CcUC07G140150 (gene) Watermelon (PI 537277) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GCTCCTTTCTGTAAAATGGGAATGCAATAGGAAAGGGGAAAGCAAAGACTTTAAAAGAACCTAACCCCAAAGAAATCAAATTCTTCTTCTTCTTCCTCCTCTTTCCCAACCAATCTCCTTAAACCCTAACCTCTTCCCTTGCGGATTTGCATCGGATTTGAATTTGGTGTTTCCTCCGTGGACGAAGGCCTTCTTTAGGATTAGCTTCTGCAAGCCACTACCCGGAGACCATGTCTGCTGTGGTGTGCGGTACCAAGAGATCCTTCTTTGAAGAACTTCCGCCTTCCCCTCCCATTGCCAAGCGCCTCCGCTGCTCCAATTCTACTTCTCCGATTCCATTCGCTGCCCCTTCTCATATTGATCACCTCCACCATTTGTTTCCCCACATGGACCATCAGGTTTCTTCTTTCTTCCTTTTGTTTCTAAATTCACTTTCGCTTCAATTTGATAAACTGTCATACTGAGATTGCTGGTTTTTTTTGTTTCCTGCGTTGCTTAGTTCCTACTTGTGTGTAATTTGATACTTCTTGATAGGATAGGATTATATACTGAATCTATATGGACCTTTTTACAATAGTTTTGGACCTTGGGGGGAATCATGTTATTCTCTTCTTGTGGATTGTGAAATACCAACTAACTTGAATTAGTTGCGGTATGAAATTGGAGTGGTTCTATTCAGTTTTGATTTGTAATGCATCTCTTTCGGTGTCTTGTTAGATAACTGCTGCACATGTATGTTATAATTAATATTAAGTTTGTTTTTTCCCCAAGGTTTTCTTTATCATGCTTTGATTTTGCCTTTCAGCTTCTTGTGAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAGAAGTCTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTACTACTGCAGAACCAGAGAAAAATTTGGATCAAGGTATCACTGAGTGCTAAGTAATGAAGGAGATGCTTCATACGTAGTTTCCTTGTTTCTGTTGGCTCATGATTTTAATTATATTATGACGATGAATTTCTTACATTCAAGATTAAAGTCCCCCTTCAAGGATTTGATGCATGTTTATTTCATAGAAGAGATCTAATGGGTCCCTGTCCCTATAACTTGCTGTCCCTAGTTTGGAATCCTAATTATACCCCTGCCTTGTGCGGGTTAGAGGAGGGTTTAAGTTTTGATTGAGACTTGAAAAGCAAGAAACAGAGTTCTCATTCACAGTACTATGTATCCATTATATTAGAATAAGATGTATTCTTTTCTCGTGTAAGAGACTAAATGCTTTGCTACCTACCCTCCTGTTTGTATTTTTGGTTATAAGCTTATGTTTACTGAATTGAATTGGCTGGTACATATACATAAACAGTTGGAAAAAAACCTTAAATCTGAATTTCTGGAGATAAAGCTGTATGAGGAGTTATAATCTTCTTTAATTCTTTTGTTATTGATGCTGTATTGCCCCTGATCGTTTTGTAATGTGCTTTTTTCTAGCCTGGACATTTATTTCTAGCTTTTCAGCACTATCTATCGTAATACGTTCTTTTTGGTTCTTTTGATGAAAATATATCTCTGTCTTTTGTTAAAAAAAAGCACTATCTATTGTAAAACTTTGATATTAATGTTGAACTTATCATACATCTTTTCTGCTGAAAGCACCGTTCTTAACCTTTTGTTGTTGGCCTTGAGCTTTTATCTTATTTCTTTTCTGAAAACATCAGTAATTCAGTGCACGTTTTATAAATTTGCAGGTTCATTTGCTAACAATGGAGAGGCTGCTGCTTCTGAGAATTGTTCAGCACCAAGCAGTGTTTCTCTTGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGATGAACGCTACCACGATAGCTGATGCTAAGACTCGTGCAGCAAGAGCACTAGAGGCATTAGAGAACTCAATTAGTGAACATGCTGGTGTTGATGCTGCAAAAAATTTCCACAAGGTACTTCAATTGTAGTGCCCACAACTGTAAAAAAGTTTCCACATCCTTGGGGGACAATTTTTGGATACTAATATGTTTACGGAGCATTTGAAAGCAGTTAGATTTGGTTTGGGCTTATTTGCTTGTTAAACATGCTATTGCTATAAAGTAATGATCCAGGCTTGTAAACTTATGTTCTTTTCACTCTCACTCAGGAAAATACGCAACTGAAGGAACAAATTGATGTACTTCTACGAGAAAATACAATTCTTAAGCAGGCGGTTGCCATACAACATGAGCGTCAGAAGGAATTTGAGGATAAGAATCTAGAGTTGCAGCACCTTAAACAGATGGTATCTCAATATCAGGAGCAGCTCAGAACCCTAGAGGTCAGAATAAATGTAGAACTATTTTAAGTTCTTCCCCAGTATTAACTGACCTGTTTTAATTTCTTAAACACGTTCATGTTGATGCAACTTTTCTGACCAGTTGAACAAAAATCCTGTCAATTTGTTACAGATAAACAATTATGCATTGACAATGCATTTGAAGCAGGCTCAACAAAGTAGCTCGATTCCAGGACGCTTCCATCCCGATGTCTTCTAGCAATGAGGAATTTTAAAGATCTAAATTATTGCTTGCAGAAAAGAAATAGTAGAGCGTGAGGGAGGAGGAAAAGGAAAAGCAGGAAGGAATGGAGCATGTTCATTACCGTCCTCAGTTTCCTATGAATAGAGGTACTGCTAATCAGTGTGTTTGTTTGTTTAGTTTGAGTTCGGTCCTATCGGACCTCTGTTGTGGAACTTCCATTGTTTCTCCCACAGCTTTCAATAAAAGTCTGTTCAATTTGGTGATTTCGTGGTTTTCATTACGATTTGAAGATGAAATCATAGTCATATTTTCTATAAACCCATTTGCAAAGCAATATAAATTGAAAACACAGAAGACGAGTTTCAGGCAGCATAATTGAGGTTATTATGTTTCCTCAATTATTCTGTCCGAAGAAAAGAAGGCAAGATGACATGCACTTTTGTCCTGGTTTTGCATTGGACATCGGTTTGTTCATATTGAGCACAGCTCGAGGATTTTGGCGGCCTTGTGCCTTATTTTTCTAAAATATGTTTTGGAAGTAACTTTTACTTTAAACTTCAATGCTTCAAATGTCTTGTCTGATGAAGGAATGATTTGTTAGTACTCTTTATACTGTGTGTGATCAGTGAGGTTTCTATTTCTTGGTATAAGAATCTTTTATTTTTACCGTTCCTGTGACAAAGACCCTTTATTTATTTATTGTTTATTTATTTATTTATTTATTTATTATTTTGTGTGTGTGTTTTAAAGGTAAAGCAGAGGGATCATTTGGCTTTCTTGATACTTGATAGTGGGTGAGTTGGTCTCCAAGGGGAACTCTTCATCAAATTCTATTCTTGTAAGTGGAAAATAATTGTATGTATAATGAGTGAGTAATTTATGAATGGAATGTTTGAAATGATTGCAGACGACTTTAGAACGAAGGTGTGGTATTTGTTATAGTAGCTAGACAATAGTGGCATATATTAAGTTCCAACTTAAAAAAATACCTATTTCTTATCATTTCTATATAGGTTGGCGAG GCTCCTTTCTGTAAAATGGGAATGCAATAGGAAAGGGGAAAGCAAAGACTTTAAAAGAACCTAACCCCAAAGAAATCAAATTCTTCTTCTTCTTCCTCCTCTTTCCCAACCAATCTCCTTAAACCCTAACCTCTTCCCTTGCGGATTTGCATCGGATTTGAATTTGGTGTTTCCTCCGTGGACGAAGGCCTTCTTTAGGATTAGCTTCTGCAAGCCACTACCCGGAGACCATGTCTGCTGTGGTGTGCGGTACCAAGAGATCCTTCTTTGAAGAACTTCCGCCTTCCCCTCCCATTGCCAAGCGCCTCCGCTGCTCCAATTCTACTTCTCCGATTCCATTCGCTGCCCCTTCTCATATTGATCACCTCCACCATTTGTTTCCCCACATGGACCATCAGCTTCTTGTGAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAGAAGTCTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTACTACTGCAGAACCAGAGAAAAATTTGGATCAAGGTTCATTTGCTAACAATGGAGAGGCTGCTGCTTCTGAGAATTGTTCAGCACCAAGCAGTGTTTCTCTTGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGATGAACGCTACCACGATAGCTGATGCTAAGACTCGTGCAGCAAGAGCACTAGAGGCATTAGAGAACTCAATTAGTGAACATGCTGGTGTTGATGCTGCAAAAAATTTCCACAAGGAAAATACGCAACTGAAGGAACAAATTGATGTACTTCTACGAGAAAATACAATTCTTAAGCAGGCGGTTGCCATACAACATGAGCGTCAGAAGGAATTTGAGGATAAGAATCTAGAGTTGCAGCACCTTAAACAGATGGTATCTCAATATCAGGAGCAGCTCAGAACCCTAGAGATAAACAATTATGCATTGACAATGCATTTGAAGCAGGCTCAACAAAGTAGCTCGATTCCAGGACGCTTCCATCCCGATGTCTTCTAGCAATGAGGAATTTTAAAGATCTAAATTATTGCTTGCAGAAAAGAAATAGTAGAGCGTGAGGGAGGAGGAAAAGGAAAAGCAGGAAGGAATGGAGCATGTTCATTACCGTCCTCAGTTTCCTATGAATAGAGGTAAAGCAGAGGGATCATTTGGCTTTCTTGATACTTGATAGTGGGTGAGTTGGTCTCCAAGGGGAACTCTTCATCAAATTCTATTCTTGTAAGTGGAAAATAATTGTATGTATAATGAGTGAGTAATTTATGAATGGAATGTTTGAAATGATTGCAGACGACTTTAGAACGAAGGTGTGGTATTTGTTATAGTAGCTAGACAATAGTGGCATATATTAAGTTCCAACTTAAAAAAATACCTATTTCTTATCATTTCTATATAGGTTGGCGAG ATGTCTGCTGTGGTGTGCGGTACCAAGAGATCCTTCTTTGAAGAACTTCCGCCTTCCCCTCCCATTGCCAAGCGCCTCCGCTGCTCCAATTCTACTTCTCCGATTCCATTCGCTGCCCCTTCTCATATTGATCACCTCCACCATTTGTTTCCCCACATGGACCATCAGCTTCTTGTGAGAGCCCTTGAAGAATGTGGCAACGACTTGGATGCTGCCATCAGAAGTCTGAGTGACCTGTGTTTGGGGTCTGCTGTTGAGAATCCTGTTACTACTGCAGAACCAGAGAAAAATTTGGATCAAGGTTCATTTGCTAACAATGGAGAGGCTGCTGCTTCTGAGAATTGTTCAGCACCAAGCAGTGTTTCTCTTGATGGTAGAAAATGGATTGACTTGTTTGTTGTGGAAATGATGAACGCTACCACGATAGCTGATGCTAAGACTCGTGCAGCAAGAGCACTAGAGGCATTAGAGAACTCAATTAGTGAACATGCTGGTGTTGATGCTGCAAAAAATTTCCACAAGGAAAATACGCAACTGAAGGAACAAATTGATGTACTTCTACGAGAAAATACAATTCTTAAGCAGGCGGTTGCCATACAACATGAGCGTCAGAAGGAATTTGAGGATAAGAATCTAGAGTTGCAGCACCTTAAACAGATGGTATCTCAATATCAGGAGCAGCTCAGAACCCTAGAGATAAACAATTATGCATTGACAATGCATTTGAAGCAGGCTCAACAAAGTAGCTCGATTCCAGGACGCTTCCATCCCGATGTCTTCTAG MSAVVCGTKRSFFEELPPSPPIAKRLRCSNSTSPIPFAAPSHIDHLHHLFPHMDHQLLVRALEECGNDLDAAIRSLSDLCLGSAVENPVTTAEPEKNLDQGSFANNGEAAASENCSAPSSVSLDGRKWIDLFVVEMMNATTIADAKTRAARALEALENSISEHAGVDAAKNFHKENTQLKEQIDVLLRENTILKQAVAIQHERQKEFEDKNLELQHLKQMVSQYQEQLRTLEINNYALTMHLKQAQQSSSIPGRFHPDVF Homology
BLAST of CcUC07G140150 vs. NCBI nr
Match: XP_023528958.1 (uncharacterized protein LOC111791720 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 449.1 bits (1154), Expect = 2.5e-122 Identity = 231/261 (88.51%), Postives = 246/261 (94.25%), Query Frame = 0
BLAST of CcUC07G140150 vs. NCBI nr
Match: XP_022955806.1 (uncharacterized protein LOC111457686 [Cucurbita moschata]) HSP 1 Score: 448.7 bits (1153), Expect = 3.3e-122 Identity = 231/261 (88.51%), Postives = 244/261 (93.49%), Query Frame = 0
BLAST of CcUC07G140150 vs. NCBI nr
Match: XP_023528850.1 (uncharacterized protein LOC111791655 isoform X1 [Cucurbita pepo subsp. pepo] >XP_023528851.1 uncharacterized protein LOC111791655 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 448.4 bits (1152), Expect = 4.3e-122 Identity = 231/261 (88.51%), Postives = 244/261 (93.49%), Query Frame = 0
BLAST of CcUC07G140150 vs. NCBI nr
Match: XP_022955509.1 (uncharacterized protein LOC111457514 [Cucurbita moschata]) HSP 1 Score: 448.4 bits (1152), Expect = 4.3e-122 Identity = 230/261 (88.12%), Postives = 246/261 (94.25%), Query Frame = 0
BLAST of CcUC07G140150 vs. NCBI nr
Match: KAG6581943.1 (hypothetical protein SDJN03_21945, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 447.2 bits (1149), Expect = 9.7e-122 Identity = 230/261 (88.12%), Postives = 243/261 (93.10%), Query Frame = 0
BLAST of CcUC07G140150 vs. ExPASy TrEMBL
Match: A0A6J1GUV7 (uncharacterized protein LOC111457686 OS=Cucurbita moschata OX=3662 GN=LOC111457686 PE=4 SV=1) HSP 1 Score: 448.7 bits (1153), Expect = 1.6e-122 Identity = 231/261 (88.51%), Postives = 244/261 (93.49%), Query Frame = 0
BLAST of CcUC07G140150 vs. ExPASy TrEMBL
Match: A0A6J1GWH1 (uncharacterized protein LOC111457514 OS=Cucurbita moschata OX=3662 GN=LOC111457514 PE=4 SV=1) HSP 1 Score: 448.4 bits (1152), Expect = 2.1e-122 Identity = 230/261 (88.12%), Postives = 246/261 (94.25%), Query Frame = 0
BLAST of CcUC07G140150 vs. ExPASy TrEMBL
Match: A0A6J1IXF9 (uncharacterized protein LOC111480055 OS=Cucurbita maxima OX=3661 GN=LOC111480055 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 2.3e-121 Identity = 229/261 (87.74%), Postives = 244/261 (93.49%), Query Frame = 0
BLAST of CcUC07G140150 vs. ExPASy TrEMBL
Match: A0A0A0KVN0 (CUE domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G006460 PE=4 SV=1) HSP 1 Score: 444.9 bits (1143), Expect = 2.3e-121 Identity = 232/260 (89.23%), Postives = 243/260 (93.46%), Query Frame = 0
BLAST of CcUC07G140150 vs. ExPASy TrEMBL
Match: A0A6J1IVE8 (uncharacterized protein LOC111479626 OS=Cucurbita maxima OX=3661 GN=LOC111479626 PE=4 SV=1) HSP 1 Score: 439.5 bits (1129), Expect = 9.8e-120 Identity = 227/261 (86.97%), Postives = 242/261 (92.72%), Query Frame = 0
BLAST of CcUC07G140150 vs. TAIR 10
Match: AT5G32440.3 (Ubiquitin system component Cue protein ) HSP 1 Score: 263.5 bits (672), Expect = 1.8e-70 Identity = 149/275 (54.18%), Postives = 198/275 (72.00%), Query Frame = 0
BLAST of CcUC07G140150 vs. TAIR 10
Match: AT5G32440.1 (Ubiquitin system component Cue protein ) HSP 1 Score: 262.3 bits (669), Expect = 4.1e-70 Identity = 148/275 (53.82%), Postives = 198/275 (72.00%), Query Frame = 0
BLAST of CcUC07G140150 vs. TAIR 10
Match: AT1G80040.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin system component Cue (InterPro:IPR003892); BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 198.0 bits (502), Expect = 9.5e-51 Identity = 117/262 (44.66%), Postives = 165/262 (62.98%), Query Frame = 0
BLAST of CcUC07G140150 vs. TAIR 10
Match: AT1G80040.3 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: Ubiquitin system component Cue protein (TAIR:AT5G32440.1). ) HSP 1 Score: 192.2 bits (487), Expect = 5.2e-49 Identity = 118/273 (43.22%), Postives = 166/273 (60.81%), Query Frame = 0
BLAST of CcUC07G140150 vs. TAIR 10
Match: AT5G32440.2 (Ubiquitin system component Cue protein ) HSP 1 Score: 143.7 bits (361), Expect = 2.1e-34 Identity = 90/190 (47.37%), Postives = 121/190 (63.68%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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