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CcUC07G142390 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAAAGCAATGAGCAGGAGGAAGGGCAGTCAGCGGCAGGATCGCGGTCGGGGATGCGTCAGGGGATTCAATTTCGGAGGCGACGAATGCCGGTGGCACGACTCGGGGGGAAGAGATCGGGGCGGATCATGGCGTGGGGGAGGATGCTGAGGAAGATAAGACTGAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATTAAAAAATACTATACAAAGTTGATGAAGGATATAGTGGAAGGAGGAGTATATGGCTATCCTGACTCATATCAACATAGGCTTCTCTTGGAGACTTCTTTTGCAATTCCAATCCTCGGTGTCTCTTTCTCTACTCATTCCAGTATTCTTGCCACAACTTCTTAA ATGGCTCAAAGCAATGAGCAGGAGGAAGGGCAGTCAGCGGCAGGATCGCGGTCGGGGATGCGTCAGGGGATTCAATTTCGGAGGCGACGAATGCCGGTGGCACGACTCGGGGGGAAGAGATCGGGGCGGATCATGGCGTGGGGGAGGATGCTGAGGAAGATAAGACTGAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATTAAAAAATACTATACAAAGTTGATGAAGGATATAGTGGAAGGAGGAGTATATGGCTATCCTGACTCATATCAACATAGGCTTCTCTTGGAGACTTCTTTTGCAATTCCAATCCTCGGTGTCTCTTTCTCTACTCATTCCAGTATTCTTGCCACAACTTCTTAA ATGGCTCAAAGCAATGAGCAGGAGGAAGGGCAGTCAGCGGCAGGATCGCGGTCGGGGATGCGTCAGGGGATTCAATTTCGGAGGCGACGAATGCCGGTGGCACGACTCGGGGGGAAGAGATCGGGGCGGATCATGGCGTGGGGGAGGATGCTGAGGAAGATAAGACTGAGATGGGTGAAACTGAAATGCATAGCCATGGTGAAGAAGATTAAAAAATACTATACAAAGTTGATGAAGGATATAGTGGAAGGAGGAGTATATGGCTATCCTGACTCATATCAACATAGGCTTCTCTTGGAGACTTCTTTTGCAATTCCAATCCTCGGTGTCTCTTTCTCTACTCATTCCAGTATTCTTGCCACAACTTCTTAA MAQSNEQEEGQSAAGSRSGMRQGIQFRRRRMPVARLGGKRSGRIMAWGRMLRKIRLRWVKLKCIAMVKKIKKYYTKLMKDIVEGGVYGYPDSYQHRLLLETSFAIPILGVSFSTHSSILATTS Homology
BLAST of CcUC07G142390 vs. NCBI nr
Match: XP_038891072.1 (uncharacterized protein LOC120080455 [Benincasa hispida]) HSP 1 Score: 201.1 bits (510), Expect = 5.7e-48 Identity = 109/124 (87.90%), Postives = 114/124 (91.94%), Query Frame = 0
BLAST of CcUC07G142390 vs. NCBI nr
Match: KAG6581768.1 (hypothetical protein SDJN03_21770, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 179.5 bits (454), Expect = 1.8e-41 Identity = 95/123 (77.24%), Postives = 107/123 (86.99%), Query Frame = 0
BLAST of CcUC07G142390 vs. NCBI nr
Match: XP_022956317.1 (uncharacterized protein LOC111458050 [Cucurbita moschata]) HSP 1 Score: 174.9 bits (442), Expect = 4.4e-40 Identity = 96/127 (75.59%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of CcUC07G142390 vs. NCBI nr
Match: KAG7018218.1 (hypothetical protein SDJN02_20086, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 172.9 bits (437), Expect = 1.7e-39 Identity = 95/123 (77.24%), Postives = 104/123 (84.55%), Query Frame = 0
BLAST of CcUC07G142390 vs. NCBI nr
Match: XP_022948735.1 (uncharacterized protein LOC111452314 [Cucurbita moschata] >XP_023523769.1 uncharacterized protein LOC111787905 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 171.4 bits (433), Expect = 4.8e-39 Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0
BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A6J1GVZ8 (uncharacterized protein LOC111458050 OS=Cucurbita moschata OX=3662 GN=LOC111458050 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 2.1e-40 Identity = 96/127 (75.59%), Postives = 107/127 (84.25%), Query Frame = 0
BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A6J1GAR0 (uncharacterized protein LOC111452314 OS=Cucurbita moschata OX=3662 GN=LOC111452314 PE=4 SV=1) HSP 1 Score: 171.4 bits (433), Expect = 2.3e-39 Identity = 96/124 (77.42%), Postives = 105/124 (84.68%), Query Frame = 0
BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A5D3DCV1 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold45855G00010 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 6.4e-37 Identity = 84/100 (84.00%), Postives = 91/100 (91.00%), Query Frame = 0
BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A0A0LBW7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G644780 PE=4 SV=1) HSP 1 Score: 158.3 bits (399), Expect = 2.1e-35 Identity = 83/104 (79.81%), Postives = 92/104 (88.46%), Query Frame = 0
BLAST of CcUC07G142390 vs. ExPASy TrEMBL
Match: A0A6J1D3L4 (uncharacterized protein LOC111016963 OS=Momordica charantia OX=3673 GN=LOC111016963 PE=4 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.4e-23 Identity = 70/117 (59.83%), Postives = 87/117 (74.36%), Query Frame = 0
BLAST of CcUC07G142390 vs. TAIR 10
Match: AT1G54120.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G14060.1); Has 23 Blast hits to 23 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 64.3 bits (155), Expect = 7.8e-11 Identity = 42/103 (40.78%), Postives = 65/103 (63.11%), Query Frame = 0
BLAST of CcUC07G142390 vs. TAIR 10
Match: AT3G14060.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G54120.1); Has 30 Blast hits to 30 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 30; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.5 bits (132), Expect = 3.6e-08 Identity = 37/95 (38.95%), Postives = 59/95 (62.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
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