CcUC07G139500 (gene) Watermelon (PI 537277) v1

Overview


Name	CcUC07G139500
Type	gene
Organism	Citrullus colocynthis (Watermelon (PI 537277) v1)
Description	Tify domain-containing protein
Location	CicolChr07: 25640543 .. 25640965 (-)
RNA-Seq Expression	CcUC07G139500
Synteny	CcUC07G139500

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCCATTGTTGAACTCGATTTCTTCGCCATGGAAAATCAATCCACCGCCTCCAACTCCACTCTCTTTAGTCGCCAAAGAAGCCTCAAAGGTTCCTTCAAAAGAAGCCTCAAAGGTTCCTTCAACAACTCTCTGATCTTAATTTCTACAATCGTTTTTAATTTCCTCAAATGTGTGTTTTTAGGTTTACAAAAATTTACGCCATTCTACTGTTTCTACTCAGATATTCAGAGCGACATTTCCAAAATCAATCCTGCGATTCTCAAATCTCTAATCGTCTCTGGCTCTGCCGATCATCGTTCTGCTTTCACTATTCCGATTGCGATTTCTCGGAATTTTCCGAATCGGAGTCCTAATGGAGATCAGAATCCATCGACAGCACTGCCTGTTTATTCCGCCTCTACATCCAGGCAATTCTTCTAA

mRNA sequence

ATGTCCATTGTTGAACTCGATTTCTTCGCCATGGAAAATCAATCCACCGCCTCCAACTCCACTCTCTTTAGTCGCCAAAGAAGCCTCAAAGGTTTACAAAAATTTACGCCATTCTACTGTTTCTACTCAGATATTCAGAGCGACATTTCCAAAATCAATCCTGCGATTCTCAAATCTCTAATCGTCTCTGGCTCTGCCGATCATCGTTCTGCTTTCACTATTCCGATTGCGATTTCTCGGAATTTTCCGAATCGGAGTCCTAATGGAGATCAGAATCCATCGACAGCACTGCCTGTTTATTCCGCCTCTACATCCAGGCAATTCTTCTAA

Coding sequence (CDS)

ATGTCCATTGTTGAACTCGATTTCTTCGCCATGGAAAATCAATCCACCGCCTCCAACTCCACTCTCTTTAGTCGCCAAAGAAGCCTCAAAGGTTTACAAAAATTTACGCCATTCTACTGTTTCTACTCAGATATTCAGAGCGACATTTCCAAAATCAATCCTGCGATTCTCAAATCTCTAATCGTCTCTGGCTCTGCCGATCATCGTTCTGCTTTCACTATTCCGATTGCGATTTCTCGGAATTTTCCGAATCGGAGTCCTAATGGAGATCAGAATCCATCGACAGCACTGCCTGTTTATTCCGCCTCTACATCCAGGCAATTCTTCTAA

Protein sequence

MSIVELDFFAMENQSTASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPAILKSLIVSGSADHRSAFTIPIAISRNFPNRSPNGDQNPSTALPVYSASTSRQFF

Homology

[Close]

BLAST of CcUC07G139500 vs. NCBI nr
Match: XP_038905062.1 (protein TIFY 9-like [Benincasa hispida])

HSP 1 Score: 127.1 bits (318), Expect = 9.3e-26
Identity = 82/113 (72.57%), Postives = 82/113 (72.57%), Query Frame = 0


Query: 1   MSIVELDFFAMENQS--TASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPAILK 60
           MSIVELDFFAMENQS   ASNSTLF RQRSLK             DIQS ISKINPAILK
Sbjct: 1   MSIVELDFFAMENQSAAAASNSTLFRRQRSLK-------------DIQSAISKINPAILK 60

Query: 61  SLIVSGSADHR-SAFTIPIAISRNF----PNRSPNGDQNPSTALPVYSASTSR 107
           SLIVSGSADH  S FTIPIAI   F    P RSPNGDQN ST LPVYSASTSR
Sbjct: 61  SLIVSGSADHNPSDFTIPIAICPKFQSPPPYRSPNGDQNLSTPLPVYSASTSR 100

[Close]

BLAST of CcUC07G139500 vs. NCBI nr
Match: XP_008454115.1 (PREDICTED: protein TIFY 9-like [Cucumis melo])

HSP 1 Score: 121.7 bits (304), Expect = 3.9e-24
Identity = 76/111 (68.47%), Postives = 79/111 (71.17%), Query Frame = 0


Query: 1   MSIVELDFFAMENQS-----TASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPA 60
           MSIVELDFFAMENQS     TA+NSTLF RQRSLK             DIQS ISKINPA
Sbjct: 1   MSIVELDFFAMENQSSAAATTAANSTLFRRQRSLK-------------DIQSAISKINPA 60

Query: 61  ILKSLIVSGSADHRSAFTIPIAISRNFPNRSPNGDQNPSTALPVYSASTSR 107
           ILKSLIVSGS DHRS FT+P AIS  F  RSPN D+N  T LPVYSAS SR
Sbjct: 61  ILKSLIVSGSPDHRSDFTVPSAISPKF--RSPNSDRNLLTTLPVYSASESR 96

[Close]

BLAST of CcUC07G139500 vs. NCBI nr
Match: XP_031739596.1 (protein TIFY 9 isoform X2 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-23
Identity = 73/108 (67.59%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MSIVELDFFAMENQ--STASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPAILK 60
           MS VELDFFAMENQ  ST +NSTLF RQRS K             DIQS ISKINPAILK
Sbjct: 1   MSTVELDFFAMENQSSSTPANSTLFRRQRSFK-------------DIQSAISKINPAILK 60

Query: 61  SLIVSGSADHRSAFTIPIAISRNFPNRSPNGDQNPSTALPVYSASTSR 107
           SLIVSGSADH S FT+P AIS  F  RSPN D+N ST LPVYS S SR
Sbjct: 61  SLIVSGSADHHSDFTVPFAISPKF--RSPNSDRNLSTTLPVYSPSESR 93

[Close]

BLAST of CcUC07G139500 vs. NCBI nr
Match: XP_004152149.1 (protein TIFY 9 isoform X1 [Cucumis sativus] >KGN52987.1 hypothetical protein Csa_015337 [Cucumis sativus])

HSP 1 Score: 118.6 bits (296), Expect = 3.3e-23
Identity = 73/108 (67.59%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MSIVELDFFAMENQ--STASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPAILK 60
           MS VELDFFAMENQ  ST +NSTLF RQRS K             DIQS ISKINPAILK
Sbjct: 1   MSTVELDFFAMENQSSSTPANSTLFRRQRSFK-------------DIQSAISKINPAILK 60

Query: 61  SLIVSGSADHRSAFTIPIAISRNFPNRSPNGDQNPSTALPVYSASTSR 107
           SLIVSGSADH S FT+P AIS  F  RSPN D+N ST LPVYS S SR
Sbjct: 61  SLIVSGSADHHSDFTVPFAISPKF--RSPNSDRNLSTTLPVYSPSESR 93

[Close]

BLAST of CcUC07G139500 vs. NCBI nr
Match: KAG7018413.1 (Protein TIFY 9, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 95.1 bits (235), Expect = 3.9e-16
Identity = 63/112 (56.25%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 1   MSIVELDFFAMENQS--TASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPAILK 60
           MSIVELDFFAM+N+S  + SN TLF R RS K             DIQ  ISKINP ILK
Sbjct: 1   MSIVELDFFAMDNRSLNSDSNPTLFRRHRSFK-------------DIQGAISKINPEILK 60

Query: 61  SLIVSGSADHRSAFTIPIAISRNFP----NRSPNGDQNPSTALPVYSASTSR 107
           SLI SGS +H S F  P  I + FP    +R+PN DQN ST  PVYSA+TSR
Sbjct: 61  SLIASGSTEHSSDFATP--IPQKFPPLSLHRTPNVDQNLSTPPPVYSATTSR 97

[Close]

BLAST of CcUC07G139500 vs. ExPASy TrEMBL
Match: A0A1S3BYM2 (protein TIFY 9-like OS=Cucumis melo OX=3656 GN=LOC103494618 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 1.9e-24
Identity = 76/111 (68.47%), Postives = 79/111 (71.17%), Query Frame = 0


Query: 1   MSIVELDFFAMENQS-----TASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPA 60
           MSIVELDFFAMENQS     TA+NSTLF RQRSLK             DIQS ISKINPA
Sbjct: 1   MSIVELDFFAMENQSSAAATTAANSTLFRRQRSLK-------------DIQSAISKINPA 60

Query: 61  ILKSLIVSGSADHRSAFTIPIAISRNFPNRSPNGDQNPSTALPVYSASTSR 107
           ILKSLIVSGS DHRS FT+P AIS  F  RSPN D+N  T LPVYSAS SR
Sbjct: 61  ILKSLIVSGSPDHRSDFTVPSAISPKF--RSPNSDRNLLTTLPVYSASESR 96

[Close]

BLAST of CcUC07G139500 vs. ExPASy TrEMBL
Match: A0A0A0KX64 (Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G009880 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 1.6e-23
Identity = 73/108 (67.59%), Postives = 76/108 (70.37%), Query Frame = 0


Query: 1   MSIVELDFFAMENQ--STASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPAILK 60
           MS VELDFFAMENQ  ST +NSTLF RQRS K             DIQS ISKINPAILK
Sbjct: 1   MSTVELDFFAMENQSSSTPANSTLFRRQRSFK-------------DIQSAISKINPAILK 60

Query: 61  SLIVSGSADHRSAFTIPIAISRNFPNRSPNGDQNPSTALPVYSASTSR 107
           SLIVSGSADH S FT+P AIS  F  RSPN D+N ST LPVYS S SR
Sbjct: 61  SLIVSGSADHHSDFTVPFAISPKF--RSPNSDRNLSTTLPVYSPSESR 93

[Close]

BLAST of CcUC07G139500 vs. ExPASy TrEMBL
Match: A0A6J1IVD8 (protein TIFY 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479616 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.9e-16
Identity = 63/112 (56.25%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 1   MSIVELDFFAMENQS--TASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPAILK 60
           MSIVELDFFAM+N+S  + SN TLF R RS K             DIQ  ISKINP ILK
Sbjct: 1   MSIVELDFFAMDNRSLNSDSNPTLFRRHRSFK-------------DIQGAISKINPEILK 60

Query: 61  SLIVSGSADHRSAFTIPIAISRNFP----NRSPNGDQNPSTALPVYSASTSR 107
           SLI SGS +HRS F  P  I + FP    +R+P  DQN ST  PVYSA+TSR
Sbjct: 61  SLIASGSTEHRSDFATP--IPQKFPPLSLHRTPKVDQNLSTPPPVYSATTSR 97

[Close]

BLAST of CcUC07G139500 vs. ExPASy TrEMBL
Match: A0A6J1ISR6 (protein TIFY 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479616 PE=3 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 1.9e-16
Identity = 63/112 (56.25%), Postives = 71/112 (63.39%), Query Frame = 0


Query: 1   MSIVELDFFAMENQS--TASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPAILK 60
           MSIVELDFFAM+N+S  + SN TLF R RS K             DIQ  ISKINP ILK
Sbjct: 1   MSIVELDFFAMDNRSLNSDSNPTLFRRHRSFK-------------DIQGAISKINPEILK 60

Query: 61  SLIVSGSADHRSAFTIPIAISRNFP----NRSPNGDQNPSTALPVYSASTSR 107
           SLI SGS +HRS F  P  I + FP    +R+P  DQN ST  PVYSA+TSR
Sbjct: 61  SLIASGSTEHRSDFATP--IPQKFPPLSLHRTPKVDQNLSTPPPVYSATTSR 97

[Close]

BLAST of CcUC07G139500 vs. ExPASy TrEMBL
Match: A0A6J1GWT1 (protein TIFY 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457867 PE=3 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 2.1e-15
Identity = 61/112 (54.46%), Postives = 70/112 (62.50%), Query Frame = 0


Query: 1   MSIVELDFFAMENQS--TASNSTLFSRQRSLKGLQKFTPFYCFYSDIQSDISKINPAILK 60
           MS VELDFFAM+++S  + SN TLF R RS K             DIQ  ISKINP ILK
Sbjct: 1   MSFVELDFFAMDSRSLNSDSNPTLFRRHRSFK-------------DIQGAISKINPEILK 60

Query: 61  SLIVSGSADHRSAFTIPIAISRNFP----NRSPNGDQNPSTALPVYSASTSR 107
           SLI SGS +H S F  P  I + FP    +R+PN DQN ST  PVYSA+TSR
Sbjct: 61  SLIASGSTEHSSDFATP--IPQKFPPLSLHRTPNVDQNLSTPPPVYSATTSR 97

The following BLAST results are available for this feature:

BLAST of CcUC07G139500 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_038905062.1	9.3e-26	72.57	protein TIFY 9-like [Benincasa hispida]	[more]
XP_008454115.1	3.9e-24	68.47	PREDICTED: protein TIFY 9-like [Cucumis melo]	[more]
XP_031739596.1	3.3e-23	67.59	protein TIFY 9 isoform X2 [Cucumis sativus]	[more]
XP_004152149.1	3.3e-23	67.59	protein TIFY 9 isoform X1 [Cucumis sativus] >KGN52987.1 hypothetical protein Csa...	[more]
KAG7018413.1	3.9e-16	56.25	Protein TIFY 9, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]

BLAST of CcUC07G139500 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CcUC07G139500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3BYM2	1.9e-24	68.47	protein TIFY 9-like OS=Cucumis melo OX=3656 GN=LOC103494618 PE=3 SV=1	[more]
A0A0A0KX64	1.6e-23	67.59	Tify domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G009880 PE=3 S...	[more]
A0A6J1IVD8	1.9e-16	56.25	protein TIFY 9-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111479616 PE=3 ...	[more]
A0A6J1ISR6	1.9e-16	56.25	protein TIFY 9-like isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111479616 PE=3 ...	[more]
A0A6J1GWT1	2.1e-15	54.46	protein TIFY 9-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457867 PE=...	[more]

BLAST of CcUC07G139500 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Watermelon (PI 537277) v1
Date Performed: 2022-01-31


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 80..109

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CcUC07G139500.1	CcUC07G139500.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031347	regulation of defense response
biological_process	GO:2000022	regulation of jasmonic acid mediated signaling pathway
biological_process	GO:0009611	response to wounding
cellular_component	GO:0005634	nucleus