSS+LA
Sbjct: 61  LKCIAMVKKMKEYYTRLMKDIIEAGAYAH--SYQHRVLLETSFAIPILGVSLSTHSSVLA 120

Query: 121 TTS 124
            TS
Sbjct: 121 ATS 121

BLAST of CcUC07G142390 vs. NCBI nr
Match: XP_022956317.1 (uncharacterized protein LOC111458050 [Cucurbita moschata])

HSP 1 Score: 174.9 bits (442), Expect = 4.4e-40
Identity = 96/127 (75.59%), Postives = 107/127 (84.25%), Query Frame = 0

Query: 1   MAQSNEQEEGQSAA----GSRSGMRQGIQFRRRRMPVARLGGKRSGRIMAWGRMLRKIRL 60
           M Q  E EEGQ  A    G+R G R+G++FRRRRMPVARLGGKRSGR++AWGRMLRKIRL
Sbjct: 1   MGQPYEPEEGQPGAGLRRGTRRGTRRGMRFRRRRMPVARLGGKRSGRLVAWGRMLRKIRL 60

Query: 61  RWVKLKCIAMVKKIKKYYTKLMKDIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHS 120
           RWVKLKCIAMVKK+K+YYT+LMKDI+E G Y    SYQHRLLLETSFAIPILGVS STHS
Sbjct: 61  RWVKLKCIAMVKKMKEYYTRLMKDIIEAGAYA--RSYQHRLLLETSFAIPILGVSLSTHS 120

Query: 121 SILATTS 124
           S+LA TS
Sbjct: 121 SVLAATS 125

BLAST of CcUC07G142390 vs. NCBI nr
Match: KAG7018218.1 (hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 172.9 bits (437), Expect = 1.7e-39
Identity = 95/123 (77.24%), Postives = 104/123 (84.55%), Query Frame = 0

Query: 1   MAQSNEQEEGQSAAGSRSGMRQGIQFRRRRMPVARLGGKRSGRIMAWGRMLRKIRLRWVK 60
           M Q  E EEGQ  AG R GMR    FRRRRMPVARLGGKRSGR++AWGRMLRKIRLRWVK
Sbjct: 1   MGQPYEPEEGQPGAGLRRGMR----FRRRRMPVARLGGKRSGRLVAWGRMLRKIRLRWVK 60

Query: 61  LKCIAMVKKIKKYYTKLMKDIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHSSILA 120
           LKCIAMVKK+K+YYT+LMKDI+E G Y +  SYQHR+LLETSFAIPILGVS STHSS+LA
Sbjct: 61  LKCIAMVKKMKEYYTRLMKDIIEAGAYAH--SYQHRVLLETSFAIPILGVSLSTHSSVLA 117

Query: 121 TTS 124
            TS
Sbjct: 121 ATS 117

BLAST of CcUC07G142390 vs. NCBI nr
Match: XP_022948735.1 (uncharacterized protein LOC111452314 [Cucurbita moschata] >XP_023523769.1 uncharacterized protein LOC111787905 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 171.4 bits (433), Expect = 4.8e-39
Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0

Query: 1   MAQSNEQEEGQSA-AGSRSGMRQGIQFRRRRMPVARLGGKRSGRIMAWGRMLRKIRLRWV 60
           M QS+EQEEGQ A AG R   RQGIQFRRRRM VARLGGKRSGR++AWGR LRKIRLRWV
Sbjct: 1   MPQSSEQEEGQQAGAGLRWATRQGIQFRRRRMAVARLGGKRSGRLVAWGRRLRKIRLRWV 60

Query: 61  KLKCIAMVKKIKKYYTKLMKDIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHSSIL 120
           KLKCIAMVKK+KKY   LMKD++E G YG  DSYQHRLLLETSFAIPILGVSFSTHS+  
Sbjct: 61  KLKCIAMVKKVKKYCASLMKDMMEAGAYG--DSYQHRLLLETSFAIPILGVSFSTHSTHA 120

Query: 121 ATTS 124
           A ++
Sbjct: 121 AASA 122

BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1)

HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40
Identity = 96/127 (75.59%), Postives = 107/127 (84.25%), Query Frame = 0

Query: 1   MAQSNEQEEGQSAA----GSRSGMRQGIQFRRRRMPVARLGGKRSGRIMAWGRMLRKIRL 60
           M Q  E EEGQ  A    G+R G R+G++FRRRRMPVARLGGKRSGR++AWGRMLRKIRL
Sbjct: 1   MGQPYEPEEGQPGAGLRRGTRRGTRRGMRFRRRRMPVARLGGKRSGRLVAWGRMLRKIRL 60

Query: 61  RWVKLKCIAMVKKIKKYYTKLMKDIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHS 120
           RWVKLKCIAMVKK+K+YYT+LMKDI+E G Y    SYQHRLLLETSFAIPILGVS STHS
Sbjct: 61  RWVKLKCIAMVKKMKEYYTRLMKDIIEAGAYA--RSYQHRLLLETSFAIPILGVSLSTHS 120

Query: 121 SILATTS 124
           S+LA TS
Sbjct: 121 SVLAATS 125

BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A6J1GAR0 (uncharacterized protein LOC111452314 OS=Cucurbita moschata OX=3662 GN=LOC111452314 PE=4 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39
Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0

Query: 1   MAQSNEQEEGQSA-AGSRSGMRQGIQFRRRRMPVARLGGKRSGRIMAWGRMLRKIRLRWV 60
           M QS+EQEEGQ A AG R   RQGIQFRRRRM VARLGGKRSGR++AWGR LRKIRLRWV
Sbjct: 1   MPQSSEQEEGQQAGAGLRWATRQGIQFRRRRMAVARLGGKRSGRLVAWGRRLRKIRLRWV 60

Query: 61  KLKCIAMVKKIKKYYTKLMKDIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHSSIL 120
           KLKCIAMVKK+KKY   LMKD++E G YG  DSYQHRLLLETSFAIPILGVSFSTHS+  
Sbjct: 61  KLKCIAMVKKVKKYCASLMKDMMEAGAYG--DSYQHRLLLETSFAIPILGVSFSTHSTHA 120

Query: 121 ATTS 124
           A ++
Sbjct: 121 AASA 122

BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A5D3DCV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45855G00010 PE=4 SV=1)

HSP 1 Score: 163.3 bits (412), Expect = 6.4e-37
Identity = 84/100 (84.00%), Postives = 91/100 (91.00%), Query Frame = 0

Query: 21  RQGIQFRRRR-MPVARLGGKRSGRIMAWGRMLRKIRLRWVKLKCIAMVKKIKKYYTKLMK 80
           R GIQFRRRR M VARLGGKRSGRIMAWGR++RKIRL+WVK+KCI MVKK+KKYY KLMK
Sbjct: 14  RHGIQFRRRRKMAVARLGGKRSGRIMAWGRIVRKIRLKWVKMKCIEMVKKMKKYYKKLMK 73

Query: 81  DIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHSSIL 120
           DI+E G YGY DSYQHRLLLETSFAIPILGVS STHSSI+
Sbjct: 74  DIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSII 113

BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A0A0LBW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1)

HSP 1 Score: 158.3 bits (399), Expect = 2.1e-35
Identity = 83/104 (79.81%), Postives = 92/104 (88.46%), Query Frame = 0

Query: 21  RQGIQF-RRRRMPVARLGGKRSGRIMAWGRMLRKIRLRWVKLKCIAMVKKIKKYYTKLMK 80
           R GIQF RRRRM VARLGGKRSGRI+ WGR++RKIRL+WVK+KCI MVKK+KKYY +LMK
Sbjct: 14  RCGIQFRRRRRMAVARLGGKRSGRIVGWGRIVRKIRLKWVKMKCIEMVKKMKKYYKELMK 73

Query: 81  DIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHSSILATTS 124
           DI+E G YGY DSYQHRLLLETSFAIPILGVS STHSSI A T+
Sbjct: 74  DIMEAGAYGYADSYQHRLLLETSFAIPILGVSLSTHSSIHAATA 117

BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A6J1D3L4 (uncharacterized protein LOC111016963 OS=Momordica charantia OX=3673 GN=LOC111016963 PE=4 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23
Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = 0

Query: 2   AQSNEQEEGQSAAGSRSGMRQGIQF-RRRRMPVARLGGKRSGRIMA-WGRMLRKIRLRWV 61
           +Q  E  E ++  G R   R+GIQF RRRRMPVARLGG  SG      GRM+RKIR+RWV
Sbjct: 26  SQMGEGYETENGPGLRCAARRGIQFRRRRRMPVARLGGPGSGSGPGRLGRMVRKIRVRWV 85

Query: 62  KLKCIAMVKKIKKYYTKLMKDIVEG-GVYGYPDSYQHRLLLETSFAIPILGVSFSTH 116
           KL+C+AMVKK+KK+Y K++KD++E      YP+SYQHR+LLETSFAIPIL  S ST+
Sbjct: 86  KLRCLAMVKKMKKWYRKVLKDVIEAQAAVAYPESYQHRVLLETSFAIPILPRSLSTY 142

BLAST of CcUC07G142390 vs. TAIR 10
Match: AT1G54120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 64.3 bits (155), Expect = 7.8e-11
Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 0

Query: 18  SGMRQGIQFRRRRMPVARLGGKRSGRI---MAWGRMLRKIRLRWVKLKCIAMVKKIKKYY 77
           S  R+ I  RRR+  V RLGGK S       +  +M+R+++LRW+KL  + +VKKIK +Y
Sbjct: 14  SRSRRKIHIRRRKSQVVRLGGKNSAVSRGGFSLKKMVRRMKLRWLKLHYVRVVKKIKVFY 73

Query: 78  TKLMKDIVEGGVYGYPDSYQHRLLLE-TSFAIPILGVSFSTHS 117
             L+K+ V+ G     ++ Q R+ +E  +FA+P LG+SFS+ S
Sbjct: 74  RNLVKEFVDAG--AELEAIQQRMAVEAAAFAVPGLGLSFSSFS 114

BLAST of CcUC07G142390 vs. TAIR 10
Match: AT3G14060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.5 bits (132), Expect = 3.6e-08
Identity = 37/95 (38.95%), Postives = 59/95 (62.11%), Query Frame = 0

Query: 21  RQGIQFRRRRMPVARLGGKRSGRIMAWG--RMLRKIRLRWVKLKCIAMVKKIKKYYTKLM 80
           R+ I  RRR+  V RLGGK S    ++   +++ ++RL+W++L  + +VKKIK YY  ++
Sbjct: 20  RRKIYLRRRKPQVVRLGGKNSTPRGSFSLKKVVTRMRLKWLRLYYVRLVKKIKAYYRTIV 79

Query: 81  KDIVEGGVYGYPDSYQHRLLLET-SFAIPILGVSF 113
           K+  E G      + Q R+ +ET +FA P LG+SF
Sbjct: 80  KEFEEAGA----ATIQQRMTVETAAFAAPGLGLSF 110

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_038891072.15.7e-4887.90uncharacterized protein LOC120080455 [Benincasa hispida][more]
KAG6581768.11.8e-4177.24hypothetical protein SDJN03_21770, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022956317.14.4e-4075.59uncharacterized protein LOC111458050 [Cucurbita moschata][more]
KAG7018218.11.7e-3977.24hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyro... [more]
XP_022948735.14.8e-3977.42uncharacterized protein LOC111452314 [Cucurbita moschata] >XP_023523769.1 unchar... [more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1GVZ82.1e-4075.59uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC1114580... [more]
A0A6J1GAR02.3e-3977.42uncharacterized protein LOC111452314 OS=Cucurbita moschata OX=3662 GN=LOC1114523... [more]
A0A5D3DCV16.4e-3784.00Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A0A0LBW72.1e-3579.81Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1[more]
A0A6J1D3L41.4e-2359.83uncharacterized protein LOC111016963 OS=Momordica charantia OX=3673 GN=LOC111016... [more]
Match NameE-valueIdentityDescription
AT1G54120.17.8e-1140.78unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G14060.13.6e-0838.95unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..24
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..19
NoneNo IPR availablePANTHERPTHR34788F15I1.22coord: 1..118
NoneNo IPR availablePANTHERPTHR34788:SF4F15I1.22coord: 1..118

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CcUC07G142390.1CcUC07G142390.1mRNA